Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57291.t1 | QFP98439.1 | 100 | 315 | 0 | 0 | 1 | 315 | 1 | 315 | 2.30E-172 | 614.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57291.t1 | Q9XEE2 | 71.2 | 316 | 90 | 1 | 1 | 315 | 1 | 316 | 5.6e-127 | 455.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57291.t1 | Q42922 | 100.0 | 308 | 0 | 0 | 8 | 315 | 1 | 308 | 1.9e-168 | 601.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene57291 | -0.860884 | 1.51E-63 | -1.69E-46 |
| MS.gene04921 | MS.gene57291 | 0.842198 | 2.99E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene57291 | -0.826174 | 3.14E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene57291 | -0.81068 | 1.02E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene57291 | -0.830914 | 2.25E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene57291 | -0.836339 | 9.92E-57 | -1.69E-46 |
| MS.gene04932 | MS.gene57291 | 0.816997 | 4.14E-52 | -1.69E-46 |
| MS.gene049549 | MS.gene57291 | 0.802135 | 6.48E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene57291 | 0.823082 | 1.68E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene57291 | -0.850785 | 1.36E-60 | -1.69E-46 |
| MS.gene049790 | MS.gene57291 | 0.811207 | 7.86E-51 | -1.69E-46 |
| MS.gene050082 | MS.gene57291 | 0.846615 | 1.94E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene57291 | -0.814945 | 1.19E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene57291 | -0.830225 | 3.31E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene57291 | -0.8668 | 2.19E-65 | -1.69E-46 |
| MS.gene050323 | MS.gene57291 | -0.866933 | 1.98E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene57291 | -0.817514 | 3.17E-52 | -1.69E-46 |
| MS.gene050338 | MS.gene57291 | 0.871686 | 5.66E-67 | -1.69E-46 |
| MS.gene050444 | MS.gene57291 | -0.845457 | 4.01E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene57291 | -0.869128 | 3.90E-66 | -1.69E-46 |
| MS.gene050504 | MS.gene57291 | -0.852902 | 3.40E-61 | -1.69E-46 |
| MS.gene050577 | MS.gene57291 | -0.860843 | 1.56E-63 | -1.69E-46 |
| MS.gene050612 | MS.gene57291 | -0.860758 | 1.65E-63 | -1.69E-46 |
| MS.gene050675 | MS.gene57291 | -0.84465 | 6.63E-59 | -1.69E-46 |
| MS.gene050697 | MS.gene57291 | -0.809249 | 2.08E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene57291 | -0.826054 | 3.35E-54 | -1.69E-46 |
| MS.gene050809 | MS.gene57291 | 0.802604 | 5.18E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene57291 | -0.826904 | 2.10E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene57291 | -0.852317 | 5.00E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene57291 | -0.850651 | 1.48E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene57291 | -0.842174 | 3.04E-58 | -1.69E-46 |
| MS.gene050986 | MS.gene57291 | -0.823383 | 1.43E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene57291 | 0.845963 | 2.93E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene57291 | 0.850113 | 2.10E-60 | -1.69E-46 |
| MS.gene051127 | MS.gene57291 | 0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene57291 | 0.801658 | 8.11E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene57291 | 0.878908 | 1.92E-69 | -1.69E-46 |
| MS.gene051268 | MS.gene57291 | -0.81812 | 2.31E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene57291 | -0.831956 | 1.24E-55 | -1.69E-46 |
| MS.gene051364 | MS.gene57291 | 0.815997 | 6.94E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene57291 | 0.809753 | 1.62E-50 | -1.69E-46 |
| MS.gene051422 | MS.gene57291 | 0.860328 | 2.23E-63 | -1.69E-46 |
| MS.gene051439 | MS.gene57291 | 0.807749 | 4.34E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene57291 | 0.816694 | 4.85E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene57291 | 0.815678 | 8.17E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene57291 | 0.890433 | 9.89E-74 | -1.69E-46 |
| MS.gene051863 | MS.gene57291 | 0.818549 | 1.85E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene57291 | -0.814686 | 1.36E-51 | -1.69E-46 |
| MS.gene051973 | MS.gene57291 | 0.812826 | 3.49E-51 | -1.69E-46 |
| MS.gene052129 | MS.gene57291 | 0.849258 | 3.63E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene57291 | -0.834664 | 2.63E-56 | -1.69E-46 |
| MS.gene052383 | MS.gene57291 | 0.801798 | 7.60E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene57291 | 0.813469 | 2.52E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene57291 | -0.818329 | 2.07E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene57291 | -0.825386 | 4.82E-54 | -1.69E-46 |
| MS.gene052494 | MS.gene57291 | 0.842932 | 1.91E-58 | -1.69E-46 |
| MS.gene052503 | MS.gene57291 | -0.821203 | 4.58E-53 | -1.69E-46 |
| MS.gene052606 | MS.gene57291 | 0.843885 | 1.06E-58 | -1.69E-46 |
