Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028423.t1 | XP_004504777.1 | 92.8 | 417 | 30 | 0 | 1 | 417 | 1 | 417 | 1.60E-210 | 741.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028423.t1 | Q9C5U3 | 87.8 | 419 | 49 | 1 | 1 | 417 | 1 | 419 | 2.5e-199 | 696.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028423.t1 | A0A072UQA3 | 99.0 | 417 | 4 | 0 | 1 | 417 | 1 | 417 | 1.2e-210 | 741.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028423.t1 | MTR_4g094270 | 99.520 | 417 | 2 | 0 | 1 | 417 | 1 | 417 | 0.0 | 851 |
MS.gene028423.t1 | MTR_7g099640 | 48.556 | 381 | 185 | 4 | 30 | 407 | 65 | 437 | 1.12e-114 | 343 |
MS.gene028423.t1 | MTR_1g095660 | 52.125 | 353 | 152 | 6 | 61 | 403 | 25 | 370 | 1.88e-114 | 340 |
MS.gene028423.t1 | MTR_1g069105 | 52.000 | 325 | 155 | 1 | 83 | 407 | 115 | 438 | 6.03e-114 | 341 |
MS.gene028423.t1 | MTR_3g112260 | 48.603 | 358 | 169 | 2 | 58 | 401 | 24 | 380 | 9.84e-112 | 333 |
MS.gene028423.t1 | MTR_3g117230 | 47.253 | 364 | 184 | 2 | 45 | 401 | 21 | 383 | 4.25e-111 | 332 |
MS.gene028423.t1 | MTR_7g099640 | 48.209 | 363 | 177 | 4 | 30 | 389 | 65 | 419 | 3.79e-109 | 328 |
MS.gene028423.t1 | MTR_1g083330 | 52.740 | 292 | 137 | 1 | 113 | 404 | 124 | 414 | 4.38e-106 | 320 |
MS.gene028423.t1 | MTR_4g033235 | 52.740 | 292 | 137 | 1 | 113 | 404 | 125 | 415 | 5.32e-106 | 320 |
MS.gene028423.t1 | MTR_3g062510 | 46.866 | 335 | 177 | 1 | 70 | 404 | 73 | 406 | 2.71e-104 | 315 |
MS.gene028423.t1 | MTR_8g023550 | 49.568 | 347 | 149 | 5 | 61 | 403 | 72 | 396 | 2.94e-104 | 315 |
MS.gene028423.t1 | MTR_1g069105 | 52.490 | 261 | 123 | 1 | 83 | 343 | 115 | 374 | 5.13e-91 | 280 |
MS.gene028423.t1 | MTR_3g062510 | 49.632 | 272 | 136 | 1 | 70 | 341 | 73 | 343 | 8.84e-89 | 274 |
MS.gene028423.t1 | MTR_6g059690 | 41.797 | 256 | 146 | 2 | 161 | 414 | 202 | 456 | 2.90e-61 | 210 |
MS.gene028423.t1 | MTR_1g063380 | 44.915 | 236 | 126 | 2 | 158 | 393 | 207 | 438 | 3.15e-61 | 212 |
MS.gene028423.t1 | MTR_1g063380 | 35.905 | 337 | 202 | 7 | 52 | 384 | 379 | 705 | 6.38e-61 | 211 |
MS.gene028423.t1 | MTR_7g101870 | 34.043 | 376 | 221 | 8 | 52 | 410 | 380 | 745 | 3.45e-61 | 212 |
MS.gene028423.t1 | MTR_7g101870 | 44.068 | 236 | 128 | 2 | 158 | 393 | 208 | 439 | 5.99e-60 | 208 |
MS.gene028423.t1 | MTR_7g088850 | 41.870 | 246 | 142 | 1 | 139 | 384 | 265 | 509 | 5.71e-61 | 207 |
MS.gene028423.t1 | MTR_7g088850 | 28.279 | 244 | 160 | 6 | 149 | 383 | 4 | 241 | 2.91e-20 | 93.2 |
MS.gene028423.t1 | MTR_4g094662 | 42.276 | 246 | 140 | 2 | 157 | 402 | 230 | 473 | 6.88e-61 | 209 |
MS.gene028423.t1 | MTR_2g095210 | 40.873 | 252 | 147 | 2 | 133 | 384 | 384 | 633 | 1.84e-60 | 209 |
MS.gene028423.t1 | MTR_2g095210 | 48.315 | 89 | 46 | 0 | 151 | 239 | 202 | 290 | 1.24e-22 | 100 |
MS.gene028423.t1 | MTR_2g095210 | 38.750 | 80 | 49 | 0 | 314 | 393 | 287 | 366 | 5.40e-11 | 65.1 |
MS.gene028423.t1 | MTR_3g115110 | 40.304 | 263 | 153 | 3 | 149 | 409 | 240 | 500 | 3.03e-60 | 208 |
MS.gene028423.t1 | MTR_2g438140 | 41.463 | 246 | 142 | 2 | 157 | 402 | 227 | 470 | 6.93e-60 | 206 |
MS.gene028423.t1 | MTR_2g438140 | 41.463 | 246 | 142 | 2 | 157 | 402 | 287 | 530 | 1.40e-59 | 205 |
MS.gene028423.t1 | MTR_7g010800 | 40.625 | 256 | 148 | 3 | 149 | 402 | 197 | 450 | 1.69e-59 | 205 |
MS.gene028423.t1 | MTR_7g078570 | 35.913 | 323 | 182 | 5 | 114 | 414 | 132 | 451 | 1.64e-58 | 202 |
MS.gene028423.t1 | MTR_7g096060 | 40.684 | 263 | 141 | 3 | 161 | 415 | 245 | 500 | 9.55e-58 | 201 |
MS.gene028423.t1 | MTR_8g099605 | 40.637 | 251 | 141 | 2 | 158 | 401 | 165 | 414 | 2.79e-57 | 199 |
MS.gene028423.t1 | MTR_8g099605 | 40.637 | 251 | 141 | 2 | 158 | 401 | 406 | 655 | 1.28e-56 | 200 |
MS.gene028423.t1 | MTR_0376s0020 | 41.473 | 258 | 146 | 4 | 161 | 416 | 6 | 260 | 2.51e-56 | 194 |
MS.gene028423.t1 | MTR_7g088980 | 42.276 | 246 | 141 | 1 | 139 | 384 | 119 | 363 | 1.32e-55 | 189 |
MS.gene028423.t1 | MTR_2g095320 | 41.975 | 243 | 133 | 3 | 151 | 393 | 148 | 382 | 2.14e-55 | 195 |
MS.gene028423.t1 | MTR_2g095320 | 39.224 | 232 | 127 | 3 | 153 | 384 | 418 | 635 | 5.79e-49 | 177 |
MS.gene028423.t1 | MTR_7g088980 | 42.276 | 246 | 141 | 1 | 139 | 384 | 201 | 445 | 1.16e-54 | 189 |
MS.gene028423.t1 | MTR_7g088980 | 33.129 | 163 | 100 | 4 | 219 | 377 | 14 | 171 | 1.10e-15 | 79.3 |
MS.gene028423.t1 | MTR_7g088980 | 42.276 | 246 | 141 | 1 | 139 | 384 | 269 | 513 | 3.36e-54 | 189 |
MS.gene028423.t1 | MTR_7g088980 | 35.242 | 227 | 132 | 5 | 159 | 377 | 20 | 239 | 1.15e-31 | 127 |
MS.gene028423.t1 | MTR_5g069780 | 40.385 | 260 | 148 | 3 | 151 | 404 | 308 | 566 | 4.05e-54 | 192 |
MS.gene028423.t1 | MTR_7g088980 | 42.276 | 246 | 141 | 1 | 139 | 384 | 295 | 539 | 4.15e-54 | 189 |
MS.gene028423.t1 | MTR_7g088980 | 35.979 | 189 | 114 | 3 | 193 | 377 | 80 | 265 | 6.27e-27 | 113 |
MS.gene028423.t1 | MTR_4g064350 | 39.453 | 256 | 152 | 2 | 161 | 414 | 325 | 579 | 1.89e-53 | 191 |
MS.gene028423.t1 | MTR_3g462930 | 40.157 | 254 | 145 | 3 | 157 | 404 | 305 | 557 | 6.79e-53 | 189 |
MS.gene028423.t1 | MTR_7g089040 | 39.163 | 263 | 156 | 2 | 152 | 412 | 681 | 941 | 4.85e-51 | 184 |
MS.gene028423.t1 | MTR_7g089040 | 33.036 | 224 | 143 | 3 | 161 | 383 | 391 | 608 | 1.05e-31 | 128 |
MS.gene028423.t1 | MTR_7g088830 | 38.403 | 263 | 158 | 2 | 152 | 412 | 654 | 914 | 5.27e-51 | 184 |
