Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061777.t1 | QFP98439.1 | 100 | 315 | 0 | 0 | 1 | 315 | 1 | 315 | 2.30E-172 | 614.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061777.t1 | Q9XEE2 | 71.2 | 316 | 90 | 1 | 1 | 315 | 1 | 316 | 5.6e-127 | 455.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061777.t1 | Q42922 | 100.0 | 308 | 0 | 0 | 8 | 315 | 1 | 308 | 1.9e-168 | 601.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene061777 | -0.860584 | 1.87E-63 | -1.69E-46 |
| MS.gene04921 | MS.gene061777 | 0.842226 | 2.94E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene061777 | -0.826383 | 2.80E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene061777 | -0.810924 | 9.05E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene061777 | -0.830728 | 2.49E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene061777 | -0.836976 | 6.82E-57 | -1.69E-46 |
| MS.gene04932 | MS.gene061777 | 0.817527 | 3.15E-52 | -1.69E-46 |
| MS.gene049549 | MS.gene061777 | 0.803504 | 3.38E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene061777 | 0.823207 | 1.57E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene061777 | -0.85084 | 1.31E-60 | -1.69E-46 |
| MS.gene049790 | MS.gene061777 | 0.81304 | 3.13E-51 | -1.69E-46 |
| MS.gene050082 | MS.gene061777 | 0.846262 | 2.43E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene061777 | -0.815619 | 8.42E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene061777 | -0.830658 | 2.59E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene061777 | -0.867032 | 1.85E-65 | -1.69E-46 |
| MS.gene050323 | MS.gene061777 | -0.867252 | 1.57E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene061777 | -0.81706 | 4.01E-52 | -1.69E-46 |
| MS.gene050338 | MS.gene061777 | 0.872112 | 4.08E-67 | -1.69E-46 |
| MS.gene050444 | MS.gene061777 | -0.844786 | 6.09E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene061777 | -0.868828 | 4.88E-66 | -1.69E-46 |
| MS.gene050504 | MS.gene061777 | -0.854129 | 1.51E-61 | -1.69E-46 |
| MS.gene050577 | MS.gene061777 | -0.862234 | 5.85E-64 | -1.69E-46 |
| MS.gene050612 | MS.gene061777 | -0.86205 | 6.67E-64 | -1.69E-46 |
| MS.gene050675 | MS.gene061777 | -0.844613 | 6.78E-59 | -1.69E-46 |
| MS.gene050697 | MS.gene061777 | -0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene061777 | -0.82637 | 2.82E-54 | -1.69E-46 |
| MS.gene050809 | MS.gene061777 | 0.803448 | 3.47E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene061777 | -0.827774 | 1.30E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene061777 | -0.852974 | 3.25E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene061777 | -0.851261 | 9.96E-61 | -1.69E-46 |
| MS.gene050904 | MS.gene061777 | -0.841313 | 5.12E-58 | -1.69E-46 |
| MS.gene050986 | MS.gene061777 | -0.82382 | 1.13E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene061777 | 0.846975 | 1.55E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene061777 | 0.851949 | 6.36E-61 | -1.69E-46 |
| MS.gene051127 | MS.gene061777 | 0.810166 | 1.32E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene061777 | 0.801812 | 7.55E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene061777 | 0.878996 | 1.79E-69 | -1.69E-46 |
| MS.gene051268 | MS.gene061777 | -0.818321 | 2.08E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene061777 | -0.83256 | 8.82E-56 | -1.69E-46 |
| MS.gene051364 | MS.gene061777 | 0.815534 | 8.80E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene061777 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene051422 | MS.gene061777 | 0.861493 | 9.87E-64 | -1.69E-46 |
| MS.gene051439 | MS.gene061777 | 0.808916 | 2.45E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene061777 | 0.818042 | 2.41E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene061777 | 0.817849 | 2.66E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene061777 | 0.891906 | 2.59E-74 | -1.69E-46 |
| MS.gene051863 | MS.gene061777 | 0.819878 | 9.21E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene061777 | -0.813692 | 2.25E-51 | -1.69E-46 |
| MS.gene051973 | MS.gene061777 | 0.814061 | 1.87E-51 | -1.69E-46 |
| MS.gene052129 | MS.gene061777 | 0.848647 | 5.37E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene061777 | -0.835541 | 1.58E-56 | -1.69E-46 |
| MS.gene052383 | MS.gene061777 | 0.801679 | 8.04E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene061777 | 0.813934 | 1.99E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene061777 | -0.818538 | 1.86E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene061777 | -0.825323 | 4.99E-54 | -1.69E-46 |
