Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28077.t1 | QFP98439.1 | 99.7 | 315 | 1 | 0 | 1 | 315 | 1 | 315 | 8.70E-172 | 612.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28077.t1 | Q9XEE2 | 71.2 | 316 | 90 | 1 | 1 | 315 | 1 | 316 | 7.3e-127 | 454.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28077.t1 | Q42922 | 99.7 | 308 | 1 | 0 | 8 | 315 | 1 | 308 | 7.2e-168 | 599.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene28077 | -0.852298 | 5.06E-61 | -1.69E-46 |
| MS.gene04921 | MS.gene28077 | 0.805726 | 1.16E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene28077 | -0.818097 | 2.34E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene28077 | -0.815656 | 8.27E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene28077 | -0.820116 | 8.13E-53 | -1.69E-46 |
| MS.gene04932 | MS.gene28077 | 0.831108 | 2.01E-55 | -1.69E-46 |
| MS.gene049549 | MS.gene28077 | 0.802269 | 6.08E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene28077 | 0.813427 | 2.57E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene28077 | -0.838946 | 2.13E-57 | -1.69E-46 |
| MS.gene050082 | MS.gene28077 | 0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene28077 | -0.804898 | 1.73E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene28077 | -0.814927 | 1.20E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene28077 | -0.83772 | 4.40E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene28077 | -0.847141 | 1.39E-59 | -1.69E-46 |
| MS.gene050333 | MS.gene28077 | -0.801355 | 9.36E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene28077 | 0.861928 | 7.26E-64 | -1.69E-46 |
| MS.gene050444 | MS.gene28077 | -0.850747 | 1.39E-60 | -1.69E-46 |
| MS.gene050496 | MS.gene28077 | -0.828442 | 8.97E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene28077 | -0.836713 | 7.96E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene28077 | -0.843977 | 1.01E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene28077 | -0.842691 | 2.21E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene28077 | -0.831029 | 2.10E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene28077 | -0.80869 | 2.74E-50 | -1.69E-46 |
| MS.gene050809 | MS.gene28077 | 0.834424 | 3.02E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene28077 | -0.831942 | 1.25E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene28077 | -0.84386 | 1.08E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene28077 | -0.842588 | 2.36E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene28077 | -0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene051044 | MS.gene28077 | 0.838902 | 2.18E-57 | -1.69E-46 |
| MS.gene05104 | MS.gene28077 | 0.849878 | 2.44E-60 | -1.69E-46 |
| MS.gene051138 | MS.gene28077 | 0.869393 | 3.20E-66 | -1.69E-46 |
| MS.gene051268 | MS.gene28077 | -0.803075 | 4.14E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene28077 | -0.812024 | 5.22E-51 | -1.69E-46 |
| MS.gene051422 | MS.gene28077 | 0.844612 | 6.79E-59 | -1.69E-46 |
| MS.gene051439 | MS.gene28077 | 0.817931 | 2.55E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene28077 | 0.819938 | 8.93E-53 | -1.69E-46 |
| MS.gene051517 | MS.gene28077 | 0.815633 | 8.37E-52 | -1.69E-46 |
| MS.gene051632 | MS.gene28077 | 0.803279 | 3.76E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene28077 | 0.879929 | 8.34E-70 | -1.69E-46 |
| MS.gene051838 | MS.gene28077 | -0.800008 | 1.76E-48 | -1.69E-46 |
| MS.gene051863 | MS.gene28077 | 0.813863 | 2.06E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene28077 | -0.822949 | 1.80E-53 | -1.69E-46 |
| MS.gene051973 | MS.gene28077 | 0.806735 | 7.12E-50 | -1.69E-46 |
| MS.gene052129 | MS.gene28077 | 0.848511 | 5.85E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene28077 | -0.827483 | 1.53E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene28077 | 0.825598 | 4.30E-54 | -1.69E-46 |
| MS.gene052494 | MS.gene28077 | 0.818439 | 1.96E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene28077 | -0.809026 | 2.32E-50 | -1.69E-46 |
| MS.gene052606 | MS.gene28077 | 0.842208 | 2.98E-58 | -1.69E-46 |
| MS.gene052610 | MS.gene28077 | 0.815753 | 7.87E-52 | -1.69E-46 |
| MS.gene052702 | MS.gene28077 | 0.858768 | 6.57E-63 | -1.69E-46 |
| MS.gene052703 | MS.gene28077 | 0.800536 | 1.38E-48 | -1.69E-46 |
