Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54479.t1 | XP_003626516.2 | 92.3 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 3.90E-61 | 243.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54479.t1 | Q9CQZ7 | 39.5 | 114 | 60 | 3 | 3 | 116 | 4 | 108 | 3.9e-17 | 89.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54479.t1 | G7L310 | 92.3 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 2.8e-61 | 243.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80957 | MS.gene54479 | PPI |
| MS.gene54479 | MS.gene56011 | PPI |
| MS.gene54479 | MS.gene08465 | PPI |
| MS.gene058216 | MS.gene54479 | PPI |
| MS.gene54479 | MS.gene027891 | PPI |
| MS.gene54479 | MS.gene004127 | PPI |
| MS.gene54479 | MS.gene036302 | PPI |
| MS.gene54479 | MS.gene64653 | PPI |
| MS.gene54479 | MS.gene049824 | PPI |
| MS.gene54479 | MS.gene050602 | PPI |
| MS.gene54479 | MS.gene65289 | PPI |
| MS.gene54479 | MS.gene024486 | PPI |
| MS.gene54479 | MS.gene26950 | PPI |
| MS.gene54479 | MS.gene22836 | PPI |
| MS.gene54479 | MS.gene81051 | PPI |
| MS.gene54479 | MS.gene004126 | PPI |
| MS.gene54479 | MS.gene025949 | PPI |
| MS.gene54479 | MS.gene058216 | PPI |
| MS.gene54479 | MS.gene27326 | PPI |
| MS.gene54479 | MS.gene24295 | PPI |
| MS.gene54479 | MS.gene049822 | PPI |
| MS.gene54479 | MS.gene051008 | PPI |
| MS.gene90078 | MS.gene54479 | PPI |
| MS.gene025949 | MS.gene54479 | PPI |
| MS.gene00182 | MS.gene54479 | PPI |
| MS.gene54479 | MS.gene00182 | PPI |
| MS.gene024486 | MS.gene54479 | PPI |
| MS.gene54479 | MS.gene65249 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54479.t1 | MTR_7g116750 | 92.308 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 8.99e-81 | 232 |
| MS.gene54479.t1 | MTR_5g030180 | 89.655 | 116 | 11 | 1 | 1 | 116 | 14 | 128 | 7.81e-75 | 218 |
| MS.gene54479.t1 | MTR_5g030180 | 89.655 | 116 | 11 | 1 | 1 | 116 | 1 | 115 | 1.04e-74 | 217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54479.t1 | AT4G07950 | 43.103 | 116 | 55 | 4 | 1 | 116 | 1 | 105 | 2.17e-28 | 100 |
| MS.gene54479.t1 | AT1G01210 | 42.241 | 116 | 56 | 4 | 1 | 116 | 1 | 105 | 2.48e-27 | 97.4 |
| MS.gene54479.t1 | AT1G01210 | 42.241 | 116 | 56 | 4 | 1 | 116 | 1 | 105 | 2.48e-27 | 97.4 |
| MS.gene54479.t1 | AT1G01210 | 42.241 | 116 | 56 | 4 | 1 | 116 | 1 | 105 | 2.48e-27 | 97.4 |
| MS.gene54479.t1 | AT3G25940 | 29.839 | 124 | 63 | 5 | 3 | 117 | 11 | 119 | 9.15e-11 | 55.1 |
Find 38 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGAGGATGGCGACAATT+TGG | 0.237510 | 7.4:+92025039 | None:intergenic |
| ATTTCATCATGGGAGATAAT+AGG | 0.283528 | 7.4:+92026245 | None:intergenic |
| GTCCTGATTGGGCAAATATA+TGG | 0.298301 | 7.4:+92026423 | None:intergenic |
