Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026445.t1 | XP_013466662.1 | 97.5 | 315 | 8 | 0 | 1 | 315 | 1 | 315 | 2.40E-169 | 604.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026445.t1 | Q9C9X3 | 55.6 | 313 | 138 | 1 | 1 | 312 | 1 | 313 | 4.8e-94 | 345.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026445.t1 | A0A072VGY1 | 97.5 | 315 | 8 | 0 | 1 | 315 | 1 | 315 | 1.7e-169 | 604.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056195 | MS.gene026445 | PPI |
| MS.gene57291 | MS.gene026445 | PPI |
| MS.gene026445 | MS.gene67887 | PPI |
| MS.gene026445 | MS.gene55897 | PPI |
| MS.gene45772 | MS.gene026445 | PPI |
| MS.gene026445 | MS.gene89484 | PPI |
| MS.gene026445 | MS.gene058336 | PPI |
| MS.gene026445 | MS.gene010215 | PPI |
| MS.gene026445 | MS.gene92405 | PPI |
| MS.gene026445 | MS.gene035891 | PPI |
| MS.gene016642 | MS.gene026445 | PPI |
| MS.gene28077 | MS.gene026445 | PPI |
| MS.gene026445 | MS.gene030809 | PPI |
| MS.gene026445 | MS.gene043964 | PPI |
| MS.gene026445 | MS.gene00058 | PPI |
| MS.gene026445 | MS.gene061777 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026445.t1 | MTR_1g033560 | 97.460 | 315 | 8 | 0 | 1 | 315 | 1 | 315 | 0.0 | 632 |
| MS.gene026445.t1 | MTR_8g107640 | 59.873 | 314 | 122 | 3 | 1 | 312 | 1 | 312 | 1.52e-139 | 397 |
| MS.gene026445.t1 | MTR_6g071605 | 60.000 | 315 | 120 | 3 | 1 | 312 | 1 | 312 | 6.27e-133 | 380 |
| MS.gene026445.t1 | MTR_6g071615 | 58.991 | 317 | 124 | 3 | 1 | 314 | 1 | 314 | 5.47e-128 | 368 |
| MS.gene026445.t1 | MTR_1g112520 | 57.862 | 318 | 128 | 3 | 1 | 315 | 1 | 315 | 2.10e-126 | 364 |
| MS.gene026445.t1 | MTR_6g071595 | 60.377 | 318 | 120 | 3 | 1 | 315 | 1 | 315 | 7.66e-125 | 360 |
| MS.gene026445.t1 | MTR_6g071595 | 58.893 | 253 | 98 | 3 | 1 | 250 | 1 | 250 | 2.56e-97 | 288 |
| MS.gene026445.t1 | MTR_3g018790 | 36.508 | 315 | 197 | 3 | 1 | 314 | 1 | 313 | 9.84e-68 | 214 |
| MS.gene026445.t1 | MTR_5g063670 | 36.422 | 313 | 197 | 2 | 1 | 312 | 1 | 312 | 3.46e-67 | 213 |
| MS.gene026445.t1 | MTR_8g038180 | 37.380 | 313 | 193 | 3 | 1 | 312 | 1 | 311 | 1.00e-66 | 212 |
| MS.gene026445.t1 | MTR_8g038210 | 38.413 | 315 | 190 | 4 | 1 | 314 | 1 | 312 | 1.47e-66 | 211 |
| MS.gene026445.t1 | MTR_3g018780 | 37.061 | 313 | 194 | 3 | 1 | 312 | 1 | 311 | 3.18e-66 | 210 |
| MS.gene026445.t1 | MTR_0276s0050 | 36.709 | 316 | 196 | 3 | 1 | 314 | 1 | 314 | 1.36e-65 | 209 |
| MS.gene026445.t1 | MTR_8g038220 | 37.061 | 313 | 194 | 3 | 1 | 312 | 1 | 311 | 2.22e-65 | 208 |
| MS.gene026445.t1 | MTR_8g038210 | 37.778 | 315 | 192 | 4 | 1 | 314 | 1 | 312 | 6.33e-65 | 207 |
| MS.gene026445.t1 | MTR_8g038150 | 35.127 | 316 | 200 | 3 | 1 | 312 | 1 | 315 | 9.07e-65 | 207 |
| MS.gene026445.t1 | MTR_8g038220 | 37.061 | 313 | 193 | 3 | 1 | 312 | 1 | 310 | 2.12e-64 | 206 |
| MS.gene026445.t1 | MTR_2g031980 | 34.211 | 304 | 198 | 2 | 12 | 314 | 11 | 313 | 1.32e-60 | 196 |
| MS.gene026445.t1 | MTR_3g018790 | 33.471 | 242 | 159 | 2 | 74 | 314 | 19 | 259 | 1.43e-44 | 153 |
| MS.gene026445.t1 | MTR_8g038170 | 29.316 | 307 | 194 | 6 | 22 | 312 | 12 | 311 | 2.77e-36 | 132 |
| MS.gene026445.t1 | MTR_8g038170 | 29.316 | 307 | 194 | 6 | 22 | 312 | 12 | 311 | 2.77e-36 | 132 |
| MS.gene026445.t1 | MTR_6g028030 | 29.373 | 303 | 202 | 7 | 16 | 310 | 9 | 307 | 1.85e-30 | 117 |
| MS.gene026445.t1 | MTR_3g018920 | 30.882 | 204 | 108 | 2 | 6 | 209 | 5 | 175 | 1.01e-25 | 101 |
| MS.gene026445.t1 | MTR_3g018925 | 37.755 | 98 | 61 | 0 | 217 | 314 | 11 | 108 | 1.36e-17 | 77.4 |
| MS.gene026445.t1 | MTR_8g038090 | 42.857 | 70 | 39 | 1 | 244 | 312 | 21 | 90 | 7.95e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026445.t1 | AT1G68090 | 55.591 | 313 | 138 | 1 | 1 | 312 | 1 | 313 | 4.07e-126 | 363 |
| MS.gene026445.t1 | AT1G68090 | 29.861 | 144 | 96 | 3 | 171 | 313 | 16 | 155 | 3.44e-11 | 63.5 |
| MS.gene026445.t1 | AT1G68090 | 53.600 | 250 | 115 | 1 | 1 | 249 | 1 | 250 | 6.39e-96 | 284 |
| MS.gene026445.t1 | AT1G68090 | 27.004 | 237 | 151 | 6 | 85 | 311 | 13 | 237 | 1.28e-15 | 75.5 |
| MS.gene026445.t1 | AT1G68090 | 29.861 | 144 | 96 | 3 | 171 | 313 | 16 | 155 | 1.37e-11 | 63.9 |
| MS.gene026445.t1 | AT5G65020 | 41.587 | 315 | 179 | 4 | 1 | 312 | 1 | 313 | 5.70e-82 | 251 |
| MS.gene026445.t1 | AT5G10230 | 38.291 | 316 | 193 | 2 | 1 | 315 | 1 | 315 | 2.56e-79 | 244 |
| MS.gene026445.t1 | AT5G10220 | 38.871 | 319 | 189 | 5 | 1 | 315 | 1 | 317 | 2.08e-73 | 229 |