MS.gene028423.t1 | MTR_7g088830 | 35.981 | 214 | 120 | 5 | 195 | 397 | 432 | 639 | 4.13e-30 | 123 |
MS.gene028423.t1 | MTR_2g101290 | 38.866 | 247 | 145 | 3 | 150 | 394 | 409 | 651 | 1.12e-50 | 182 |
MS.gene028423.t1 | MTR_2g101290 | 38.866 | 247 | 145 | 3 | 150 | 394 | 409 | 651 | 2.07e-50 | 182 |
MS.gene028423.t1 | MTR_4g067100 | 39.921 | 253 | 140 | 5 | 157 | 401 | 381 | 629 | 2.54e-50 | 183 |
MS.gene028423.t1 | MTR_4g067100 | 39.921 | 253 | 140 | 5 | 157 | 401 | 381 | 629 | 2.79e-50 | 183 |
MS.gene028423.t1 | MTR_1g028390 | 38.976 | 254 | 149 | 2 | 157 | 410 | 330 | 577 | 1.65e-48 | 176 |
MS.gene028423.t1 | MTR_6g016600 | 37.918 | 269 | 146 | 5 | 158 | 417 | 319 | 575 | 4.33e-48 | 173 |
MS.gene028423.t1 | MTR_3g104470 | 38.866 | 247 | 146 | 2 | 156 | 402 | 224 | 465 | 5.41e-48 | 174 |
MS.gene028423.t1 | MTR_3g096000 | 42.489 | 233 | 128 | 3 | 157 | 384 | 297 | 528 | 8.19e-48 | 175 |
MS.gene028423.t1 | MTR_4g011810 | 36.054 | 294 | 154 | 7 | 150 | 416 | 236 | 522 | 1.34e-47 | 171 |
MS.gene028423.t1 | MTR_3g104480 | 39.669 | 242 | 141 | 2 | 161 | 402 | 227 | 463 | 7.10e-47 | 171 |
MS.gene028423.t1 | MTR_7g089290 | 37.903 | 248 | 148 | 5 | 148 | 392 | 659 | 903 | 7.55e-47 | 172 |
MS.gene028423.t1 | MTR_7g089290 | 37.903 | 248 | 148 | 5 | 148 | 392 | 631 | 875 | 8.55e-47 | 172 |
MS.gene028423.t1 | MTR_4g053350 | 40.650 | 246 | 133 | 8 | 139 | 380 | 110 | 346 | 7.22e-46 | 164 |
MS.gene028423.t1 | MTR_2g078630 | 39.224 | 232 | 131 | 4 | 158 | 383 | 68 | 295 | 7.58e-46 | 170 |
MS.gene028423.t1 | MTR_4g053350 | 40.650 | 246 | 133 | 8 | 139 | 380 | 110 | 346 | 7.62e-46 | 164 |
MS.gene028423.t1 | MTR_2g078630 | 39.224 | 232 | 131 | 4 | 158 | 383 | 596 | 823 | 1.70e-45 | 169 |
MS.gene028423.t1 | MTR_5g075340 | 38.000 | 250 | 146 | 3 | 155 | 402 | 228 | 470 | 2.37e-45 | 168 |
MS.gene028423.t1 | MTR_2g007010 | 34.962 | 266 | 164 | 3 | 122 | 385 | 497 | 755 | 2.80e-44 | 164 |
MS.gene028423.t1 | MTR_2g007010 | 37.959 | 245 | 129 | 5 | 161 | 392 | 243 | 477 | 5.01e-39 | 149 |
MS.gene028423.t1 | MTR_2g086160 | 39.744 | 234 | 128 | 8 | 145 | 374 | 121 | 345 | 4.12e-44 | 157 |
MS.gene028423.t1 | MTR_2g086160 | 39.167 | 240 | 133 | 8 | 145 | 380 | 121 | 351 | 1.01e-43 | 158 |
MS.gene028423.t1 | MTR_4g096870 | 37.344 | 241 | 143 | 5 | 154 | 392 | 117 | 351 | 5.75e-43 | 155 |
MS.gene028423.t1 | MTR_5g009840 | 38.095 | 231 | 134 | 5 | 157 | 384 | 517 | 741 | 7.04e-43 | 160 |
MS.gene028423.t1 | MTR_7g075520 | 37.200 | 250 | 145 | 6 | 139 | 384 | 195 | 436 | 8.80e-43 | 157 |
MS.gene028423.t1 | MTR_3g092070 | 38.889 | 234 | 132 | 5 | 155 | 384 | 80 | 306 | 2.56e-42 | 152 |
MS.gene028423.t1 | MTR_3g092070 | 38.889 | 234 | 132 | 5 | 155 | 384 | 80 | 306 | 5.42e-42 | 152 |
MS.gene028423.t1 | MTR_5g075360 | 36.290 | 248 | 153 | 3 | 163 | 410 | 23 | 265 | 7.96e-42 | 154 |
MS.gene028423.t1 | MTR_5g075360 | 36.290 | 248 | 153 | 3 | 163 | 410 | 73 | 315 | 1.81e-41 | 154 |
MS.gene028423.t1 | MTR_1g101870 | 40.260 | 231 | 129 | 5 | 157 | 384 | 558 | 782 | 2.06e-41 | 156 |
MS.gene028423.t1 | MTR_1g101870 | 40.260 | 231 | 129 | 5 | 157 | 384 | 506 | 730 | 2.30e-41 | 156 |
MS.gene028423.t1 | MTR_5g075360 | 36.290 | 248 | 153 | 3 | 163 | 410 | 199 | 441 | 6.89e-41 | 154 |
MS.gene028423.t1 | MTR_5g075360 | 36.290 | 248 | 153 | 3 | 163 | 410 | 249 | 491 | 9.33e-41 | 154 |
MS.gene028423.t1 | MTR_3g023900 | 34.680 | 297 | 163 | 5 | 141 | 410 | 516 | 808 | 9.91e-41 | 154 |
MS.gene028423.t1 | MTR_3g023900 | 38.222 | 225 | 131 | 3 | 166 | 382 | 242 | 466 | 4.46e-39 | 149 |
MS.gene028423.t1 | MTR_8g099065 | 36.910 | 233 | 138 | 5 | 155 | 384 | 533 | 759 | 9.99e-41 | 154 |
MS.gene028423.t1 | MTR_1g088750 | 39.224 | 232 | 131 | 5 | 157 | 384 | 939 | 1164 | 1.13e-40 | 155 |
MS.gene028423.t1 | MTR_1g088750 | 39.224 | 232 | 131 | 5 | 157 | 384 | 890 | 1115 | 1.14e-40 | 154 |
MS.gene028423.t1 | MTR_3g023890 | 35.017 | 297 | 158 | 5 | 141 | 407 | 370 | 661 | 1.19e-40 | 153 |
MS.gene028423.t1 | MTR_3g023890 | 38.222 | 225 | 121 | 7 | 159 | 373 | 96 | 312 | 1.12e-34 | 136 |
MS.gene028423.t1 | MTR_1g099470 | 38.095 | 231 | 133 | 5 | 157 | 384 | 435 | 658 | 2.33e-40 | 153 |
MS.gene028423.t1 | MTR_3g089100 | 38.938 | 226 | 128 | 5 | 157 | 378 | 932 | 1151 | 1.33e-39 | 151 |
MS.gene028423.t1 | MTR_3g089100 | 38.938 | 226 | 128 | 5 | 157 | 378 | 898 | 1117 | 1.34e-39 | 151 |
MS.gene028423.t1 | MTR_3g089100 | 38.938 | 226 | 128 | 5 | 157 | 378 | 903 | 1122 | 1.42e-39 | 151 |
MS.gene028423.t1 | MTR_3g092080 | 38.034 | 234 | 134 | 5 | 155 | 384 | 83 | 309 | 2.51e-39 | 144 |
MS.gene028423.t1 | MTR_3g092080 | 38.034 | 234 | 134 | 5 | 155 | 384 | 83 | 309 | 4.23e-39 | 145 |
MS.gene028423.t1 | MTR_1g088730 | 36.638 | 232 | 137 | 5 | 157 | 384 | 933 | 1158 | 1.03e-38 | 149 |
MS.gene028423.t1 | MTR_6g033740 | 37.931 | 232 | 132 | 7 | 157 | 384 | 501 | 724 | 2.18e-38 | 147 |
MS.gene028423.t1 | MTR_1g099480 | 37.288 | 236 | 129 | 6 | 157 | 384 | 469 | 693 | 5.05e-37 | 144 |
MS.gene028423.t1 | MTR_6g023855 | 35.496 | 262 | 146 | 9 | 133 | 384 | 224 | 472 | 9.78e-37 | 140 |
MS.gene028423.t1 | MTR_4g088885 | 35.424 | 271 | 142 | 7 | 161 | 402 | 227 | 493 | 1.32e-36 | 142 |
MS.gene028423.t1 | MTR_6g023875 | 31.597 | 288 | 166 | 9 | 150 | 416 | 376 | 653 | 3.11e-36 | 140 |