| CACTCGTAAAATATTGTTGC+AGG | 0.321821 | 7.4:+92024979 | None:intergenic |
| CTTGAGGATGGCGACAATTT+GGG | 0.324696 | 7.4:+92025040 | None:intergenic |
| GTCCATATATTTGCCCAATC+AGG | 0.365575 | 7.4:-92026425 | MS.gene54479:CDS |
| TTTCATCATGGGAGATAATA+GGG | 0.399931 | 7.4:+92026246 | None:intergenic |
| TAACATACCCCTGTCCTGAT+TGG | 0.407408 | 7.4:+92026411 | None:intergenic |
| AAAGTAGTACCGTCGGCTTT+TGG | 0.414427 | 7.4:+92026209 | None:intergenic |
| AACATACCCCTGTCCTGATT+GGG | 0.444565 | 7.4:+92026412 | None:intergenic |
| TTTATCCCTCCTTCCACTTG+TGG | 0.445466 | 7.4:+92024938 | None:intergenic |
| ATTCTTGTTGATTTCATCAT+GGG | 0.448511 | 7.4:+92026235 | None:intergenic |
| TATTCTTGTTGATTTCATCA+TGG | 0.453333 | 7.4:+92026234 | None:intergenic |
| GTGCCGTGACTCGTAGTATT+GGG | 0.460519 | 7.4:+92026480 | None:intergenic |
| AGAGAAGGCAAATGCTCGTC+AGG | 0.467028 | 7.4:-92026280 | MS.gene54479:CDS |
| TGTGCCGTGACTCGTAGTAT+TGG | 0.489174 | 7.4:+92026479 | None:intergenic |
| GGCAAATGCTCGTCAGGAAA+GGG | 0.498231 | 7.4:-92026274 | MS.gene54479:CDS |
| TATATTTGCCCAATCAGGAC+AGG | 0.517313 | 7.4:-92026420 | MS.gene54479:CDS |
| GTGAGGCAATAAAACCTTGT+GGG | 0.529652 | 7.4:+92026450 | None:intergenic |
| AGGCAAATGCTCGTCAGGAA+AGG | 0.543690 | 7.4:-92026275 | MS.gene54479:CDS |
| TCAGCATGCTCCCACACATA+GGG | 0.562374 | 7.4:+92026514 | None:intergenic |
| ATCAAAAGTGTGGCCACAAG+TGG | 0.562650 | 7.4:-92024951 | MS.gene54479:CDS |
| ATCAGCATGCTCCCACACAT+AGG | 0.581470 | 7.4:+92026513 | None:intergenic |
| GGATGGCGACAATTTGGGCA+TGG | 0.583454 | 7.4:+92025045 | None:intergenic |
| TACAGGTTAAGATTAAGAGA+AGG | 0.585633 | 7.4:-92026295 | MS.gene54479:intron |
| TGTGGCCACAAGTGGAAGGA+GGG | 0.590514 | 7.4:-92024943 | MS.gene54479:CDS |
| TGTTATAACTAGCTTGAGGA+TGG | 0.611096 | 7.4:+92025028 | None:intergenic |
| GTGTGGCCACAAGTGGAAGG+AGG | 0.613594 | 7.4:-92024944 | MS.gene54479:CDS |
| AAAGTGTGGCCACAAGTGGA+AGG | 0.625563 | 7.4:-92024947 | MS.gene54479:CDS |
| ATATTTGCCCAATCAGGACA+GGG | 0.626623 | 7.4:-92026419 | MS.gene54479:CDS |
| TTACCCAATACTACGAGTCA+CGG | 0.630549 | 7.4:-92026483 | MS.gene54479:CDS |
| GGCAAATATATGGACAAGTG+AGG | 0.649591 | 7.4:+92026433 | None:intergenic |
| AAGAATAAACCAAAAGCCGA+CGG | 0.660260 | 7.4:-92026218 | MS.gene54479:intron |
| AGTGAGGCAATAAAACCTTG+TGG | 0.661965 | 7.4:+92026449 | None:intergenic |
| TGCATGTTATAACTAGCTTG+AGG | 0.674563 | 7.4:+92025024 | None:intergenic |
| GAGTGCATGAATCAAAAGTG+TGG | 0.693654 | 7.4:-92024961 | MS.gene54479:CDS |
| TATTTGCCCAATCAGGACAG+GGG | 0.710769 | 7.4:-92026418 | MS.gene54479:intron |