| MS.gene052710 | MS.gene28077 | 0.808719 | 2.70E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene28077 | -0.81678 | 4.64E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene28077 | -0.810161 | 1.32E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene28077 | 0.805505 | 1.29E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene28077 | -0.817617 | 3.01E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene28077 | 0.814745 | 1.32E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene28077 | -0.806328 | 8.68E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene28077 | -0.816031 | 6.82E-52 | -1.69E-46 |
| MS.gene053887 | MS.gene28077 | 0.812569 | 3.97E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene28077 | -0.822298 | 2.55E-53 | -1.69E-46 |
| MS.gene054181 | MS.gene28077 | 0.807698 | 4.45E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene28077 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene054344 | MS.gene28077 | -0.801487 | 8.80E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene28077 | -0.803873 | 2.83E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene28077 | 0.846462 | 2.14E-59 | -1.69E-46 |
| MS.gene05470 | MS.gene28077 | -0.859263 | 4.67E-63 | -1.69E-46 |
| MS.gene054884 | MS.gene28077 | 0.828342 | 9.48E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene28077 | 0.809569 | 1.77E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene28077 | -0.828684 | 7.84E-55 | -1.69E-46 |
| MS.gene055158 | MS.gene28077 | 0.819863 | 9.29E-53 | -1.69E-46 |
| MS.gene055251 | MS.gene28077 | 0.847365 | 1.21E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene28077 | -0.815629 | 8.38E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene28077 | -0.850604 | 1.53E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene28077 | -0.829745 | 4.33E-55 | -1.69E-46 |
| MS.gene055729 | MS.gene28077 | 0.822735 | 2.02E-53 | -1.69E-46 |
| MS.gene055730 | MS.gene28077 | 0.83358 | 4.92E-56 | -1.69E-46 |
| MS.gene055731 | MS.gene28077 | 0.831253 | 1.85E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene28077 | -0.853349 | 2.53E-61 | -1.69E-46 |
| MS.gene055750 | MS.gene28077 | -0.831729 | 1.42E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene28077 | -0.852801 | 3.64E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene28077 | -0.858514 | 7.82E-63 | -1.69E-46 |
| MS.gene055942 | MS.gene28077 | 0.851498 | 8.54E-61 | -1.69E-46 |
| MS.gene056198 | MS.gene28077 | 0.827149 | 1.84E-54 | -1.69E-46 |
| MS.gene056224 | MS.gene28077 | 0.822264 | 2.60E-53 | -1.69E-46 |
| MS.gene056266 | MS.gene28077 | -0.810327 | 1.22E-50 | -1.69E-46 |
| MS.gene056354 | MS.gene28077 | 0.803316 | 3.70E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene28077 | -0.834621 | 2.70E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene28077 | -0.850586 | 1.54E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene28077 | -0.806352 | 8.58E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene28077 | 0.834333 | 3.19E-56 | -1.69E-46 |
| MS.gene056591 | MS.gene28077 | 0.835503 | 1.62E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene28077 | -0.81434 | 1.62E-51 | -1.69E-46 |
| MS.gene056678 | MS.gene28077 | 0.825371 | 4.86E-54 | -1.69E-46 |
| MS.gene056688 | MS.gene28077 | 0.835514 | 1.60E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene28077 | -0.806099 | 9.70E-50 | -1.69E-46 |
| MS.gene056694 | MS.gene28077 | 0.858679 | 6.98E-63 | -1.69E-46 |
| MS.gene056697 | MS.gene28077 | 0.876639 | 1.19E-68 | -1.69E-46 |
| MS.gene056748 | MS.gene28077 | 0.814819 | 1.27E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene28077 | 0.879453 | 1.23E-69 | -1.69E-46 |
| MS.gene056857 | MS.gene28077 | 0.821468 | 3.97E-53 | -1.69E-46 |
| MS.gene057086 | MS.gene28077 | -0.807078 | 6.02E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene28077 | 0.807199 | 5.68E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene28077 | 0.82039 | 7.03E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene28077 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene28077 | 0.844311 | 8.18E-59 | -1.69E-46 |
| MS.gene057606 | MS.gene28077 | 0.807453 | 5.02E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene28077 | -0.803964 | 2.71E-49 | -1.69E-46 |
| MS.gene057717 | MS.gene28077 | 0.855201 | 7.40E-62 | -1.69E-46 |
| MS.gene057768 | MS.gene28077 | 0.846163 | 2.58E-59 | -1.69E-46 |
| MS.gene058067 | MS.gene28077 | 0.828836 | 7.20E-55 | -1.69E-46 |
| MS.gene058068 | MS.gene28077 | 0.865812 | 4.50E-65 | -1.69E-46 |
| MS.gene058099 | MS.gene28077 | 0.82629 | 2.94E-54 | -1.69E-46 |
| MS.gene058117 | MS.gene28077 | 0.805042 | 1.62E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene28077 | 0.808544 | 2.94E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene28077 | 0.812863 | 3.42E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene28077 | 0.829955 | 3.85E-55 | -1.69E-46 |