MS.gene028423.t1 | MTR_3g104490 | 30.838 | 334 | 188 | 7 | 70 | 402 | 135 | 426 | 3.64e-36 | 140 |
MS.gene028423.t1 | MTR_8g469460 | 31.138 | 334 | 179 | 8 | 70 | 402 | 135 | 418 | 1.90e-35 | 138 |
MS.gene028423.t1 | MTR_1g044600 | 39.267 | 191 | 114 | 1 | 226 | 414 | 197 | 387 | 3.04e-35 | 136 |
MS.gene028423.t1 | MTR_7g088980 | 35.366 | 246 | 115 | 2 | 139 | 384 | 269 | 470 | 1.57e-34 | 134 |
MS.gene028423.t1 | MTR_7g088980 | 35.242 | 227 | 132 | 5 | 159 | 377 | 20 | 239 | 6.17e-32 | 127 |
MS.gene028423.t1 | MTR_7g088980 | 35.366 | 246 | 115 | 2 | 139 | 384 | 295 | 496 | 1.90e-34 | 134 |
MS.gene028423.t1 | MTR_7g088980 | 35.979 | 189 | 114 | 3 | 193 | 377 | 80 | 265 | 5.19e-27 | 113 |
MS.gene028423.t1 | MTR_5g074850 | 35.223 | 247 | 143 | 6 | 161 | 397 | 503 | 742 | 2.73e-33 | 132 |
MS.gene028423.t1 | MTR_4g074920 | 33.913 | 230 | 126 | 5 | 158 | 384 | 671 | 877 | 2.05e-32 | 130 |
MS.gene028423.t1 | MTR_1g099480 | 41.212 | 165 | 91 | 3 | 157 | 318 | 469 | 630 | 6.15e-31 | 125 |
MS.gene028423.t1 | MTR_8g056860 | 31.276 | 243 | 148 | 4 | 179 | 412 | 492 | 724 | 1.19e-30 | 125 |
MS.gene028423.t1 | MTR_6g023865 | 32.400 | 250 | 150 | 7 | 150 | 384 | 152 | 397 | 1.20e-30 | 123 |
MS.gene028423.t1 | MTR_8g099065 | 38.506 | 174 | 98 | 5 | 155 | 325 | 533 | 700 | 1.46e-30 | 124 |
MS.gene028423.t1 | MTR_2g024440 | 31.897 | 232 | 136 | 7 | 157 | 377 | 215 | 435 | 3.90e-30 | 122 |
MS.gene028423.t1 | MTR_2g024440 | 31.897 | 232 | 136 | 7 | 157 | 377 | 297 | 517 | 7.82e-30 | 122 |
MS.gene028423.t1 | MTR_2g024440 | 31.897 | 232 | 136 | 7 | 157 | 377 | 298 | 518 | 8.09e-30 | 121 |
MS.gene028423.t1 | MTR_1g080430 | 34.711 | 242 | 145 | 8 | 141 | 373 | 659 | 896 | 2.57e-28 | 118 |
MS.gene028423.t1 | MTR_1g080430 | 34.711 | 242 | 145 | 8 | 141 | 373 | 659 | 896 | 3.36e-28 | 117 |
MS.gene028423.t1 | MTR_4g112600 | 62.338 | 77 | 28 | 1 | 161 | 236 | 5 | 81 | 1.17e-26 | 102 |
MS.gene028423.t1 | MTR_4g083460 | 37.158 | 183 | 91 | 5 | 156 | 319 | 837 | 1014 | 1.26e-21 | 98.2 |
MS.gene028423.t1 | MTR_4g083460 | 28.509 | 228 | 131 | 6 | 185 | 394 | 580 | 793 | 5.82e-11 | 65.1 |
MS.gene028423.t1 | MTR_8g076920 | 33.520 | 179 | 99 | 7 | 156 | 326 | 222 | 388 | 1.28e-14 | 75.9 |
MS.gene028423.t1 | MTR_6g005760 | 35.099 | 151 | 89 | 5 | 194 | 343 | 236 | 378 | 1.34e-14 | 75.9 |
MS.gene028423.t1 | MTR_6g005760 | 35.099 | 151 | 89 | 5 | 194 | 343 | 364 | 506 | 1.43e-14 | 75.9 |
MS.gene028423.t1 | MTR_3g076930 | 30.000 | 170 | 101 | 4 | 196 | 351 | 199 | 364 | 1.70e-13 | 72.4 |
MS.gene028423.t1 | MTR_5g020980 | 33.125 | 160 | 95 | 5 | 171 | 326 | 229 | 380 | 3.80e-13 | 71.2 |
MS.gene028423.t1 | MTR_5g020530 | 35.417 | 144 | 84 | 5 | 194 | 336 | 389 | 524 | 3.82e-13 | 71.6 |
MS.gene028423.t1 | MTR_2g076840 | 28.814 | 177 | 110 | 6 | 163 | 332 | 477 | 644 | 4.93e-13 | 71.2 |
MS.gene028423.t1 | MTR_2g076840 | 28.022 | 182 | 115 | 5 | 157 | 332 | 196 | 367 | 2.33e-11 | 66.2 |
MS.gene028423.t1 | MTR_4g077880 | 33.113 | 151 | 92 | 5 | 194 | 343 | 370 | 512 | 8.72e-13 | 70.5 |
MS.gene028423.t1 | MTR_2g076690 | 29.609 | 179 | 105 | 7 | 163 | 332 | 210 | 376 | 1.41e-12 | 69.3 |
MS.gene028423.t1 | MTR_2g076970 | 28.571 | 175 | 112 | 6 | 163 | 332 | 203 | 369 | 4.86e-12 | 67.8 |
MS.gene028423.t1 | MTR_2g076710 | 32.468 | 154 | 90 | 5 | 183 | 332 | 236 | 379 | 4.98e-12 | 67.8 |
MS.gene028423.t1 | MTR_3g115110 | 50.000 | 68 | 31 | 2 | 149 | 214 | 240 | 306 | 9.75e-12 | 67.0 |
MS.gene028423.t1 | MTR_6g042290 | 29.016 | 193 | 113 | 7 | 163 | 341 | 215 | 397 | 3.09e-11 | 65.5 |
MS.gene028423.t1 | MTR_2g076920 | 30.000 | 160 | 96 | 6 | 179 | 332 | 220 | 369 | 3.61e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028423.t1 | AT5G19990 | 94.033 | 419 | 23 | 1 | 1 | 417 | 1 | 419 | 0.0 | 798 |
MS.gene028423.t1 | AT5G19990 | 94.033 | 419 | 23 | 1 | 1 | 417 | 1 | 419 | 0.0 | 798 |
MS.gene028423.t1 | AT5G20000 | 93.079 | 419 | 27 | 1 | 1 | 417 | 1 | 419 | 0.0 | 790 |
MS.gene028423.t1 | AT5G19990 | 98.864 | 352 | 4 | 0 | 66 | 417 | 10 | 361 | 0.0 | 710 |
MS.gene028423.t1 | AT1G53750 | 53.602 | 347 | 150 | 4 | 61 | 403 | 72 | 411 | 6.11e-120 | 355 |
MS.gene028423.t1 | AT2G20140 | 47.090 | 378 | 195 | 2 | 30 | 407 | 63 | 435 | 2.36e-114 | 342 |
MS.gene028423.t1 | AT4G29040 | 47.090 | 378 | 195 | 2 | 30 | 407 | 63 | 435 | 4.99e-114 | 341 |
MS.gene028423.t1 | AT5G43010 | 49.441 | 358 | 166 | 2 | 58 | 401 | 24 | 380 | 7.63e-114 | 339 |
MS.gene028423.t1 | AT1G53780 | 52.738 | 347 | 153 | 3 | 61 | 403 | 244 | 583 | 2.61e-113 | 344 |
MS.gene028423.t1 | AT1G53780 | 52.738 | 347 | 153 | 3 | 61 | 403 | 244 | 583 | 2.61e-113 | 344 |
MS.gene028423.t1 | AT1G53780 | 52.738 | 347 | 153 | 3 | 61 | 403 | 243 | 582 | 2.65e-113 | 344 |
MS.gene028423.t1 | AT1G53780 | 52.738 | 347 | 153 | 3 | 61 | 403 | 265 | 604 | 6.23e-113 | 344 |
MS.gene028423.t1 | AT1G45000 | 49.296 | 355 | 165 | 2 | 61 | 401 | 27 | 380 | 2.23e-112 | 335 |
MS.gene028423.t1 | AT1G09100 | 52.740 | 292 | 137 | 1 | 113 | 404 | 124 | 414 | 2.70e-106 | 320 |
MS.gene028423.t1 | AT3G05530 | 52.740 | 292 | 137 | 1 | 113 | 404 | 125 | 415 | 1.26e-105 | 319 |
MS.gene028423.t1 | AT5G58290 | 44.444 | 378 | 196 | 3 | 31 | 407 | 39 | 403 | 7.17e-105 | 317 |
MS.gene028423.t1 | AT1G45000 | 47.036 | 253 | 119 | 2 | 61 | 299 | 27 | 278 | 1.43e-71 | 228 |