| MS.gene026445.t1 | AT5G12380 | 38.019 | 313 | 191 | 3 | 1 | 312 | 1 | 311 | 2.72e-73 | 229 |
| MS.gene026445.t1 | AT1G35720 | 36.709 | 316 | 197 | 3 | 1 | 314 | 1 | 315 | 2.14e-72 | 226 |
| MS.gene026445.t1 | AT5G65020 | 40.345 | 290 | 168 | 4 | 26 | 312 | 11 | 298 | 3.70e-70 | 220 |
| MS.gene026445.t1 | AT2G38760 | 32.812 | 320 | 207 | 5 | 1 | 313 | 1 | 319 | 2.93e-55 | 182 |
| MS.gene026445.t1 | AT2G38750 | 29.904 | 311 | 179 | 9 | 26 | 311 | 2 | 298 | 2.56e-30 | 117 |
| MS.gene026445.t1 | AT2G38750 | 29.904 | 311 | 179 | 9 | 26 | 311 | 19 | 315 | 3.99e-30 | 116 |
Find 62 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATTAGACTATCCAATTC+TGG | 0.202757 | 1.1:+18527792 | None:intergenic |
| GATTTAACAGCATGAGTTAA+TGG | 0.225591 | 1.1:+18525915 | None:intergenic |
| TTTCATACTCTTGTTGAATA+AGG | 0.265779 | 1.1:+18529520 | None:intergenic |
| GTCTTGGGTGTGACACAAAA+AGG | 0.276879 | 1.1:-18529584 | MS.gene026445:CDS |
| GCCAAACTATTGTATAAATC+AGG | 0.302808 | 1.1:-18527759 | MS.gene026445:CDS |
| CCCTGATTTATACAATAGTT+TGG | 0.305552 | 1.1:+18527758 | None:intergenic |
| AACTCTGCATACACTTCATT+TGG | 0.335072 | 1.1:-18527657 | MS.gene026445:CDS |
| GCAGCGTATTATAGTAGATA+TGG | 0.350950 | 1.1:-18525942 | MS.gene026445:CDS |
| CTGATGATAGTAGACTAATA+AGG | 0.352131 | 1.1:-18526007 | MS.gene026445:CDS |
| CGCAAGTCAATGAAGGGTAT+TGG | 0.362509 | 1.1:-18526032 | MS.gene026445:CDS |
| TCTTGTGATCACCACTAGTT+TGG | 0.363564 | 1.1:+18528682 | None:intergenic |
| TTCAGAAAGCATTGTTACTT+TGG | 0.377422 | 1.1:-18528881 | MS.gene026445:intron |
| CTGATGAGAAAACATTTATA+AGG | 0.380650 | 1.1:-18527719 | MS.gene026445:CDS |
| AGACTTTCTTATAAGTCTCT+TGG | 0.389577 | 1.1:-18525871 | MS.gene026445:CDS |
| TCACGAGGTGATGGTATAAC+TGG | 0.394074 | 1.1:+18530198 | None:intergenic |
| TATTTATTGTTATAGGTCTT+GGG | 0.399548 | 1.1:-18529599 | MS.gene026445:intron |
| ACGGTATGAAGGCCCAGAAT+TGG | 0.403087 | 1.1:-18527805 | MS.gene026445:CDS |
| TTCAATCTCCTTAATTGTGA+TGG | 0.407105 | 1.1:+18528756 | None:intergenic |
| TGAAAGAAGCAGCACACATT+TGG | 0.408779 | 1.1:-18527688 | MS.gene026445:CDS |
| ATAGCTTGATTATCAACAAC+TGG | 0.421175 | 1.1:+18528804 | None:intergenic |
| GACTTTCTTATAAGTCTCTT+GGG | 0.422412 | 1.1:-18525870 | MS.gene026445:CDS |
| AATTACCTTGGCAAAGTACA+TGG | 0.439729 | 1.1:+18527026 | None:intergenic |
| AATCTCTGCAGATATTCGTT+TGG | 0.442007 | 1.1:+18529476 | None:intergenic |
| CCATTAGACTATCCAATTCT+GGG | 0.447171 | 1.1:+18527793 | None:intergenic |
| CTCGTACACCATCACAATTA+AGG | 0.458956 | 1.1:-18528764 | MS.gene026445:CDS |
| GCTACCTTAGCATCCCTACT+TGG | 0.465128 | 1.1:+18528846 | None:intergenic |
| ATTTGGCAAATCATTAGAAA+AGG | 0.470245 | 1.1:-18527640 | MS.gene026445:intron |
| CCCAGAATTGGATAGTCTAA+TGG | 0.474406 | 1.1:-18527793 | MS.gene026445:CDS |
| GTTAGTAGCACATCGTAGTA+TGG | 0.477722 | 1.1:+18527053 | None:intergenic |
| TATAACTGGAGGTACGGTTA+AGG | 0.480148 | 1.1:+18530212 | None:intergenic |
| TGATGATAGTAGACTAATAA+GGG | 0.480167 | 1.1:-18526006 | MS.gene026445:CDS |
| AAATCAGGGGAGAAGAGAAT+AGG | 0.498158 | 1.1:-18527744 | MS.gene026445:CDS |
| GCAGATATTCGTTTGGAAAG+TGG | 0.508207 | 1.1:+18529483 | None:intergenic |
| CGAATATCTGCAGAGATTCG+TGG | 0.512778 | 1.1:-18529471 | MS.gene026445:CDS |
| GCTGTTAAATCAGATACATC+AGG | 0.517770 | 1.1:-18525903 | MS.gene026445:CDS |
| TTAGCATCTTCACGAGGTGA+TGG | 0.528260 | 1.1:+18530189 | None:intergenic |
| CCAAACTATTGTATAAATCA+GGG | 0.532319 | 1.1:-18527758 | MS.gene026445:CDS |
| AAGCTGCACAAAGCTTTCAA+AGG | 0.533060 | 1.1:-18530165 | MS.gene026445:intron |
| GCGATAAAGAGTGAAACATC+TGG | 0.534844 | 1.1:-18527099 | MS.gene026445:CDS |
| TCCTCCAAGTAGGGATGCTA+AGG | 0.535677 | 1.1:-18528850 | MS.gene026445:CDS |
| GTAAGTACACCACGGTATGA+AGG | 0.540856 | 1.1:-18527816 | MS.gene026445:CDS |
| TTATTCAAATCCTTGCTCAC+AGG | 0.541564 | 1.1:-18529560 | MS.gene026445:CDS |
| ACCTTAGCATCCCTACTTGG+AGG | 0.546913 | 1.1:+18528849 | None:intergenic |
| GTTCTGAATTCCTGTGAGCA+AGG | 0.563075 | 1.1:+18529550 | None:intergenic |
| TTTCAATGTCATGCTCAAGA+GGG | 0.576299 | 1.1:+18528706 | None:intergenic |
| GCTGCATGATCCTCCAAGTA+GGG | 0.580144 | 1.1:-18528859 | MS.gene026445:CDS |
| CTCTCCCATGTACTTTGCCA+AGG | 0.580874 | 1.1:-18527031 | MS.gene026445:intron |
| GGCTGCATGATCCTCCAAGT+AGG | 0.599790 | 1.1:-18528860 | MS.gene026445:CDS |
| TTCAATGTCATGCTCAAGAG+GGG | 0.603456 | 1.1:+18528707 | None:intergenic |
| TGATGGTATAACTGGAGGTA+CGG | 0.606172 | 1.1:+18530206 | None:intergenic |
| GACATTGAAAACCAAACTAG+TGG | 0.613215 | 1.1:-18528693 | MS.gene026445:CDS |