| MS.gene052702 | MS.gene57291 | 0.826471 | 2.66E-54 | -1.69E-46 |
| MS.gene052710 | MS.gene57291 | 0.815055 | 1.12E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene57291 | -0.813382 | 2.63E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene57291 | -0.829963 | 3.84E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene57291 | -0.82128 | 4.39E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene57291 | -0.800164 | 1.64E-48 | -1.69E-46 |
| MS.gene053097 | MS.gene57291 | 0.833437 | 5.33E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene57291 | -0.82839 | 9.23E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene57291 | 0.836142 | 1.11E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene57291 | -0.821785 | 3.36E-53 | -1.69E-46 |
| MS.gene053568 | MS.gene57291 | 0.825601 | 4.29E-54 | -1.69E-46 |
| MS.gene053569 | MS.gene57291 | 0.800228 | 1.59E-48 | -1.69E-46 |
| MS.gene053824 | MS.gene57291 | -0.823776 | 1.15E-53 | -1.69E-46 |
| MS.gene053887 | MS.gene57291 | 0.825016 | 5.90E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene57291 | -0.811224 | 7.79E-51 | -1.69E-46 |
| MS.gene054181 | MS.gene57291 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene57291 | -0.820016 | 8.57E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene57291 | -0.810733 | 9.95E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene57291 | 0.844626 | 6.73E-59 | -1.69E-46 |
| MS.gene054707 | MS.gene57291 | 0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene57291 | -0.876111 | 1.81E-68 | -1.69E-46 |
| MS.gene05483 | MS.gene57291 | 0.800317 | 1.53E-48 | -1.69E-46 |
| MS.gene054884 | MS.gene57291 | 0.817689 | 2.90E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene57291 | -0.851834 | 6.86E-61 | -1.69E-46 |
| MS.gene055158 | MS.gene57291 | 0.827699 | 1.35E-54 | -1.69E-46 |
| MS.gene055251 | MS.gene57291 | 0.886181 | 4.27E-72 | -1.69E-46 |
| MS.gene055362 | MS.gene57291 | -0.834213 | 3.41E-56 | -1.69E-46 |
| MS.gene055388 | MS.gene57291 | 0.8034 | 3.55E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene57291 | -0.857322 | 1.77E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene57291 | -0.838172 | 3.37E-57 | -1.69E-46 |
| MS.gene055729 | MS.gene57291 | 0.824179 | 9.29E-54 | -1.69E-46 |
| MS.gene055730 | MS.gene57291 | 0.832939 | 7.10E-56 | -1.69E-46 |
| MS.gene055731 | MS.gene57291 | 0.825595 | 4.30E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene57291 | -0.863868 | 1.83E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene57291 | -0.853707 | 2.00E-61 | -1.69E-46 |
| MS.gene055751 | MS.gene57291 | -0.872422 | 3.22E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene57291 | -0.82568 | 4.11E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene57291 | -0.886184 | 4.26E-72 | -1.69E-46 |
| MS.gene05590 | MS.gene57291 | 0.80922 | 2.11E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene57291 | 0.872998 | 2.07E-67 | -1.69E-46 |
| MS.gene055977 | MS.gene57291 | 0.803289 | 3.74E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene57291 | 0.855249 | 7.16E-62 | -1.69E-46 |
| MS.gene056200 | MS.gene57291 | 0.812959 | 3.26E-51 | -1.69E-46 |
| MS.gene056224 | MS.gene57291 | 0.82275 | 2.00E-53 | -1.69E-46 |
| MS.gene056266 | MS.gene57291 | -0.844175 | 8.90E-59 | -1.69E-46 |
| MS.gene056354 | MS.gene57291 | 0.835597 | 1.53E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene57291 | -0.844052 | 9.60E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene57291 | -0.879712 | 9.96E-70 | -1.69E-46 |
| MS.gene056510 | MS.gene57291 | -0.821384 | 4.16E-53 | -1.69E-46 |
| MS.gene056590 | MS.gene57291 | 0.830897 | 2.27E-55 | -1.69E-46 |
| MS.gene056591 | MS.gene57291 | 0.831991 | 1.22E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene57291 | -0.8322 | 1.08E-55 | -1.69E-46 |
| MS.gene056688 | MS.gene57291 | 0.816302 | 5.93E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene57291 | -0.830054 | 3.64E-55 | -1.69E-46 |
| MS.gene056694 | MS.gene57291 | 0.866215 | 3.36E-65 | -1.69E-46 |
| MS.gene056697 | MS.gene57291 | 0.871739 | 5.43E-67 | -1.69E-46 |
| MS.gene056748 | MS.gene57291 | 0.81041 | 1.17E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene57291 | 0.881191 | 2.95E-70 | -1.69E-46 |
| MS.gene056857 | MS.gene57291 | 0.830432 | 2.95E-55 | -1.69E-46 |
| MS.gene056988 | MS.gene57291 | 0.804299 | 2.31E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene57291 | -0.802129 | 6.49E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene57291 | 0.805024 | 1.63E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene57291 | 0.800159 | 1.64E-48 | -1.69E-46 |
| MS.gene057548 | MS.gene57291 | 0.825774 | 3.90E-54 | -1.69E-46 |
| MS.gene057549 | MS.gene57291 | 0.84978 | 2.60E-60 | -1.69E-46 |