MS.gene028423.t1 | AT1G06430 | 42.683 | 246 | 139 | 2 | 157 | 402 | 218 | 461 | 9.86e-63 | 214 |
MS.gene028423.t1 | AT1G06430 | 42.683 | 246 | 139 | 2 | 157 | 402 | 218 | 461 | 9.86e-63 | 214 |
MS.gene028423.t1 | AT1G06430 | 42.683 | 246 | 139 | 2 | 157 | 402 | 218 | 461 | 9.86e-63 | 214 |
MS.gene028423.t1 | AT2G30950 | 42.276 | 246 | 140 | 2 | 157 | 402 | 225 | 468 | 5.55e-62 | 213 |
MS.gene028423.t1 | AT2G30950 | 42.276 | 246 | 140 | 2 | 157 | 402 | 225 | 468 | 5.55e-62 | 213 |
MS.gene028423.t1 | AT2G30950 | 42.276 | 246 | 140 | 2 | 157 | 402 | 225 | 468 | 5.55e-62 | 213 |
MS.gene028423.t1 | AT2G30950 | 42.276 | 246 | 140 | 2 | 157 | 402 | 229 | 472 | 7.09e-62 | 212 |
MS.gene028423.t1 | AT3G09840 | 43.621 | 243 | 133 | 2 | 151 | 393 | 199 | 437 | 1.63e-61 | 213 |
MS.gene028423.t1 | AT3G09840 | 42.128 | 235 | 136 | 0 | 150 | 384 | 471 | 705 | 1.36e-59 | 207 |
MS.gene028423.t1 | AT5G03340 | 43.210 | 243 | 134 | 2 | 151 | 393 | 199 | 437 | 1.31e-60 | 210 |
MS.gene028423.t1 | AT5G03340 | 42.128 | 235 | 135 | 1 | 150 | 384 | 471 | 704 | 1.40e-60 | 210 |
MS.gene028423.t1 | AT3G53230 | 36.012 | 336 | 203 | 6 | 52 | 384 | 379 | 705 | 1.84e-60 | 210 |
MS.gene028423.t1 | AT3G53230 | 41.870 | 246 | 139 | 2 | 151 | 396 | 200 | 441 | 3.20e-59 | 207 |
MS.gene028423.t1 | AT5G42270 | 39.924 | 263 | 154 | 3 | 149 | 409 | 238 | 498 | 2.18e-60 | 208 |
MS.gene028423.t1 | AT1G50250 | 39.544 | 263 | 155 | 3 | 149 | 409 | 250 | 510 | 2.20e-59 | 206 |
MS.gene028423.t1 | AT5G15250 | 39.837 | 246 | 146 | 2 | 157 | 402 | 222 | 465 | 3.16e-57 | 199 |
MS.gene028423.t1 | AT2G03670 | 41.463 | 246 | 144 | 0 | 139 | 384 | 266 | 511 | 1.49e-56 | 196 |
MS.gene028423.t1 | AT2G03670 | 36.214 | 243 | 147 | 3 | 161 | 397 | 24 | 264 | 3.05e-44 | 162 |
MS.gene028423.t1 | AT5G58870 | 40.541 | 259 | 151 | 2 | 157 | 413 | 327 | 584 | 2.32e-55 | 196 |
MS.gene028423.t1 | AT4G23940 | 39.768 | 259 | 148 | 2 | 161 | 412 | 432 | 689 | 3.98e-55 | 196 |
MS.gene028423.t1 | AT1G07510 | 40.467 | 257 | 150 | 2 | 161 | 415 | 329 | 584 | 4.43e-55 | 195 |
MS.gene028423.t1 | AT5G15250 | 37.175 | 269 | 144 | 4 | 157 | 402 | 222 | 488 | 6.17e-55 | 190 |
MS.gene028423.t1 | AT3G56690 | 41.870 | 246 | 141 | 1 | 139 | 384 | 704 | 947 | 6.38e-55 | 196 |
MS.gene028423.t1 | AT3G56690 | 38.393 | 224 | 132 | 3 | 161 | 383 | 387 | 605 | 4.39e-42 | 159 |
MS.gene028423.t1 | AT3G47060 | 39.382 | 259 | 154 | 2 | 157 | 413 | 323 | 580 | 2.65e-54 | 193 |
MS.gene028423.t1 | AT2G29080 | 42.412 | 257 | 144 | 3 | 161 | 415 | 324 | 578 | 6.81e-52 | 186 |
MS.gene028423.t1 | AT3G16290 | 38.800 | 250 | 147 | 3 | 150 | 397 | 401 | 646 | 3.29e-50 | 182 |
MS.gene028423.t1 | AT1G05910 | 39.044 | 251 | 141 | 4 | 155 | 398 | 377 | 622 | 4.20e-50 | 182 |
MS.gene028423.t1 | AT5G64580 | 40.329 | 243 | 137 | 4 | 157 | 393 | 314 | 554 | 8.12e-50 | 181 |
MS.gene028423.t1 | AT2G26140 | 40.081 | 247 | 143 | 2 | 156 | 402 | 224 | 465 | 2.72e-49 | 178 |
MS.gene028423.t1 | AT3G02450 | 40.079 | 252 | 144 | 3 | 152 | 401 | 327 | 573 | 4.93e-49 | 176 |
MS.gene028423.t1 | AT5G53170 | 38.976 | 254 | 149 | 2 | 157 | 410 | 360 | 607 | 1.42e-48 | 177 |
MS.gene028423.t1 | AT2G34560 | 37.594 | 266 | 153 | 6 | 154 | 411 | 98 | 358 | 2.35e-47 | 167 |
MS.gene028423.t1 | AT2G34560 | 37.594 | 266 | 153 | 6 | 154 | 411 | 107 | 367 | 3.02e-47 | 166 |
MS.gene028423.t1 | AT1G03000 | 39.749 | 239 | 137 | 6 | 152 | 387 | 651 | 885 | 4.12e-47 | 173 |
MS.gene028423.t1 | AT1G80350 | 36.395 | 294 | 153 | 8 | 150 | 416 | 230 | 516 | 5.33e-47 | 169 |
MS.gene028423.t1 | AT5G08470 | 41.176 | 238 | 129 | 4 | 158 | 393 | 834 | 1062 | 1.08e-45 | 169 |
MS.gene028423.t1 | AT5G08470 | 41.176 | 238 | 129 | 4 | 158 | 393 | 843 | 1071 | 1.09e-45 | 169 |
MS.gene028423.t1 | AT2G03670 | 36.585 | 246 | 142 | 4 | 161 | 397 | 24 | 264 | 2.03e-45 | 162 |
MS.gene028423.t1 | AT2G03670 | 38.854 | 157 | 96 | 0 | 139 | 295 | 266 | 422 | 5.52e-29 | 117 |
MS.gene028423.t1 | AT3G15120 | 39.224 | 232 | 129 | 4 | 158 | 382 | 718 | 944 | 2.19e-44 | 166 |
MS.gene028423.t1 | AT3G15120 | 39.224 | 232 | 129 | 4 | 158 | 382 | 728 | 954 | 2.52e-44 | 166 |
MS.gene028423.t1 | AT2G27600 | 39.837 | 246 | 135 | 8 | 139 | 380 | 112 | 348 | 3.56e-44 | 159 |
MS.gene028423.t1 | AT2G45500 | 38.618 | 246 | 137 | 8 | 144 | 384 | 68 | 304 | 2.35e-43 | 155 |
MS.gene028423.t1 | AT2G45500 | 38.618 | 246 | 137 | 8 | 144 | 384 | 68 | 304 | 2.35e-43 | 155 |
MS.gene028423.t1 | AT3G01610 | 39.485 | 233 | 135 | 3 | 153 | 384 | 522 | 749 | 7.69e-43 | 160 |
MS.gene028423.t1 | AT3G01610 | 35.223 | 247 | 144 | 3 | 148 | 383 | 222 | 463 | 6.38e-39 | 149 |
MS.gene028423.t1 | AT3G01610 | 39.485 | 233 | 135 | 3 | 153 | 384 | 522 | 749 | 7.81e-43 | 160 |
MS.gene028423.t1 | AT3G01610 | 35.223 | 247 | 144 | 3 | 148 | 383 | 222 | 463 | 6.94e-39 | 149 |
MS.gene028423.t1 | AT2G45500 | 38.618 | 246 | 137 | 8 | 144 | 384 | 201 | 437 | 3.56e-42 | 155 |
MS.gene028423.t1 | AT2G45500 | 38.189 | 254 | 143 | 8 | 136 | 384 | 197 | 441 | 4.37e-42 | 155 |
MS.gene028423.t1 | AT2G45500 | 38.189 | 254 | 143 | 8 | 136 | 384 | 203 | 447 | 4.80e-42 | 155 |
MS.gene028423.t1 | AT3G19740 | 39.827 | 231 | 129 | 5 | 158 | 384 | 703 | 927 | 1.47e-41 | 157 |