| MS.gene052494 | MS.gene061777 | 0.845064 | 5.13E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene061777 | -0.820995 | 5.11E-53 | -1.69E-46 |
| MS.gene052606 | MS.gene061777 | 0.844783 | 6.10E-59 | -1.69E-46 |
| MS.gene052702 | MS.gene061777 | 0.826851 | 2.16E-54 | -1.69E-46 |
| MS.gene052710 | MS.gene061777 | 0.814463 | 1.52E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene061777 | -0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene061777 | -0.829842 | 4.10E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene061777 | -0.821237 | 4.49E-53 | -1.69E-46 |
| MS.gene053097 | MS.gene061777 | 0.834306 | 3.24E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene061777 | -0.828807 | 7.32E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene061777 | 0.83523 | 1.89E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene061777 | -0.821504 | 3.90E-53 | -1.69E-46 |
| MS.gene053568 | MS.gene061777 | 0.824465 | 7.95E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene061777 | -0.823141 | 1.62E-53 | -1.69E-46 |
| MS.gene053887 | MS.gene061777 | 0.825444 | 4.67E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene061777 | -0.811387 | 7.18E-51 | -1.69E-46 |
| MS.gene054181 | MS.gene061777 | 0.80128 | 9.70E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene061777 | -0.819277 | 1.26E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene061777 | -0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene054642 | MS.gene061777 | -0.8111 | 8.29E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene061777 | 0.845457 | 4.01E-59 | -1.69E-46 |
| MS.gene054707 | MS.gene061777 | 0.802511 | 5.42E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene061777 | -0.877261 | 7.24E-69 | -1.69E-46 |
| MS.gene05483 | MS.gene061777 | 0.801674 | 8.06E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene061777 | 0.818099 | 2.34E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene061777 | -0.85214 | 5.61E-61 | -1.69E-46 |
| MS.gene055154 | MS.gene061777 | 0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene055158 | MS.gene061777 | 0.828035 | 1.12E-54 | -1.69E-46 |
| MS.gene055251 | MS.gene061777 | 0.886248 | 4.04E-72 | -1.69E-46 |
| MS.gene055362 | MS.gene061777 | -0.834147 | 3.55E-56 | -1.69E-46 |
| MS.gene055388 | MS.gene061777 | 0.804451 | 2.15E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene061777 | -0.857895 | 1.20E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene061777 | -0.838664 | 2.51E-57 | -1.69E-46 |
| MS.gene055729 | MS.gene061777 | 0.824955 | 6.10E-54 | -1.69E-46 |
| MS.gene055730 | MS.gene061777 | 0.83355 | 5.00E-56 | -1.69E-46 |
| MS.gene055731 | MS.gene061777 | 0.826797 | 2.23E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene061777 | -0.865166 | 7.19E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene061777 | -0.85406 | 1.58E-61 | -1.69E-46 |
| MS.gene055751 | MS.gene061777 | -0.873454 | 1.45E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene061777 | -0.826604 | 2.48E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene061777 | -0.886433 | 3.43E-72 | -1.69E-46 |
| MS.gene05590 | MS.gene061777 | 0.808247 | 3.40E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene061777 | 0.873072 | 1.95E-67 | -1.69E-46 |
| MS.gene055977 | MS.gene061777 | 0.804238 | 2.38E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene061777 | 0.854097 | 1.54E-61 | -1.69E-46 |
| MS.gene056200 | MS.gene061777 | 0.812544 | 4.02E-51 | -1.69E-46 |
| MS.gene056224 | MS.gene061777 | 0.825222 | 5.27E-54 | -1.69E-46 |
| MS.gene056266 | MS.gene061777 | -0.844437 | 7.57E-59 | -1.69E-46 |
| MS.gene056354 | MS.gene061777 | 0.835719 | 1.42E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene061777 | -0.843986 | 1.00E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene061777 | -0.879935 | 8.30E-70 | -1.69E-46 |
| MS.gene056510 | MS.gene061777 | -0.821846 | 3.25E-53 | -1.69E-46 |
| MS.gene056590 | MS.gene061777 | 0.831583 | 1.54E-55 | -1.69E-46 |
| MS.gene056591 | MS.gene061777 | 0.832589 | 8.67E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene061777 | -0.832152 | 1.11E-55 | -1.69E-46 |
| MS.gene056688 | MS.gene061777 | 0.81735 | 3.45E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene061777 | -0.829822 | 4.15E-55 | -1.69E-46 |
| MS.gene056694 | MS.gene061777 | 0.867876 | 9.90E-66 | -1.69E-46 |
| MS.gene056697 | MS.gene061777 | 0.871496 | 6.54E-67 | -1.69E-46 |
| MS.gene056748 | MS.gene061777 | 0.811873 | 5.63E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene061777 | 0.88155 | 2.19E-70 | -1.69E-46 |
| MS.gene056857 | MS.gene061777 | 0.830331 | 3.12E-55 | -1.69E-46 |