| MS.gene058269 | MS.gene28077 | 0.827698 | 1.36E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene28077 | 0.86257 | 4.61E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene28077 | -0.812879 | 3.40E-51 | -1.69E-46 |
| MS.gene058382 | MS.gene28077 | 0.863809 | 1.91E-64 | -1.69E-46 |
| MS.gene058418 | MS.gene28077 | 0.803638 | 3.17E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene28077 | -0.833278 | 5.84E-56 | -1.69E-46 |
| MS.gene058452 | MS.gene28077 | 0.839349 | 1.67E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene28077 | -0.826804 | 2.22E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene28077 | 0.842396 | 2.65E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene28077 | -0.848397 | 6.29E-60 | -1.69E-46 |
| MS.gene059022 | MS.gene28077 | -0.82502 | 5.89E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene28077 | -0.823461 | 1.37E-53 | -1.69E-46 |
| MS.gene059045 | MS.gene28077 | 0.807563 | 4.75E-50 | -1.69E-46 |
| MS.gene059069 | MS.gene28077 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene059070 | MS.gene28077 | 0.801953 | 7.06E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene28077 | -0.809056 | 2.28E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene28077 | 0.885824 | 5.83E-72 | -1.69E-46 |
| MS.gene059315 | MS.gene28077 | 0.830118 | 3.52E-55 | -1.69E-46 |
| MS.gene05960 | MS.gene28077 | 0.805449 | 1.33E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene28077 | -0.802867 | 4.58E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene28077 | -0.828889 | 6.99E-55 | -1.69E-46 |
| MS.gene059699 | MS.gene28077 | 0.835704 | 1.44E-56 | -1.69E-46 |
| MS.gene059701 | MS.gene28077 | 0.820719 | 5.91E-53 | -1.69E-46 |
| MS.gene059703 | MS.gene28077 | 0.85311 | 2.97E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene28077 | -0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene28077 | -0.851943 | 6.38E-61 | -1.69E-46 |
| MS.gene059953 | MS.gene28077 | 0.824088 | 9.76E-54 | -1.69E-46 |
| MS.gene059955 | MS.gene28077 | 0.823537 | 1.31E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene28077 | -0.830821 | 2.37E-55 | -1.69E-46 |
| MS.gene060087 | MS.gene28077 | 0.803356 | 3.62E-49 | -1.69E-46 |
| MS.gene06027 | MS.gene28077 | -0.810641 | 1.04E-50 | -1.69E-46 |
| MS.gene060405 | MS.gene28077 | 0.873029 | 2.02E-67 | -1.69E-46 |
| MS.gene06042 | MS.gene28077 | 0.801885 | 7.29E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene28077 | 0.828446 | 8.95E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene28077 | -0.846132 | 2.63E-59 | -1.69E-46 |
| MS.gene060778 | MS.gene28077 | -0.826332 | 2.88E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene28077 | -0.812948 | 3.28E-51 | -1.69E-46 |
| MS.gene060823 | MS.gene28077 | 0.817181 | 3.77E-52 | -1.69E-46 |
| MS.gene06084 | MS.gene28077 | 0.82723 | 1.75E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene28077 | -0.84545 | 4.03E-59 | -1.69E-46 |
| MS.gene061038 | MS.gene28077 | 0.804941 | 1.70E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene28077 | 0.893278 | 7.30E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28077 | MS.gene029299 | PPI |
| MS.gene28077 | MS.gene010215 | PPI |
| MS.gene28077 | MS.gene067369 | PPI |
| MS.gene28077 | MS.gene93736 | PPI |
| MS.gene036493 | MS.gene28077 | PPI |
| MS.gene28077 | MS.gene92405 | PPI |
| MS.gene57291 | MS.gene28077 | PPI |
| MS.gene28077 | MS.gene043964 | PPI |
| MS.gene45772 | MS.gene28077 | PPI |
| MS.gene28077 | MS.gene040887 | PPI |
| MS.gene28077 | MS.gene85401 | PPI |
| MS.gene041553 | MS.gene28077 | PPI |
| MS.gene047030 | MS.gene28077 | PPI |
| MS.gene28077 | MS.gene87117 | PPI |
| MS.gene056195 | MS.gene28077 | PPI |
| MS.gene065031 | MS.gene28077 | PPI |
| MS.gene28077 | MS.gene030809 | PPI |
| MS.gene28077 | MS.gene76197 | PPI |
| MS.gene28077 | MS.gene047020 | PPI |
| MS.gene28077 | MS.gene061777 | PPI |
| MS.gene28077 | MS.gene55897 | PPI |
| MS.gene28077 | MS.gene74945 | PPI |
| MS.gene28077 | MS.gene00058 | PPI |
| MS.gene016642 | MS.gene28077 | PPI |
| MS.gene28077 | MS.gene026445 | PPI |
| MS.gene28077 | MS.gene89484 | PPI |
| MS.gene28077 | MS.gene040097 | PPI |
| MS.gene28077 | MS.gene27444 | PPI |
| MS.gene28077 | MS.gene058336 | PPI |
| MS.gene28077 | MS.gene035327 | PPI |
| MS.gene28077 | MS.gene67887 | PPI |
| MS.gene28077 | MS.gene035891 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28077.t1 | MTR_0276s0050 | 97.143 | 315 | 9 | 0 | 1 | 315 | 1 | 315 | 0.0 | 624 |