| MS.gene057606 | MS.gene57291 | 0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene057717 | MS.gene57291 | 0.838947 | 2.12E-57 | -1.69E-46 |
| MS.gene057768 | MS.gene57291 | 0.855755 | 5.10E-62 | -1.69E-46 |
| MS.gene057831 | MS.gene57291 | -0.810675 | 1.02E-50 | -1.69E-46 |
| MS.gene058067 | MS.gene57291 | 0.818562 | 1.84E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene57291 | 0.877096 | 8.27E-69 | -1.69E-46 |
| MS.gene058099 | MS.gene57291 | 0.836678 | 8.13E-57 | -1.69E-46 |
| MS.gene058111 | MS.gene57291 | 0.812525 | 4.06E-51 | -1.69E-46 |
| MS.gene058117 | MS.gene57291 | 0.816875 | 4.41E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene57291 | -0.80771 | 4.43E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene57291 | 0.825777 | 3.90E-54 | -1.69E-46 |
| MS.gene058173 | MS.gene57291 | 0.810704 | 1.01E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene57291 | 0.828679 | 7.86E-55 | -1.69E-46 |
| MS.gene058268 | MS.gene57291 | 0.853228 | 2.75E-61 | -1.69E-46 |
| MS.gene058269 | MS.gene57291 | 0.849487 | 3.13E-60 | -1.69E-46 |
| MS.gene058334 | MS.gene57291 | 0.888634 | 4.96E-73 | -1.69E-46 |
| MS.gene05837 | MS.gene57291 | -0.825086 | 5.68E-54 | -1.69E-46 |
| MS.gene058382 | MS.gene57291 | 0.885622 | 6.94E-72 | -1.69E-46 |
| MS.gene058419 | MS.gene57291 | -0.843476 | 1.37E-58 | -1.69E-46 |
| MS.gene058452 | MS.gene57291 | 0.831832 | 1.33E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene57291 | -0.82529 | 5.08E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene57291 | 0.844259 | 8.44E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene57291 | -0.851979 | 6.24E-61 | -1.69E-46 |
| MS.gene059022 | MS.gene57291 | -0.847253 | 1.30E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene57291 | -0.837439 | 5.20E-57 | -1.69E-46 |
| MS.gene059045 | MS.gene57291 | 0.812206 | 4.76E-51 | -1.69E-46 |
| MS.gene059070 | MS.gene57291 | 0.806427 | 8.27E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene57291 | 0.870886 | 1.04E-66 | -1.69E-46 |
| MS.gene059315 | MS.gene57291 | 0.82182 | 3.29E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene57291 | 0.801085 | 1.06E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene57291 | -0.810973 | 8.83E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene57291 | -0.846388 | 2.24E-59 | -1.69E-46 |
| MS.gene059685 | MS.gene57291 | 0.809448 | 1.88E-50 | -1.69E-46 |
| MS.gene059699 | MS.gene57291 | 0.834087 | 3.67E-56 | -1.69E-46 |
| MS.gene059701 | MS.gene57291 | 0.833025 | 6.76E-56 | -1.69E-46 |
| MS.gene059703 | MS.gene57291 | 0.852409 | 4.70E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene57291 | -0.810991 | 8.75E-51 | -1.69E-46 |
| MS.gene059756 | MS.gene57291 | -0.801501 | 8.74E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene57291 | -0.873126 | 1.87E-67 | -1.69E-46 |
| MS.gene059953 | MS.gene57291 | 0.822788 | 1.96E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene57291 | 0.821978 | 3.03E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene57291 | -0.855481 | 6.13E-62 | -1.69E-46 |
| MS.gene060076 | MS.gene57291 | 0.842763 | 2.12E-58 | -1.69E-46 |
| MS.gene06027 | MS.gene57291 | -0.818468 | 1.93E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene57291 | 0.870564 | 1.33E-66 | -1.69E-46 |
| MS.gene06042 | MS.gene57291 | 0.839809 | 1.27E-57 | -1.69E-46 |
| MS.gene060561 | MS.gene57291 | 0.801964 | 7.02E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene57291 | 0.843415 | 1.42E-58 | -1.69E-46 |
| MS.gene060595 | MS.gene57291 | 0.823312 | 1.48E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene57291 | -0.825653 | 4.17E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene57291 | -0.858346 | 8.77E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene57291 | -0.852761 | 3.73E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene57291 | -0.843121 | 1.70E-58 | -1.69E-46 |
| MS.gene060823 | MS.gene57291 | 0.840672 | 7.55E-58 | -1.69E-46 |
| MS.gene06084 | MS.gene57291 | 0.838678 | 2.49E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene57291 | -0.876382 | 1.46E-68 | -1.69E-46 |
| MS.gene061044 | MS.gene57291 | 0.91984 | 2.72E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57291 | MS.gene026445 | PPI |
| MS.gene047030 | MS.gene57291 | PPI |
| MS.gene57291 | MS.gene89484 | PPI |
| MS.gene57291 | MS.gene040097 | PPI |
| MS.gene57291 | MS.gene27444 | PPI |
| MS.gene57291 | MS.gene28077 | PPI |
| MS.gene57291 | MS.gene058336 | PPI |
| MS.gene57291 | MS.gene035327 | PPI |
| MS.gene57291 | MS.gene065031 | PPI |
| MS.gene57291 | MS.gene67887 | PPI |
| MS.gene57291 | MS.gene035891 | PPI |
| MS.gene57291 | MS.gene029299 | PPI |
| MS.gene57291 | MS.gene041553 | PPI |