| AGAGATTCGTGGTCATCTCA+AGG | 0.613850 | 1.1:-18529460 | MS.gene026445:intron |
| AATTCTGGGCCTTCATACCG+TGG | 0.617803 | 1.1:+18527807 | None:intergenic |
| GTAGGGATGCTAAGGTAGCA+AGG | 0.621703 | 1.1:-18528842 | MS.gene026445:CDS |
| GAGGGGAATGATAATTTGAG+AGG | 0.626707 | 1.1:+18528724 | None:intergenic |
| ATTACCTTGGCAAAGTACAT+GGG | 0.642201 | 1.1:+18527027 | None:intergenic |
| AACTAGTGGTGATCACAAGA+AGG | 0.647816 | 1.1:-18528679 | MS.gene026445:intron |
| CAAACTATTGTATAAATCAG+GGG | 0.654206 | 1.1:-18527757 | MS.gene026445:CDS |
| CGAGGTGATGGTATAACTGG+AGG | 0.665337 | 1.1:+18530201 | None:intergenic |
| AGCTTCTTAGCATCTTCACG+AGG | 0.687999 | 1.1:+18530183 | None:intergenic |
| TAATAAGGGTAATAGTGACA+AGG | 0.703755 | 1.1:-18525992 | MS.gene026445:CDS |
| TTGCATATGTAAGTACACCA+CGG | 0.759910 | 1.1:-18527824 | MS.gene026445:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTATTTTATTTTTTT+TGG | - | chr1.1:18527450-18527469 | MS.gene026445:intron | 0.0% |
| !! | AAAAAAAAAACATTATTGTT+TGG | - | chr1.1:18529974-18529993 | MS.gene026445:intron | 10.0% |
| !! | AAAAAAAAACATTATTGTTT+GGG | - | chr1.1:18529975-18529994 | MS.gene026445:intron | 10.0% |
| !! | CAACTTAAAAAATATATAAA+TGG | + | chr1.1:18529591-18529610 | None:intergenic | 10.0% |
| !! | TTTAATTCAAAATTAGTAAA+TGG | + | chr1.1:18527008-18527027 | None:intergenic | 10.0% |
| !!! | TATTTTTTATATTTTAAACC+GGG | + | chr1.1:18529955-18529974 | None:intergenic | 10.0% |
| !!! | TTTTAGATATTTTCTTATTA+AGG | - | chr1.1:18526660-18526679 | MS.gene026445:intron | 10.0% |
| !! | AAAAATAAAACTATTGAGAT+AGG | + | chr1.1:18527437-18527456 | None:intergenic | 15.0% |
| !! | AAAATAAAACTATTGAGATA+GGG | + | chr1.1:18527436-18527455 | None:intergenic | 15.0% |
| !! | AATAAAATGTGATTTATGTT+TGG | - | chr1.1:18527911-18527930 | MS.gene026445:intron | 15.0% |
| !! | ACATTCAAAATAATCTATAT+CGG | - | chr1.1:18528613-18528632 | MS.gene026445:intron | 15.0% |
| !! | ATATTAATAAACTTTGACAT+TGG | - | chr1.1:18529128-18529147 | MS.gene026445:intron | 15.0% |
| !! | TTAAAAAATAAAAGGCTAAA+GGG | + | chr1.1:18529517-18529536 | None:intergenic | 15.0% |
| !!! | AAAATTTTGTATACTAATCA+TGG | - | chr1.1:18528205-18528224 | MS.gene026445:intron | 15.0% |
| !!! | AAACAATAATGTTTTGAAAT+GGG | + | chr1.1:18529725-18529744 | None:intergenic | 15.0% |
| !!! | AAACTTTTCTAATTATTTCT+AGG | + | chr1.1:18526820-18526839 | None:intergenic | 15.0% |
| !!! | AAATAACTAGACTTAATTTT+TGG | + | chr1.1:18526438-18526457 | None:intergenic | 15.0% |
| !!! | AACTTTTCTAATTATTTCTA+GGG | + | chr1.1:18526819-18526838 | None:intergenic | 15.0% |
| !!! | GAATGTTATTTTACAATTTT+GGG | + | chr1.1:18528599-18528618 | None:intergenic | 15.0% |
| !!! | TGAATGTTATTTTACAATTT+TGG | + | chr1.1:18528600-18528619 | None:intergenic | 15.0% |
| !!! | TGTTTATTCTATAACTTTTA+TGG | - | chr1.1:18529776-18529795 | MS.gene026445:intron | 15.0% |
| !!! | TTTATATTTTGCATTGAATT+TGG | - | chr1.1:18526279-18526298 | MS.gene026445:intron | 15.0% |
| !! | AAATAAAACTATTGAGATAG+GGG | + | chr1.1:18527435-18527454 | None:intergenic | 20.0% |
| !! | AACCAAATACATAGTATATT+TGG | + | chr1.1:18527873-18527892 | None:intergenic | 20.0% |
| !! | AACCAAATATACTATGTATT+TGG | - | chr1.1:18527868-18527887 | MS.gene026445:intron | 20.0% |
| !! | AATGCAAACAATAATGTAAA+TGG | + | chr1.1:18529810-18529829 | None:intergenic | 20.0% |
| !! | AATTCAAGGTTAAAAATCAA+CGG | - | chr1.1:18528034-18528053 | MS.gene026445:intron | 20.0% |
| !! | ACTTCTATCATTAAAGTTTA+TGG | + | chr1.1:18528793-18528812 | None:intergenic | 20.0% |
| !! | ATCACTTAATGAAAATTATG+AGG | - | chr1.1:18526362-18526381 | MS.gene026445:intron | 20.0% |
| !! | ATCTTACCATTAAAATTCAT+TGG | - | chr1.1:18529562-18529581 | MS.gene026445:CDS | 20.0% |
| !! | ATGCTGAGTTAAAAAATAAA+AGG | + | chr1.1:18529525-18529544 | None:intergenic | 20.0% |
| !! | CGATATGAATTAAATTTCAT+AGG | + | chr1.1:18528737-18528756 | None:intergenic | 20.0% |
| !! | GTTAAAAAATAAAAGGCTAA+AGG | + | chr1.1:18529518-18529537 | None:intergenic | 20.0% |
| !! | TAAGTTCAAATCAATTATTG+AGG | - | chr1.1:18528085-18528104 | MS.gene026445:intron | 20.0% |
| !! | TATTTATTGTTATAGGTCTT+GGG | - | chr1.1:18526477-18526496 | MS.gene026445:intron | 20.0% |
| !! | TCTTACCATTAAAATTCATT+GGG | - | chr1.1:18529563-18529582 | MS.gene026445:CDS | 20.0% |
| !! | TTAAAATACTCATGCATATT+TGG | - | chr1.1:18525957-18525976 | MS.gene026445:CDS | 20.0% |
| !! | TTAATGAAAATTATGAGGAA+AGG | - | chr1.1:18526367-18526386 | MS.gene026445:intron | 20.0% |
