Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22836.t1 | XP_003626516.2 | 92.3 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.50E-60 | 241.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22836.t1 | Q9CQZ7 | 39.5 | 114 | 60 | 3 | 3 | 116 | 4 | 108 | 3.9e-17 | 89.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22836.t1 | G7L310 | 92.3 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.1e-60 | 241.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050602 | MS.gene22836 | 0.819565 | 1.09E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22836 | MS.gene049824 | PPI |
| MS.gene90078 | MS.gene22836 | PPI |
| MS.gene22836 | MS.gene24295 | PPI |
| MS.gene004126 | MS.gene22836 | PPI |
| MS.gene22836 | MS.gene049822 | PPI |
| MS.gene22836 | MS.gene26950 | PPI |
| MS.gene024486 | MS.gene22836 | PPI |
| MS.gene22836 | MS.gene051008 | PPI |
| MS.gene22836 | MS.gene81051 | PPI |
| MS.gene004127 | MS.gene22836 | PPI |
| MS.gene22836 | MS.gene27326 | PPI |
| MS.gene54479 | MS.gene22836 | PPI |
| MS.gene80957 | MS.gene22836 | PPI |
| MS.gene025949 | MS.gene22836 | PPI |
| MS.gene00182 | MS.gene22836 | PPI |
| MS.gene22836 | MS.gene08465 | PPI |
| MS.gene22836 | MS.gene027891 | PPI |
| MS.gene058216 | MS.gene22836 | PPI |
| MS.gene22836 | MS.gene036302 | PPI |
| MS.gene22836 | MS.gene64653 | PPI |
| MS.gene22836 | MS.gene050602 | PPI |
| MS.gene22836 | MS.gene65249 | PPI |
| MS.gene22836 | MS.gene65289 | PPI |
| MS.gene22836 | MS.gene56011 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22836.t1 | MTR_7g116750 | 92.308 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.43e-79 | 229 |
| MS.gene22836.t1 | MTR_5g030180 | 87.069 | 116 | 14 | 1 | 1 | 116 | 14 | 128 | 7.92e-73 | 213 |
| MS.gene22836.t1 | MTR_5g030180 | 87.069 | 116 | 14 | 1 | 1 | 116 | 1 | 115 | 8.98e-73 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22836.t1 | AT4G07950 | 43.966 | 116 | 54 | 4 | 1 | 116 | 1 | 105 | 7.70e-29 | 100 |
| MS.gene22836.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
| MS.gene22836.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
| MS.gene22836.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
Find 37 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGAGGATGGCGACAATT+TGG | 0.237510 | 7.4:-1515863 | None:intergenic |
| ATTTCATCATGGGAGATAAT+AGG | 0.283528 | 7.4:-1514354 | None:intergenic |
| GCCTGGATTGGGCAAATATA+TGG | 0.304407 | 7.4:-1514183 | None:intergenic |