| MS.gene57291 | MS.gene45772 | PPI |
| MS.gene016642 | MS.gene57291 | PPI |
| MS.gene57291 | MS.gene010215 | PPI |
| MS.gene57291 | MS.gene067369 | PPI |
| MS.gene57291 | MS.gene93736 | PPI |
| MS.gene57291 | MS.gene92405 | PPI |
| MS.gene57291 | MS.gene043964 | PPI |
| MS.gene57291 | MS.gene036493 | PPI |
| MS.gene57291 | MS.gene040887 | PPI |
| MS.gene57291 | MS.gene85401 | PPI |
| MS.gene57291 | MS.gene87117 | PPI |
| MS.gene57291 | MS.gene030809 | PPI |
| MS.gene57291 | MS.gene76197 | PPI |
| MS.gene57291 | MS.gene047020 | PPI |
| MS.gene57291 | MS.gene061777 | PPI |
| MS.gene57291 | MS.gene55897 | PPI |
| MS.gene57291 | MS.gene74945 | PPI |
| MS.gene57291 | MS.gene056195 | PPI |
| MS.gene57291 | MS.gene00058 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57291.t1 | MTR_0276s0050 | 97.460 | 315 | 8 | 0 | 1 | 315 | 1 | 315 | 0.0 | 625 |
| MS.gene57291.t1 | MTR_5g063670 | 66.349 | 315 | 106 | 0 | 1 | 315 | 1 | 315 | 3.63e-155 | 437 |
| MS.gene57291.t1 | MTR_8g038210 | 51.429 | 315 | 151 | 2 | 1 | 315 | 1 | 313 | 6.48e-105 | 309 |
| MS.gene57291.t1 | MTR_3g018790 | 50.476 | 315 | 155 | 1 | 1 | 315 | 1 | 314 | 1.46e-103 | 306 |
| MS.gene57291.t1 | MTR_8g038220 | 50.962 | 312 | 152 | 1 | 1 | 312 | 1 | 311 | 1.80e-103 | 305 |
| MS.gene57291.t1 | MTR_3g018780 | 49.524 | 315 | 157 | 2 | 1 | 314 | 1 | 314 | 1.27e-102 | 303 |
| MS.gene57291.t1 | MTR_8g038220 | 51.118 | 313 | 149 | 2 | 1 | 312 | 1 | 310 | 1.81e-102 | 303 |
| MS.gene57291.t1 | MTR_8g038180 | 50.641 | 312 | 153 | 1 | 1 | 312 | 1 | 311 | 1.86e-100 | 298 |
| MS.gene57291.t1 | MTR_8g038210 | 49.524 | 315 | 157 | 2 | 1 | 315 | 1 | 313 | 9.53e-100 | 296 |
| MS.gene57291.t1 | MTR_2g031980 | 43.234 | 303 | 172 | 0 | 12 | 314 | 11 | 313 | 2.15e-89 | 270 |
| MS.gene57291.t1 | MTR_8g038150 | 42.857 | 315 | 177 | 1 | 1 | 312 | 1 | 315 | 5.41e-82 | 251 |
| MS.gene57291.t1 | MTR_3g018790 | 49.587 | 242 | 122 | 0 | 74 | 315 | 19 | 260 | 3.92e-75 | 231 |
| MS.gene57291.t1 | MTR_8g107640 | 37.855 | 317 | 193 | 3 | 1 | 315 | 1 | 315 | 1.86e-72 | 226 |
| MS.gene57291.t1 | MTR_1g033560 | 36.076 | 316 | 198 | 3 | 1 | 314 | 1 | 314 | 1.62e-66 | 211 |
| MS.gene57291.t1 | MTR_6g071605 | 35.783 | 313 | 199 | 2 | 1 | 312 | 1 | 312 | 3.02e-65 | 208 |
| MS.gene57291.t1 | MTR_6g071615 | 37.580 | 314 | 192 | 3 | 1 | 312 | 1 | 312 | 1.41e-64 | 206 |
| MS.gene57291.t1 | MTR_1g112520 | 36.624 | 314 | 195 | 3 | 1 | 312 | 1 | 312 | 2.30e-62 | 201 |
| MS.gene57291.t1 | MTR_6g071595 | 36.943 | 314 | 194 | 3 | 1 | 312 | 1 | 312 | 4.14e-56 | 184 |
| MS.gene57291.t1 | MTR_3g018920 | 44.811 | 212 | 84 | 2 | 1 | 212 | 1 | 179 | 1.58e-53 | 173 |
| MS.gene57291.t1 | MTR_8g038170 | 36.792 | 318 | 172 | 8 | 14 | 312 | 4 | 311 | 4.59e-50 | 169 |
| MS.gene57291.t1 | MTR_8g038170 | 36.792 | 318 | 172 | 8 | 14 | 312 | 4 | 311 | 4.59e-50 | 169 |
| MS.gene57291.t1 | MTR_6g071595 | 35.317 | 252 | 159 | 3 | 1 | 250 | 1 | 250 | 2.45e-38 | 137 |
| MS.gene57291.t1 | MTR_6g028030 | 26.277 | 274 | 194 | 5 | 45 | 310 | 34 | 307 | 6.37e-23 | 97.1 |
| MS.gene57291.t1 | MTR_3g018925 | 47.917 | 96 | 50 | 0 | 220 | 315 | 14 | 109 | 3.54e-22 | 89.7 |
| MS.gene57291.t1 | MTR_8g038090 | 43.478 | 69 | 38 | 1 | 245 | 312 | 22 | 90 | 3.01e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57291.t1 | AT5G65020 | 71.656 | 314 | 88 | 1 | 1 | 313 | 1 | 314 | 4.23e-170 | 474 |
| MS.gene57291.t1 | AT5G10230 | 71.019 | 314 | 91 | 0 | 1 | 314 | 1 | 314 | 1.80e-167 | 468 |
| MS.gene57291.t1 | AT5G10220 | 69.304 | 316 | 95 | 1 | 1 | 314 | 1 | 316 | 2.95e-162 | 455 |
| MS.gene57291.t1 | AT5G65020 | 72.664 | 289 | 78 | 1 | 26 | 313 | 11 | 299 | 2.49e-157 | 442 |
| MS.gene57291.t1 | AT1G35720 | 66.772 | 316 | 104 | 1 | 1 | 315 | 1 | 316 | 8.21e-155 | 436 |
| MS.gene57291.t1 | AT5G12380 | 51.118 | 313 | 152 | 1 | 1 | 313 | 1 | 312 | 1.38e-110 | 323 |
| MS.gene57291.t1 | AT2G38760 | 42.138 | 318 | 178 | 2 | 1 | 312 | 1 | 318 | 1.58e-82 | 252 |
| MS.gene57291.t1 | AT1G68090 | 37.380 | 313 | 195 | 1 | 1 | 312 | 1 | 313 | 8.17e-64 | 204 |
| MS.gene57291.t1 | AT1G68090 | 37.349 | 249 | 151 | 3 | 1 | 244 | 1 | 249 | 2.02e-43 | 149 |
| MS.gene57291.t1 | AT2G38750 | 35.526 | 304 | 171 | 6 | 26 | 311 | 2 | 298 | 2.79e-43 | 150 |
| MS.gene57291.t1 | AT2G38750 | 35.505 | 307 | 173 | 6 | 23 | 311 | 16 | 315 | 3.97e-43 | 151 |
Find 62 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGAGGGCAGCAATTA+AGG | 0.189714 | 4.1:-10247469 | MS.gene57291:CDS |
| AATCACTATAACAATGAGTT+TGG | 0.243154 | 4.1:-10247828 | MS.gene57291:CDS |
| ATCTCCACTTGAACTTCTTA+AGG | 0.350377 | 4.1:-10248455 | MS.gene57291:CDS |
| TCATGAGAAGATTGCGGATA+AGG | 0.357945 | 4.1:-10247919 | MS.gene57291:CDS |
| GATGTTGCCTATCATACTTC+TGG | 0.369007 | 4.1:-10248388 | MS.gene57291:CDS |