| MS.gene28077.t1 | MTR_5g063670 | 66.032 | 315 | 107 | 0 | 1 | 315 | 1 | 315 | 1.70e-154 | 435 |
| MS.gene28077.t1 | MTR_8g038210 | 51.429 | 315 | 151 | 2 | 1 | 315 | 1 | 313 | 6.01e-105 | 309 |
| MS.gene28077.t1 | MTR_3g018790 | 50.476 | 315 | 155 | 1 | 1 | 315 | 1 | 314 | 1.03e-103 | 306 |
| MS.gene28077.t1 | MTR_8g038220 | 50.962 | 312 | 152 | 1 | 1 | 312 | 1 | 311 | 1.92e-103 | 305 |
| MS.gene28077.t1 | MTR_3g018780 | 49.524 | 315 | 157 | 2 | 1 | 314 | 1 | 314 | 1.20e-102 | 303 |
| MS.gene28077.t1 | MTR_8g038220 | 51.118 | 313 | 149 | 2 | 1 | 312 | 1 | 310 | 1.76e-102 | 303 |
| MS.gene28077.t1 | MTR_8g038180 | 50.641 | 312 | 153 | 1 | 1 | 312 | 1 | 311 | 1.53e-100 | 298 |
| MS.gene28077.t1 | MTR_8g038210 | 49.524 | 315 | 157 | 2 | 1 | 315 | 1 | 313 | 8.55e-100 | 296 |
| MS.gene28077.t1 | MTR_2g031980 | 43.234 | 303 | 172 | 0 | 12 | 314 | 11 | 313 | 1.24e-89 | 270 |
| MS.gene28077.t1 | MTR_8g038150 | 42.857 | 315 | 177 | 1 | 1 | 312 | 1 | 315 | 5.29e-82 | 251 |
| MS.gene28077.t1 | MTR_3g018790 | 49.587 | 242 | 122 | 0 | 74 | 315 | 19 | 260 | 3.80e-75 | 231 |
| MS.gene28077.t1 | MTR_8g107640 | 37.855 | 317 | 193 | 3 | 1 | 315 | 1 | 315 | 1.76e-72 | 226 |
| MS.gene28077.t1 | MTR_1g033560 | 36.076 | 316 | 198 | 3 | 1 | 314 | 1 | 314 | 1.68e-66 | 211 |
| MS.gene28077.t1 | MTR_6g071605 | 35.783 | 313 | 199 | 2 | 1 | 312 | 1 | 312 | 3.51e-65 | 207 |
| MS.gene28077.t1 | MTR_6g071615 | 37.580 | 314 | 192 | 3 | 1 | 312 | 1 | 312 | 1.25e-64 | 206 |
| MS.gene28077.t1 | MTR_1g112520 | 36.624 | 314 | 195 | 3 | 1 | 312 | 1 | 312 | 2.65e-62 | 200 |
| MS.gene28077.t1 | MTR_6g071595 | 36.943 | 314 | 194 | 3 | 1 | 312 | 1 | 312 | 3.45e-56 | 184 |
| MS.gene28077.t1 | MTR_3g018920 | 44.811 | 212 | 84 | 2 | 1 | 212 | 1 | 179 | 1.57e-53 | 173 |
| MS.gene28077.t1 | MTR_8g038170 | 36.792 | 318 | 172 | 8 | 14 | 312 | 4 | 311 | 4.49e-50 | 169 |
| MS.gene28077.t1 | MTR_8g038170 | 36.792 | 318 | 172 | 8 | 14 | 312 | 4 | 311 | 4.49e-50 | 169 |
| MS.gene28077.t1 | MTR_6g071595 | 35.317 | 252 | 159 | 3 | 1 | 250 | 1 | 250 | 2.28e-38 | 137 |
| MS.gene28077.t1 | MTR_6g028030 | 26.277 | 274 | 194 | 5 | 45 | 310 | 34 | 307 | 6.37e-23 | 97.1 |
| MS.gene28077.t1 | MTR_3g018925 | 47.917 | 96 | 50 | 0 | 220 | 315 | 14 | 109 | 3.19e-22 | 89.7 |
| MS.gene28077.t1 | MTR_8g038090 | 43.478 | 69 | 38 | 1 | 245 | 312 | 22 | 90 | 3.04e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28077.t1 | AT5G65020 | 71.656 | 314 | 88 | 1 | 1 | 313 | 1 | 314 | 3.55e-170 | 475 |
| MS.gene28077.t1 | AT5G10230 | 71.019 | 314 | 91 | 0 | 1 | 314 | 1 | 314 | 1.61e-167 | 468 |
| MS.gene28077.t1 | AT5G10220 | 69.304 | 316 | 95 | 1 | 1 | 314 | 1 | 316 | 2.45e-162 | 455 |
| MS.gene28077.t1 | AT5G65020 | 72.664 | 289 | 78 | 1 | 26 | 313 | 11 | 299 | 3.09e-157 | 441 |
| MS.gene28077.t1 | AT1G35720 | 66.772 | 316 | 104 | 1 | 1 | 315 | 1 | 316 | 1.97e-154 | 435 |
| MS.gene28077.t1 | AT5G12380 | 51.438 | 313 | 151 | 1 | 1 | 313 | 1 | 312 | 1.80e-111 | 326 |
| MS.gene28077.t1 | AT2G38760 | 42.138 | 318 | 178 | 2 | 1 | 312 | 1 | 318 | 1.51e-82 | 253 |
| MS.gene28077.t1 | AT1G68090 | 37.380 | 313 | 195 | 1 | 1 | 312 | 1 | 313 | 8.00e-64 | 204 |
| MS.gene28077.t1 | AT1G68090 | 37.349 | 249 | 151 | 3 | 1 | 244 | 1 | 249 | 1.84e-43 | 150 |
| MS.gene28077.t1 | AT2G38750 | 35.526 | 304 | 171 | 6 | 26 | 311 | 2 | 298 | 2.74e-43 | 150 |
| MS.gene28077.t1 | AT2G38750 | 35.505 | 307 | 173 | 6 | 23 | 311 | 16 | 315 | 3.31e-43 | 151 |
Find 62 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGAGGGCAGCAATTA+AGG | 0.189714 | 4.4:-10702275 | MS.gene28077:CDS |
| AATCACTATAACAATGAGTT+TGG | 0.243154 | 4.4:-10702635 | MS.gene28077:CDS |
| ATCTCCACTTGAACTTCTTA+AGG | 0.350377 | 4.4:-10703262 | MS.gene28077:CDS |
| TCATGAGAAGATTGCGGATA+AGG | 0.357945 | 4.4:-10702726 | MS.gene28077:CDS |
| GATGTTGCCTATCATACTTC+TGG | 0.369007 | 4.4:-10703195 | MS.gene28077:CDS |
| GCAATTGACAAAGACACTTC+TGG | 0.392622 | 4.4:-10702085 | MS.gene28077:CDS |
| AGTTCCTCAAAATATTTCTC+AGG | 0.401647 | 4.4:+10702241 | None:intergenic |
| GGTTGATTTGCAGCGAATTA+CGG | 0.410963 | 4.4:-10702146 | MS.gene28077:CDS |
| TTATTGAGGGCAGCAATTAA+GGG | 0.414248 | 4.4:-10702274 | MS.gene28077:CDS |
| ATCACTATAACAATGAGTTT+GGG | 0.415323 | 4.4:-10702634 | MS.gene28077:CDS |
| GAGGAACACTGTTTCTTCTC+TGG | 0.435446 | 4.4:+10702116 | None:intergenic |
| GCAGGATTTGGAAACTGATT+CGG | 0.447953 | 4.4:-10702314 | MS.gene28077:intron |
| TGTGGGCATACACCGTTATG+AGG | 0.458266 | 4.4:-10702795 | MS.gene28077:CDS |
| TTGTTGTTACAATCCTGATC+AGG | 0.458748 | 4.4:+10702687 | None:intergenic |
| ACAGGATGGGGAACGAATGA+AGG | 0.469249 | 4.4:-10703734 | MS.gene28077:intron |