| ACGGCACATCTCATCCCACA+AGG | 0.717130 | 7.4:-92026464 | MS.gene54479:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAGTATTACAAAAATT+AGG | + | chr7.4:92026262-92026281 | None:intergenic | 15.0% |
| !! | AAACAGTATTACAAAAATTA+GGG | + | chr7.4:92026261-92026280 | None:intergenic | 15.0% |
| !! | TTAAACCTTGAAAATATATT+AGG | + | chr7.4:92025599-92025618 | None:intergenic | 15.0% |
| !!! | AATCCAACTTTTTAAAAAAA+CGG | + | chr7.4:92026187-92026206 | None:intergenic | 15.0% |
| !!! | TGTCTTTTTTTAATGATTTA+CGG | - | chr7.4:92026058-92026077 | MS.gene54479:intron | 15.0% |
| !! | AACAGTATTACAAAAATTAG+GGG | + | chr7.4:92026260-92026279 | None:intergenic | 20.0% |
| !! | AATTAACATTGTTTATGGTT+CGG | - | chr7.4:92025964-92025983 | MS.gene54479:intron | 20.0% |
| !! | TAAACTCAAAAGTTTCTATT+AGG | + | chr7.4:92025850-92025869 | None:intergenic | 20.0% |
| !! | TCTGAAGATAATCAATATTT+GGG | - | chr7.4:92025444-92025463 | MS.gene54479:intron | 20.0% |
| !!! | TAACTAATTGGTAATAGAAA+TGG | + | chr7.4:92025102-92025121 | None:intergenic | 20.0% |
| !!! | TAATACTGTTTTGTTCTTTT+TGG | - | chr7.4:92026270-92026289 | MS.gene54479:CDS | 20.0% |
| !!! | TGTAATACTGTTTTTGTTAA+CGG | - | chr7.4:92026300-92026319 | MS.gene54479:intron | 20.0% |
| ! | AACTAGGAGGAAAAAAAAAA+GGG | + | chr7.4:92026399-92026418 | None:intergenic | 25.0% |
| ! | AAGAAAGAAAGATGAATTGA+AGG | + | chr7.4:92025129-92025148 | None:intergenic | 25.0% |
| ! | ATGGAAATAACAAAGAAACA+AGG | + | chr7.4:92026346-92026365 | None:intergenic | 25.0% |
| ! | ATTGAAGGTAACTAACTAAT+TGG | + | chr7.4:92025114-92025133 | None:intergenic | 25.0% |
| ! | CATATCAAATTTCTGTGATT+TGG | - | chr7.4:92025699-92025718 | MS.gene54479:intron | 25.0% |
| ! | CTTTAGTCAATAAGATAAGA+GGG | + | chr7.4:92025475-92025494 | None:intergenic | 25.0% |
| ! | GAGAAGGAAAAAAATAGTAA+TGG | + | chr7.4:92026365-92026384 | None:intergenic | 25.0% |
| ! | TCTTTAGTCAATAAGATAAG+AGG | + | chr7.4:92025476-92025495 | None:intergenic | 25.0% |
| ! | TTTAGTCAATAAGATAAGAG+GGG | + | chr7.4:92025474-92025493 | None:intergenic | 25.0% |
| !! | AACTGATTGTACTAGTTTAT+TGG | - | chr7.4:92025383-92025402 | MS.gene54479:intron | 25.0% |
| !! | CATGTAAAAGAAAAGCATAA+TGG | + | chr7.4:92025915-92025934 | None:intergenic | 25.0% |
| !! | CTCTGAAGATAATCAATATT+TGG | - | chr7.4:92025443-92025462 | MS.gene54479:intron | 25.0% |
| !! | GGTAACCTAATATATTTTCA+AGG | - | chr7.4:92025591-92025610 | MS.gene54479:intron | 25.0% |
| !!! | ATTCTTGTTGATTTCATCAT+GGG | + | chr7.4:92025232-92025251 | None:intergenic | 25.0% |
| !!! | CATCATGTTTTTTACTTTAC+AGG | - | chr7.4:92025152-92025171 | MS.gene54479:intron | 25.0% |
| !!! | TATTCTTGTTGATTTCATCA+TGG | + | chr7.4:92025233-92025252 | None:intergenic | 25.0% |