| GCAATTGACAAAGACACTTC+TGG | 0.392622 | 4.1:-10247279 | MS.gene57291:CDS |
| AGTTCCTCAAAATATTTCTC+AGG | 0.401647 | 4.1:+10247435 | None:intergenic |
| TTATTGAGGGCAGCAATTAA+GGG | 0.414248 | 4.1:-10247468 | MS.gene57291:CDS |
| ATCACTATAACAATGAGTTT+GGG | 0.415323 | 4.1:-10247827 | MS.gene57291:CDS |
| GAGGAACACTGTTTCTTCTC+TGG | 0.435446 | 4.1:+10247310 | None:intergenic |
| GCAGGATTTGGAAACTGATT+CGG | 0.447953 | 4.1:-10247508 | MS.gene57291:intron |
| TGTGGGCATACACCGTTATG+AGG | 0.458266 | 4.1:-10247988 | MS.gene57291:CDS |
| TTGTTGTTACAATCCTGATC+AGG | 0.458748 | 4.1:+10247880 | None:intergenic |
| ACAGGATGGGGAACGAATGA+AGG | 0.469249 | 4.1:-10248927 | MS.gene57291:intron |
| GATAGGCAACATCTTCTTCA+AGG | 0.470858 | 4.1:+10248398 | None:intergenic |
| ACAATCATGATGACCTGATC+AGG | 0.471756 | 4.1:-10247893 | MS.gene57291:CDS |
| ATGAATATCTGAAATTATTG+AGG | 0.486467 | 4.1:-10247482 | MS.gene57291:CDS |
| AGCTGTGCTGCTGTGGACAT+TGG | 0.493673 | 4.1:-10248569 | MS.gene57291:CDS |
| GAAAATTCTCCTTGCACTGA+TGG | 0.493991 | 4.1:-10247247 | MS.gene57291:CDS |
| GAGAAGAAACAGTGTTCCTC+TGG | 0.495918 | 4.1:-10247307 | MS.gene57291:CDS |
| GAGCTGCATTTCTATGAGCC+AGG | 0.520838 | 4.1:+10248889 | None:intergenic |
| CTTTAAGAAGATCTTCTCCA+TGG | 0.522934 | 4.1:+10248832 | None:intergenic |
| TGAATATCTGAAATTATTGA+GGG | 0.538168 | 4.1:-10247481 | MS.gene57291:CDS |
| TAGGCTGGCTATAAACAAGA+TGG | 0.541067 | 4.1:-10247409 | MS.gene57291:CDS |
| AAAATTCTCCTTGCACTGAT+GGG | 0.542533 | 4.1:-10247246 | MS.gene57291:CDS |
| AACAGAAAGCTGTGCTGCTG+TGG | 0.544066 | 4.1:-10248576 | MS.gene57291:intron |
| AATTGTTCACTGTCTTCTGA+TGG | 0.548405 | 4.1:+10249468 | None:intergenic |
| AAGTTCAAGTGGAGATCTTG+TGG | 0.549416 | 4.1:+10248462 | None:intergenic |
| GATGGAGAAGGAACGTGAGA+GGG | 0.549677 | 4.1:+10249486 | None:intergenic |
| TCTTGTTTATAGCCAGCCTA+AGG | 0.557307 | 4.1:+10247412 | None:intergenic |
| AGGCTTGATAATATCGATCC+TGG | 0.557589 | 4.1:-10248907 | MS.gene57291:CDS |
| GTTCCTCAAAATATTTCTCA+GGG | 0.565806 | 4.1:+10247436 | None:intergenic |
| GCTGCTGTGGACATTGGATC+CGG | 0.567043 | 4.1:-10248563 | MS.gene57291:CDS |
| GGGTCTGCGTGTAAGTTTCG+CGG | 0.567457 | 4.1:+10248853 | None:intergenic |
| GATGTCACCAGAAGTATGAT+AGG | 0.569427 | 4.1:+10248381 | None:intergenic |
| GGTTGATTTGCAGCGAATTG+CGG | 0.585356 | 4.1:-10247340 | MS.gene57291:CDS |
| AAGTGTCTTTGTCAATTGCA+CGG | 0.589714 | 4.1:+10247283 | None:intergenic |
| TTTAAGAAGATCTTCTCCAT+GGG | 0.594102 | 4.1:+10248833 | None:intergenic |
| TTGTCAATTGCACGGTCCAG+AGG | 0.595483 | 4.1:+10247291 | None:intergenic |
| TCACCTCATCTCCCTCATAA+CGG | 0.595788 | 4.1:+10247976 | None:intergenic |
| TGATGGAGAAGGAACGTGAG+AGG | 0.596195 | 4.1:+10249485 | None:intergenic |
| ATAGGCAACATCTTCTTCAA+GGG | 0.598603 | 4.1:+10248399 | None:intergenic |
| TGATTTGCAGCGAATTGCGG+AGG | 0.598869 | 4.1:-10247337 | MS.gene57291:CDS |
| TGAAAATGCTCTTACTAGAG+TGG | 0.606160 | 4.1:-10247379 | MS.gene57291:CDS |
| CATCATGTCCCATCAGTGCA+AGG | 0.606991 | 4.1:+10247238 | None:intergenic |
| ATTGCTTCATGAGAAGATTG+CGG | 0.611914 | 4.1:-10247925 | MS.gene57291:CDS |
| GTGGGCATACACCGTTATGA+GGG | 0.616438 | 4.1:-10247987 | MS.gene57291:CDS |
| GAAACTTACACGCAGACCCA+TGG | 0.623172 | 4.1:-10248849 | MS.gene57291:CDS |
| AGGCTGGCTATAAACAAGAT+GGG | 0.624496 | 4.1:-10247408 | MS.gene57291:CDS |
| AGATGAGGTGAACATGACAT+TGG | 0.629033 | 4.1:-10247964 | MS.gene57291:CDS |
| TAACGGTGTATGCCCACAAG+AGG | 0.631350 | 4.1:+10247993 | None:intergenic |
| CTCAAAATATTTCTCAGGGT+AGG | 0.640542 | 4.1:+10247440 | None:intergenic |
| TCACTGTCTTCTGATGGAGA+AGG | 0.641986 | 4.1:+10249474 | None:intergenic |
| ATGGAGAAGGAACGTGAGAG+GGG | 0.642321 | 4.1:+10249487 | None:intergenic |
| TTTGCCTTAAGAAGTTCAAG+TGG | 0.642700 | 4.1:+10248451 | None:intergenic |
| ACACCGTTATGAGGGAGATG+AGG | 0.647772 | 4.1:-10247979 | MS.gene57291:CDS |
| TTCAAACAATTCGATCATCG+TGG | 0.667000 | 4.1:-10248494 | MS.gene57291:CDS |
| TACTTCTGGTGACATCCGCA+AGG | 0.668178 | 4.1:-10248374 | MS.gene57291:intron |
| AGTGGTGACAACTAGAGCTG+AGG | 0.671413 | 4.1:-10247361 | MS.gene57291:CDS |
| GTTTGGGAATGTAATAGACA+AGG | 0.682197 | 4.1:-10247811 | MS.gene57291:intron |
| TGATCAGGATTGTAACAACA+AGG | 0.686508 | 4.1:-10247878 | MS.gene57291:CDS |
| GAAGACAGTGAACAATTGCG+CGG | 0.707759 | 4.1:-10249462 | MS.gene57291:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTAAAATTTTGATATA+TGG | - | chr4.1:10247962-10247981 | MS.gene57291:CDS | 10.0% |
| !!! | ATTAACTTCCTTTTAATTAA+AGG | - | chr4.1:10249108-10249127 | MS.gene57291:intron | 15.0% |
| !!! | TTAACTTCCTTTTAATTAAA+GGG | - | chr4.1:10249109-10249128 | MS.gene57291:intron | 15.0% |
| !! | AAAGGTTAAATACATATAAC+TGG | + | chr4.1:10248632-10248651 | None:intergenic | 20.0% |