| CTTGAGGATGGCGACAATTT+GGG | 0.324696 | 7.4:-1515862 | None:intergenic |
| CACTCGTAAAATATTGTTGC+AGG | 0.338187 | 7.4:-1515923 | None:intergenic |
| TAACATACCCCTGCCTGGAT+TGG | 0.394502 | 7.4:-1514195 | None:intergenic |
| TTTCATCATGGGAGATAATA+GGG | 0.399931 | 7.4:-1514353 | None:intergenic |
| AAAGTAGTACTGTCGGCTTT+TGG | 0.405726 | 7.4:-1514390 | None:intergenic |
| AACATACCCCTGCCTGGATT+GGG | 0.431360 | 7.4:-1514194 | None:intergenic |
| TCCATATATTTGCCCAATCC+AGG | 0.439317 | 7.4:+1514182 | MS.gene22836:CDS |
| ATTCTTGTTGATTTCATCAT+GGG | 0.448511 | 7.4:-1514364 | None:intergenic |
| TATTCTTGTTGATTTCATCA+TGG | 0.453333 | 7.4:-1514365 | None:intergenic |
| GTGCCGTGACTCGTAGTATT+GGG | 0.460519 | 7.4:-1514126 | None:intergenic |
| ATATTTATCCCTCCTTCCAC+TGG | 0.465128 | 7.4:-1515967 | None:intergenic |
| AGAGAAGGCAAATGCTCGTC+AGG | 0.467028 | 7.4:+1514319 | MS.gene22836:CDS |
| TGTGCCGTGACTCGTAGTAT+TGG | 0.489174 | 7.4:-1514127 | None:intergenic |
| TATATTTGCCCAATCCAGGC+AGG | 0.490476 | 7.4:+1514186 | MS.gene22836:CDS |
| GGCAAATGCTCGTCAGGAAA+GGG | 0.498231 | 7.4:+1514325 | MS.gene22836:CDS |
| GTACATAACATACCCCTGCC+TGG | 0.528478 | 7.4:-1514200 | None:intergenic |
| AGGCAAATGCTCGTCAGGAA+AGG | 0.543690 | 7.4:+1514324 | MS.gene22836:CDS |
| TCCTCAAGCTAGTTATCGCA+TGG | 0.558375 | 7.4:+1515877 | MS.gene22836:CDS |
| TCAGCATGCTCCCACACATA+GGG | 0.562374 | 7.4:-1514092 | None:intergenic |
| ATCAGCATGCTCCCACACAT+AGG | 0.581470 | 7.4:-1514093 | None:intergenic |
| TACAGGTTAAGATTAAGAGA+AGG | 0.585633 | 7.4:+1514304 | MS.gene22836:intron |
| TGCGATAACTAGCTTGAGGA+TGG | 0.595177 | 7.4:-1515874 | None:intergenic |
| TGTGGACACCAGTGGAAGGA+GGG | 0.602718 | 7.4:+1515959 | MS.gene22836:CDS |
| ATATTTGCCCAATCCAGGCA+GGG | 0.610625 | 7.4:+1514187 | MS.gene22836:CDS |
| GGATGGCGACAATTTGGGCA+AGG | 0.613537 | 7.4:-1515857 | None:intergenic |
| GTGTGGACACCAGTGGAAGG+AGG | 0.617591 | 7.4:+1515958 | MS.gene22836:CDS |
| TATTTGCCCAATCCAGGCAG+GGG | 0.628783 | 7.4:+1514188 | MS.gene22836:CDS |
| TTACCCAATACTACGAGTCA+CGG | 0.630549 | 7.4:+1514123 | MS.gene22836:CDS |
| TCCATGCGATAACTAGCTTG+AGG | 0.632752 | 7.4:-1515878 | None:intergenic |
| AAAGTGTGGACACCAGTGGA+AGG | 0.634668 | 7.4:+1515955 | MS.gene22836:CDS |
| ATCAAAAGTGTGGACACCAG+TGG | 0.638482 | 7.4:+1515951 | MS.gene22836:CDS |
| GGCAAATATATGGACAAGTG+AGG | 0.649591 | 7.4:-1514173 | None:intergenic |
| ACGGCACATCTCATCGCACA+AGG | 0.653666 | 7.4:+1514142 | MS.gene22836:CDS |