| GATAGGCAACATCTTCTTCA+AGG | 0.470858 | 4.4:+10703205 | None:intergenic |
| ACAATCATGATGACCTGATC+AGG | 0.471756 | 4.4:-10702700 | MS.gene28077:CDS |
| ATGAATATCTGAAATTATTG+AGG | 0.486467 | 4.4:-10702288 | MS.gene28077:CDS |
| AGCTGTGCTGCTGTGGACAT+TGG | 0.493673 | 4.4:-10703376 | MS.gene28077:CDS |
| GAAAATTCTCCTTGCACTGA+TGG | 0.493991 | 4.4:-10702053 | MS.gene28077:CDS |
| GAGAAGAAACAGTGTTCCTC+TGG | 0.495918 | 4.4:-10702113 | MS.gene28077:CDS |
| GAGCTGCATTTCTATGAGCC+AGG | 0.520838 | 4.4:+10703696 | None:intergenic |
| CTTTAAGAAGATCTTCTCCA+TGG | 0.522934 | 4.4:+10703639 | None:intergenic |
| TGAATATCTGAAATTATTGA+GGG | 0.538168 | 4.4:-10702287 | MS.gene28077:CDS |
| TAGGCTGGCTATAAACAAGA+TGG | 0.541067 | 4.4:-10702215 | MS.gene28077:CDS |
| AAAATTCTCCTTGCACTGAT+GGG | 0.542533 | 4.4:-10702052 | MS.gene28077:CDS |
| AACAGAAAGCTGTGCTGCTG+TGG | 0.544066 | 4.4:-10703383 | MS.gene28077:intron |
| AATTGTTCACTGTCTTCTGA+TGG | 0.548405 | 4.4:+10704287 | None:intergenic |
| AAGTTCAAGTGGAGATCTTG+TGG | 0.549416 | 4.4:+10703269 | None:intergenic |
| GATGGAGAAGGAACGTGAGA+GGG | 0.549677 | 4.4:+10704305 | None:intergenic |
| TCTTGTTTATAGCCAGCCTA+AGG | 0.557307 | 4.4:+10702218 | None:intergenic |
| AGGCTTGATAATATCGATCC+TGG | 0.557589 | 4.4:-10703714 | MS.gene28077:CDS |
| GTTCCTCAAAATATTTCTCA+GGG | 0.565806 | 4.4:+10702242 | None:intergenic |
| GCTGCTGTGGACATTGGATC+CGG | 0.567043 | 4.4:-10703370 | MS.gene28077:CDS |
| GGGTCTGCGTGTAAGTTTCG+CGG | 0.567457 | 4.4:+10703660 | None:intergenic |
| GATGTCACCAGAAGTATGAT+AGG | 0.569427 | 4.4:+10703188 | None:intergenic |
| AAGTGTCTTTGTCAATTGCA+CGG | 0.589714 | 4.4:+10702089 | None:intergenic |
| TTTAAGAAGATCTTCTCCAT+GGG | 0.594102 | 4.4:+10703640 | None:intergenic |
| TTGTCAATTGCACGGTCCAG+AGG | 0.595483 | 4.4:+10702097 | None:intergenic |
| TCACCTCATCTCCCTCATAA+CGG | 0.595788 | 4.4:+10702783 | None:intergenic |
| TGATGGAGAAGGAACGTGAG+AGG | 0.596195 | 4.4:+10704304 | None:intergenic |
| ATAGGCAACATCTTCTTCAA+GGG | 0.598603 | 4.4:+10703206 | None:intergenic |
| TGAAAATGCTCTTACTAGAG+TGG | 0.606160 | 4.4:-10702185 | MS.gene28077:CDS |
| CATCATGTCCCATCAGTGCA+AGG | 0.606991 | 4.4:+10702044 | None:intergenic |
| ATTGCTTCATGAGAAGATTG+CGG | 0.611914 | 4.4:-10702732 | MS.gene28077:CDS |
| GTGGGCATACACCGTTATGA+GGG | 0.616438 | 4.4:-10702794 | MS.gene28077:CDS |
| GAAACTTACACGCAGACCCA+TGG | 0.623172 | 4.4:-10703656 | MS.gene28077:CDS |
| AGGCTGGCTATAAACAAGAT+GGG | 0.624496 | 4.4:-10702214 | MS.gene28077:CDS |
| AGATGAGGTGAACATGACAT+TGG | 0.629033 | 4.4:-10702771 | MS.gene28077:CDS |
| TAACGGTGTATGCCCACAAG+AGG | 0.631350 | 4.4:+10702800 | None:intergenic |
| CTCAAAATATTTCTCAGGGT+AGG | 0.640542 | 4.4:+10702246 | None:intergenic |
| TCACTGTCTTCTGATGGAGA+AGG | 0.641986 | 4.4:+10704293 | None:intergenic |
| ATGGAGAAGGAACGTGAGAG+GGG | 0.642321 | 4.4:+10704306 | None:intergenic |
| TTTGCCTTAAGAAGTTCAAG+TGG | 0.642700 | 4.4:+10703258 | None:intergenic |
| ACACCGTTATGAGGGAGATG+AGG | 0.647772 | 4.4:-10702786 | MS.gene28077:CDS |
| TGATTTGCAGCGAATTACGG+AGG | 0.660268 | 4.4:-10702143 | MS.gene28077:CDS |
| TTCAAACAATTCGATCATCG+TGG | 0.667000 | 4.4:-10703301 | MS.gene28077:CDS |
| TACTTCTGGTGACATCCGCA+AGG | 0.668178 | 4.4:-10703181 | MS.gene28077:intron |
| AGTGGTGACAACTAGAGCTG+AGG | 0.671413 | 4.4:-10702167 | MS.gene28077:CDS |
| GTTTGGGAATGTAATAGACA+AGG | 0.682197 | 4.4:-10702618 | MS.gene28077:intron |
| TGATCAGGATTGTAACAACA+AGG | 0.686508 | 4.4:-10702685 | MS.gene28077:CDS |
| GAAGACAGTGAACAATTGCG+CGG | 0.707759 | 4.4:-10704281 | MS.gene28077:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTAAAATTTTGATATA+TGG | - | chr4.4:10702780-10702799 | MS.gene28077:CDS | 10.0% |
| !! | ATATTTCTTAAAGAGAAAAA+TGG | + | chr4.4:10703872-10703891 | None:intergenic | 15.0% |
| !!! | ATTAACTTCCTTTTAATTAA+AGG | - | chr4.4:10703926-10703945 | MS.gene28077:intron | 15.0% |
| !!! | TTAACTTCCTTTTAATTAAA+GGG | - | chr4.4:10703927-10703946 | MS.gene28077:intron | 15.0% |
| !! | AAAGGTTAAATACAAATAAC+TGG | + | chr4.4:10703450-10703469 | None:intergenic | 20.0% |
| !! | ACAGAAAAAAGAATCATAAA+TGG | + | chr4.4:10703784-10703803 | None:intergenic | 20.0% |
| !! | CAAGAAATTAGTAAGTTTAA+GGG | + | chr4.4:10703211-10703230 | None:intergenic | 20.0% |
| !! | CTAATATCTTAATTAGATCA+TGG | - | chr4.4:10702232-10702251 | MS.gene28077:CDS | 20.0% |
| !! | CTATAATCCCTTTAATTAAA+AGG | + | chr4.4:10703937-10703956 | None:intergenic | 20.0% |
| !! | CTTCATCAATAATATGATTA+TGG | + | chr4.4:10703904-10703923 | None:intergenic | 20.0% |
| !! | TCAAGAAATTAGTAAGTTTA+AGG | + | chr4.4:10703212-10703231 | None:intergenic | 20.0% |