| !! | ACAGAAATAAGAATCATAAA+TGG | + | chr4.1:10248966-10248985 | None:intergenic | 20.0% |
| !! | ATATTTCTTGAAGAGAAAAA+TGG | + | chr4.1:10249054-10249073 | None:intergenic | 20.0% |
| !! | CAAGAAATTAGTAAGTTTAA+GGG | + | chr4.1:10248393-10248412 | None:intergenic | 20.0% |
| !! | CTAATATCTTAATTAGATCA+TGG | - | chr4.1:10247426-10247445 | MS.gene57291:CDS | 20.0% |
| !! | CTATAATCCCTTTAATTAAA+AGG | + | chr4.1:10249119-10249138 | None:intergenic | 20.0% |
| !! | CTTCATCAATAATATGATTA+TGG | + | chr4.1:10249086-10249105 | None:intergenic | 20.0% |
| !! | TCAAGAAATTAGTAAGTTTA+AGG | + | chr4.1:10248394-10248413 | None:intergenic | 20.0% |
| !! | TGAAATAAAAGTCAAAGAAA+TGG | + | chr4.1:10247328-10247347 | None:intergenic | 20.0% |
| !!! | ATATTTCTAGTTAATGAATG+TGG | - | chr4.1:10247538-10247557 | MS.gene57291:intron | 20.0% |
| !!! | ATGAATATCTGAAATTATTG+AGG | - | chr4.1:10249255-10249274 | MS.gene57291:intron | 20.0% |
| !!! | TGAATATCTGAAATTATTGA+GGG | - | chr4.1:10249256-10249275 | MS.gene57291:intron | 20.0% |
| !!! | TGTAAATCTTTTCAACTTTA+AGG | - | chr4.1:10248513-10248532 | MS.gene57291:CDS | 20.0% |
| ! | AAAATCTTCCAAAATTTACG+TGG | - | chr4.1:10248490-10248509 | MS.gene57291:CDS | 25.0% |
| ! | AAACAAAATTTCATCAGACA+AGG | + | chr4.1:10248698-10248717 | None:intergenic | 25.0% |
| ! | AACAAAATTTCATCAGACAA+GGG | + | chr4.1:10248697-10248716 | None:intergenic | 25.0% |
| ! | AATCACTATAACAATGAGTT+TGG | - | chr4.1:10248909-10248928 | MS.gene57291:CDS | 25.0% |
| ! | ATCAATAATATGATTATGGC+TGG | + | chr4.1:10249082-10249101 | None:intergenic | 25.0% |
| ! | ATCACTATAACAATGAGTTT+GGG | - | chr4.1:10248910-10248929 | MS.gene57291:CDS | 25.0% |
| ! | GTTAAATACATATAACTGGT+TGG | + | chr4.1:10248628-10248647 | None:intergenic | 25.0% |
| ! | TAAAAGTCAAAGAAATGGAT+CGG | + | chr4.1:10247323-10247342 | None:intergenic | 25.0% |
| ! | TACAAACCCTAGTAAAAAAA+AGG | + | chr4.1:10249183-10249202 | None:intergenic | 25.0% |
| ! | TATATGAATAACCTTGACTA+AGG | - | chr4.1:10248090-10248109 | MS.gene57291:intron | 25.0% |
| ! | TCAACAATTGTTAGTGAAAA+TGG | + | chr4.1:10248036-10248055 | None:intergenic | 25.0% |
| ! | TCAATAATATGATTATGGCT+GGG | + | chr4.1:10249081-10249100 | None:intergenic | 25.0% |
| ! | TCAATTTCTTCTGTAGAAAA+AGG | - | chr4.1:10249153-10249172 | MS.gene57291:intron | 25.0% |
| !! | ATTCTTTTGACATAAATCTG+AGG | + | chr4.1:10248564-10248583 | None:intergenic | 25.0% |
| !! | TTTTTCCTTTGTGTTTTTCA+TGG | - | chr4.1:10247729-10247748 | MS.gene57291:intron | 25.0% |
| !!! | AGGATAACCTTTTTTTTACT+AGG | - | chr4.1:10249173-10249192 | MS.gene57291:intron | 25.0% |
| !!! | CAAGGTATTTTCATGTAATA+AGG | - | chr4.1:10248121-10248140 | MS.gene57291:intron | 25.0% |
| !!! | GGATAACCTTTTTTTTACTA+GGG | - | chr4.1:10249174-10249193 | MS.gene57291:intron | 25.0% |
| AAACAACAATATGAATGGAC+AGG | + | chr4.1:10247775-10247794 | None:intergenic | 30.0% | |
| AATAAGCAGTGCTCAAATAA+GGG | - | chr4.1:10247699-10247718 | MS.gene57291:intron | 30.0% | |
| ACAAAATTTCATCAGACAAG+GGG | + | chr4.1:10248696-10248715 | None:intergenic | 30.0% | |
| AGTTCCTCAAAATATTTCTC+AGG | + | chr4.1:10249305-10249324 | None:intergenic | 30.0% | |
| GCATAAGCATAAACATGAAA+AGG | + | chr4.1:10248650-10248669 | None:intergenic | 30.0% | |
| GGCATTCTTCTACTAAATAA+AGG | + | chr4.1:10248543-10248562 | None:intergenic | 30.0% | |
| GTTCCTCAAAATATTTCTCA+GGG | + | chr4.1:10249304-10249323 | None:intergenic | 30.0% | |
| TTTAAGAAGATCTTCTCCAT+GGG | + | chr4.1:10247907-10247926 | None:intergenic | 30.0% | |
| ! | GATTTACACCACGTAAATTT+TGG | + | chr4.1:10248501-10248520 | None:intergenic | 30.0% |
| ! | TAGACAAGGTATGAATGTTT+TGG | - | chr4.1:10248940-10248959 | MS.gene57291:intron | 30.0% |
| ! | TGATTCTTCTCAAAAGCTTT+TGG | - | chr4.1:10248719-10248738 | MS.gene57291:intron | 30.0% |
| !! | AATATTTTGAGGAACTCCTT+AGG | - | chr4.1:10249309-10249328 | MS.gene57291:intron | 30.0% |
| !! | AGAACTTTCAAGTGATTTTG+AGG | - | chr4.1:10247938-10247957 | MS.gene57291:CDS | 30.0% |
| !! | GTCCATTCATATTGTTGTTT+CGG | - | chr4.1:10247775-10247794 | MS.gene57291:intron | 30.0% |
| !! | GTGACATATTTTTACAGGAT+GGG | - | chr4.1:10247797-10247816 | MS.gene57291:intron | 30.0% |
| !! | TGACATATTTTTACAGGATG+GGG | - | chr4.1:10247798-10247817 | MS.gene57291:intron | 30.0% |
| !! | TTTCGGTGACATATTTTTAC+AGG | - | chr4.1:10247792-10247811 | MS.gene57291:intron | 30.0% |
| !!! | CAACATTTTAGTTGCTTGAT+TGG | + | chr4.1:10248221-10248240 | None:intergenic | 30.0% |
| !!! | TCTAGTAAGAGCATTTTCAT+CGG | + | chr4.1:10249357-10249376 | None:intergenic | 30.0% |
| AAAAACGTCAGATCAAGACA+TGG | + | chr4.1:10248672-10248691 | None:intergenic | 35.0% | |
| AAAAATACACCCATCTTGGT+GGG | - | chr4.1:10248595-10248614 | MS.gene57291:intron | 35.0% | |
| AAGTGTCTTTGTCAATTGCA+CGG | + | chr4.1:10249457-10249476 | None:intergenic | 35.0% | |