| GAGTGCTTGAATCAAAAGTG+TGG | 0.674641 | 7.4:+1515941 | MS.gene22836:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAACATTTTTTATGGTT+TGG | + | chr7.4:1515294-1515313 | MS.gene22836:intron | 15.0% |
| !! | AAAGAAATAACAAAGAAACA+AGG | - | chr7.4:1515769-1515788 | None:intergenic | 20.0% |
| !! | AATTAACATTGTTTATGGTT+TGG | + | chr7.4:1515429-1515448 | MS.gene22836:intron | 20.0% |
| !! | AGAAAAGGAAGAAATAAAAA+TGG | - | chr7.4:1515802-1515821 | None:intergenic | 20.0% |
| !! | TTCTTAAAAGCTCATAAATA+TGG | - | chr7.4:1514896-1514915 | None:intergenic | 20.0% |
| !! | TTGTGAATTAACATTGTTTA+TGG | + | chr7.4:1515424-1515443 | MS.gene22836:intron | 20.0% |
| !!! | AATACTGTTTGTTTTTGTTA+AGG | + | chr7.4:1515722-1515741 | MS.gene22836:intron | 20.0% |
| !!! | ATACATGATAAAAGTATTAC+AGG | - | chr7.4:1514782-1514801 | None:intergenic | 20.0% |
| !!! | ATACTGTTTGTTTTTGTTAA+GGG | + | chr7.4:1515723-1515742 | MS.gene22836:intron | 20.0% |
| !!! | ATCATGTTTTTTTACTTTAC+AGG | + | chr7.4:1514287-1514306 | MS.gene22836:intron | 20.0% |
| !!! | ATTTATGATCTTTAAGAAGT+AGG | + | chr7.4:1515091-1515110 | MS.gene22836:intron | 20.0% |
| !!! | CTTTTCTTTTACATGATTTA+CGG | + | chr7.4:1515252-1515271 | MS.gene22836:intron | 20.0% |
| !!! | TGTCTTTTTTACATGATTTA+CGG | + | chr7.4:1515387-1515406 | MS.gene22836:intron | 20.0% |
| !!! | TTGCGAATTAACATTTTTTA+TGG | + | chr7.4:1515289-1515308 | MS.gene22836:intron | 20.0% |
| !!! | TTTATGATCTTTAAGAAGTA+GGG | + | chr7.4:1515092-1515111 | MS.gene22836:intron | 20.0% |
| ! | AACTAATTGGGTAATAGAAA+TGG | - | chr7.4:1514239-1514258 | None:intergenic | 25.0% |
| ! | AAGAAAGAAAGATGAATTGA+AGG | - | chr7.4:1514263-1514282 | None:intergenic | 25.0% |
| ! | AGAACAAAACAGTATTACAA+CGG | - | chr7.4:1515686-1515705 | None:intergenic | 25.0% |
| ! | ATAGCTTAAAAGTTCCTATT+AGG | - | chr7.4:1515015-1515034 | None:intergenic | 25.0% |
| ! | ATGAATTGAAGGTAACTAAT+TGG | - | chr7.4:1514252-1514271 | None:intergenic | 25.0% |
| ! | CATAAACCTTCCAAATATAT+TGG | - | chr7.4:1514733-1514752 | None:intergenic | 25.0% |
| ! | CATATCAAATTTCTGTGATT+TGG | + | chr7.4:1514841-1514860 | MS.gene22836:intron | 25.0% |
| ! | CTTTAGTCAATAAGATAAGA+GGG | - | chr7.4:1514615-1514634 | None:intergenic | 25.0% |
| ! | GAAAAAAAGAAAAGAGGAAT+GGG | - | chr7.4:1515827-1515846 | None:intergenic | 25.0% |
| ! | GATATAACTCCTAATAAGAA+TGG | + | chr7.4:1515053-1515072 | MS.gene22836:intron | 25.0% |
| ! | TAAAAGAAAAGTAGTACTGT+CGG | - | chr7.4:1514400-1514419 | None:intergenic | 25.0% |