MS.gene028423.t1 | AT4G02480 | 37.931 | 232 | 134 | 5 | 157 | 384 | 961 | 1186 | 4.77e-41 | 156 |
MS.gene028423.t1 | AT1G50140 | 39.394 | 231 | 130 | 5 | 158 | 384 | 713 | 937 | 1.06e-40 | 155 |
MS.gene028423.t1 | AT1G50140 | 39.394 | 231 | 130 | 5 | 158 | 384 | 713 | 937 | 1.06e-40 | 155 |
MS.gene028423.t1 | AT1G50140 | 39.394 | 231 | 130 | 5 | 158 | 384 | 713 | 937 | 1.06e-40 | 155 |
MS.gene028423.t1 | AT1G50140 | 39.394 | 231 | 130 | 5 | 158 | 384 | 691 | 915 | 1.14e-40 | 154 |
MS.gene028423.t1 | AT1G50140 | 39.394 | 231 | 130 | 5 | 158 | 384 | 691 | 915 | 1.14e-40 | 154 |
MS.gene028423.t1 | AT4G28000 | 37.229 | 231 | 135 | 6 | 157 | 384 | 518 | 741 | 5.62e-40 | 152 |
MS.gene028423.t1 | AT4G28000 | 37.229 | 231 | 135 | 6 | 157 | 384 | 518 | 741 | 7.28e-40 | 152 |
MS.gene028423.t1 | AT4G28000 | 37.229 | 231 | 135 | 6 | 157 | 384 | 516 | 739 | 7.67e-40 | 152 |
MS.gene028423.t1 | AT5G53540 | 35.206 | 267 | 150 | 7 | 155 | 405 | 83 | 342 | 8.28e-40 | 147 |
MS.gene028423.t1 | AT4G24860 | 36.910 | 233 | 139 | 4 | 155 | 384 | 816 | 1043 | 1.18e-39 | 152 |
MS.gene028423.t1 | AT4G24860 | 36.910 | 233 | 139 | 4 | 155 | 384 | 814 | 1041 | 1.26e-39 | 152 |
MS.gene028423.t1 | AT4G24860 | 36.910 | 233 | 139 | 4 | 155 | 384 | 789 | 1016 | 1.72e-39 | 151 |
MS.gene028423.t1 | AT4G24860 | 36.910 | 233 | 139 | 4 | 155 | 384 | 812 | 1039 | 1.74e-39 | 151 |
MS.gene028423.t1 | AT1G02890 | 37.500 | 232 | 135 | 5 | 157 | 384 | 942 | 1167 | 2.05e-39 | 151 |
MS.gene028423.t1 | AT1G64110 | 36.797 | 231 | 137 | 5 | 157 | 384 | 514 | 738 | 8.54e-39 | 149 |
MS.gene028423.t1 | AT1G64110 | 36.797 | 231 | 137 | 5 | 157 | 384 | 517 | 741 | 8.76e-39 | 149 |
MS.gene028423.t1 | AT1G64110 | 36.797 | 231 | 137 | 5 | 157 | 384 | 517 | 741 | 8.76e-39 | 149 |
MS.gene028423.t1 | AT1G64110 | 36.797 | 231 | 137 | 5 | 157 | 384 | 519 | 743 | 9.05e-39 | 149 |
MS.gene028423.t1 | AT1G64110 | 36.797 | 231 | 137 | 5 | 157 | 384 | 519 | 743 | 9.05e-39 | 149 |
MS.gene028423.t1 | AT4G27680 | 36.752 | 234 | 137 | 5 | 155 | 384 | 80 | 306 | 1.38e-38 | 144 |
MS.gene028423.t1 | AT4G04910 | 35.556 | 270 | 141 | 7 | 161 | 401 | 217 | 482 | 1.93e-37 | 144 |
MS.gene028423.t1 | AT5G52882 | 36.364 | 231 | 137 | 6 | 157 | 384 | 515 | 738 | 2.73e-37 | 144 |
MS.gene028423.t1 | AT3G27120 | 32.168 | 286 | 167 | 9 | 150 | 416 | 394 | 671 | 1.53e-36 | 142 |
MS.gene028423.t1 | AT1G79560 | 34.234 | 222 | 131 | 3 | 181 | 393 | 514 | 729 | 4.99e-33 | 132 |
MS.gene028423.t1 | AT1G79560 | 34.234 | 222 | 131 | 3 | 181 | 393 | 514 | 729 | 5.37e-33 | 132 |
MS.gene028423.t1 | AT1G79560 | 34.234 | 222 | 131 | 3 | 181 | 393 | 514 | 729 | 6.09e-33 | 132 |
MS.gene028423.t1 | AT1G62130 | 33.195 | 241 | 135 | 7 | 157 | 393 | 744 | 962 | 5.34e-30 | 123 |
MS.gene028423.t1 | AT1G62130 | 33.195 | 241 | 135 | 7 | 157 | 393 | 751 | 969 | 6.21e-30 | 123 |
MS.gene028423.t1 | AT4G04180 | 33.761 | 234 | 129 | 7 | 157 | 377 | 312 | 532 | 9.85e-30 | 121 |
MS.gene028423.t1 | AT4G04180 | 33.761 | 234 | 129 | 7 | 157 | 377 | 317 | 537 | 1.03e-29 | 121 |
MS.gene028423.t1 | AT3G04340 | 32.103 | 271 | 161 | 9 | 120 | 373 | 736 | 1000 | 1.19e-25 | 110 |
MS.gene028423.t1 | AT5G08470 | 40.268 | 149 | 85 | 1 | 158 | 306 | 843 | 987 | 3.04e-25 | 108 |
MS.gene028423.t1 | AT1G02890 | 31.466 | 232 | 121 | 6 | 157 | 384 | 942 | 1139 | 6.88e-24 | 105 |
MS.gene028423.t1 | AT5G17760 | 32.022 | 178 | 106 | 6 | 156 | 326 | 216 | 385 | 1.89e-14 | 75.5 |
MS.gene028423.t1 | AT4G24710 | 29.375 | 160 | 97 | 3 | 196 | 341 | 217 | 374 | 4.77e-14 | 74.3 |
MS.gene028423.t1 | AT4G24710 | 29.375 | 160 | 97 | 3 | 196 | 341 | 205 | 362 | 4.79e-14 | 73.9 |
MS.gene028423.t1 | AT2G18193 | 30.857 | 175 | 109 | 4 | 156 | 326 | 206 | 372 | 1.57e-13 | 72.8 |
MS.gene028423.t1 | AT4G24710 | 30.159 | 126 | 74 | 2 | 196 | 307 | 217 | 342 | 1.05e-12 | 69.3 |
MS.gene028423.t1 | AT4G24710 | 30.159 | 126 | 74 | 2 | 196 | 307 | 217 | 342 | 1.05e-12 | 69.3 |
MS.gene028423.t1 | AT5G16930 | 32.450 | 151 | 93 | 5 | 194 | 343 | 399 | 541 | 1.14e-12 | 70.1 |
MS.gene028423.t1 | AT2G18330 | 34.028 | 144 | 86 | 5 | 194 | 336 | 386 | 521 | 1.37e-12 | 70.1 |
MS.gene028423.t1 | AT4G36580 | 33.333 | 144 | 87 | 5 | 194 | 336 | 383 | 518 | 2.90e-12 | 68.9 |
MS.gene028423.t1 | AT3G03060 | 32.450 | 151 | 93 | 5 | 194 | 343 | 387 | 529 | 4.08e-12 | 68.6 |
MS.gene028423.t1 | AT5G17740 | 29.282 | 181 | 110 | 6 | 156 | 326 | 208 | 380 | 9.89e-12 | 67.0 |
MS.gene028423.t1 | AT3G50930 | 31.319 | 182 | 105 | 8 | 156 | 326 | 262 | 434 | 1.49e-11 | 66.6 |
MS.gene028423.t1 | AT3G50940 | 30.178 | 169 | 105 | 5 | 163 | 326 | 216 | 376 | 2.04e-11 | 65.9 |
MS.gene028423.t1 | AT4G05380 | 32.075 | 159 | 84 | 7 | 183 | 326 | 233 | 382 | 2.89e-11 | 65.5 |
Find 100 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAAGCTCAGGATGTTTAAT+TGG | 0.236938 | 4.2:-18894432 | None:intergenic |
TCACAGGGTGTCTTGCTCTA+TGG | 0.253894 | 4.2:+18894573 | MS.gene028423:intron |
CAAACCTCTTCATTAGGATT+TGG | 0.256280 | 4.2:-18895550 | None:intergenic |
CTCCCCTTGTTTGGTTGGTT+TGG | 0.269659 | 4.2:-18891815 | None:intergenic |
GGAAGAACTGCAGCTTCTTC+AGG | 0.294426 | 4.2:+18893014 | MS.gene028423:CDS |
TCAACAACATATTTCCCTTC+TGG | 0.316681 | 4.2:-18894096 | None:intergenic |
TGCTCCATCAATTATCTTCA+TGG | 0.351085 | 4.2:+18895132 | MS.gene028423:CDS |