| !! | TGAAATAAAAGTCAAAGAAA+TGG | + | chr4.4:10702134-10702153 | None:intergenic | 20.0% |
| !!! | ATATTTCTAGTTAATGAATG+TGG | - | chr4.4:10702344-10702363 | MS.gene28077:intron | 20.0% |
| !!! | ATGAATATCTGAAATTATTG+AGG | - | chr4.4:10704074-10704093 | MS.gene28077:intron | 20.0% |
| !!! | GATAACCTTTTTTTTTACTA+GGG | - | chr4.4:10703993-10704012 | MS.gene28077:intron | 20.0% |
| !!! | TGAATATCTGAAATTATTGA+GGG | - | chr4.4:10704075-10704094 | MS.gene28077:intron | 20.0% |
| !!! | TGTAAATCTTTTCAACTTTA+AGG | - | chr4.4:10703331-10703350 | MS.gene28077:CDS | 20.0% |
| ! | AAAATCTTCCAAAATTTACG+TGG | - | chr4.4:10703308-10703327 | MS.gene28077:CDS | 25.0% |
| ! | AAACAAAATTTCATCAGACA+AGG | + | chr4.4:10703516-10703535 | None:intergenic | 25.0% |
| ! | AACAAAATTTCATCAGACAA+GGG | + | chr4.4:10703515-10703534 | None:intergenic | 25.0% |
| ! | AATCACTATAACAATGAGTT+TGG | - | chr4.4:10703727-10703746 | MS.gene28077:CDS | 25.0% |
| ! | ACAAACCCTAGTAAAAAAAA+AGG | + | chr4.4:10704001-10704020 | None:intergenic | 25.0% |
| ! | ATCAATAATATGATTATGGC+TGG | + | chr4.4:10703900-10703919 | None:intergenic | 25.0% |
| ! | ATCACTATAACAATGAGTTT+GGG | - | chr4.4:10703728-10703747 | MS.gene28077:CDS | 25.0% |
| ! | GTTAAATACAAATAACTGGT+TGG | + | chr4.4:10703446-10703465 | None:intergenic | 25.0% |
| ! | TAAAAGTCAAAGAAATGGAT+CGG | + | chr4.4:10702129-10702148 | None:intergenic | 25.0% |
| ! | TATATGAATAACCTTGACTA+AGG | - | chr4.4:10702908-10702927 | MS.gene28077:intron | 25.0% |
| ! | TCAACAATTGTTAGTGAAAA+TGG | + | chr4.4:10702854-10702873 | None:intergenic | 25.0% |
| ! | TCAATAATATGATTATGGCT+GGG | + | chr4.4:10703899-10703918 | None:intergenic | 25.0% |
| ! | TCAATTTCTTCTGTAGAAAA+AGG | - | chr4.4:10703971-10703990 | MS.gene28077:intron | 25.0% |
| !! | ATTCTTTTGACATAAATCTG+AGG | + | chr4.4:10703382-10703401 | None:intergenic | 25.0% |
| !! | TTTTTCCTTTGTGTTTTTCA+TGG | - | chr4.4:10702543-10702562 | MS.gene28077:intron | 25.0% |
| !!! | CAAGGTATTTTCATGTAATA+AGG | - | chr4.4:10702939-10702958 | MS.gene28077:intron | 25.0% |
| !!! | GGATAACCTTTTTTTTTACT+AGG | - | chr4.4:10703992-10704011 | MS.gene28077:intron | 25.0% |
| AAACAACAATATGAATGGAC+AGG | + | chr4.4:10702593-10702612 | None:intergenic | 30.0% | |
| AAAGGGCAGATCTAATATAA+TGG | - | chr4.4:10703822-10703841 | MS.gene28077:intron | 30.0% | |
| AATAAGCAGTGCTCAAATAA+GGG | - | chr4.4:10702513-10702532 | MS.gene28077:intron | 30.0% | |
| ACAAAATTTCATCAGACAAG+GGG | + | chr4.4:10703514-10703533 | None:intergenic | 30.0% | |
| AGTTCCTCAAAATATTTCTC+AGG | + | chr4.4:10704124-10704143 | None:intergenic | 30.0% | |
| GCATAAGCATAAACATGAAA+AGG | + | chr4.4:10703468-10703487 | None:intergenic | 30.0% | |
| GGCATTCTTCTACTAAATAA+AGG | + | chr4.4:10703361-10703380 | None:intergenic | 30.0% | |
| GTTCCTCAAAATATTTCTCA+GGG | + | chr4.4:10704123-10704142 | None:intergenic | 30.0% | |
| TCATACCATGAAAAACACAA+AGG | + | chr4.4:10702551-10702570 | None:intergenic | 30.0% | |
| TTTAAGAAGATCTTCTCCAT+GGG | + | chr4.4:10702725-10702744 | None:intergenic | 30.0% | |
| ! | GATTTACACCACGTAAATTT+TGG | + | chr4.4:10703319-10703338 | None:intergenic | 30.0% |
| ! | TAGACAAGGTATGAATGTTT+TGG | - | chr4.4:10703758-10703777 | MS.gene28077:intron | 30.0% |
| ! | TGATTCTTCTCAAAAGCTTT+TGG | - | chr4.4:10703537-10703556 | MS.gene28077:intron | 30.0% |
| !! | AATATTTTGAGGAACTCCTT+AGG | - | chr4.4:10704128-10704147 | MS.gene28077:intron | 30.0% |
| !! | AGAACTTTCAAGTGATTTTG+AGG | - | chr4.4:10702756-10702775 | MS.gene28077:CDS | 30.0% |
| !! | GTCCATTCATATTGTTGTTT+CGG | - | chr4.4:10702593-10702612 | MS.gene28077:intron | 30.0% |
| !! | GTGACATATTTTTACAGGAT+GGG | - | chr4.4:10702615-10702634 | MS.gene28077:intron | 30.0% |
| !! | TGACATATTTTTACAGGATG+GGG | - | chr4.4:10702616-10702635 | MS.gene28077:intron | 30.0% |
| !! | TTTCGGTGACATATTTTTAC+AGG | - | chr4.4:10702610-10702629 | MS.gene28077:intron | 30.0% |
| !!! | CAACATTTTAGTTGCTTGAT+TGG | + | chr4.4:10703039-10703058 | None:intergenic | 30.0% |
| !!! | TCTAGTAAGAGCATTTTCAT+CGG | + | chr4.4:10704176-10704195 | None:intergenic | 30.0% |
| AAAAACGTCAGATCAAGACA+TGG | + | chr4.4:10703490-10703509 | None:intergenic | 35.0% | |
| AAAAATACACCCATCTTGGT+GGG | - | chr4.4:10703413-10703432 | MS.gene28077:intron | 35.0% | |
| AAGTGTCTTTGTCAATTGCA+CGG | + | chr4.4:10704276-10704295 | None:intergenic | 35.0% | |
| AAGTTTAAGGGTTTACCTTG+CGG | + | chr4.4:10703199-10703218 | None:intergenic | 35.0% | |
| AATTGTTCACTGTCTTCTGA+TGG | + | chr4.4:10702078-10702097 | None:intergenic | 35.0% | |