| ! | TAAACTCAAAAGTTCCTATT+AGG | - | chr7.4:1515182-1515201 | None:intergenic | 25.0% |
| ! | TCTTTAGTCAATAAGATAAG+AGG | - | chr7.4:1514616-1514635 | None:intergenic | 25.0% |
| ! | TGAATTGAAGGTAACTAATT+GGG | - | chr7.4:1514251-1514270 | None:intergenic | 25.0% |
| ! | TTTAGTCAATAAGATAAGAG+GGG | - | chr7.4:1514614-1514633 | None:intergenic | 25.0% |
| ! | TTTGATTATCAACTCCTAAT+AGG | + | chr7.4:1514973-1514992 | MS.gene22836:intron | 25.0% |
| ! | TTTGATTATCAACTCCTAAT+TGG | + | chr7.4:1514973-1514992 | MS.gene22836:intron | 25.0% |
| !! | AACTGATTGTACTAGTTTAT+TGG | + | chr7.4:1514553-1514572 | MS.gene22836:intron | 25.0% |
| !! | GAAATTTGATATGTATTGAC+AGG | - | chr7.4:1514834-1514853 | None:intergenic | 25.0% |
| !!! | ATTCTTGTTGATTTCATCAT+GGG | - | chr7.4:1514367-1514386 | None:intergenic | 25.0% |
| !!! | GTGATTTGGTTTTAACTTTA+AGG | + | chr7.4:1514855-1514874 | MS.gene22836:intron | 25.0% |
| !!! | TATTCTTGTTGATTTCATCA+TGG | - | chr7.4:1514368-1514387 | None:intergenic | 25.0% |
| !!! | TTATGAGCTTTTAAGAAGTA+GGG | + | chr7.4:1514899-1514918 | MS.gene22836:intron | 25.0% |
| !!! | TTTATGAGCTTTTAAGAAGT+AGG | + | chr7.4:1514898-1514917 | MS.gene22836:intron | 25.0% |
| !!! | TTTGGTTTTAACTTTAAGGA+CGG | + | chr7.4:1514859-1514878 | MS.gene22836:intron | 25.0% |
| AAGTATTACAGGCTTAGATT+TGG | - | chr7.4:1514771-1514790 | None:intergenic | 30.0% | |
| AATTAACATTGTTCGTGGTT+TGG | + | chr7.4:1515564-1515583 | MS.gene22836:intron | 30.0% | |
| AGCAAGACAAACTTAATACA+AGG | - | chr7.4:1515209-1515228 | None:intergenic | 30.0% | |
| ATCTAATGCAAAGGGATAAA+TGG | + | chr7.4:1514657-1514676 | MS.gene22836:intron | 30.0% | |
| ATTTCATCATGGGAGATAAT+AGG | - | chr7.4:1514357-1514376 | None:intergenic | 30.0% | |
| GGAAAAAAAGAAAAGAGGAA+TGG | - | chr7.4:1515828-1515847 | None:intergenic | 30.0% | |
| TACAGGTTAAGATTAAGAGA+AGG | + | chr7.4:1514304-1514323 | MS.gene22836:intron | 30.0% | |
| TACATGATTTACAGTTTGAG+CGG | + | chr7.4:1515531-1515550 | MS.gene22836:intron | 30.0% | |
| TCTAATGCAAAGGGATAAAT+GGG | + | chr7.4:1514658-1514677 | MS.gene22836:intron | 30.0% | |
| TGAATGTGATCTAATGCAAA+GGG | + | chr7.4:1514649-1514668 | MS.gene22836:intron | 30.0% | |
| TTGAATGTGATCTAATGCAA+AGG | + | chr7.4:1514648-1514667 | MS.gene22836:intron | 30.0% | |
| TTGAGCATACCATTCTTATT+AGG | - | chr7.4:1515065-1515084 | None:intergenic | 30.0% | |
| TTGAGGTCATCCAATATATT+TGG | + | chr7.4:1514720-1514739 | MS.gene22836:intron | 30.0% | |