TTAAATTCATTCTTCTTGAA+TGG | 0.356511 | 4.2:-18895706 | None:intergenic |
AGGAGCCTGGTTCATATGTT+GGG | 0.363290 | 4.2:+18893034 | MS.gene028423:CDS |
ACGGAGACCCTCCCCTTGTT+TGG | 0.367288 | 4.2:-18891824 | None:intergenic |
AAGATGCAAACCTCTTCATT+AGG | 0.374465 | 4.2:-18895556 | None:intergenic |
GAGAAGGTTCTAGAATGGTT+AGG | 0.383338 | 4.2:+18894700 | MS.gene028423:CDS |
CAGGAGCCTGGTTCATATGT+TGG | 0.387317 | 4.2:+18893033 | MS.gene028423:CDS |
TGTACATTCATCAGGGTGTC+TGG | 0.388654 | 4.2:+18894651 | MS.gene028423:CDS |
CACAGGGTGTCTTGCTCTAT+GGG | 0.390742 | 4.2:+18894574 | MS.gene028423:intron |
TCGTCCATGAAGATAATTGA+TGG | 0.392466 | 4.2:-18895136 | None:intergenic |
ATACTGATTGTACATTCATC+AGG | 0.399410 | 4.2:+18894643 | MS.gene028423:CDS |
TTTGGACAGTGAGGATGCTT+CGG | 0.403502 | 4.2:+18892992 | MS.gene028423:intron |
GGATCTGCTCGTATGGAATC+TGG | 0.411007 | 4.2:+18895172 | MS.gene028423:CDS |
AACGTAACGAGCTCAATTCT+AGG | 0.412070 | 4.2:+18891926 | MS.gene028423:CDS |
AGCATCTGGTGCTGAGCTTA+AGG | 0.412390 | 4.2:+18895772 | MS.gene028423:CDS |
ACCAATGGATCAACTTTGCT+TGG | 0.422834 | 4.2:-18894207 | None:intergenic |
CACCAATCGGATTGATATCC+TGG | 0.427746 | 4.2:+18895480 | MS.gene028423:CDS |
TGTCAATCCGTCCAGGTCTC+AGG | 0.427849 | 4.2:-18895513 | None:intergenic |
ATGGACGAAATTGACAGTAT+TGG | 0.429793 | 4.2:+18895151 | MS.gene028423:CDS |
TTGGACAGTGAGGATGCTTC+GGG | 0.433244 | 4.2:+18892993 | MS.gene028423:intron |
GTCTTGCTCTATGGGCCACC+TGG | 0.438579 | 4.2:+18894582 | MS.gene028423:CDS |
CTCTATGGGCCACCTGGTAC+AGG | 0.438619 | 4.2:+18894588 | MS.gene028423:CDS |
ATCATGTCATATGTAGAATC+AGG | 0.441088 | 4.2:-18894255 | None:intergenic |
TCCAAGCAAAGTTGATCCAT+TGG | 0.453561 | 4.2:+18894206 | MS.gene028423:CDS |
TAGGCTGTGTGCACTGAAGC+TGG | 0.461439 | 4.2:+18896713 | MS.gene028423:intron |
TGAGACCTGGACGGATTGAC+AGG | 0.462916 | 4.2:+18895515 | MS.gene028423:CDS |
TTGGCAGAGCAATGCTCCTC+CGG | 0.467372 | 4.2:-18891796 | None:intergenic |
AGAAGGTTCTAGAATGGTTA+GGG | 0.470154 | 4.2:+18894701 | MS.gene028423:CDS |
CAGTATTGGATCTGCTCGTA+TGG | 0.473028 | 4.2:+18895165 | MS.gene028423:CDS |
CTGCAGCTTCTTCAGGAGCC+TGG | 0.474864 | 4.2:+18893021 | MS.gene028423:CDS |
AGACCCTCCCCTTGTTTGGT+TGG | 0.479760 | 4.2:-18891820 | None:intergenic |
GTCTCAGGAGTGCTTGATCC+AGG | 0.483737 | 4.2:-18895498 | None:intergenic |
TGAAGCTTCCAATAAGATCA+AGG | 0.484032 | 4.2:+18895261 | MS.gene028423:CDS |
AACATTGTTGGCTAGGGCAG+TGG | 0.488091 | 4.2:+18894614 | MS.gene028423:CDS |
AAGCTTCAAATCCATCCAAC+TGG | 0.490388 | 4.2:-18895246 | None:intergenic |
TGAAGTGCAGCGTACTATGC+TGG | 0.493786 | 4.2:+18895213 | MS.gene028423:CDS |
GAGAAGATGAATGGAGCATC+TGG | 0.497037 | 4.2:+18895758 | MS.gene028423:CDS |
GAACTTGTTCAGAAATACAT+TGG | 0.500672 | 4.2:+18894678 | MS.gene028423:CDS |
CGAAGAGCAACTCTAGTAGA+TGG | 0.500788 | 4.2:-18894153 | None:intergenic |
GAACTTCTCAACCAGTTGGA+TGG | 0.502365 | 4.2:+18895235 | MS.gene028423:CDS |
ACGTAACGAGCTCAATTCTA+GGG | 0.502522 | 4.2:+18891927 | MS.gene028423:CDS |
GAAGCATGCCGAGGGTGCAC+CGG | 0.505872 | 4.2:+18891777 | MS.gene028423:CDS |
AAGATTGCTGAGAAGATGAA+TGG | 0.505915 | 4.2:+18895749 | MS.gene028423:CDS |
ATCTTCCTGTCAATCCGTCC+AGG | 0.508744 | 4.2:-18895520 | None:intergenic |
ATGCTCCTCCGGTGCACCCT+CGG | 0.511471 | 4.2:-18891785 | None:intergenic |
CATTGGAGAAGGTTCTAGAA+TGG | 0.526027 | 4.2:+18894695 | MS.gene028423:CDS |
ACATGTCATTGAGGAAGTTG+TGG | 0.527779 | 4.2:+18896828 | MS.gene028423:CDS |
GTTCAGAAATACATTGGAGA+AGG | 0.530083 | 4.2:+18894684 | MS.gene028423:CDS |
GATTCTACATATGACATGAT+TGG | 0.538886 | 4.2:+18894258 | MS.gene028423:CDS |
CAGGATATCAATCCGATTGG+TGG | 0.543342 | 4.2:-18895479 | None:intergenic |
TTTCTTCAGGTCCATCCAGA+AGG | 0.548623 | 4.2:+18894081 | MS.gene028423:intron |
GCATGCCGAGGGTGCACCGG+AGG | 0.551420 | 4.2:+18891780 | MS.gene028423:CDS |
GCTCGTATGGAATCTGGAAG+TGG | 0.557452 | 4.2:+18895178 | MS.gene028423:CDS |
TGGGGAAGTCGTTAAAGTGA+TGG | 0.558114 | 4.2:+18893053 | MS.gene028423:CDS |
ATTTCCAAATCCTAATGAAG+AGG | 0.559940 | 4.2:+18895546 | MS.gene028423:CDS |
TCTGCCAAACCAACCAAACA+AGG | 0.562521 | 4.2:+18891811 | MS.gene028423:CDS |
GAATGTTTGCTCTGAGAGAG+AGG | 0.563359 | 4.2:+18896735 | MS.gene028423:CDS |
CAACATATTTCCCTTCTGGA+TGG | 0.563974 | 4.2:-18894092 | None:intergenic |
CGTGGCAAAGGTGATGAAGA+AGG | 0.564116 | 4.2:+18896793 | MS.gene028423:CDS |
ACAAATCAAAGAAATAAAAG+AGG | 0.566379 | 4.2:+18894293 | MS.gene028423:CDS |
GGGGAAGTCGTTAAAGTGAT+GGG | 0.566973 | 4.2:+18893054 | MS.gene028423:CDS |
ATCCAGGATATCAATCCGAT+TGG | 0.573250 | 4.2:-18895482 | None:intergenic |
GATCAAGCACTCCTGAGACC+TGG | 0.576588 | 4.2:+18895502 | MS.gene028423:CDS |
TTCTTCAGGTCCATCCAGAA+GGG | 0.577294 | 4.2:+18894082 | MS.gene028423:intron |
GATGGGCAAGAACAAAGTCT+TGG | 0.577623 | 4.2:+18893071 | MS.gene028423:CDS |
GGAGCCTGGTTCATATGTTG+GGG | 0.579737 | 4.2:+18893035 | MS.gene028423:CDS |
GAGGAGGGTACACGTGACAC+AGG | 0.581105 | 4.2:+18896754 | MS.gene028423:CDS |
GCTGGAACTTCTCAACCAGT+TGG | 0.589168 | 4.2:+18895231 | MS.gene028423:CDS |
CGTTACGTTGCGCCTCGAGA+CGG | 0.590961 | 4.2:-18891912 | None:intergenic |
ATGGAATCTGGAAGTGGCAA+TGG | 0.600506 | 4.2:+18895184 | MS.gene028423:CDS |
CTTCTTCATCACCTTTGCCA+CGG | 0.600877 | 4.2:-18896792 | None:intergenic |
GGTGAAGGAGCTGAAGCTCA+TGG | 0.606891 | 4.2:-18891867 | None:intergenic |