| !! | TTACCAATTCACAAAAATTA+AGG | - | chr1.1:18528861-18528880 | MS.gene026445:CDS | 20.0% |
| !! | TTATTTATTGTTATAGGTCT+TGG | - | chr1.1:18526476-18526495 | MS.gene026445:intron | 20.0% |
| !!! | AAATTTGTTAATTGTGTGTT+TGG | + | chr1.1:18527654-18527673 | None:intergenic | 20.0% |
| !!! | AATTAGTTATAGTTGACTTT+AGG | + | chr1.1:18527791-18527810 | None:intergenic | 20.0% |
| !!! | ATAAGATTGAGAATTTTCAA+CGG | + | chr1.1:18526770-18526789 | None:intergenic | 20.0% |
| !!! | ATTTTGCAAAAGCTATAATT+TGG | + | chr1.1:18526196-18526215 | None:intergenic | 20.0% |
| !!! | CAAACAATAATGTTTTGAAA+TGG | + | chr1.1:18529726-18529745 | None:intergenic | 20.0% |
| !!! | CAACATTTTTAAAAGATAAG+GGG | - | chr1.1:18529359-18529378 | MS.gene026445:intron | 20.0% |
| !!! | CTTTAGGTCTTTTTTTTTTA+AGG | + | chr1.1:18527775-18527794 | None:intergenic | 20.0% |
| !!! | CTTTATTATTTAGAGTGAAT+AGG | - | chr1.1:18528503-18528522 | MS.gene026445:intron | 20.0% |
| !!! | GCAACATTTTTAAAAGATAA+GGG | - | chr1.1:18529358-18529377 | MS.gene026445:intron | 20.0% |
| !!! | TAGGTCTTAAAAATTGATTT+TGG | + | chr1.1:18527743-18527762 | None:intergenic | 20.0% |
| !!! | TATAGTTTTTGCTAAATTCA+TGG | + | chr1.1:18526323-18526342 | None:intergenic | 20.0% |
| !!! | TCTCAATCTTATTAATCTTT+TGG | - | chr1.1:18526778-18526797 | MS.gene026445:intron | 20.0% |
| !!! | TTTTAAAAATGTTGCGATTT+TGG | + | chr1.1:18529353-18529372 | None:intergenic | 20.0% |
| !!! | TTTTTTAAGGAGTTGAATTT+AGG | + | chr1.1:18527762-18527781 | None:intergenic | 20.0% |
| !!! | TTTTTTAAGGCTAGATATAA+AGG | + | chr1.1:18528178-18528197 | None:intergenic | 20.0% |
| ! | AAACATATTTCCCTTATGTT+AGG | - | chr1.1:18529387-18529406 | MS.gene026445:intron | 25.0% |
| ! | AACATATTTCCCTTATGTTA+GGG | - | chr1.1:18529388-18529407 | MS.gene026445:intron | 25.0% |
| ! | AGTCAACTATAACTAATTTG+TGG | - | chr1.1:18527793-18527812 | MS.gene026445:CDS | 25.0% |
| ! | ATTTGGCAAATCATTAGAAA+AGG | - | chr1.1:18528436-18528455 | MS.gene026445:intron | 25.0% |
| ! | CAAACTATTGTATAAATCAG+GGG | - | chr1.1:18528319-18528338 | MS.gene026445:intron | 25.0% |
| ! | CCAAACTATTGTATAAATCA+GGG | - | chr1.1:18528318-18528337 | MS.gene026445:intron | 25.0% |
| ! | CTGATGAGAAAACATTTATA+AGG | - | chr1.1:18528357-18528376 | MS.gene026445:intron | 25.0% |
| ! | GAATATTTCGAAAAGATAAG+GGG | - | chr1.1:18529327-18529346 | MS.gene026445:intron | 25.0% |
| ! | GCATAAGAAACTAAATAGAA+CGG | + | chr1.1:18529104-18529123 | None:intergenic | 25.0% |
| ! | GGAATATTTCGAAAAGATAA+GGG | - | chr1.1:18529326-18529345 | MS.gene026445:intron | 25.0% |
| ! | TGATGATAGTAGACTAATAA+GGG | - | chr1.1:18530070-18530089 | MS.gene026445:intron | 25.0% |
| ! | TTGCATTCTTGAACAATATA+GGG | - | chr1.1:18529631-18529650 | MS.gene026445:intron | 25.0% |
| ! | TTGCATTCTTGAACAATTTA+GGG | - | chr1.1:18529743-18529762 | MS.gene026445:intron | 25.0% |
| ! | TTTCATACTCTTGTTGAATA+AGG | + | chr1.1:18526559-18526578 | None:intergenic | 25.0% |
| ! | TTTGCATTCTTGAACAATAT+AGG | - | chr1.1:18529630-18529649 | MS.gene026445:intron | 25.0% |
| ! | TTTGCATTCTTGAACAATTT+AGG | - | chr1.1:18529742-18529761 | MS.gene026445:intron | 25.0% |
| !! | AAAATTGTGGTTTTCATACA+TGG | - | chr1.1:18529447-18529466 | MS.gene026445:intron | 25.0% |
| !! | AAAATTGTGGTTTTCATACA+TGG | + | chr1.1:18529466-18529447 | None:intergenic | 25.0% |
| !! | AAATTGTGGTTTTCATACAT+GGG | - | chr1.1:18529448-18529467 | MS.gene026445:intron | 25.0% |
| !! | AAATTGTGGTTTTCATACAT+GGG | + | chr1.1:18529467-18529448 | None:intergenic | 25.0% |
| !! | AGTCCTTAATTTTTGTGAAT+TGG | + | chr1.1:18528867-18528886 | None:intergenic | 25.0% |
| !! | ATGTATGAAAACCACAATTT+TGG | - | chr1.1:18529254-18529273 | MS.gene026445:intron | 25.0% |
| !! | ATGTATGAAAACCACAATTT+TGG | + | chr1.1:18529273-18529254 | None:intergenic | 25.0% |
| !! | GAATAAAGATTTTCAGTTTC+AGG | - | chr1.1:18526845-18526864 | MS.gene026445:intron | 25.0% |
| !! | GTTCAGTTTTCTGTTATATA+TGG | + | chr1.1:18526948-18526967 | None:intergenic | 25.0% |
| !! | TTCAACGATTTTCAAACAAT+AGG | + | chr1.1:18527058-18527077 | None:intergenic | 25.0% |
| !!! | AGTATCTCAATTTTTCGAAT+TGG | - | chr1.1:18528563-18528582 | MS.gene026445:intron | 25.0% |
| !!! | ATTTTTTAACTCAGCATGAA+GGG | - | chr1.1:18529528-18529547 | MS.gene026445:CDS | 25.0% |
| !!! | CGCAACATTTTTAAAAGATA+AGG | - | chr1.1:18529357-18529376 | MS.gene026445:intron | 25.0% |
| !!! | CTGCAATTTTAAAGACTAAA+TGG | + | chr1.1:18526731-18526750 | None:intergenic | 25.0% |