| TTGTGAATTAACATTGTTCG+TGG | + | chr7.4:1515559-1515578 | MS.gene22836:intron | 30.0% | |
| TTTCATCATGGGAGATAATA+GGG | - | chr7.4:1514356-1514375 | None:intergenic | 30.0% | |
| ! | CATGTAAAAGAAAAGCACAA+TGG | - | chr7.4:1515247-1515266 | None:intergenic | 30.0% |
| !! | TATGAGCTTTTAAGAAGTAG+GGG | + | chr7.4:1514900-1514919 | MS.gene22836:intron | 30.0% |
| !! | TTATGGTTTGGTTATTTGAG+CGG | + | chr7.4:1515306-1515325 | MS.gene22836:intron | 30.0% |
| AGGAGGGAAAAAAAGAAAAG+AGG | - | chr7.4:1515833-1515852 | None:intergenic | 35.0% | |
| CACTCGTAAAATATTGTTGC+AGG | - | chr7.4:1515926-1515945 | None:intergenic | 35.0% | |
| CTAATGCAAAGGGATAAATG+GGG | + | chr7.4:1514659-1514678 | MS.gene22836:intron | 35.0% | |
| GGTCATCCAATATATTTGGA+AGG | + | chr7.4:1514724-1514743 | MS.gene22836:intron | 35.0% | |
| TACATGATTTACGGTTTGAG+CGG | + | chr7.4:1515261-1515280 | MS.gene22836:intron | 35.0% | |
| TTGACTCAACAGTTCCAATT+AGG | - | chr7.4:1514990-1515009 | None:intergenic | 35.0% | |
| ! | TATTTTTCCTAGCACTGTTG+AGG | + | chr7.4:1514703-1514722 | MS.gene22836:intron | 35.0% |
| ! | TCATTGTGGACTTGTTTACT+TGG | + | chr7.4:1514467-1514486 | MS.gene22836:intron | 35.0% |
| ! | TGTACTAGTTTATTGGACGT+TGG | + | chr7.4:1514560-1514579 | MS.gene22836:intron | 35.0% |
| ! | TTCAATCACCGTTTTGTCTA+GGG | + | chr7.4:1515464-1515483 | MS.gene22836:intron | 35.0% |
| AAAGAGGAATGGGTGAGAAA+AGG | - | chr7.4:1515817-1515836 | None:intergenic | 40.0% | |
| AAGTAGGGAAGTAGAAGTCA+TGG | + | chr7.4:1515107-1515126 | MS.gene22836:intron | 40.0% | |
| AGTCCACAATGAGCTAAAGA+AGG | - | chr7.4:1514459-1514478 | None:intergenic | 40.0% | |
| CTGTTGAGTCAACTCCTAAT+AGG | + | chr7.4:1514998-1515017 | MS.gene22836:intron | 40.0% | |
| GAGTGCTTGAATCAAAAGTG+TGG | + | chr7.4:1515941-1515960 | MS.gene22836:CDS | 40.0% | |
| GGCAAATATATGGACAAGTG+AGG | - | chr7.4:1514176-1514195 | None:intergenic | 40.0% | |
| TCCATATATTTGCCCAATCC+AGG | + | chr7.4:1514182-1514201 | MS.gene22836:CDS | 40.0% | |
| TTACCCAATACTACGAGTCA+CGG | + | chr7.4:1514123-1514142 | MS.gene22836:CDS | 40.0% | |
| ! | CATCCTTCTTTAGCTCATTG+TGG | + | chr7.4:1514453-1514472 | MS.gene22836:intron | 40.0% |
| ! | GGGGCTTTAGTTTAGTGTAA+GGG | + | chr7.4:1514678-1514697 | MS.gene22836:intron | 40.0% |
| ! | GTTCAATCACCGTTTTGTCT+AGG | + | chr7.4:1515463-1515482 | MS.gene22836:intron | 40.0% |
| ! | TGGGGCTTTAGTTTAGTGTA+AGG | + | chr7.4:1514677-1514696 | MS.gene22836:intron | 40.0% |