| MS.gene056988 | MS.gene061777 | 0.804521 | 2.08E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene061777 | -0.802112 | 6.55E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene061777 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene061777 | 0.800622 | 1.32E-48 | -1.69E-46 |
| MS.gene057548 | MS.gene061777 | 0.824616 | 7.33E-54 | -1.69E-46 |
| MS.gene057549 | MS.gene061777 | 0.848903 | 4.56E-60 | -1.69E-46 |
| MS.gene057606 | MS.gene061777 | 0.807347 | 5.28E-50 | -1.69E-46 |
| MS.gene057717 | MS.gene061777 | 0.838729 | 2.42E-57 | -1.69E-46 |
| MS.gene057768 | MS.gene061777 | 0.857577 | 1.49E-62 | -1.69E-46 |
| MS.gene057831 | MS.gene061777 | -0.811117 | 8.22E-51 | -1.69E-46 |
| MS.gene058067 | MS.gene061777 | 0.817934 | 2.55E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene061777 | 0.876731 | 1.11E-68 | -1.69E-46 |
| MS.gene058099 | MS.gene061777 | 0.837431 | 5.22E-57 | -1.69E-46 |
| MS.gene058111 | MS.gene061777 | 0.813854 | 2.07E-51 | -1.69E-46 |
| MS.gene058117 | MS.gene061777 | 0.816457 | 5.48E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene061777 | -0.808646 | 2.80E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene061777 | 0.826375 | 2.81E-54 | -1.69E-46 |
| MS.gene058173 | MS.gene061777 | 0.811505 | 6.77E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene061777 | 0.829404 | 5.25E-55 | -1.69E-46 |
| MS.gene058268 | MS.gene061777 | 0.852283 | 5.11E-61 | -1.69E-46 |
| MS.gene058269 | MS.gene061777 | 0.849321 | 3.49E-60 | -1.69E-46 |
| MS.gene058334 | MS.gene061777 | 0.888945 | 3.76E-73 | -1.69E-46 |
| MS.gene05837 | MS.gene061777 | -0.826154 | 3.17E-54 | -1.69E-46 |
| MS.gene058382 | MS.gene061777 | 0.88486 | 1.34E-71 | -1.69E-46 |
| MS.gene058419 | MS.gene061777 | -0.843771 | 1.14E-58 | -1.69E-46 |
| MS.gene058452 | MS.gene061777 | 0.833388 | 5.49E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene061777 | -0.826329 | 2.88E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene061777 | 0.844656 | 6.61E-59 | -1.69E-46 |
| MS.gene058677 | MS.gene061777 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene058838 | MS.gene061777 | -0.852264 | 5.17E-61 | -1.69E-46 |
| MS.gene059022 | MS.gene061777 | -0.847594 | 1.05E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene061777 | -0.837072 | 6.45E-57 | -1.69E-46 |
| MS.gene059045 | MS.gene061777 | 0.814274 | 1.67E-51 | -1.69E-46 |
| MS.gene059069 | MS.gene061777 | 0.800283 | 1.55E-48 | -1.69E-46 |
| MS.gene059070 | MS.gene061777 | 0.806767 | 7.01E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene061777 | -0.80006 | 1.72E-48 | -1.69E-46 |
| MS.gene05926 | MS.gene061777 | 0.871839 | 5.03E-67 | -1.69E-46 |
| MS.gene059315 | MS.gene061777 | 0.821915 | 3.13E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene061777 | 0.802392 | 5.73E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene061777 | -0.812194 | 4.79E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene061777 | -0.846749 | 1.79E-59 | -1.69E-46 |
| MS.gene059685 | MS.gene061777 | 0.809068 | 2.27E-50 | -1.69E-46 |
| MS.gene059699 | MS.gene061777 | 0.835142 | 1.99E-56 | -1.69E-46 |
| MS.gene059701 | MS.gene061777 | 0.834167 | 3.50E-56 | -1.69E-46 |
| MS.gene059703 | MS.gene061777 | 0.8538 | 1.88E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene061777 | -0.810902 | 9.15E-51 | -1.69E-46 |
| MS.gene059756 | MS.gene061777 | -0.801932 | 7.13E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene061777 | -0.874011 | 9.42E-68 | -1.69E-46 |
| MS.gene059953 | MS.gene061777 | 0.823186 | 1.59E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene061777 | 0.822031 | 2.94E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene061777 | -0.855264 | 7.09E-62 | -1.69E-46 |
| MS.gene060076 | MS.gene061777 | 0.842593 | 2.35E-58 | -1.69E-46 |
| MS.gene06027 | MS.gene061777 | -0.818967 | 1.49E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene061777 | 0.870705 | 1.19E-66 | -1.69E-46 |
| MS.gene06042 | MS.gene061777 | 0.839947 | 1.17E-57 | -1.69E-46 |
| MS.gene060561 | MS.gene061777 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene061777 | 0.843935 | 1.03E-58 | -1.69E-46 |
| MS.gene060595 | MS.gene061777 | 0.823792 | 1.14E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene061777 | -0.825197 | 5.34E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene061777 | -0.858477 | 8.02E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene061777 | -0.852743 | 3.78E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene061777 | -0.843918 | 1.04E-58 | -1.69E-46 |
| MS.gene060823 | MS.gene061777 | 0.84078 | 7.08E-58 | -1.69E-46 |
| MS.gene06084 | MS.gene061777 | 0.840761 | 7.16E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene061777 | -0.877224 | 7.46E-69 | -1.69E-46 |