| !!! | TATTTTTTAACTCAGCATGA+AGG | - | chr1.1:18529527-18529546 | MS.gene026445:CDS | 25.0% |
| !!! | TTCGAAATATTCCCTTTTTT+TGG | + | chr1.1:18529319-18529338 | None:intergenic | 25.0% |
| !!! | TTTCTTGTTGTACACTTTTT+GGG | - | chr1.1:18529156-18529175 | MS.gene026445:intron | 25.0% |
| !!! | TTTTCTTGTTGTACACTTTT+TGG | - | chr1.1:18529155-18529174 | MS.gene026445:intron | 25.0% |
| AAAACTGAACTCTATCCTAT+CGG | - | chr1.1:18526958-18526977 | MS.gene026445:intron | 30.0% | |
| AACGGTATATCAATGCAAAT+GGG | + | chr1.1:18529086-18529105 | None:intergenic | 30.0% | |
| AAGCACTACAAAATCATGTT+TGG | + | chr1.1:18527840-18527859 | None:intergenic | 30.0% | |
| ACATATTTCCCTTATGTTAG+GGG | - | chr1.1:18529389-18529408 | MS.gene026445:intron | 30.0% | |
| AGACTTTCTTATAAGTCTCT+TGG | - | chr1.1:18530205-18530224 | MS.gene026445:CDS | 30.0% | |
| AGCACTACAAAATCATGTTT+GGG | + | chr1.1:18527839-18527858 | None:intergenic | 30.0% | |
| AGCATATTTCCCTAAACATA+GGG | - | chr1.1:18529420-18529439 | MS.gene026445:intron | 30.0% | |
| ATAGCTTGATTATCAACAAC+TGG | + | chr1.1:18527275-18527294 | None:intergenic | 30.0% | |
| CCCTGATTTATACAATAGTT+TGG | + | chr1.1:18528321-18528340 | None:intergenic | 30.0% | |
| CTATATGATGTCTTCATGTT+TGG | - | chr1.1:18527171-18527190 | MS.gene026445:intron | 30.0% | |
| CTGATGATAGTAGACTAATA+AGG | - | chr1.1:18530069-18530088 | MS.gene026445:intron | 30.0% | |
| CTTCATGACAAAATATGAGT+TGG | + | chr1.1:18528957-18528976 | None:intergenic | 30.0% | |
| CTTGAACAATATAGGGTTTA+GGG | - | chr1.1:18529638-18529657 | MS.gene026445:intron | 30.0% | |
| GACTTTCTTATAAGTCTCTT+GGG | - | chr1.1:18530206-18530225 | MS.gene026445:CDS | 30.0% | |
| GATTTAACAGCATGAGTTAA+TGG | + | chr1.1:18530164-18530183 | None:intergenic | 30.0% | |
| GCCAAACTATTGTATAAATC+AGG | - | chr1.1:18528317-18528336 | MS.gene026445:intron | 30.0% | |
| GGCTTGTGAAATCATATAAA+AGG | - | chr1.1:18527471-18527490 | MS.gene026445:intron | 30.0% | |
| GGGAATATTTCGAAAAGATA+AGG | - | chr1.1:18529325-18529344 | MS.gene026445:intron | 30.0% | |
| GTTTGAATATACGATGAGTT+TGG | + | chr1.1:18526244-18526263 | None:intergenic | 30.0% | |
| TAATAAGGGTAATAGTGACA+AGG | - | chr1.1:18530084-18530103 | MS.gene026445:intron | 30.0% | |
| TCTTGAACAATATAGGGTTT+AGG | - | chr1.1:18529637-18529656 | MS.gene026445:intron | 30.0% | |
| TTCAATCTCCTTAATTGTGA+TGG | + | chr1.1:18527323-18527342 | None:intergenic | 30.0% | |
| TTGAATTTGGAAGAAACACA+CGG | - | chr1.1:18526292-18526311 | MS.gene026445:intron | 30.0% | |
| TTGACTGACGTTTACAATTT+CGG | + | chr1.1:18528540-18528559 | None:intergenic | 30.0% | |
| ! | AATTGTGGTTTTCATACATG+GGG | - | chr1.1:18529449-18529468 | MS.gene026445:intron | 30.0% |
| ! | AATTGTGGTTTTCATACATG+GGG | + | chr1.1:18529468-18529449 | None:intergenic | 30.0% |
| ! | AGCTAGAAATCAAAGCTTTT+TGG | - | chr1.1:18527700-18527719 | MS.gene026445:CDS | 30.0% |
| ! | CAACTCATATTTTGTCATGA+AGG | - | chr1.1:18528955-18528974 | MS.gene026445:intron | 30.0% |
| ! | CTTGAACAATTTAGGGTTTA+GGG | - | chr1.1:18529750-18529769 | MS.gene026445:intron | 30.0% |
| ! | CTTTCAAAATGTTGCGATTT+TGG | - | chr1.1:18529225-18529244 | MS.gene026445:intron | 30.0% |
| ! | CTTTCAAAATGTTGCGATTT+TGG | + | chr1.1:18529244-18529225 | None:intergenic | 30.0% |
| ! | GAAGTGGCTAAATTCTAAAA+TGG | + | chr1.1:18526873-18526892 | None:intergenic | 30.0% |
| ! | TCTTGAACAATTTAGGGTTT+AGG | - | chr1.1:18529749-18529768 | MS.gene026445:intron | 30.0% |
| ! | TGAGTTGAACGATAAATTCA+AGG | - | chr1.1:18528020-18528039 | MS.gene026445:intron | 30.0% |
| ! | TTCTAGAAGCAAAAACACAA+GGG | - | chr1.1:18527589-18527608 | MS.gene026445:intron | 30.0% |
| ! | TTTCTAGAAGCAAAAACACA+AGG | - | chr1.1:18527588-18527607 | MS.gene026445:intron | 30.0% |
| !! | ATCGCAACATTTTGAAAGTT+AGG | - | chr1.1:18529479-18529498 | MS.gene026445:CDS | 30.0% |
| !! | ATCGCAACATTTTGAAAGTT+AGG | + | chr1.1:18529498-18529479 | None:intergenic | 30.0% |
| !! | GGATTTGGATCCTTTTATTT+TGG | - | chr1.1:18529177-18529196 | MS.gene026445:intron | 30.0% |
| !! | TCATGTTTGGTGTCATTATA+GGG | - | chr1.1:18526018-18526037 | MS.gene026445:CDS | 30.0% |
| !! | TCGCAACATTTTGAAAGTTA+GGG | - | chr1.1:18529480-18529499 | MS.gene026445:CDS | 30.0% |
| !! | TCGCAACATTTTGAAAGTTA+GGG | + | chr1.1:18529499-18529480 | None:intergenic | 30.0% |
| !! | TTCAGAAAGCATTGTTACTT+TGG | - | chr1.1:18527195-18527214 | MS.gene026445:intron | 30.0% |