| ! | TTCAACCACCGTTTTGTCTA+GGG | + | chr7.4:1515329-1515348 | MS.gene22836:intron | 40.0% |
| !! | TCGTGGTTTGGTTATTTGAG+CGG | + | chr7.4:1515576-1515595 | MS.gene22836:intron | 40.0% |
| !!! | AAAGTAGTACTGTCGGCTTT+TGG | - | chr7.4:1514393-1514412 | None:intergenic | 40.0% |
| ATATTTGCCCAATCCAGGCA+GGG | + | chr7.4:1514187-1514206 | MS.gene22836:CDS | 45.0% | |
| CTCAAACCAAGACAGAACAG+TGG | - | chr7.4:1515607-1515626 | None:intergenic | 45.0% | |
| CTTGAGGATGGCGACAATTT+GGG | - | chr7.4:1515865-1515884 | None:intergenic | 45.0% | |
| GTTCAACCACTGTTCTGTCT+TGG | + | chr7.4:1515598-1515617 | MS.gene22836:intron | 45.0% | |
| TATATTTGCCCAATCCAGGC+AGG | + | chr7.4:1514186-1514205 | MS.gene22836:CDS | 45.0% | |
| TATTACAACGGACATCGAGC+AGG | - | chr7.4:1515674-1515693 | None:intergenic | 45.0% | |
| TCCTCAAGCTAGTTATCGCA+TGG | + | chr7.4:1515877-1515896 | MS.gene22836:CDS | 45.0% | |
| ! | AATTTGGGCAAGGTACTAGG+AGG | - | chr7.4:1515850-1515869 | None:intergenic | 45.0% |
| ! | AGTAGGGGAAGTATAAGTCG+TGG | + | chr7.4:1514915-1514934 | MS.gene22836:intron | 45.0% |
| ! | ATCAAAAGTGTGGACACCAG+TGG | + | chr7.4:1515951-1515970 | MS.gene22836:CDS | 45.0% |
| ! | ATGGAGTTTTGCCCTATGTG+TGG | + | chr7.4:1514081-1514100 | MS.gene22836:CDS | 45.0% |
| ! | ATTTGGGCAAGGTACTAGGA+GGG | - | chr7.4:1515849-1515868 | None:intergenic | 45.0% |
| ! | CTGTTCTGTCTTGGTTTGAG+CGG | + | chr7.4:1515607-1515626 | MS.gene22836:intron | 45.0% |
| ! | GACAATTTGGGCAAGGTACT+AGG | - | chr7.4:1515853-1515872 | None:intergenic | 45.0% |
| ! | GCCTGGATTGGGCAAATATA+TGG | - | chr7.4:1514186-1514205 | None:intergenic | 45.0% |
| ! | GTTCAACCACCGTTTTGTCT+AGG | + | chr7.4:1515328-1515347 | MS.gene22836:intron | 45.0% |
| ! | TCCATGCGATAACTAGCTTG+AGG | - | chr7.4:1515881-1515900 | None:intergenic | 45.0% |
| ! | TGCGATAACTAGCTTGAGGA+TGG | - | chr7.4:1515877-1515896 | None:intergenic | 45.0% |
| ! | TGGAGTTTTGCCCTATGTGT+GGG | + | chr7.4:1514082-1514101 | MS.gene22836:CDS | 45.0% |
| AAAGTGTGGACACCAGTGGA+AGG | + | chr7.4:1515955-1515974 | MS.gene22836:CDS | 50.0% | |
| AACATACCCCTGCCTGGATT+GGG | - | chr7.4:1514197-1514216 | None:intergenic | 50.0% | |
| AGAGAAGGCAAATGCTCGTC+AGG | + | chr7.4:1514319-1514338 | MS.gene22836:CDS | 50.0% | |
| AGGCAAATGCTCGTCAGGAA+AGG | + | chr7.4:1514324-1514343 | MS.gene22836:CDS | 50.0% | |
| ATCAGCATGCTCCCACACAT+AGG | - | chr7.4:1514096-1514115 | None:intergenic | 50.0% | |
| CCGCTTGACCCTAGACAAAA+CGG | - | chr7.4:1515475-1515494 | None:intergenic | 50.0% | |