| MS.gene061044 | MS.gene061777 | 0.919934 | 2.42E-87 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061777.t1 | MTR_0276s0050 | 97.460 | 315 | 8 | 0 | 1 | 315 | 1 | 315 | 0.0 | 625 |
| MS.gene061777.t1 | MTR_5g063670 | 66.349 | 315 | 106 | 0 | 1 | 315 | 1 | 315 | 3.63e-155 | 437 |
| MS.gene061777.t1 | MTR_8g038210 | 51.429 | 315 | 151 | 2 | 1 | 315 | 1 | 313 | 6.48e-105 | 309 |
| MS.gene061777.t1 | MTR_3g018790 | 50.476 | 315 | 155 | 1 | 1 | 315 | 1 | 314 | 1.46e-103 | 306 |
| MS.gene061777.t1 | MTR_8g038220 | 50.962 | 312 | 152 | 1 | 1 | 312 | 1 | 311 | 1.80e-103 | 305 |
| MS.gene061777.t1 | MTR_3g018780 | 49.524 | 315 | 157 | 2 | 1 | 314 | 1 | 314 | 1.27e-102 | 303 |
| MS.gene061777.t1 | MTR_8g038220 | 51.118 | 313 | 149 | 2 | 1 | 312 | 1 | 310 | 1.81e-102 | 303 |
| MS.gene061777.t1 | MTR_8g038180 | 50.641 | 312 | 153 | 1 | 1 | 312 | 1 | 311 | 1.86e-100 | 298 |
| MS.gene061777.t1 | MTR_8g038210 | 49.524 | 315 | 157 | 2 | 1 | 315 | 1 | 313 | 9.53e-100 | 296 |
| MS.gene061777.t1 | MTR_2g031980 | 43.234 | 303 | 172 | 0 | 12 | 314 | 11 | 313 | 2.15e-89 | 270 |
| MS.gene061777.t1 | MTR_8g038150 | 42.857 | 315 | 177 | 1 | 1 | 312 | 1 | 315 | 5.41e-82 | 251 |
| MS.gene061777.t1 | MTR_3g018790 | 49.587 | 242 | 122 | 0 | 74 | 315 | 19 | 260 | 3.92e-75 | 231 |
| MS.gene061777.t1 | MTR_8g107640 | 37.855 | 317 | 193 | 3 | 1 | 315 | 1 | 315 | 1.86e-72 | 226 |
| MS.gene061777.t1 | MTR_1g033560 | 36.076 | 316 | 198 | 3 | 1 | 314 | 1 | 314 | 1.62e-66 | 211 |
| MS.gene061777.t1 | MTR_6g071605 | 35.783 | 313 | 199 | 2 | 1 | 312 | 1 | 312 | 3.02e-65 | 208 |
| MS.gene061777.t1 | MTR_6g071615 | 37.580 | 314 | 192 | 3 | 1 | 312 | 1 | 312 | 1.41e-64 | 206 |
| MS.gene061777.t1 | MTR_1g112520 | 36.624 | 314 | 195 | 3 | 1 | 312 | 1 | 312 | 2.30e-62 | 201 |
| MS.gene061777.t1 | MTR_6g071595 | 36.943 | 314 | 194 | 3 | 1 | 312 | 1 | 312 | 4.14e-56 | 184 |
| MS.gene061777.t1 | MTR_3g018920 | 44.811 | 212 | 84 | 2 | 1 | 212 | 1 | 179 | 1.58e-53 | 173 |
| MS.gene061777.t1 | MTR_8g038170 | 36.792 | 318 | 172 | 8 | 14 | 312 | 4 | 311 | 4.59e-50 | 169 |
| MS.gene061777.t1 | MTR_8g038170 | 36.792 | 318 | 172 | 8 | 14 | 312 | 4 | 311 | 4.59e-50 | 169 |
| MS.gene061777.t1 | MTR_6g071595 | 35.317 | 252 | 159 | 3 | 1 | 250 | 1 | 250 | 2.45e-38 | 137 |
| MS.gene061777.t1 | MTR_6g028030 | 26.277 | 274 | 194 | 5 | 45 | 310 | 34 | 307 | 6.37e-23 | 97.1 |
| MS.gene061777.t1 | MTR_3g018925 | 47.917 | 96 | 50 | 0 | 220 | 315 | 14 | 109 | 3.54e-22 | 89.7 |
| MS.gene061777.t1 | MTR_8g038090 | 43.478 | 69 | 38 | 1 | 245 | 312 | 22 | 90 | 3.01e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061777.t1 | AT5G65020 | 71.656 | 314 | 88 | 1 | 1 | 313 | 1 | 314 | 4.23e-170 | 474 |
| MS.gene061777.t1 | AT5G10230 | 71.019 | 314 | 91 | 0 | 1 | 314 | 1 | 314 | 1.80e-167 | 468 |
| MS.gene061777.t1 | AT5G10220 | 69.304 | 316 | 95 | 1 | 1 | 314 | 1 | 316 | 2.95e-162 | 455 |
| MS.gene061777.t1 | AT5G65020 | 72.664 | 289 | 78 | 1 | 26 | 313 | 11 | 299 | 2.49e-157 | 442 |
| MS.gene061777.t1 | AT1G35720 | 66.772 | 316 | 104 | 1 | 1 | 315 | 1 | 316 | 8.21e-155 | 436 |
| MS.gene061777.t1 | AT5G12380 | 51.118 | 313 | 152 | 1 | 1 | 313 | 1 | 312 | 1.38e-110 | 323 |
| MS.gene061777.t1 | AT2G38760 | 42.138 | 318 | 178 | 2 | 1 | 312 | 1 | 318 | 1.58e-82 | 252 |
| MS.gene061777.t1 | AT1G68090 | 37.380 | 313 | 195 | 1 | 1 | 312 | 1 | 313 | 8.17e-64 | 204 |
| MS.gene061777.t1 | AT1G68090 | 37.349 | 249 | 151 | 3 | 1 | 244 | 1 | 249 | 2.02e-43 | 149 |
| MS.gene061777.t1 | AT2G38750 | 35.526 | 304 | 171 | 6 | 26 | 311 | 2 | 298 | 2.79e-43 | 150 |
| MS.gene061777.t1 | AT2G38750 | 35.505 | 307 | 173 | 6 | 23 | 311 | 16 | 315 | 3.97e-43 | 151 |
Find 62 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGAGGGCAGCAATTA+AGG | 0.189714 | 4.3:-10111552 | MS.gene061777:CDS |
| AATCACTATAACAATGAGTT+TGG | 0.243154 | 4.3:-10111911 | MS.gene061777:CDS |
| ATCTCCACTTGAACTTCTTA+AGG | 0.350377 | 4.3:-10112538 | MS.gene061777:CDS |
| TCATGAGAAGATTGCGGATA+AGG | 0.357945 | 4.3:-10112002 | MS.gene061777:CDS |
| GATGTTGCCTATCATACTTC+TGG | 0.369007 | 4.3:-10112471 | MS.gene061777:CDS |
| GCAATTGACAAAGACACTTC+TGG | 0.392622 | 4.3:-10111362 | MS.gene061777:CDS |
| AGTTCCTCAAAATATTTCTC+AGG | 0.401647 | 4.3:+10111518 | None:intergenic |
| TTATTGAGGGCAGCAATTAA+GGG | 0.414248 | 4.3:-10111551 | MS.gene061777:CDS |
| ATCACTATAACAATGAGTTT+GGG | 0.415323 | 4.3:-10111910 | MS.gene061777:CDS |
| GAGGAACACTGTTTCTTCTC+TGG | 0.435446 | 4.3:+10111393 | None:intergenic |
| GCAGGATTTGGAAACTGATT+CGG | 0.447953 | 4.3:-10111591 | MS.gene061777:intron |