| !!! | ATCCTTTTATTTTGGCGAAA+GGG | - | chr1.1:18529185-18529204 | MS.gene026445:intron | 30.0% |
| !!! | CTATAATACGCTGCTTTTAT+TGG | + | chr1.1:18530128-18530147 | None:intergenic | 30.0% |
| !!! | TTTTGAAATGGGAACCTTAT+GGG | + | chr1.1:18529714-18529733 | None:intergenic | 30.0% |
| AAAACTATTGAGATAGGGGA+TGG | + | chr1.1:18527431-18527450 | None:intergenic | 35.0% | |
| AACTCTGCATACACTTCATT+TGG | - | chr1.1:18528419-18528438 | MS.gene026445:intron | 35.0% | |
| AAGTTACATGCAAAGATACC+CGG | - | chr1.1:18529934-18529953 | MS.gene026445:intron | 35.0% | |
| AATCTCTGCAGATATTCGTT+TGG | + | chr1.1:18526603-18526622 | None:intergenic | 35.0% | |
| AATTACCTTGGCAAAGTACA+TGG | + | chr1.1:18529053-18529072 | None:intergenic | 35.0% | |
| ACCATTAGACTATCCAATTC+TGG | + | chr1.1:18528287-18528306 | None:intergenic | 35.0% | |
| AGGTTAAAAATCAACGGTAG+AGG | - | chr1.1:18528040-18528059 | MS.gene026445:intron | 35.0% | |
| ATGCACAATAAGTGGAAAGA+GGG | + | chr1.1:18528931-18528950 | None:intergenic | 35.0% | |
| ATTACCTTGGCAAAGTACAT+GGG | + | chr1.1:18529052-18529071 | None:intergenic | 35.0% | |
| CATATTTCCCTAAACATAGG+GGG | - | chr1.1:18529422-18529441 | MS.gene026445:intron | 35.0% | |
| CATATTTCCCTTATGTTAGG+GGG | - | chr1.1:18529390-18529409 | MS.gene026445:intron | 35.0% | |
| CCATTAGACTATCCAATTCT+GGG | + | chr1.1:18528286-18528305 | None:intergenic | 35.0% | |
| CTAATATGCATCAAACCTTG+TGG | + | chr1.1:18529907-18529926 | None:intergenic | 35.0% | |
| GAACGGTATATCAATGCAAA+TGG | + | chr1.1:18529087-18529106 | None:intergenic | 35.0% | |
| GACATTGAAAACCAAACTAG+TGG | - | chr1.1:18527383-18527402 | MS.gene026445:intron | 35.0% | |
| GAGCATATTTCCCTAAACAT+AGG | - | chr1.1:18529419-18529438 | MS.gene026445:intron | 35.0% | |
| GCAAAAATAGCTCATTGAAG+TGG | + | chr1.1:18526889-18526908 | None:intergenic | 35.0% | |
| GCACTACAAAATCATGTTTG+GGG | + | chr1.1:18527838-18527857 | None:intergenic | 35.0% | |
| GCAGCGTATTATAGTAGATA+TGG | - | chr1.1:18530134-18530153 | MS.gene026445:intron | 35.0% | |
| GCATATTTCCCTAAACATAG+GGG | - | chr1.1:18529421-18529440 | MS.gene026445:intron | 35.0% | |
| GCTGTTAAATCAGATACATC+AGG | - | chr1.1:18530173-18530192 | MS.gene026445:CDS | 35.0% | |
| GGAGACACAAAAAATTACCT+TGG | + | chr1.1:18529065-18529084 | None:intergenic | 35.0% | |
| GTATCTTTGCATGTAACTTG+TGG | + | chr1.1:18529933-18529952 | None:intergenic | 35.0% | |
| GTCAATGCTTAGAATGTTTG+AGG | - | chr1.1:18528892-18528911 | MS.gene026445:intron | 35.0% | |
| GTTGGATTATGCACAATAAG+TGG | + | chr1.1:18528939-18528958 | None:intergenic | 35.0% | |
| GTTTGGATGCAATCATGTAA+AGG | - | chr1.1:18527928-18527947 | MS.gene026445:intron | 35.0% | |
| TACCCTTTCGCCAAAATAAA+AGG | + | chr1.1:18529190-18529209 | None:intergenic | 35.0% | |
| TATAGTTAACCTAGTTGACG+CGG | + | chr1.1:18527156-18527175 | None:intergenic | 35.0% | |
| TATGCACAATAAGTGGAAAG+AGG | + | chr1.1:18528932-18528951 | None:intergenic | 35.0% | |
| TTATAGGGTTGACGAAATCA+CGG | - | chr1.1:18526033-18526052 | MS.gene026445:CDS | 35.0% | |
| TTATTCAAATCCTTGCTCAC+AGG | - | chr1.1:18526516-18526535 | MS.gene026445:intron | 35.0% | |
| TTGCATATGTAAGTACACCA+CGG | - | chr1.1:18528252-18528271 | MS.gene026445:intron | 35.0% | |
| TTTATCGTTTGCCATCCATT+TGG | - | chr1.1:18529879-18529898 | MS.gene026445:intron | 35.0% | |
| TTTCAATGTCATGCTCAAGA+GGG | + | chr1.1:18527373-18527392 | None:intergenic | 35.0% | |
| ! | AACTTTGAAAACTGCTGAGA+AGG | - | chr1.1:18529283-18529302 | MS.gene026445:intron | 35.0% |
| ! | ATTGTGGTTTTCATACATGG+GGG | - | chr1.1:18529450-18529469 | MS.gene026445:intron | 35.0% |
| ! | ATTGTGGTTTTCATACATGG+GGG | + | chr1.1:18529469-18529450 | None:intergenic | 35.0% |
| ! | ATTTTGCGCAAGTCAATGAA+GGG | - | chr1.1:18530038-18530057 | MS.gene026445:intron | 35.0% |
| ! | CTCAGCAGTTTTCAAAGTTA+GGG | + | chr1.1:18529282-18529301 | None:intergenic | 35.0% |
| ! | CTTTTAACCCCCTAACATAA+GGG | + | chr1.1:18529400-18529419 | None:intergenic | 35.0% |
| ! | GATTTTGTAGTGCTTGATTC+TGG | - | chr1.1:18527845-18527864 | MS.gene026445:intron | 35.0% |
| ! | TACAAAATCATGTTTGGGGT+TGG | + | chr1.1:18527834-18527853 | None:intergenic | 35.0% |
| ! | TCAGCAGTTTTCAAAGTTAG+GGG | + | chr1.1:18529281-18529300 | None:intergenic | 35.0% |
| ! | TCTCAGCAGTTTTCAAAGTT+AGG | + | chr1.1:18529283-18529302 | None:intergenic | 35.0% |
| ! | TCTTTTAACCCCCTAACATA+AGG | + | chr1.1:18529401-18529420 | None:intergenic | 35.0% |
| ! | TGGAGCCCAATGAATTTTAA+TGG | + | chr1.1:18529571-18529590 | None:intergenic | 35.0% |