| !!! | TGTCCGTTTTTTTAAAAAGT+TGG | - | chr7.4:92026181-92026200 | MS.gene54479:intron | 25.0% |
| !!! | TTATGGTTTTCTTATTTGAG+CGG | - | chr7.4:92026112-92026131 | MS.gene54479:intron | 25.0% |
| ACTAGGAGGAAAAAAAAAAG+GGG | + | chr7.4:92026398-92026417 | None:intergenic | 30.0% | |
| ATCTAATGCAAAGGGATATA+TGG | - | chr7.4:92025517-92025536 | MS.gene54479:intron | 30.0% | |
| ATTTCATCATGGGAGATAAT+AGG | + | chr7.4:92025222-92025241 | None:intergenic | 30.0% | |
| CGACGAATTAACATTGTTTA+TGG | - | chr7.4:92025959-92025978 | MS.gene54479:intron | 30.0% | |
| GAACTAGGAGGAAAAAAAAA+AGG | + | chr7.4:92026400-92026419 | None:intergenic | 30.0% | |
| TACAGGTTAAGATTAAGAGA+AGG | - | chr7.4:92025169-92025188 | MS.gene54479:intron | 30.0% | |
| TATCAGACAGCTTATATACA+TGG | + | chr7.4:92025664-92025683 | None:intergenic | 30.0% | |
| TCGCGAATTAACATTGTTTA+TGG | - | chr7.4:92026095-92026114 | MS.gene54479:intron | 30.0% | |
| TCTAATGCAAAGGGATATAT+GGG | - | chr7.4:92025518-92025537 | MS.gene54479:intron | 30.0% | |
| TGAATGTGATCTAATGCAAA+GGG | - | chr7.4:92025509-92025528 | MS.gene54479:intron | 30.0% | |
| TTACATGATTACTGTTTGAG+CGG | - | chr7.4:92025928-92025947 | MS.gene54479:intron | 30.0% | |
| TTGAATGTGATCTAATGCAA+AGG | - | chr7.4:92025508-92025527 | MS.gene54479:intron | 30.0% | |
| TTTCATCATGGGAGATAATA+GGG | + | chr7.4:92025221-92025240 | None:intergenic | 30.0% | |
| ! | AAGTATTGCTCACTTAGATT+TGG | + | chr7.4:92025638-92025657 | None:intergenic | 30.0% |
| ! | TTATGAGCTTTTGTGAAGTA+GGG | - | chr7.4:92025754-92025773 | MS.gene54479:intron | 30.0% |
| ! | TTTATGAGCTTTTGTGAAGT+AGG | - | chr7.4:92025753-92025772 | MS.gene54479:intron | 30.0% |
| !! | ATTTCTGTGATTTGGTTTCA+AGG | - | chr7.4:92025707-92025726 | MS.gene54479:intron | 30.0% |
| !!! | TATTTTTTCTAGCACTGTTG+AGG | - | chr7.4:92025570-92025589 | MS.gene54479:intron | 30.0% |
| AAGAATAAACCAAAAGCCGA+CGG | - | chr7.4:92025246-92025265 | MS.gene54479:intron | 35.0% | |
| AAGTAGGGAATTAGAAGTTG+TGG | - | chr7.4:92025769-92025788 | MS.gene54479:intron | 35.0% | |
| CACTCGTAAAATATTGTTGC+AGG | + | chr7.4:92026488-92026507 | None:intergenic | 35.0% | |
| CTAATGCAAAGGGATATATG+GGG | - | chr7.4:92025519-92025538 | MS.gene54479:intron | 35.0% | |
| CTAGGAGGAAAAAAAAAAGG+GGG | + | chr7.4:92026397-92026416 | None:intergenic | 35.0% | |
| GGTGATAGTTATTAGTCATG+TGG | + | chr7.4:92026239-92026258 | None:intergenic | 35.0% | |
| ! | TCATTGTGGACTTGTTTACT+TGG | - | chr7.4:92025321-92025340 | MS.gene54479:intron | 35.0% |
| ! | TGAGTTTGCTTGTTTCAGTT+TGG | - | chr7.4:92025808-92025827 | MS.gene54479:intron | 35.0% |
| ! | TGCATGTTATAACTAGCTTG+AGG | + | chr7.4:92026443-92026462 | None:intergenic | 35.0% |