| ATAGGCAACATCTTCTTCAA+GGG | + | chr4.4:10703159-10703178 | None:intergenic | 35.0% | |
| ATCTCCACTTGAACTTCTTA+AGG | - | chr4.4:10703100-10703119 | MS.gene28077:intron | 35.0% | |
| ATTATTGAGGGCAGCAATTA+AGG | - | chr4.4:10704087-10704106 | MS.gene28077:intron | 35.0% | |
| ATTGCTTCATGAGAAGATTG+CGG | - | chr4.4:10703630-10703649 | MS.gene28077:CDS | 35.0% | |
| CAAAATTTCATCAGACAAGG+GGG | + | chr4.4:10703513-10703532 | None:intergenic | 35.0% | |
| CACCGAAACAACAATATGAA+TGG | + | chr4.4:10702598-10702617 | None:intergenic | 35.0% | |
| CTCAAAATATTTCTCAGGGT+AGG | + | chr4.4:10704119-10704138 | None:intergenic | 35.0% | |
| GAATAAGCAGTGCTCAAATA+AGG | - | chr4.4:10702512-10702531 | MS.gene28077:intron | 35.0% | |
| GATTCATCGTGATCATGATT+TGG | + | chr4.4:10702449-10702468 | None:intergenic | 35.0% | |
| GTTTGGGAATGTAATAGACA+AGG | - | chr4.4:10703744-10703763 | MS.gene28077:intron | 35.0% | |
| TGAAAATGCTCTTACTAGAG+TGG | - | chr4.4:10704177-10704196 | MS.gene28077:intron | 35.0% | |
| TGATCAGGATTGTAACAACA+AGG | - | chr4.4:10703677-10703696 | MS.gene28077:CDS | 35.0% | |
| TTATTGAGGGCAGCAATTAA+GGG | - | chr4.4:10704088-10704107 | MS.gene28077:intron | 35.0% | |
| TTCAAACAATTCGATCATCG+TGG | - | chr4.4:10703061-10703080 | MS.gene28077:intron | 35.0% | |
| TTCCAAAAATACACCCATCT+TGG | - | chr4.4:10703409-10703428 | MS.gene28077:intron | 35.0% | |
| TTGACATGAAACCTTAGTCA+AGG | + | chr4.4:10702922-10702941 | None:intergenic | 35.0% | |
| TTGACTAAGGTTTCATGTCA+AGG | - | chr4.4:10702921-10702940 | MS.gene28077:intron | 35.0% | |
| TTTGCCTTAAGAAGTTCAAG+TGG | + | chr4.4:10703107-10703126 | None:intergenic | 35.0% | |
| TTTGGACTACATGAAGAGAT+CGG | + | chr4.4:10702431-10702450 | None:intergenic | 35.0% | |
| ! | AAAATTCTCCTTGCACTGAT+GGG | - | chr4.4:10704310-10704329 | MS.gene28077:CDS | 35.0% |
| ! | CTACCCTGAGAAATATTTTG+AGG | - | chr4.4:10704117-10704136 | MS.gene28077:intron | 35.0% |
| ! | CTTTAAGAAGATCTTCTCCA+TGG | + | chr4.4:10702726-10702745 | None:intergenic | 35.0% |
| ! | TTGTTGTTACAATCCTGATC+AGG | + | chr4.4:10703678-10703697 | None:intergenic | 35.0% |
| !! | CTTCAAGGGACTTTTTGAAA+CGG | + | chr4.4:10703145-10703164 | None:intergenic | 35.0% |
| !! | GGTGACATATTTTTACAGGA+TGG | - | chr4.4:10702614-10702633 | MS.gene28077:intron | 35.0% |
| AAGTTCAAGTGGAGATCTTG+TGG | + | chr4.4:10703096-10703115 | None:intergenic | 40.0% | |
| ACAATCATGATGACCTGATC+AGG | - | chr4.4:10703662-10703681 | MS.gene28077:CDS | 40.0% | |
| ACCAACCAAACACGTAACAT+AGG | + | chr4.4:10702286-10702305 | None:intergenic | 40.0% | |
| AGATGAGGTGAACATGACAT+TGG | - | chr4.4:10703591-10703610 | MS.gene28077:intron | 40.0% | |
| AGTCAAAGAAATGGATCGGT+AGG | + | chr4.4:10702125-10702144 | None:intergenic | 40.0% | |
| CAAAAATACACCCATCTTGG+TGG | - | chr4.4:10703412-10703431 | MS.gene28077:intron | 40.0% | |
| GAAAATTCTCCTTGCACTGA+TGG | - | chr4.4:10704309-10704328 | MS.gene28077:CDS | 40.0% | |
| GATAGGCAACATCTTCTTCA+AGG | + | chr4.4:10703160-10703179 | None:intergenic | 40.0% | |
| GATGTTGCCTATCATACTTC+TGG | - | chr4.4:10703167-10703186 | MS.gene28077:intron | 40.0% | |
| GCAATTGACAAAGACACTTC+TGG | - | chr4.4:10704277-10704296 | MS.gene28077:CDS | 40.0% | |
| GCAGGATTTGGAAACTGATT+CGG | - | chr4.4:10704048-10704067 | MS.gene28077:intron | 40.0% | |
| TCATGAGAAGATTGCGGATA+AGG | - | chr4.4:10703636-10703655 | MS.gene28077:CDS | 40.0% | |
| TCCTATGTTACGTGTTTGGT+TGG | - | chr4.4:10702282-10702301 | MS.gene28077:CDS | 40.0% | |
| ! | AGGCTGGCTATAAACAAGAT+GGG | - | chr4.4:10704148-10704167 | MS.gene28077:intron | 40.0% |
| ! | AGGCTTGATAATATCGATCC+TGG | - | chr4.4:10702648-10702667 | MS.gene28077:CDS | 40.0% |
| ! | ATTAGATCTGCCCTTTTGCT+GGG | + | chr4.4:10703818-10703837 | None:intergenic | 40.0% |
| ! | CACCAAGATGGGTGTATTTT+TGG | + | chr4.4:10703414-10703433 | None:intergenic | 40.0% |
| ! | GATGTCACCAGAAGTATGAT+AGG | + | chr4.4:10703177-10703196 | None:intergenic | 40.0% |
| ! | TAGGCTGGCTATAAACAAGA+TGG | - | chr4.4:10704147-10704166 | MS.gene28077:intron | 40.0% |
| ! | TATTAGATCTGCCCTTTTGC+TGG | + | chr4.4:10703819-10703838 | None:intergenic | 40.0% |
| ! | TCTTGTTTATAGCCAGCCTA+AGG | + | chr4.4:10704147-10704166 | None:intergenic | 40.0% |
| !! | GGTTGATTTGCAGCGAATTA+CGG | - | chr4.4:10704216-10704235 | MS.gene28077:intron | 40.0% |
| !!! | AAAGCTTTTGGTTCCTCTTG+TGG | - | chr4.4:10703549-10703568 | MS.gene28077:intron | 40.0% |
| !!! | AAGCTTTTGGTTCCTCTTGT+GGG | - | chr4.4:10703550-10703569 | MS.gene28077:intron | 40.0% |
| GAAGACAGTGAACAATTGCG+CGG | - | chr4.4:10702081-10702100 | MS.gene28077:CDS | 45.0% | |