| TGTGGGCATACACCGTTATG+AGG | 0.458266 | 4.3:-10112071 | MS.gene061777:CDS |
| TTGTTGTTACAATCCTGATC+AGG | 0.458748 | 4.3:+10111963 | None:intergenic |
| ACAGGATGGGGAACGAATGA+AGG | 0.469249 | 4.3:-10113010 | MS.gene061777:intron |
| GATAGGCAACATCTTCTTCA+AGG | 0.470858 | 4.3:+10112481 | None:intergenic |
| ACAATCATGATGACCTGATC+AGG | 0.471756 | 4.3:-10111976 | MS.gene061777:CDS |
| ATGAATATCTGAAATTATTG+AGG | 0.486467 | 4.3:-10111565 | MS.gene061777:CDS |
| AGCTGTGCTGCTGTGGACAT+TGG | 0.493673 | 4.3:-10112652 | MS.gene061777:CDS |
| GAAAATTCTCCTTGCACTGA+TGG | 0.493991 | 4.3:-10111330 | MS.gene061777:CDS |
| GAGAAGAAACAGTGTTCCTC+TGG | 0.495918 | 4.3:-10111390 | MS.gene061777:CDS |
| GAGCTGCATTTCTATGAGCC+AGG | 0.520838 | 4.3:+10112972 | None:intergenic |
| CTTTAAGAAGATCTTCTCCA+TGG | 0.522934 | 4.3:+10112915 | None:intergenic |
| TGAATATCTGAAATTATTGA+GGG | 0.538168 | 4.3:-10111564 | MS.gene061777:CDS |
| TAGGCTGGCTATAAACAAGA+TGG | 0.541067 | 4.3:-10111492 | MS.gene061777:CDS |
| AAAATTCTCCTTGCACTGAT+GGG | 0.542533 | 4.3:-10111329 | MS.gene061777:CDS |
| AACAGAAAGCTGTGCTGCTG+TGG | 0.544066 | 4.3:-10112659 | MS.gene061777:intron |
| AATTGTTCACTGTCTTCTGA+TGG | 0.548405 | 4.3:+10113551 | None:intergenic |
| AAGTTCAAGTGGAGATCTTG+TGG | 0.549416 | 4.3:+10112545 | None:intergenic |
| GATGGAGAAGGAACGTGAGA+GGG | 0.549677 | 4.3:+10113569 | None:intergenic |
| TCTTGTTTATAGCCAGCCTA+AGG | 0.557307 | 4.3:+10111495 | None:intergenic |
| AGGCTTGATAATATCGATCC+TGG | 0.557589 | 4.3:-10112990 | MS.gene061777:CDS |
| GTTCCTCAAAATATTTCTCA+GGG | 0.565806 | 4.3:+10111519 | None:intergenic |
| GCTGCTGTGGACATTGGATC+CGG | 0.567043 | 4.3:-10112646 | MS.gene061777:CDS |
| GGGTCTGCGTGTAAGTTTCG+CGG | 0.567457 | 4.3:+10112936 | None:intergenic |
| GATGTCACCAGAAGTATGAT+AGG | 0.569427 | 4.3:+10112464 | None:intergenic |
| GGTTGATTTGCAGCGAATTG+CGG | 0.585356 | 4.3:-10111423 | MS.gene061777:CDS |
| AAGTGTCTTTGTCAATTGCA+CGG | 0.589714 | 4.3:+10111366 | None:intergenic |
| TTTAAGAAGATCTTCTCCAT+GGG | 0.594102 | 4.3:+10112916 | None:intergenic |
| TTGTCAATTGCACGGTCCAG+AGG | 0.595483 | 4.3:+10111374 | None:intergenic |
| TCACCTCATCTCCCTCATAA+CGG | 0.595788 | 4.3:+10112059 | None:intergenic |
| TGATGGAGAAGGAACGTGAG+AGG | 0.596195 | 4.3:+10113568 | None:intergenic |
| ATAGGCAACATCTTCTTCAA+GGG | 0.598603 | 4.3:+10112482 | None:intergenic |
| TGATTTGCAGCGAATTGCGG+AGG | 0.598869 | 4.3:-10111420 | MS.gene061777:CDS |
| TGAAAATGCTCTTACTAGAG+TGG | 0.606160 | 4.3:-10111462 | MS.gene061777:CDS |
| CATCATGTCCCATCAGTGCA+AGG | 0.606991 | 4.3:+10111321 | None:intergenic |
| ATTGCTTCATGAGAAGATTG+CGG | 0.611914 | 4.3:-10112008 | MS.gene061777:CDS |
| GTGGGCATACACCGTTATGA+GGG | 0.616438 | 4.3:-10112070 | MS.gene061777:CDS |
| GAAACTTACACGCAGACCCA+TGG | 0.623172 | 4.3:-10112932 | MS.gene061777:CDS |
| AGGCTGGCTATAAACAAGAT+GGG | 0.624496 | 4.3:-10111491 | MS.gene061777:CDS |
| AGATGAGGTGAACATGACAT+TGG | 0.629033 | 4.3:-10112047 | MS.gene061777:CDS |
| TAACGGTGTATGCCCACAAG+AGG | 0.631350 | 4.3:+10112076 | None:intergenic |
| CTCAAAATATTTCTCAGGGT+AGG | 0.640542 | 4.3:+10111523 | None:intergenic |
| TCACTGTCTTCTGATGGAGA+AGG | 0.641986 | 4.3:+10113557 | None:intergenic |
| ATGGAGAAGGAACGTGAGAG+GGG | 0.642321 | 4.3:+10113570 | None:intergenic |
| TTTGCCTTAAGAAGTTCAAG+TGG | 0.642700 | 4.3:+10112534 | None:intergenic |
| ACACCGTTATGAGGGAGATG+AGG | 0.647772 | 4.3:-10112062 | MS.gene061777:CDS |
| TTCAAACAATTCGATCATCG+TGG | 0.667000 | 4.3:-10112577 | MS.gene061777:CDS |
| TACTTCTGGTGACATCCGCA+AGG | 0.668178 | 4.3:-10112457 | MS.gene061777:intron |
| AGTGGTGACAACTAGAGCTG+AGG | 0.671413 | 4.3:-10111444 | MS.gene061777:CDS |
| GTTTGGGAATGTAATAGACA+AGG | 0.682197 | 4.3:-10111894 | MS.gene061777:intron |
| TGATCAGGATTGTAACAACA+AGG | 0.686508 | 4.3:-10111961 | MS.gene061777:CDS |
| GAAGACAGTGAACAATTGCG+CGG | 0.707759 | 4.3:-10113545 | MS.gene061777:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTAAAATTTTGATATA+TGG | - | chr4.3:10112045-10112064 | MS.gene061777:CDS | 10.0% |
| !!! | ATTAACTTCCTTTTAATTAA+AGG | - | chr4.3:10113191-10113210 | MS.gene061777:intron | 15.0% |
| !!! | TTAACTTCCTTTTAATTAAA+GGG | - | chr4.3:10113192-10113211 | MS.gene061777:intron | 15.0% |
| !! | AAAGGTTAAATACATATAAC+TGG | + | chr4.3:10112715-10112734 | None:intergenic | 20.0% |
| !! | ACAGAAATAAGAATCATAAA+TGG | + | chr4.3:10113049-10113068 | None:intergenic | 20.0% |
| !! | ATATTTCTTGAAGAGAAAAA+TGG | + | chr4.3:10113137-10113156 | None:intergenic | 20.0% |
| !! | CAAGAAATTAGTAAGTTTAA+GGG | + | chr4.3:10112476-10112495 | None:intergenic | 20.0% |
| !! | CTAATATCTTAATTAGATCA+TGG | - | chr4.3:10111509-10111528 | MS.gene061777:CDS | 20.0% |