| ! | TGTACTAGTTTATTGGACGT+TGG | - | chr7.4:92025390-92025409 | MS.gene54479:intron | 35.0% |
| ! | TGTTATAACTAGCTTGAGGA+TGG | + | chr7.4:92026439-92026458 | None:intergenic | 35.0% |
| !!! | GTTCAACCACTGTTTTGTTT+TGG | - | chr7.4:92026134-92026153 | MS.gene54479:intron | 35.0% |
| AGCAAGACAAACTTGGTACA+AGG | + | chr7.4:92025877-92025896 | None:intergenic | 40.0% | |
| AGTCCACAATGAGCTAAAGA+AGG | + | chr7.4:92025313-92025332 | None:intergenic | 40.0% | |
| AGTGAGGCAATAAAACCTTG+TGG | + | chr7.4:92025018-92025037 | None:intergenic | 40.0% | |
| ATATTTGCCCAATCAGGACA+GGG | - | chr7.4:92025045-92025064 | MS.gene54479:CDS | 40.0% | |
| CTCGAACCAAAACAAAACAG+TGG | + | chr7.4:92026143-92026162 | None:intergenic | 40.0% | |
| GAGTGCATGAATCAAAAGTG+TGG | - | chr7.4:92026503-92026522 | MS.gene54479:CDS | 40.0% | |
| GATGAACAGCAAGACAAACT+TGG | + | chr7.4:92025884-92025903 | None:intergenic | 40.0% | |
| GGCAAATATATGGACAAGTG+AGG | + | chr7.4:92025034-92025053 | None:intergenic | 40.0% | |
| GTCCATATATTTGCCCAATC+AGG | - | chr7.4:92025039-92025058 | MS.gene54479:CDS | 40.0% | |
| GTCCTGATTGGGCAAATATA+TGG | + | chr7.4:92025044-92025063 | None:intergenic | 40.0% | |
| GTGAGGCAATAAAACCTTGT+GGG | + | chr7.4:92025017-92025036 | None:intergenic | 40.0% | |
| TATATTTGCCCAATCAGGAC+AGG | - | chr7.4:92025044-92025063 | MS.gene54479:CDS | 40.0% | |
| TGTGAGAAAAGTAGTACCGT+CGG | + | chr7.4:92025265-92025284 | None:intergenic | 40.0% | |
| TTACCCAATACTACGAGTCA+CGG | - | chr7.4:92024981-92025000 | MS.gene54479:CDS | 40.0% | |
| ! | CATCCTTCTTTAGCTCATTG+TGG | - | chr7.4:92025307-92025326 | MS.gene54479:intron | 40.0% |
| ! | TGGGGCTTTAGTTTAGTGTA+AGG | - | chr7.4:92025537-92025556 | MS.gene54479:intron | 40.0% |
| !! | CTGTGATTTGGTTTCAAGGA+CGG | - | chr7.4:92025711-92025730 | MS.gene54479:intron | 40.0% |
| !!! | CTGTTTTGTTTTGGTTCGAG+CGG | - | chr7.4:92026143-92026162 | MS.gene54479:intron | 40.0% |
| AACATACCCCTGTCCTGATT+GGG | + | chr7.4:92025055-92025074 | None:intergenic | 45.0% | |
| AATTTGGGCATGGAACTAGG+AGG | + | chr7.4:92026412-92026431 | None:intergenic | 45.0% | |
| CTTGAGGATGGCGACAATTT+GGG | + | chr7.4:92026427-92026446 | None:intergenic | 45.0% | |
| GACAATTTGGGCATGGAACT+AGG | + | chr7.4:92026415-92026434 | None:intergenic | 45.0% | |
| GGGAATTAGAAGTTGTGGTC+TGG | - | chr7.4:92025774-92025793 | MS.gene54479:intron | 45.0% | |
| TAACATACCCCTGTCCTGAT+TGG | + | chr7.4:92025056-92025075 | None:intergenic | 45.0% | |
| TATTTGCCCAATCAGGACAG+GGG | - | chr7.4:92025046-92025065 | MS.gene54479:CDS | 45.0% | |
| ! | ATCAAAAGTGTGGCCACAAG+TGG | - | chr7.4:92026513-92026532 | MS.gene54479:CDS | 45.0% |
| ! | ATGGAGTTTTGCCCTATGTG+TGG | - | chr7.4:92024939-92024958 | MS.gene54479:CDS | 45.0% |