| GAGAAGAAACAGTGTTCCTC+TGG | - | chr4.4:10704249-10704268 | MS.gene28077:intron | 45.0% | |
| GCACTCCTATGTTACGTGTT+TGG | - | chr4.4:10702278-10702297 | MS.gene28077:CDS | 45.0% | |
| GGCTAAAAATGCATCACGCT+CGG | + | chr4.4:10703018-10703037 | None:intergenic | 45.0% | |
| TCACCTCATCTCCCTCATAA+CGG | + | chr4.4:10703582-10703601 | None:intergenic | 45.0% | |
| TCACTGTCTTCTGATGGAGA+AGG | + | chr4.4:10702072-10702091 | None:intergenic | 45.0% | |
| TCGAACTAACGTTGAGCTTC+TGG | - | chr4.4:10704023-10704042 | MS.gene28077:intron | 45.0% | |
| TTGCAACACTCCCAGCAAAA+GGG | - | chr4.4:10703805-10703824 | MS.gene28077:intron | 45.0% | |
| ! | GAGGAACACTGTTTCTTCTC+TGG | + | chr4.4:10704249-10704268 | None:intergenic | 45.0% |
| ! | TGATTTGCAGCGAATTACGG+AGG | - | chr4.4:10704219-10704238 | MS.gene28077:intron | 45.0% |
| !! | TTTTGAGGAACTCCTTAGGC+TGG | - | chr4.4:10704132-10704151 | MS.gene28077:intron | 45.0% |
| !!! | ATTTTTATTATTATTACTTT+TGG | - | chr4.4:10702196-10702215 | MS.gene28077:CDS | 5.0% |
| AAAAATGCATCACGCTCGGC+CGG | + | chr4.4:10703014-10703033 | None:intergenic | 50.0% | |
| AATACACCCATCTTGGTGGG+TGG | - | chr4.4:10703416-10703435 | MS.gene28077:intron | 50.0% | |
| ACACCGTTATGAGGGAGATG+AGG | - | chr4.4:10703576-10703595 | MS.gene28077:intron | 50.0% | |
| ACAGGATGGGGAACGAATGA+AGG | - | chr4.4:10702628-10702647 | MS.gene28077:CDS | 50.0% | |
| AGTGGTGACAACTAGAGCTG+AGG | - | chr4.4:10704195-10704214 | MS.gene28077:intron | 50.0% | |
| ATGGAGAAGGAACGTGAGAG+GGG | + | chr4.4:10702059-10702078 | None:intergenic | 50.0% | |
| CATCATGTCCCATCAGTGCA+AGG | + | chr4.4:10704321-10704340 | None:intergenic | 50.0% | |
| GAAACTTACACGCAGACCCA+TGG | - | chr4.4:10702706-10702725 | MS.gene28077:CDS | 50.0% | |
| GAGCTGCATTTCTATGAGCC+AGG | + | chr4.4:10702669-10702688 | None:intergenic | 50.0% | |
| GATGGAGAAGGAACGTGAGA+GGG | + | chr4.4:10702060-10702079 | None:intergenic | 50.0% | |
| GTGGGCATACACCGTTATGA+GGG | - | chr4.4:10703568-10703587 | MS.gene28077:intron | 50.0% | |
| GTTGCAACACTCCCAGCAAA+AGG | - | chr4.4:10703804-10703823 | MS.gene28077:intron | 50.0% | |
| TAACGGTGTATGCCCACAAG+AGG | + | chr4.4:10703565-10703584 | None:intergenic | 50.0% | |
| TACTTCTGGTGACATCCGCA+AGG | - | chr4.4:10703181-10703200 | MS.gene28077:intron | 50.0% | |
| TGATGGAGAAGGAACGTGAG+AGG | + | chr4.4:10702061-10702080 | None:intergenic | 50.0% | |
| TGTGGGCATACACCGTTATG+AGG | - | chr4.4:10703567-10703586 | MS.gene28077:intron | 50.0% | |
| TTGTCAATTGCACGGTCCAG+AGG | + | chr4.4:10704268-10704287 | None:intergenic | 50.0% | |
| ! | AACAGAAAGCTGTGCTGCTG+TGG | - | chr4.4:10702979-10702998 | MS.gene28077:intron | 50.0% |
| ! | CAATTGCGCGGTGCTTTTCA+AGG | - | chr4.4:10702093-10702112 | MS.gene28077:CDS | 50.0% |
| GCTGCTGTGGACATTGGATC+CGG | - | chr4.4:10702992-10703011 | MS.gene28077:intron | 55.0% | |
| GGCTATCCACCCACCAAGAT+GGG | + | chr4.4:10703425-10703444 | None:intergenic | 55.0% | |
| GGGTCTGCGTGTAAGTTTCG+CGG | + | chr4.4:10702705-10702724 | None:intergenic | 55.0% | |
| TGGCTATCCACCCACCAAGA+TGG | + | chr4.4:10703426-10703445 | None:intergenic | 55.0% | |
| ! | AACGTTGAGCTTCTGGCTGC+AGG | - | chr4.4:10704030-10704049 | MS.gene28077:intron | 55.0% |
| ! | AGCTGTGCTGCTGTGGACAT+TGG | - | chr4.4:10702986-10703005 | MS.gene28077:intron | 55.0% |
| ! | GAGCTTCTGGCTGCAGGATT+TGG | - | chr4.4:10704036-10704055 | MS.gene28077:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10702039 | 10704345 | 10702039 | ID=MS.gene28077 |
| chr4.4 | mRNA | 10702039 | 10704345 | 10702039 | ID=MS.gene28077.t1;Parent=MS.gene28077 |
| chr4.4 | exon | 10704270 | 10704345 | 10704270 | ID=MS.gene28077.t1.exon1;Parent=MS.gene28077.t1 |
| chr4.4 | CDS | 10704270 | 10704345 | 10704270 | ID=cds.MS.gene28077.t1;Parent=MS.gene28077.t1 |
| chr4.4 | exon | 10703607 | 10703752 | 10703607 | ID=MS.gene28077.t1.exon2;Parent=MS.gene28077.t1 |
| chr4.4 | CDS | 10703607 | 10703752 | 10703607 | ID=cds.MS.gene28077.t1;Parent=MS.gene28077.t1 |
| chr4.4 | exon | 10703182 | 10703400 | 10703182 | ID=MS.gene28077.t1.exon3;Parent=MS.gene28077.t1 |
| chr4.4 | CDS | 10703182 | 10703400 | 10703182 | ID=cds.MS.gene28077.t1;Parent=MS.gene28077.t1 |
| chr4.4 | exon | 10702619 | 10702831 | 10702619 | ID=MS.gene28077.t1.exon4;Parent=MS.gene28077.t1 |
| chr4.4 | CDS | 10702619 | 10702831 | 10702619 | ID=cds.MS.gene28077.t1;Parent=MS.gene28077.t1 |
| chr4.4 | exon | 10702039 | 10702332 | 10702039 | ID=MS.gene28077.t1.exon5;Parent=MS.gene28077.t1 |
| chr4.4 | CDS | 10702039 | 10702332 | 10702039 | ID=cds.MS.gene28077.t1;Parent=MS.gene28077.t1 |
| Gene Sequence |
| Protein sequence |