| !! | CTATAATCCCTTTAATTAAA+AGG | + | chr4.3:10113202-10113221 | None:intergenic | 20.0% |
| !! | CTTCATCAATAATATGATTA+TGG | + | chr4.3:10113169-10113188 | None:intergenic | 20.0% |
| !! | TCAAGAAATTAGTAAGTTTA+AGG | + | chr4.3:10112477-10112496 | None:intergenic | 20.0% |
| !! | TGAAATAAAAGTCAAAGAAA+TGG | + | chr4.3:10111411-10111430 | None:intergenic | 20.0% |
| !!! | ATATTTCTAGTTAATGAATG+TGG | - | chr4.3:10111621-10111640 | MS.gene061777:intron | 20.0% |
| !!! | ATGAATATCTGAAATTATTG+AGG | - | chr4.3:10113338-10113357 | MS.gene061777:intron | 20.0% |
| !!! | TGAATATCTGAAATTATTGA+GGG | - | chr4.3:10113339-10113358 | MS.gene061777:intron | 20.0% |
| !!! | TGTAAATCTTTTCAACTTTA+AGG | - | chr4.3:10112596-10112615 | MS.gene061777:CDS | 20.0% |
| ! | AAAATCTTCCAAAATTTACG+TGG | - | chr4.3:10112573-10112592 | MS.gene061777:CDS | 25.0% |
| ! | AAACAAAATTTCATCAGACA+AGG | + | chr4.3:10112781-10112800 | None:intergenic | 25.0% |
| ! | AACAAAATTTCATCAGACAA+GGG | + | chr4.3:10112780-10112799 | None:intergenic | 25.0% |
| ! | AATCACTATAACAATGAGTT+TGG | - | chr4.3:10112992-10113011 | MS.gene061777:CDS | 25.0% |
| ! | ATCAATAATATGATTATGGC+TGG | + | chr4.3:10113165-10113184 | None:intergenic | 25.0% |
| ! | ATCACTATAACAATGAGTTT+GGG | - | chr4.3:10112993-10113012 | MS.gene061777:CDS | 25.0% |
| ! | GTTAAATACATATAACTGGT+TGG | + | chr4.3:10112711-10112730 | None:intergenic | 25.0% |
| ! | TAAAAGTCAAAGAAATGGAT+CGG | + | chr4.3:10111406-10111425 | None:intergenic | 25.0% |
| ! | TACAAACCCTAGTAAAAAAA+AGG | + | chr4.3:10113266-10113285 | None:intergenic | 25.0% |
| ! | TATATGAATAACCTTGACTA+AGG | - | chr4.3:10112173-10112192 | MS.gene061777:intron | 25.0% |
| ! | TCAACAATTGTTAGTGAAAA+TGG | + | chr4.3:10112119-10112138 | None:intergenic | 25.0% |
| ! | TCAATAATATGATTATGGCT+GGG | + | chr4.3:10113164-10113183 | None:intergenic | 25.0% |
| ! | TCAATTTCTTCTGTAGAAAA+AGG | - | chr4.3:10113236-10113255 | MS.gene061777:intron | 25.0% |
| !! | ATTCTTTTGACATAAATCTG+AGG | + | chr4.3:10112647-10112666 | None:intergenic | 25.0% |
| !! | TTTTTCCTTTGTGTTTTTCA+TGG | - | chr4.3:10111812-10111831 | MS.gene061777:intron | 25.0% |
| !!! | AGGATAACCTTTTTTTTACT+AGG | - | chr4.3:10113256-10113275 | MS.gene061777:intron | 25.0% |
| !!! | CAAGGTATTTTCATGTAATA+AGG | - | chr4.3:10112204-10112223 | MS.gene061777:intron | 25.0% |
| !!! | GGATAACCTTTTTTTTACTA+GGG | - | chr4.3:10113257-10113276 | MS.gene061777:intron | 25.0% |
| AAACAACAATATGAATGGAC+AGG | + | chr4.3:10111858-10111877 | None:intergenic | 30.0% | |
| AATAAGCAGTGCTCAAATAA+GGG | - | chr4.3:10111782-10111801 | MS.gene061777:intron | 30.0% | |
| ACAAAATTTCATCAGACAAG+GGG | + | chr4.3:10112779-10112798 | None:intergenic | 30.0% | |
| AGTTCCTCAAAATATTTCTC+AGG | + | chr4.3:10113388-10113407 | None:intergenic | 30.0% | |
| GCATAAGCATAAACATGAAA+AGG | + | chr4.3:10112733-10112752 | None:intergenic | 30.0% | |
| GGCATTCTTCTACTAAATAA+AGG | + | chr4.3:10112626-10112645 | None:intergenic | 30.0% | |
| GTTCCTCAAAATATTTCTCA+GGG | + | chr4.3:10113387-10113406 | None:intergenic | 30.0% | |
| TTTAAGAAGATCTTCTCCAT+GGG | + | chr4.3:10111990-10112009 | None:intergenic | 30.0% | |
| ! | GATTTACACCACGTAAATTT+TGG | + | chr4.3:10112584-10112603 | None:intergenic | 30.0% |
| ! | TAGACAAGGTATGAATGTTT+TGG | - | chr4.3:10113023-10113042 | MS.gene061777:intron | 30.0% |
| ! | TGATTCTTCTCAAAAGCTTT+TGG | - | chr4.3:10112802-10112821 | MS.gene061777:intron | 30.0% |
| !! | AATATTTTGAGGAACTCCTT+AGG | - | chr4.3:10113392-10113411 | MS.gene061777:intron | 30.0% |
| !! | AGAACTTTCAAGTGATTTTG+AGG | - | chr4.3:10112021-10112040 | MS.gene061777:CDS | 30.0% |
| !! | GTCCATTCATATTGTTGTTT+CGG | - | chr4.3:10111858-10111877 | MS.gene061777:intron | 30.0% |
| !! | GTGACATATTTTTACAGGAT+GGG | - | chr4.3:10111880-10111899 | MS.gene061777:intron | 30.0% |
| !! | TGACATATTTTTACAGGATG+GGG | - | chr4.3:10111881-10111900 | MS.gene061777:intron | 30.0% |
| !! | TTTCGGTGACATATTTTTAC+AGG | - | chr4.3:10111875-10111894 | MS.gene061777:intron | 30.0% |
| !!! | CAACATTTTAGTTGCTTGAT+TGG | + | chr4.3:10112304-10112323 | None:intergenic | 30.0% |
| !!! | TCTAGTAAGAGCATTTTCAT+CGG | + | chr4.3:10113440-10113459 | None:intergenic | 30.0% |
| AAAAACGTCAGATCAAGACA+TGG | + | chr4.3:10112755-10112774 | None:intergenic | 35.0% | |
| AAAAATACACCCATCTTGGT+GGG | - | chr4.3:10112678-10112697 | MS.gene061777:intron | 35.0% | |
| AAGTGTCTTTGTCAATTGCA+CGG | + | chr4.3:10113540-10113559 | None:intergenic | 35.0% | |
| AAGTTTAAGGGTTTACCTTG+CGG | + | chr4.3:10112464-10112483 | None:intergenic | 35.0% | |
| AATTGTTCACTGTCTTCTGA+TGG | + | chr4.3:10111355-10111374 | None:intergenic | 35.0% | |