TGTGCTGAGTATAGTATTGA+CGG | 0.610288 | 4.2:-18891843 | None:intergenic |
TCTACATATGACATGATTGG+TGG | 0.611571 | 4.2:+18894261 | MS.gene028423:CDS |
ACTTTCATCAGATTAACCAA+TGG | 0.612930 | 4.2:-18894222 | None:intergenic |
CAAACCAACCAAACAAGGGG+AGG | 0.622103 | 4.2:+18891816 | MS.gene028423:CDS |
GTTTGCTCTGAGAGAGAGGA+GGG | 0.624635 | 4.2:+18896739 | MS.gene028423:CDS |
ATCTGATCTATGGCTGCCGT+CGG | 0.626800 | 4.2:+18891745 | None:intergenic |
TACTGATTGTACATTCATCA+GGG | 0.626895 | 4.2:+18894644 | MS.gene028423:CDS |
CAAGAACAAAGTCTTGGTCA+AGG | 0.631707 | 4.2:+18893077 | MS.gene028423:CDS |
CTGCCAAACCAACCAAACAA+GGG | 0.631755 | 4.2:+18891812 | MS.gene028423:CDS |
TGCCAAACCAACCAAACAAG+GGG | 0.631947 | 4.2:+18891813 | MS.gene028423:CDS |
AGAAGAATGAATTTAATGCG+TGG | 0.632686 | 4.2:+18895713 | MS.gene028423:CDS |
GTAGAAGTGAAGCATGCCGA+GGG | 0.639336 | 4.2:+18891769 | MS.gene028423:CDS |
TCTTGGAATAGCTCAACCGA+AGG | 0.650779 | 4.2:+18894461 | MS.gene028423:CDS |
AGTAGAAGTGAAGCATGCCG+AGG | 0.652737 | 4.2:+18891768 | MS.gene028423:CDS |
ACTTCCCCAACATATGAACC+AGG | 0.653226 | 4.2:-18893039 | None:intergenic |
AAGCACTCCTGAGACCTGGA+CGG | 0.655986 | 4.2:+18895506 | MS.gene028423:CDS |
AAACCAACCAAACAAGGGGA+GGG | 0.659041 | 4.2:+18891817 | MS.gene028423:CDS |
TGTTTGCTCTGAGAGAGAGG+AGG | 0.667718 | 4.2:+18896738 | MS.gene028423:CDS |
ATGCTTCACTTCTACTCCGA+CGG | 0.669417 | 4.2:-18891761 | None:intergenic |
TCATAATCTTAACCGTCTCG+AGG | 0.679147 | 4.2:+18891900 | MS.gene028423:CDS |
GAGGGTACACGTGACACAGG+AGG | 0.687991 | 4.2:+18896757 | MS.gene028423:CDS |
CGTAACGAGCTCAATTCTAG+GGG | 0.691922 | 4.2:+18891928 | MS.gene028423:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAATAAAAAATGATTAG+AGG | + | chr4.2:18892197-18892216 | MS.gene028423:intron | 15.0% |
!! | AAATATAACTCAAATACATT+AGG | - | chr4.2:18892459-18892478 | None:intergenic | 15.0% |
!! | AATAGTATGAAATATAAAAC+TGG | + | chr4.2:18896196-18896215 | MS.gene028423:intron | 15.0% |
!! | AGAATTTAGATTAATCAATA+CGG | - | chr4.2:18893808-18893827 | None:intergenic | 15.0% |
!! | ATAGTATGAAATATAAAACT+GGG | + | chr4.2:18896197-18896216 | MS.gene028423:intron | 15.0% |
!! | GAATATTATATGAAAATGAA+AGG | - | chr4.2:18895945-18895964 | None:intergenic | 15.0% |
!! | TTATCCAATAAATAATATCT+AGG | + | chr4.2:18892628-18892647 | MS.gene028423:intron | 15.0% |
!!! | ATGTATTTGAGTTATATTTT+TGG | + | chr4.2:18892460-18892479 | MS.gene028423:intron | 15.0% |
!!! | TTTTTTTTTTAATGATGCTA+TGG | + | chr4.2:18895287-18895306 | MS.gene028423:intron | 15.0% |
!! | AAAAATTACCTTGATCTTAT+TGG | - | chr4.2:18895272-18895291 | None:intergenic | 20.0% |
!! | AAATATAAAACTGTAACAGA+GGG | + | chr4.2:18895363-18895382 | MS.gene028423:intron | 20.0% |
!! | AAGAATAAAAAAGAGGAATA+GGG | - | chr4.2:18891968-18891987 | None:intergenic | 20.0% |
!! | AAGATATGAATTTGAAAACT+GGG | - | chr4.2:18892676-18892695 | None:intergenic | 20.0% |
!! | ACAAATCAAAGAAATAAAAG+AGG | + | chr4.2:18894293-18894312 | MS.gene028423:CDS | 20.0% |
!! | AGTATTTAGACTAATCAATA+CGG | - | chr4.2:18893772-18893791 | None:intergenic | 20.0% |
!! | GAATTTAGATTAATCAATAC+GGG | - | chr4.2:18893807-18893826 | None:intergenic | 20.0% |
!! | TAAATATAAAACTGTAACAG+AGG | + | chr4.2:18895362-18895381 | MS.gene028423:intron | 20.0% |
!! | TATAGCAGAATACTATTTAA+AGG | + | chr4.2:18893572-18893591 | MS.gene028423:intron | 20.0% |
!! | TATTTAGATTAATCAATACG+AGG | - | chr4.2:18893666-18893685 | None:intergenic | 20.0% |
!! | TCAATTCAATAGATAATAAG+AGG | + | chr4.2:18892048-18892067 | MS.gene028423:intron | 20.0% |
!! | TTAAATTCATTCTTCTTGAA+TGG | - | chr4.2:18895709-18895728 | None:intergenic | 20.0% |
!! | TTATTATTAATTTCATGCAC+AGG | - | chr4.2:18894021-18894040 | None:intergenic | 20.0% |
!!! | AAATCCAGAAAAGTTATTTT+TGG | - | chr4.2:18892953-18892972 | None:intergenic | 20.0% |
!!! | AATCCAGAAAAGTTATTTTT+GGG | - | chr4.2:18892952-18892971 | None:intergenic | 20.0% |
!!! | ATATAGTTGTTTTCAGTAAA+TGG | - | chr4.2:18895653-18895672 | None:intergenic | 20.0% |
!!! | ATCATCTAAAATATTGTCAT+CGG | + | chr4.2:18895845-18895864 | MS.gene028423:intron | 20.0% |
!!! | ATGTATAAAAGCATTTAAGA+AGG | - | chr4.2:18893722-18893741 | None:intergenic | 20.0% |
!!! | CTTTTATTTCTTTGATTTGT+TGG | - | chr4.2:18894293-18894312 | None:intergenic | 20.0% |
!!! | TAAATGCTTTTATACATAGT+TGG | + | chr4.2:18893725-18893744 | MS.gene028423:intron | 20.0% |
!!! | TAAGATTATGATTCTTTTGA+CGG | - | chr4.2:18891891-18891910 | None:intergenic | 20.0% |
!!! | TCATTTACATCAAATTTTAC+AGG | + | chr4.2:18894398-18894417 | MS.gene028423:intron | 20.0% |
!!! | TTTTATTGTTTTAGACAACT+GGG | - | chr4.2:18892188-18892207 | None:intergenic | 20.0% |
!!! | TTTTTATTGTTTTAGACAAC+TGG | - | chr4.2:18892189-18892208 | None:intergenic | 20.0% |
! | AAACAAAGTGATTGCATAAT+AGG | - | chr4.2:18895967-18895986 | None:intergenic | 25.0% |
! | AAATGATAGTAAATCAGTGA+AGG | - | chr4.2:18892845-18892864 | None:intergenic | 25.0% |
! | ACATAAATCTTCACTTCTTA+AGG | - | chr4.2:18893862-18893881 | None:intergenic | 25.0% |
! | AGTAGTGTTACATATCATAT+TGG | - | chr4.2:18895095-18895114 | None:intergenic | 25.0% |
! | ATATATAACAGTACAGATAG+CGG | - | chr4.2:18893172-18893191 | None:intergenic | 25.0% |
! | CAACAATAACATGTTAATGT+TGG | - | chr4.2:18896048-18896067 | None:intergenic | 25.0% |