| ! | TTTTCAATGTCATGCTCAAG+AGG | + | chr1.1:18527374-18527393 | None:intergenic | 35.0% |
| !! | AACATTTTGAAAGTTAGGGG+GGG | - | chr1.1:18529484-18529503 | MS.gene026445:CDS | 35.0% |
| !! | AACATTTTGAAAGTTAGGGG+GGG | + | chr1.1:18529503-18529484 | None:intergenic | 35.0% |
| !! | CAACATTTTGAAAGTTAGGG+GGG | - | chr1.1:18529483-18529502 | MS.gene026445:CDS | 35.0% |
| !! | CAACATTTTGAAAGTTAGGG+GGG | + | chr1.1:18529502-18529483 | None:intergenic | 35.0% |
| !! | CGCAACATTTTGAAAGTTAG+GGG | - | chr1.1:18529481-18529500 | MS.gene026445:CDS | 35.0% |
| !! | CGCAACATTTTGAAAGTTAG+GGG | + | chr1.1:18529500-18529481 | None:intergenic | 35.0% |
| !! | CTCATGTTTGGTGTCATTAT+AGG | - | chr1.1:18526017-18526036 | MS.gene026445:CDS | 35.0% |
| !! | GCAACATTTTGAAAGTTAGG+GGG | - | chr1.1:18529482-18529501 | MS.gene026445:CDS | 35.0% |
| !! | GCAACATTTTGAAAGTTAGG+GGG | + | chr1.1:18529501-18529482 | None:intergenic | 35.0% |
| !! | TCTCTTGGGTACTGATTATT+AGG | - | chr1.1:18530220-18530239 | MS.gene026445:CDS | 35.0% |
| !!! | GATCCTTTTATTTTGGCGAA+AGG | - | chr1.1:18529184-18529203 | MS.gene026445:intron | 35.0% |
| !!! | GTTGTACACTTTTTGGGATT+TGG | - | chr1.1:18529162-18529181 | MS.gene026445:intron | 35.0% |
| !!! | GTTTTGAAATGGGAACCTTA+TGG | + | chr1.1:18529715-18529734 | None:intergenic | 35.0% |
| !!! | TTTTGGTTGACTTGAGTTTG+AGG | - | chr1.1:18527717-18527736 | MS.gene026445:CDS | 35.0% |
| AAATCAGGGGAGAAGAGAAT+AGG | - | chr1.1:18528332-18528351 | MS.gene026445:intron | 40.0% | |
| AACTAGTGGTGATCACAAGA+AGG | - | chr1.1:18527397-18527416 | MS.gene026445:intron | 40.0% | |
| AAGCTGCACAAAGCTTTCAA+AGG | - | chr1.1:18525911-18525930 | MS.gene026445:CDS | 40.0% | |
| ATCGATAACAACCCGATAAG+AGG | + | chr1.1:18527097-18527116 | None:intergenic | 40.0% | |
| CCCAGAATTGGATAGTCTAA+TGG | - | chr1.1:18528283-18528302 | MS.gene026445:intron | 40.0% | |
| CGATAAGATCTCCCTCTTAT+CGG | - | chr1.1:18527082-18527101 | MS.gene026445:CDS | 40.0% | |
| CTCGTACACCATCACAATTA+AGG | - | chr1.1:18527312-18527331 | MS.gene026445:intron | 40.0% | |
| GAGGGGAATGATAATTTGAG+AGG | + | chr1.1:18527355-18527374 | None:intergenic | 40.0% | |
| GATAAGATCTCCCTCTTATC+GGG | - | chr1.1:18527083-18527102 | MS.gene026445:CDS | 40.0% | |
| GCAGATATTCGTTTGGAAAG+TGG | + | chr1.1:18526596-18526615 | None:intergenic | 40.0% | |
| GCGATAAAGAGTGAAACATC+TGG | - | chr1.1:18528977-18528996 | MS.gene026445:intron | 40.0% | |
| GGAACCTTATGGGATCAAAT+GGG | + | chr1.1:18529704-18529723 | None:intergenic | 40.0% | |
| GTTAGTAGCACATCGTAGTA+TGG | + | chr1.1:18529026-18529045 | None:intergenic | 40.0% | |
| TCAAACCTTGTGGAACCAAA+TGG | + | chr1.1:18529897-18529916 | None:intergenic | 40.0% | |
| TCGATAACAACCCGATAAGA+GGG | + | chr1.1:18527096-18527115 | None:intergenic | 40.0% | |
| TCTTGGGTGTGACACAAAAA+GGG | - | chr1.1:18526493-18526512 | MS.gene026445:intron | 40.0% | |
| TCTTGTGATCACCACTAGTT+TGG | + | chr1.1:18527397-18527416 | None:intergenic | 40.0% | |
| TGAAAGAAGCAGCACACATT+TGG | - | chr1.1:18528388-18528407 | MS.gene026445:intron | 40.0% | |
| TGATGGTATAACTGGAGGTA+CGG | + | chr1.1:18525873-18525892 | None:intergenic | 40.0% | |
| TTCAATGTCATGCTCAAGAG+GGG | + | chr1.1:18527372-18527391 | None:intergenic | 40.0% | |
| ! | CAGCAGTTTTCAAAGTTAGG+GGG | + | chr1.1:18529280-18529299 | None:intergenic | 40.0% |
| ! | CGGTCAACTTTTAGTGTTAG+AGG | - | chr1.1:18528633-18528652 | MS.gene026445:intron | 40.0% |
| ! | GATTTTGCGCAAGTCAATGA+AGG | - | chr1.1:18530037-18530056 | MS.gene026445:intron | 40.0% |
| ! | TATAACTGGAGGTACGGTTA+AGG | + | chr1.1:18525867-18525886 | None:intergenic | 40.0% |
| ! | TTGTGGTTTTCATACATGGG+GGG | - | chr1.1:18529451-18529470 | MS.gene026445:intron | 40.0% |
| ! | TTGTGGTTTTCATACATGGG+GGG | + | chr1.1:18529470-18529451 | None:intergenic | 40.0% |
| !! | AATTTTGGCCCCCTATGTTT+AGG | + | chr1.1:18529433-18529452 | None:intergenic | 40.0% |
| !! | ATTTTGGCCCCCTATGTTTA+GGG | + | chr1.1:18529432-18529451 | None:intergenic | 40.0% |
| !!! | ACATCTGGCTCTTTTATGAG+TGG | - | chr1.1:18528992-18529011 | MS.gene026445:intron | 40.0% |
| AACATAGGGGGCCAAAATTG+TGG | - | chr1.1:18529434-18529453 | MS.gene026445:intron | 45.0% | |
| AAGTTAGGGGGCCAAAATTG+TGG | + | chr1.1:18529268-18529287 | None:intergenic | 45.0% | |
| ACCTTATGGGATCAAATGGG+CGG | + | chr1.1:18529701-18529720 | None:intergenic | 45.0% | |
| ACCTTGTGGAACCAAATGGA+TGG | + | chr1.1:18529893-18529912 | None:intergenic | 45.0% | |