| ! | GTTCAACCACCGTTTTGTCT+AGG | - | chr7.4:92025998-92026017 | MS.gene54479:intron | 45.0% |
| ! | TGGAGTTTTGCCCTATGTGT+GGG | - | chr7.4:92024940-92024959 | MS.gene54479:CDS | 45.0% |
| !!! | AAAGTAGTACCGTCGGCTTT+TGG | + | chr7.4:92025258-92025277 | None:intergenic | 45.0% |
| AAAGTGTGGCCACAAGTGGA+AGG | - | chr7.4:92026517-92026536 | MS.gene54479:CDS | 50.0% | |
| AAGGGGGAATGAGTGAGAGA+AGG | + | chr7.4:92026381-92026400 | None:intergenic | 50.0% | |
| AGAGAAGGCAAATGCTCGTC+AGG | - | chr7.4:92025184-92025203 | MS.gene54479:intron | 50.0% | |
| AGGCAAATGCTCGTCAGGAA+AGG | - | chr7.4:92025189-92025208 | MS.gene54479:intron | 50.0% | |
| ATCAGCATGCTCCCACACAT+AGG | + | chr7.4:92024954-92024973 | None:intergenic | 50.0% | |
| CCGCTCGAACCTAGACAAAA+CGG | + | chr7.4:92026010-92026029 | None:intergenic | 50.0% | |
| CTCGAACCTAGACAAAACGG+TGG | + | chr7.4:92026007-92026026 | None:intergenic | 50.0% | |
| GCTTGAGGATGGCGACAATT+TGG | + | chr7.4:92026428-92026447 | None:intergenic | 50.0% | |
| GGCAAATGCTCGTCAGGAAA+GGG | - | chr7.4:92025190-92025209 | MS.gene54479:intron | 50.0% | |
| GTGCCGTGACTCGTAGTATT+GGG | + | chr7.4:92024987-92025006 | None:intergenic | 50.0% | |
| TCAGCATGCTCCCACACATA+GGG | + | chr7.4:92024953-92024972 | None:intergenic | 50.0% | |
| TGTGCCGTGACTCGTAGTAT+TGG | + | chr7.4:92024988-92025007 | None:intergenic | 50.0% | |
| ! | CCGTTTTGTCTAGGTTCGAG+CGG | - | chr7.4:92026007-92026026 | MS.gene54479:intron | 50.0% |
| ACGGCACATCTCATCCCACA+AGG | - | chr7.4:92025000-92025019 | MS.gene54479:CDS | 55.0% | |
| GGATGGCGACAATTTGGGCA+TGG | + | chr7.4:92026422-92026441 | None:intergenic | 55.0% | |
| TGTGGCCACAAGTGGAAGGA+GGG | - | chr7.4:92026521-92026540 | MS.gene54479:CDS | 55.0% | |
| GTGTGGCCACAAGTGGAAGG+AGG | - | chr7.4:92026520-92026539 | MS.gene54479:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 92024939 | 92026547 | 92024939 | ID=MS.gene54479 |
| chr7.4 | mRNA | 92024939 | 92026547 | 92024939 | ID=MS.gene54479.t1;Parent=MS.gene54479 |
| chr7.4 | exon | 92026419 | 92026547 | 92026419 | ID=MS.gene54479.t1.exon1;Parent=MS.gene54479.t1 |
| chr7.4 | CDS | 92026419 | 92026547 | 92026419 | ID=cds.MS.gene54479.t1;Parent=MS.gene54479.t1 |
| chr7.4 | exon | 92026219 | 92026312 | 92026219 | ID=MS.gene54479.t1.exon2;Parent=MS.gene54479.t1 |
| chr7.4 | CDS | 92026219 | 92026312 | 92026219 | ID=cds.MS.gene54479.t1;Parent=MS.gene54479.t1 |
| chr7.4 | exon | 92024939 | 92025069 | 92024939 | ID=MS.gene54479.t1.exon3;Parent=MS.gene54479.t1 |
| chr7.4 | CDS | 92024939 | 92025069 | 92024939 | ID=cds.MS.gene54479.t1;Parent=MS.gene54479.t1 |
| Gene Sequence |
| Protein sequence |