| AAGTTTAAGGGTTTACCTTG+CGG | + | chr4.1:10248381-10248400 | None:intergenic | 35.0% | |
| AATTGTTCACTGTCTTCTGA+TGG | + | chr4.1:10247272-10247291 | None:intergenic | 35.0% | |
| ATAGGCAACATCTTCTTCAA+GGG | + | chr4.1:10248341-10248360 | None:intergenic | 35.0% | |
| ATCTCCACTTGAACTTCTTA+AGG | - | chr4.1:10248282-10248301 | MS.gene57291:intron | 35.0% | |
| ATTATTGAGGGCAGCAATTA+AGG | - | chr4.1:10249268-10249287 | MS.gene57291:intron | 35.0% | |
| ATTGCTTCATGAGAAGATTG+CGG | - | chr4.1:10248812-10248831 | MS.gene57291:CDS | 35.0% | |
| CAAAATTTCATCAGACAAGG+GGG | + | chr4.1:10248695-10248714 | None:intergenic | 35.0% | |
| CACCGAAACAACAATATGAA+TGG | + | chr4.1:10247780-10247799 | None:intergenic | 35.0% | |
| CTCAAAATATTTCTCAGGGT+AGG | + | chr4.1:10249300-10249319 | None:intergenic | 35.0% | |
| GAATAAGCAGTGCTCAAATA+AGG | - | chr4.1:10247698-10247717 | MS.gene57291:intron | 35.0% | |
| GATTCATCGTGATCATGATT+TGG | + | chr4.1:10247635-10247654 | None:intergenic | 35.0% | |
| GTTTGGGAATGTAATAGACA+AGG | - | chr4.1:10248926-10248945 | MS.gene57291:CDS | 35.0% | |
| TCATGCCATGAAAAACACAA+AGG | + | chr4.1:10247737-10247756 | None:intergenic | 35.0% | |
| TGAAAATGCTCTTACTAGAG+TGG | - | chr4.1:10249358-10249377 | MS.gene57291:intron | 35.0% | |
| TGATCAGGATTGTAACAACA+AGG | - | chr4.1:10248859-10248878 | MS.gene57291:CDS | 35.0% | |
| TTATTGAGGGCAGCAATTAA+GGG | - | chr4.1:10249269-10249288 | MS.gene57291:intron | 35.0% | |
| TTCAAACAATTCGATCATCG+TGG | - | chr4.1:10248243-10248262 | MS.gene57291:intron | 35.0% | |
| TTCCAAAAATACACCCATCT+TGG | - | chr4.1:10248591-10248610 | MS.gene57291:intron | 35.0% | |
| TTGACATGAAACCTTAGTCA+AGG | + | chr4.1:10248104-10248123 | None:intergenic | 35.0% | |
| TTGACTAAGGTTTCATGTCA+AGG | - | chr4.1:10248103-10248122 | MS.gene57291:intron | 35.0% | |
| TTTGCCTTAAGAAGTTCAAG+TGG | + | chr4.1:10248289-10248308 | None:intergenic | 35.0% | |
| TTTGGACTACATGAAGAGAT+CGG | + | chr4.1:10247617-10247636 | None:intergenic | 35.0% | |
| ! | AAAATTCTCCTTGCACTGAT+GGG | - | chr4.1:10249491-10249510 | MS.gene57291:CDS | 35.0% |
| ! | CTACCCTGAGAAATATTTTG+AGG | - | chr4.1:10249298-10249317 | MS.gene57291:intron | 35.0% |
| ! | CTTTAAGAAGATCTTCTCCA+TGG | + | chr4.1:10247908-10247927 | None:intergenic | 35.0% |
| ! | TTGTTGTTACAATCCTGATC+AGG | + | chr4.1:10248860-10248879 | None:intergenic | 35.0% |
| !! | CTTCAAGGGACTTTTTGAAA+CGG | + | chr4.1:10248327-10248346 | None:intergenic | 35.0% |
| !! | GGTGACATATTTTTACAGGA+TGG | - | chr4.1:10247796-10247815 | MS.gene57291:intron | 35.0% |
| AAGTTCAAGTGGAGATCTTG+TGG | + | chr4.1:10248278-10248297 | None:intergenic | 40.0% | |
| ACAATCATGATGACCTGATC+AGG | - | chr4.1:10248844-10248863 | MS.gene57291:CDS | 40.0% | |
| ACACTCCTATGTTACGTGTT+TGG | - | chr4.1:10247472-10247491 | MS.gene57291:CDS | 40.0% | |
| ACCAACCAAACACGTAACAT+AGG | + | chr4.1:10247480-10247499 | None:intergenic | 40.0% | |
| AGATGAGGTGAACATGACAT+TGG | - | chr4.1:10248773-10248792 | MS.gene57291:intron | 40.0% | |
| AGTCAAAGAAATGGATCGGT+AGG | + | chr4.1:10247319-10247338 | None:intergenic | 40.0% | |
| CAAAAATACACCCATCTTGG+TGG | - | chr4.1:10248594-10248613 | MS.gene57291:intron | 40.0% | |
| GAAAATTCTCCTTGCACTGA+TGG | - | chr4.1:10249490-10249509 | MS.gene57291:CDS | 40.0% | |
| GATAGGCAACATCTTCTTCA+AGG | + | chr4.1:10248342-10248361 | None:intergenic | 40.0% | |
| GATGTTGCCTATCATACTTC+TGG | - | chr4.1:10248349-10248368 | MS.gene57291:intron | 40.0% | |
| GCAATTGACAAAGACACTTC+TGG | - | chr4.1:10249458-10249477 | MS.gene57291:CDS | 40.0% | |
| GCAGGATTTGGAAACTGATT+CGG | - | chr4.1:10249229-10249248 | MS.gene57291:intron | 40.0% | |
| TCATGAGAAGATTGCGGATA+AGG | - | chr4.1:10248818-10248837 | MS.gene57291:CDS | 40.0% | |
| TCCTATGTTACGTGTTTGGT+TGG | - | chr4.1:10247476-10247495 | MS.gene57291:CDS | 40.0% | |
| ! | AGGCTGGCTATAAACAAGAT+GGG | - | chr4.1:10249329-10249348 | MS.gene57291:intron | 40.0% |
| ! | AGGCTTGATAATATCGATCC+TGG | - | chr4.1:10247830-10247849 | MS.gene57291:CDS | 40.0% |
| ! | ATTAGATCTGCCCTTTTGCT+GGG | + | chr4.1:10249000-10249019 | None:intergenic | 40.0% |
| ! | CACCAAGATGGGTGTATTTT+TGG | + | chr4.1:10248596-10248615 | None:intergenic | 40.0% |
| ! | GATGTCACCAGAAGTATGAT+AGG | + | chr4.1:10248359-10248378 | None:intergenic | 40.0% |
| ! | TAGGCTGGCTATAAACAAGA+TGG | - | chr4.1:10249328-10249347 | MS.gene57291:intron | 40.0% |
| ! | TATTAGATCTGCCCTTTTGC+TGG | + | chr4.1:10249001-10249020 | None:intergenic | 40.0% |
| ! | TCTTGTTTATAGCCAGCCTA+AGG | + | chr4.1:10249328-10249347 | None:intergenic | 40.0% |
| !!! | AAAGCTTTTGGTTCCTCTTG+TGG | - | chr4.1:10248731-10248750 | MS.gene57291:intron | 40.0% |
| !!! | AAGCTTTTGGTTCCTCTTGT+GGG | - | chr4.1:10248732-10248751 | MS.gene57291:intron | 40.0% |