| AGAGATTCGTGGTCATCTCA+AGG | - | chr1.1:18526616-18526635 | MS.gene026445:intron | 45.0% | |
| AGCTTCTTAGCATCTTCACG+AGG | + | chr1.1:18525896-18525915 | None:intergenic | 45.0% | |
| CGAATATCTGCAGAGATTCG+TGG | - | chr1.1:18526605-18526624 | MS.gene026445:intron | 45.0% | |
| GACACCAAACATGAGCAACA+TGG | + | chr1.1:18526012-18526031 | None:intergenic | 45.0% | |
| GACACCATGTTGCTCATGTT+TGG | - | chr1.1:18526005-18526024 | MS.gene026445:CDS | 45.0% | |
| GACTTGCGCAAAATCTGCAA+AGG | + | chr1.1:18530032-18530051 | None:intergenic | 45.0% | |
| GCGACACGTGTCCAAAAAAA+GGG | - | chr1.1:18529305-18529324 | MS.gene026445:intron | 45.0% | |
| GGGAACCTTATGGGATCAAA+TGG | + | chr1.1:18529705-18529724 | None:intergenic | 45.0% | |
| GTAAGTACACCACGGTATGA+AGG | - | chr1.1:18528260-18528279 | MS.gene026445:intron | 45.0% | |
| GTCTTGGGTGTGACACAAAA+AGG | - | chr1.1:18526492-18526511 | MS.gene026445:intron | 45.0% | |
| TTAGCATCTTCACGAGGTGA+TGG | + | chr1.1:18525890-18525909 | None:intergenic | 45.0% | |
| TTGTAGCGCAAGTAACCGAT+AGG | + | chr1.1:18526976-18526995 | None:intergenic | 45.0% | |
| ! | CGCAAGTCAATGAAGGGTAT+TGG | - | chr1.1:18530044-18530063 | MS.gene026445:intron | 45.0% |
| ! | GTTCTGAATTCCTGTGAGCA+AGG | + | chr1.1:18526529-18526548 | None:intergenic | 45.0% |
| ! | TCACGAGGTGATGGTATAAC+TGG | + | chr1.1:18525881-18525900 | None:intergenic | 45.0% |
| !! | GCAACATGGTGTCACAATGT+TGG | + | chr1.1:18525998-18526017 | None:intergenic | 45.0% |
| !! | TATTAATTATTTATTGTTAT+AGG | - | chr1.1:18526470-18526489 | MS.gene026445:intron | 5.0% |
| !!! | AATTTTACATTTATTTTTTA+AGG | + | chr1.1:18528191-18528210 | None:intergenic | 5.0% |
| !!! | TTATTTTTTATATTTTAAAC+CGG | + | chr1.1:18529956-18529975 | None:intergenic | 5.0% |
| AATTCTGGGCCTTCATACCG+TGG | + | chr1.1:18528272-18528291 | None:intergenic | 50.0% | |
| ACCTTAGCATCCCTACTTGG+AGG | + | chr1.1:18527230-18527249 | None:intergenic | 50.0% | |
| ACGGTATGAAGGCCCAGAAT+TGG | - | chr1.1:18528271-18528290 | MS.gene026445:intron | 50.0% | |
| ATCGTCTAACCGCGTCAACT+AGG | - | chr1.1:18527144-18527163 | MS.gene026445:intron | 50.0% | |
| CTCTCCCATGTACTTTGCCA+AGG | - | chr1.1:18529045-18529064 | MS.gene026445:intron | 50.0% | |
| GCTACCTTAGCATCCCTACT+TGG | + | chr1.1:18527233-18527252 | None:intergenic | 50.0% | |
| GCTGCATGATCCTCCAAGTA+GGG | - | chr1.1:18527217-18527236 | MS.gene026445:intron | 50.0% | |
| GGCGACACGTGTCCAAAAAA+AGG | - | chr1.1:18529304-18529323 | MS.gene026445:intron | 50.0% | |
| GTAGGGATGCTAAGGTAGCA+AGG | - | chr1.1:18527234-18527253 | MS.gene026445:intron | 50.0% | |
| TCCTCCAAGTAGGGATGCTA+AGG | - | chr1.1:18527226-18527245 | MS.gene026445:intron | 50.0% | |
| ! | CGAGGTGATGGTATAACTGG+AGG | + | chr1.1:18525878-18525897 | None:intergenic | 50.0% |
| ! | GCCATCCATTTGGTTCCACA+AGG | - | chr1.1:18529889-18529908 | MS.gene026445:intron | 50.0% |
| GCCGCCCATTTGATCCCATA+AGG | - | chr1.1:18529697-18529716 | MS.gene026445:intron | 55.0% | |
| GGCTGCATGATCCTCCAAGT+AGG | - | chr1.1:18527216-18527235 | MS.gene026445:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 18525857 | 18530241 | 18525857 | ID=MS.gene026445 |
| chr1.1 | mRNA | 18525857 | 18530241 | 18525857 | ID=MS.gene026445.t1;Parent=MS.gene026445 |
| chr1.1 | exon | 18530166 | 18530241 | 18530166 | ID=MS.gene026445.t1.exon1;Parent=MS.gene026445.t1 |
| chr1.1 | CDS | 18530166 | 18530241 | 18530166 | ID=cds.MS.gene026445.t1;Parent=MS.gene026445.t1 |
| chr1.1 | exon | 18529461 | 18529606 | 18529461 | ID=MS.gene026445.t1.exon2;Parent=MS.gene026445.t1 |
| chr1.1 | CDS | 18529461 | 18529606 | 18529461 | ID=cds.MS.gene026445.t1;Parent=MS.gene026445.t1 |
| chr1.1 | exon | 18528680 | 18528898 | 18528680 | ID=MS.gene026445.t1.exon3;Parent=MS.gene026445.t1 |
| chr1.1 | CDS | 18528680 | 18528898 | 18528680 | ID=cds.MS.gene026445.t1;Parent=MS.gene026445.t1 |
| chr1.1 | exon | 18527641 | 18527853 | 18527641 | ID=MS.gene026445.t1.exon4;Parent=MS.gene026445.t1 |
| chr1.1 | CDS | 18527641 | 18527853 | 18527641 | ID=cds.MS.gene026445.t1;Parent=MS.gene026445.t1 |
| chr1.1 | exon | 18527032 | 18527121 | 18527032 | ID=MS.gene026445.t1.exon5;Parent=MS.gene026445.t1 |
| chr1.1 | CDS | 18527032 | 18527121 | 18527032 | ID=cds.MS.gene026445.t1;Parent=MS.gene026445.t1 |
| chr1.1 | exon | 18525857 | 18526060 | 18525857 | ID=MS.gene026445.t1.exon6;Parent=MS.gene026445.t1 |
| chr1.1 | CDS | 18525857 | 18526060 | 18525857 | ID=cds.MS.gene026445.t1;Parent=MS.gene026445.t1 |
| Gene Sequence |
| Protein sequence |