| ATAGGCAACATCTTCTTCAA+GGG | + | chr4.3:10112424-10112443 | None:intergenic | 35.0% | |
| ATCTCCACTTGAACTTCTTA+AGG | - | chr4.3:10112365-10112384 | MS.gene061777:intron | 35.0% | |
| ATTATTGAGGGCAGCAATTA+AGG | - | chr4.3:10113351-10113370 | MS.gene061777:intron | 35.0% | |
| ATTGCTTCATGAGAAGATTG+CGG | - | chr4.3:10112895-10112914 | MS.gene061777:CDS | 35.0% | |
| CAAAATTTCATCAGACAAGG+GGG | + | chr4.3:10112778-10112797 | None:intergenic | 35.0% | |
| CACCGAAACAACAATATGAA+TGG | + | chr4.3:10111863-10111882 | None:intergenic | 35.0% | |
| CTCAAAATATTTCTCAGGGT+AGG | + | chr4.3:10113383-10113402 | None:intergenic | 35.0% | |
| GAATAAGCAGTGCTCAAATA+AGG | - | chr4.3:10111781-10111800 | MS.gene061777:intron | 35.0% | |
| GATTCATCGTGATCATGATT+TGG | + | chr4.3:10111718-10111737 | None:intergenic | 35.0% | |
| GTTTGGGAATGTAATAGACA+AGG | - | chr4.3:10113009-10113028 | MS.gene061777:CDS | 35.0% | |
| TCATGCCATGAAAAACACAA+AGG | + | chr4.3:10111820-10111839 | None:intergenic | 35.0% | |
| TGAAAATGCTCTTACTAGAG+TGG | - | chr4.3:10113441-10113460 | MS.gene061777:intron | 35.0% | |
| TGATCAGGATTGTAACAACA+AGG | - | chr4.3:10112942-10112961 | MS.gene061777:CDS | 35.0% | |
| TTATTGAGGGCAGCAATTAA+GGG | - | chr4.3:10113352-10113371 | MS.gene061777:intron | 35.0% | |
| TTCAAACAATTCGATCATCG+TGG | - | chr4.3:10112326-10112345 | MS.gene061777:intron | 35.0% | |
| TTCCAAAAATACACCCATCT+TGG | - | chr4.3:10112674-10112693 | MS.gene061777:intron | 35.0% | |
| TTGACATGAAACCTTAGTCA+AGG | + | chr4.3:10112187-10112206 | None:intergenic | 35.0% | |
| TTGACTAAGGTTTCATGTCA+AGG | - | chr4.3:10112186-10112205 | MS.gene061777:intron | 35.0% | |
| TTTGCCTTAAGAAGTTCAAG+TGG | + | chr4.3:10112372-10112391 | None:intergenic | 35.0% | |
| TTTGGACTACATGAAGAGAT+CGG | + | chr4.3:10111700-10111719 | None:intergenic | 35.0% | |
| ! | AAAATTCTCCTTGCACTGAT+GGG | - | chr4.3:10113574-10113593 | MS.gene061777:CDS | 35.0% |
| ! | CTACCCTGAGAAATATTTTG+AGG | - | chr4.3:10113381-10113400 | MS.gene061777:intron | 35.0% |
| ! | CTTTAAGAAGATCTTCTCCA+TGG | + | chr4.3:10111991-10112010 | None:intergenic | 35.0% |
| ! | TTGTTGTTACAATCCTGATC+AGG | + | chr4.3:10112943-10112962 | None:intergenic | 35.0% |
| !! | CTTCAAGGGACTTTTTGAAA+CGG | + | chr4.3:10112410-10112429 | None:intergenic | 35.0% |
| !! | GGTGACATATTTTTACAGGA+TGG | - | chr4.3:10111879-10111898 | MS.gene061777:intron | 35.0% |
| AAGTTCAAGTGGAGATCTTG+TGG | + | chr4.3:10112361-10112380 | None:intergenic | 40.0% | |
| ACAATCATGATGACCTGATC+AGG | - | chr4.3:10112927-10112946 | MS.gene061777:CDS | 40.0% | |
| ACACTCCTATGTTACGTGTT+TGG | - | chr4.3:10111555-10111574 | MS.gene061777:CDS | 40.0% | |
| ACCAACCAAACACGTAACAT+AGG | + | chr4.3:10111563-10111582 | None:intergenic | 40.0% | |
| AGATGAGGTGAACATGACAT+TGG | - | chr4.3:10112856-10112875 | MS.gene061777:intron | 40.0% | |
| AGTCAAAGAAATGGATCGGT+AGG | + | chr4.3:10111402-10111421 | None:intergenic | 40.0% | |
| CAAAAATACACCCATCTTGG+TGG | - | chr4.3:10112677-10112696 | MS.gene061777:intron | 40.0% | |
| GAAAATTCTCCTTGCACTGA+TGG | - | chr4.3:10113573-10113592 | MS.gene061777:CDS | 40.0% | |
| GATAGGCAACATCTTCTTCA+AGG | + | chr4.3:10112425-10112444 | None:intergenic | 40.0% | |
| GATGTTGCCTATCATACTTC+TGG | - | chr4.3:10112432-10112451 | MS.gene061777:intron | 40.0% | |
| GCAATTGACAAAGACACTTC+TGG | - | chr4.3:10113541-10113560 | MS.gene061777:CDS | 40.0% | |
| GCAGGATTTGGAAACTGATT+CGG | - | chr4.3:10113312-10113331 | MS.gene061777:intron | 40.0% | |
| TCATGAGAAGATTGCGGATA+AGG | - | chr4.3:10112901-10112920 | MS.gene061777:CDS | 40.0% | |
| TCCTATGTTACGTGTTTGGT+TGG | - | chr4.3:10111559-10111578 | MS.gene061777:CDS | 40.0% | |
| ! | AGGCTGGCTATAAACAAGAT+GGG | - | chr4.3:10113412-10113431 | MS.gene061777:intron | 40.0% |
| ! | AGGCTTGATAATATCGATCC+TGG | - | chr4.3:10111913-10111932 | MS.gene061777:CDS | 40.0% |
| ! | ATTAGATCTGCCCTTTTGCT+GGG | + | chr4.3:10113083-10113102 | None:intergenic | 40.0% |
| ! | CACCAAGATGGGTGTATTTT+TGG | + | chr4.3:10112679-10112698 | None:intergenic | 40.0% |
| ! | GATGTCACCAGAAGTATGAT+AGG | + | chr4.3:10112442-10112461 | None:intergenic | 40.0% |
| ! | TAGGCTGGCTATAAACAAGA+TGG | - | chr4.3:10113411-10113430 | MS.gene061777:intron | 40.0% |
| ! | TATTAGATCTGCCCTTTTGC+TGG | + | chr4.3:10113084-10113103 | None:intergenic | 40.0% |
| ! | TCTTGTTTATAGCCAGCCTA+AGG | + | chr4.3:10113411-10113430 | None:intergenic | 40.0% |
| !!! | AAAGCTTTTGGTTCCTCTTG+TGG | - | chr4.3:10112814-10112833 | MS.gene061777:intron | 40.0% |
| !!! | AAGCTTTTGGTTCCTCTTGT+GGG | - | chr4.3:10112815-10112834 | MS.gene061777:intron | 40.0% |
| GAAGACAGTGAACAATTGCG+CGG | - | chr4.3:10111358-10111377 | MS.gene061777:CDS | 45.0% | |