| GAAGACAGTGAACAATTGCG+CGG | - | chr4.1:10247275-10247294 | MS.gene57291:CDS | 45.0% | |
| GAGAAGAAACAGTGTTCCTC+TGG | - | chr4.1:10249430-10249449 | MS.gene57291:intron | 45.0% | |
| GGCTAAAAATGCATCACGCT+CGG | + | chr4.1:10248200-10248219 | None:intergenic | 45.0% | |
| TCACCTCATCTCCCTCATAA+CGG | + | chr4.1:10248764-10248783 | None:intergenic | 45.0% | |
| TCACTGTCTTCTGATGGAGA+AGG | + | chr4.1:10247266-10247285 | None:intergenic | 45.0% | |
| TCGAACTAACGTTGAGCTTC+TGG | - | chr4.1:10249204-10249223 | MS.gene57291:intron | 45.0% | |
| TTGCAACACTCCCAGCAAAA+GGG | - | chr4.1:10248987-10249006 | MS.gene57291:intron | 45.0% | |
| ! | GAGGAACACTGTTTCTTCTC+TGG | + | chr4.1:10249430-10249449 | None:intergenic | 45.0% |
| !! | GGTTGATTTGCAGCGAATTG+CGG | - | chr4.1:10249397-10249416 | MS.gene57291:intron | 45.0% |
| !! | TTTTGAGGAACTCCTTAGGC+TGG | - | chr4.1:10249313-10249332 | MS.gene57291:intron | 45.0% |
| !!! | ATTTTTATTATTATTACTTT+TGG | - | chr4.1:10247390-10247409 | MS.gene57291:CDS | 5.0% |
| AAAAATGCATCACGCTCGGC+CGG | + | chr4.1:10248196-10248215 | None:intergenic | 50.0% | |
| AATACACCCATCTTGGTGGG+TGG | - | chr4.1:10248598-10248617 | MS.gene57291:intron | 50.0% | |
| ACACCGTTATGAGGGAGATG+AGG | - | chr4.1:10248758-10248777 | MS.gene57291:intron | 50.0% | |
| ACAGGATGGGGAACGAATGA+AGG | - | chr4.1:10247810-10247829 | MS.gene57291:intron | 50.0% | |
| AGTGGTGACAACTAGAGCTG+AGG | - | chr4.1:10249376-10249395 | MS.gene57291:intron | 50.0% | |
| ATGGAGAAGGAACGTGAGAG+GGG | + | chr4.1:10247253-10247272 | None:intergenic | 50.0% | |
| CATCATGTCCCATCAGTGCA+AGG | + | chr4.1:10249502-10249521 | None:intergenic | 50.0% | |
| GAAACTTACACGCAGACCCA+TGG | - | chr4.1:10247888-10247907 | MS.gene57291:CDS | 50.0% | |
| GAGCTGCATTTCTATGAGCC+AGG | + | chr4.1:10247851-10247870 | None:intergenic | 50.0% | |
| GATGGAGAAGGAACGTGAGA+GGG | + | chr4.1:10247254-10247273 | None:intergenic | 50.0% | |
| GTGGGCATACACCGTTATGA+GGG | - | chr4.1:10248750-10248769 | MS.gene57291:intron | 50.0% | |
| GTTGCAACACTCCCAGCAAA+AGG | - | chr4.1:10248986-10249005 | MS.gene57291:intron | 50.0% | |
| TAACGGTGTATGCCCACAAG+AGG | + | chr4.1:10248747-10248766 | None:intergenic | 50.0% | |
| TACTTCTGGTGACATCCGCA+AGG | - | chr4.1:10248363-10248382 | MS.gene57291:intron | 50.0% | |
| TGATGGAGAAGGAACGTGAG+AGG | + | chr4.1:10247255-10247274 | None:intergenic | 50.0% | |
| TGTGGGCATACACCGTTATG+AGG | - | chr4.1:10248749-10248768 | MS.gene57291:intron | 50.0% | |
| TTGTCAATTGCACGGTCCAG+AGG | + | chr4.1:10249449-10249468 | None:intergenic | 50.0% | |
| ! | AACAGAAAGCTGTGCTGCTG+TGG | - | chr4.1:10248161-10248180 | MS.gene57291:intron | 50.0% |
| ! | CAATTGCGCGGTGCTTTTCA+AGG | - | chr4.1:10247287-10247306 | MS.gene57291:CDS | 50.0% |
| ! | TGATTTGCAGCGAATTGCGG+AGG | - | chr4.1:10249400-10249419 | MS.gene57291:intron | 50.0% |
| GCTGCTGTGGACATTGGATC+CGG | - | chr4.1:10248174-10248193 | MS.gene57291:intron | 55.0% | |
| GGCTATCCACCCACCAAGAT+GGG | + | chr4.1:10248607-10248626 | None:intergenic | 55.0% | |
| GGGTCTGCGTGTAAGTTTCG+CGG | + | chr4.1:10247887-10247906 | None:intergenic | 55.0% | |
| TGGCTATCCACCCACCAAGA+TGG | + | chr4.1:10248608-10248627 | None:intergenic | 55.0% | |
| ! | AACGTTGAGCTTCTGGCTGC+AGG | - | chr4.1:10249211-10249230 | MS.gene57291:intron | 55.0% |
| ! | AGCTGTGCTGCTGTGGACAT+TGG | - | chr4.1:10248168-10248187 | MS.gene57291:intron | 55.0% |
| ! | GAGCTTCTGGCTGCAGGATT+TGG | - | chr4.1:10249217-10249236 | MS.gene57291:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 10247233 | 10249526 | 10247233 | ID=MS.gene57291 |
| chr4.1 | mRNA | 10247233 | 10249526 | 10247233 | ID=MS.gene57291.t1;Parent=MS.gene57291 |
| chr4.1 | exon | 10249451 | 10249526 | 10249451 | ID=MS.gene57291.t1.exon1;Parent=MS.gene57291.t1 |
| chr4.1 | CDS | 10249451 | 10249526 | 10249451 | ID=cds.MS.gene57291.t1;Parent=MS.gene57291.t1 |
| chr4.1 | exon | 10248800 | 10248945 | 10248800 | ID=MS.gene57291.t1.exon2;Parent=MS.gene57291.t1 |
| chr4.1 | CDS | 10248800 | 10248945 | 10248800 | ID=cds.MS.gene57291.t1;Parent=MS.gene57291.t1 |
| chr4.1 | exon | 10248375 | 10248593 | 10248375 | ID=MS.gene57291.t1.exon3;Parent=MS.gene57291.t1 |
| chr4.1 | CDS | 10248375 | 10248593 | 10248375 | ID=cds.MS.gene57291.t1;Parent=MS.gene57291.t1 |
| chr4.1 | exon | 10247812 | 10248024 | 10247812 | ID=MS.gene57291.t1.exon4;Parent=MS.gene57291.t1 |
| chr4.1 | CDS | 10247812 | 10248024 | 10247812 | ID=cds.MS.gene57291.t1;Parent=MS.gene57291.t1 |
| chr4.1 | exon | 10247233 | 10247526 | 10247233 | ID=MS.gene57291.t1.exon5;Parent=MS.gene57291.t1 |
| chr4.1 | CDS | 10247233 | 10247526 | 10247233 | ID=cds.MS.gene57291.t1;Parent=MS.gene57291.t1 |
| Gene Sequence |
| Protein sequence |