| GCTTGAGGATGGCGACAATT+TGG | - | chr7.4:1515866-1515885 | None:intergenic | 50.0% | |
| GGCAAATGCTCGTCAGGAAA+GGG | + | chr7.4:1514325-1514344 | MS.gene22836:CDS | 50.0% | |
| GGGAAGTAGAAGTCATGGTC+TGG | + | chr7.4:1515112-1515131 | MS.gene22836:intron | 50.0% | |
| GTACATAACATACCCCTGCC+TGG | - | chr7.4:1514203-1514222 | None:intergenic | 50.0% | |
| GTGCCGTGACTCGTAGTATT+GGG | - | chr7.4:1514129-1514148 | None:intergenic | 50.0% | |
| TAACATACCCCTGCCTGGAT+TGG | - | chr7.4:1514198-1514217 | None:intergenic | 50.0% | |
| TATTTGCCCAATCCAGGCAG+GGG | + | chr7.4:1514188-1514207 | MS.gene22836:CDS | 50.0% | |
| TCAGCATGCTCCCACACATA+GGG | - | chr7.4:1514095-1514114 | None:intergenic | 50.0% | |
| TGGATGACCTCAACAGTGCT+AGG | - | chr7.4:1514713-1514732 | None:intergenic | 50.0% | |
| TGTGCCGTGACTCGTAGTAT+TGG | - | chr7.4:1514130-1514149 | None:intergenic | 50.0% | |
| ! | GGGAAGTATAAGTCGTGGTG+TGG | + | chr7.4:1514920-1514939 | MS.gene22836:intron | 50.0% |
| !! | CCGTTTTGTCTAGGGTCAAG+CGG | + | chr7.4:1515472-1515491 | MS.gene22836:intron | 50.0% |
| ACGGCACATCTCATCGCACA+AGG | + | chr7.4:1514142-1514161 | MS.gene22836:CDS | 55.0% | |
| CCGCTCGACCCTAGACAAAA+CGG | - | chr7.4:1515340-1515359 | None:intergenic | 55.0% | |
| CTCGACCCTAGACAAAACGG+TGG | - | chr7.4:1515337-1515356 | None:intergenic | 55.0% | |
| GGATGGCGACAATTTGGGCA+AGG | - | chr7.4:1515860-1515879 | None:intergenic | 55.0% | |
| TGTGGACACCAGTGGAAGGA+GGG | + | chr7.4:1515959-1515978 | MS.gene22836:CDS | 55.0% | |
| !! | CCGTTTTGTCTAGGGTCGAG+CGG | + | chr7.4:1515337-1515356 | MS.gene22836:intron | 55.0% |
| GTGTGGACACCAGTGGAAGG+AGG | + | chr7.4:1515958-1515977 | MS.gene22836:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 1514081 | 1515985 | 1514081 | ID=MS.gene22836 |
| chr7.4 | mRNA | 1514081 | 1515985 | 1514081 | ID=MS.gene22836.t1;Parent=MS.gene22836 |
| chr7.4 | exon | 1514081 | 1514209 | 1514081 | ID=MS.gene22836.t1.exon1;Parent=MS.gene22836.t1 |
| chr7.4 | CDS | 1514081 | 1514209 | 1514081 | ID=cds.MS.gene22836.t1;Parent=MS.gene22836.t1 |
| chr7.4 | exon | 1514309 | 1514402 | 1514309 | ID=MS.gene22836.t1.exon2;Parent=MS.gene22836.t1 |
| chr7.4 | CDS | 1514309 | 1514402 | 1514309 | ID=cds.MS.gene22836.t1;Parent=MS.gene22836.t1 |
| chr7.4 | exon | 1515855 | 1515985 | 1515855 | ID=MS.gene22836.t1.exon3;Parent=MS.gene22836.t1 |
| chr7.4 | CDS | 1515855 | 1515985 | 1515855 | ID=cds.MS.gene22836.t1;Parent=MS.gene22836.t1 |
| Gene Sequence |
| Protein sequence |