| GAGAAGAAACAGTGTTCCTC+TGG | - | chr4.3:10113513-10113532 | MS.gene061777:intron | 45.0% | |
| GGCTAAAAATGCATCACGCT+CGG | + | chr4.3:10112283-10112302 | None:intergenic | 45.0% | |
| TCACCTCATCTCCCTCATAA+CGG | + | chr4.3:10112847-10112866 | None:intergenic | 45.0% | |
| TCACTGTCTTCTGATGGAGA+AGG | + | chr4.3:10111349-10111368 | None:intergenic | 45.0% | |
| TCGAACTAACGTTGAGCTTC+TGG | - | chr4.3:10113287-10113306 | MS.gene061777:intron | 45.0% | |
| TTGCAACACTCCCAGCAAAA+GGG | - | chr4.3:10113070-10113089 | MS.gene061777:intron | 45.0% | |
| ! | GAGGAACACTGTTTCTTCTC+TGG | + | chr4.3:10113513-10113532 | None:intergenic | 45.0% |
| !! | GGTTGATTTGCAGCGAATTG+CGG | - | chr4.3:10113480-10113499 | MS.gene061777:intron | 45.0% |
| !! | TTTTGAGGAACTCCTTAGGC+TGG | - | chr4.3:10113396-10113415 | MS.gene061777:intron | 45.0% |
| !!! | ATTTTTATTATTATTACTTT+TGG | - | chr4.3:10111473-10111492 | MS.gene061777:CDS | 5.0% |
| AAAAATGCATCACGCTCGGC+CGG | + | chr4.3:10112279-10112298 | None:intergenic | 50.0% | |
| AATACACCCATCTTGGTGGG+TGG | - | chr4.3:10112681-10112700 | MS.gene061777:intron | 50.0% | |
| ACACCGTTATGAGGGAGATG+AGG | - | chr4.3:10112841-10112860 | MS.gene061777:intron | 50.0% | |
| ACAGGATGGGGAACGAATGA+AGG | - | chr4.3:10111893-10111912 | MS.gene061777:intron | 50.0% | |
| AGTGGTGACAACTAGAGCTG+AGG | - | chr4.3:10113459-10113478 | MS.gene061777:intron | 50.0% | |
| ATGGAGAAGGAACGTGAGAG+GGG | + | chr4.3:10111336-10111355 | None:intergenic | 50.0% | |
| CATCATGTCCCATCAGTGCA+AGG | + | chr4.3:10113585-10113604 | None:intergenic | 50.0% | |
| GAAACTTACACGCAGACCCA+TGG | - | chr4.3:10111971-10111990 | MS.gene061777:CDS | 50.0% | |
| GAGCTGCATTTCTATGAGCC+AGG | + | chr4.3:10111934-10111953 | None:intergenic | 50.0% | |
| GATGGAGAAGGAACGTGAGA+GGG | + | chr4.3:10111337-10111356 | None:intergenic | 50.0% | |
| GTGGGCATACACCGTTATGA+GGG | - | chr4.3:10112833-10112852 | MS.gene061777:intron | 50.0% | |
| GTTGCAACACTCCCAGCAAA+AGG | - | chr4.3:10113069-10113088 | MS.gene061777:intron | 50.0% | |
| TAACGGTGTATGCCCACAAG+AGG | + | chr4.3:10112830-10112849 | None:intergenic | 50.0% | |
| TACTTCTGGTGACATCCGCA+AGG | - | chr4.3:10112446-10112465 | MS.gene061777:intron | 50.0% | |
| TGATGGAGAAGGAACGTGAG+AGG | + | chr4.3:10111338-10111357 | None:intergenic | 50.0% | |
| TGTGGGCATACACCGTTATG+AGG | - | chr4.3:10112832-10112851 | MS.gene061777:intron | 50.0% | |
| TTGTCAATTGCACGGTCCAG+AGG | + | chr4.3:10113532-10113551 | None:intergenic | 50.0% | |
| ! | AACAGAAAGCTGTGCTGCTG+TGG | - | chr4.3:10112244-10112263 | MS.gene061777:intron | 50.0% |
| ! | CAATTGCGCGGTGCTTTTCA+AGG | - | chr4.3:10111370-10111389 | MS.gene061777:CDS | 50.0% |
| ! | TGATTTGCAGCGAATTGCGG+AGG | - | chr4.3:10113483-10113502 | MS.gene061777:intron | 50.0% |
| GCTGCTGTGGACATTGGATC+CGG | - | chr4.3:10112257-10112276 | MS.gene061777:intron | 55.0% | |
| GGCTATCCACCCACCAAGAT+GGG | + | chr4.3:10112690-10112709 | None:intergenic | 55.0% | |
| GGGTCTGCGTGTAAGTTTCG+CGG | + | chr4.3:10111970-10111989 | None:intergenic | 55.0% | |
| TGGCTATCCACCCACCAAGA+TGG | + | chr4.3:10112691-10112710 | None:intergenic | 55.0% | |
| ! | AACGTTGAGCTTCTGGCTGC+AGG | - | chr4.3:10113294-10113313 | MS.gene061777:intron | 55.0% |
| ! | AGCTGTGCTGCTGTGGACAT+TGG | - | chr4.3:10112251-10112270 | MS.gene061777:intron | 55.0% |
| ! | GAGCTTCTGGCTGCAGGATT+TGG | - | chr4.3:10113300-10113319 | MS.gene061777:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 10111316 | 10113609 | 10111316 | ID=MS.gene061777 |
| chr4.3 | mRNA | 10111316 | 10113609 | 10111316 | ID=MS.gene061777.t1;Parent=MS.gene061777 |
| chr4.3 | exon | 10113534 | 10113609 | 10113534 | ID=MS.gene061777.t1.exon1;Parent=MS.gene061777.t1 |
| chr4.3 | CDS | 10113534 | 10113609 | 10113534 | ID=cds.MS.gene061777.t1;Parent=MS.gene061777.t1 |
| chr4.3 | exon | 10112883 | 10113028 | 10112883 | ID=MS.gene061777.t1.exon2;Parent=MS.gene061777.t1 |
| chr4.3 | CDS | 10112883 | 10113028 | 10112883 | ID=cds.MS.gene061777.t1;Parent=MS.gene061777.t1 |
| chr4.3 | exon | 10112458 | 10112676 | 10112458 | ID=MS.gene061777.t1.exon3;Parent=MS.gene061777.t1 |
| chr4.3 | CDS | 10112458 | 10112676 | 10112458 | ID=cds.MS.gene061777.t1;Parent=MS.gene061777.t1 |
| chr4.3 | exon | 10111895 | 10112107 | 10111895 | ID=MS.gene061777.t1.exon4;Parent=MS.gene061777.t1 |
| chr4.3 | CDS | 10111895 | 10112107 | 10111895 | ID=cds.MS.gene061777.t1;Parent=MS.gene061777.t1 |
| chr4.3 | exon | 10111316 | 10111609 | 10111316 | ID=MS.gene061777.t1.exon5;Parent=MS.gene061777.t1 |
| chr4.3 | CDS | 10111316 | 10111609 | 10111316 | ID=cds.MS.gene061777.t1;Parent=MS.gene061777.t1 |
| Gene Sequence |
| Protein sequence |