! | CAAGAATAAAAAAGAGGAAT+AGG | - | chr4.2:18891969-18891988 | None:intergenic | 25.0% |
! | CAATAGATAATAAGAGGATA+TGG | + | chr4.2:18892054-18892073 | MS.gene028423:intron | 25.0% |
! | CACACCTAGATATTATTTAT+TGG | - | chr4.2:18892635-18892654 | None:intergenic | 25.0% |
! | CACTATTAAAGTGATTTACA+AGG | - | chr4.2:18893928-18893947 | None:intergenic | 25.0% |
! | CATAATTCTATCTGAATAGT+AGG | - | chr4.2:18896540-18896559 | None:intergenic | 25.0% |
! | CTCAATACAATCATATCAAA+GGG | - | chr4.2:18895595-18895614 | None:intergenic | 25.0% |
! | GAAGAGAAAATTGCAATTAT+AGG | + | chr4.2:18895447-18895466 | MS.gene028423:intron | 25.0% |
! | GAAGATATGAATTTGAAAAC+TGG | - | chr4.2:18892677-18892696 | None:intergenic | 25.0% |
! | GAAGCATAGATCAATAAAAA+TGG | - | chr4.2:18893639-18893658 | None:intergenic | 25.0% |
! | GCAATTCAAGAATAAAAAAG+AGG | - | chr4.2:18891975-18891994 | None:intergenic | 25.0% |
! | GTATTTAGACTAATCAATAC+GGG | - | chr4.2:18893771-18893790 | None:intergenic | 25.0% |
! | TAAATACTCATGTACATAGT+TGG | + | chr4.2:18893680-18893699 | MS.gene028423:intron | 25.0% |
! | TAATAGTTGATTGGATTGTT+GGG | + | chr4.2:18896293-18896312 | MS.gene028423:intron | 25.0% |
! | TACAAGGATAAAAATTCCAT+AGG | - | chr4.2:18893912-18893931 | None:intergenic | 25.0% |
! | TAGCATCAACATAAATAAGA+GGG | + | chr4.2:18894782-18894801 | MS.gene028423:intron | 25.0% |
! | TATATGTATATGTATGCTGA+AGG | - | chr4.2:18895630-18895649 | None:intergenic | 25.0% |
! | TATTTAGACTAATCAATACG+GGG | - | chr4.2:18893770-18893789 | None:intergenic | 25.0% |
! | TCTATCACATCAAACTTATT+AGG | + | chr4.2:18892695-18892714 | MS.gene028423:intron | 25.0% |
! | TCTCAATACAATCATATCAA+AGG | - | chr4.2:18895596-18895615 | None:intergenic | 25.0% |
!! | AATTTTACAATGCGAAACAA+AGG | + | chr4.2:18896010-18896029 | MS.gene028423:intron | 25.0% |
!! | ATAAACGGATTCAAAATTTG+AGG | - | chr4.2:18892094-18892113 | None:intergenic | 25.0% |
!! | CTCTTTTCATTATTCATTGT+TGG | + | chr4.2:18893443-18893462 | MS.gene028423:intron | 25.0% |
!! | TTAACACATTATTTCAAGTG+TGG | + | chr4.2:18896654-18896673 | MS.gene028423:intron | 25.0% |
!!! | AAACTTTGGTTTGTTTATGT+GGG | + | chr4.2:18892340-18892359 | MS.gene028423:intron | 25.0% |
!!! | AATGGATTTTCAAGATATCT+CGG | - | chr4.2:18895691-18895710 | None:intergenic | 25.0% |
!!! | ATCCAGAAAAGTTATTTTTG+GGG | - | chr4.2:18892951-18892970 | None:intergenic | 25.0% |
!!! | ATTGCAATTATAGGTTTTGA+TGG | + | chr4.2:18895456-18895475 | MS.gene028423:intron | 25.0% |
!!! | ATTTTCTTTTGCTGTAAGAT+CGG | + | chr4.2:18892736-18892755 | MS.gene028423:intron | 25.0% |
!!! | TCTGTGCTTTTATTTTATGT+AGG | + | chr4.2:18896694-18896713 | MS.gene028423:intron | 25.0% |
!!! | TTGTGAGACATTGTTTTTTT+AGG | - | chr4.2:18895013-18895032 | None:intergenic | 25.0% |
AAAAACAAATTGAGCCATCA+TGG | - | chr4.2:18893144-18893163 | None:intergenic | 30.0% | |
AAAAGCTCAGGATGTTTAAT+TGG | - | chr4.2:18894435-18894454 | None:intergenic | 30.0% | |
AAAATGATTAGAGGACATTG+TGG | + | chr4.2:18892206-18892225 | MS.gene028423:intron | 30.0% | |
AAACAAACAAAAGCTTATCC+TGG | - | chr4.2:18892425-18892444 | None:intergenic | 30.0% | |
AAATAGTACAGAATCTTGGT+TGG | + | chr4.2:18893886-18893905 | MS.gene028423:intron | 30.0% | |
AACTCATGCAATATTACCTT+CGG | - | chr4.2:18894480-18894499 | None:intergenic | 30.0% | |
AATAGTAGGATTTGTGAAAG+GGG | - | chr4.2:18896526-18896545 | None:intergenic | 30.0% | |
AATATGGAATTCAACAAGGT+TGG | + | chr4.2:18892253-18892272 | MS.gene028423:intron | 30.0% | |
ACATTTACTTCAAATGAGCA+TGG | - | chr4.2:18895053-18895072 | None:intergenic | 30.0% | |
ACTTTCATCAGATTAACCAA+TGG | - | chr4.2:18894225-18894244 | None:intergenic | 30.0% | |
AGAAGAATGAATTTAATGCG+TGG | + | chr4.2:18895713-18895732 | MS.gene028423:CDS | 30.0% | |
AGTGTATTATGCAACAATAG+TGG | - | chr4.2:18893281-18893300 | None:intergenic | 30.0% | |
ATAATGAATGGAGTAGGTTT+AGG | - | chr4.2:18894759-18894778 | None:intergenic | 30.0% | |
ATACCTTAATTGCTTCAACA+AGG | - | chr4.2:18895871-18895890 | None:intergenic | 30.0% | |
ATATGAATTTGAAAACTGGG+AGG | - | chr4.2:18892673-18892692 | None:intergenic | 30.0% | |
ATCATGTCATATGTAGAATC+AGG | - | chr4.2:18894258-18894277 | None:intergenic | 30.0% | |
ATTAGAGGGAATTCCATAAT+TGG | + | chr4.2:18895316-18895335 | MS.gene028423:intron | 30.0% | |
ATTATGCTGGAATGTCATAA+TGG | + | chr4.2:18896554-18896573 | MS.gene028423:intron | 30.0% | |
ATTTCCAAATCCTAATGAAG+AGG | + | chr4.2:18895546-18895565 | MS.gene028423:CDS | 30.0% | |
CACTTATTGAGATAAACAAC+GGG | + | chr4.2:18895917-18895936 | MS.gene028423:intron | 30.0% | |
CAGTTATAAACACTTCATAG+TGG | + | chr4.2:18896377-18896396 | MS.gene028423:intron | 30.0% | |
CCTAAAATAGTACAGAATCT+TGG | + | chr4.2:18893882-18893901 | MS.gene028423:intron | 30.0% | |
CTAATAGTTGATTGGATTGT+TGG | + | chr4.2:18896292-18896311 | MS.gene028423:intron | 30.0% | |
CTATATATACACACAAAACC+AGG | + | chr4.2:18892404-18892423 | MS.gene028423:intron | 30.0% | |
CTATTCAGATAGAATTATGC+TGG | + | chr4.2:18896541-18896560 | MS.gene028423:intron | 30.0% | |
GAACAAAAAATCCTAGACAA+AGG | + | chr4.2:18894041-18894060 | MS.gene028423:intron | 30.0% | |
GAACTCATGACTATATCTAA+TGG | + | chr4.2:18893982-18894001 | MS.gene028423:intron | 30.0% | |
GAATAGTAGGATTTGTGAAA+GGG | - | chr4.2:18896527-18896546 | None:intergenic | 30.0% | |
GATTCTACATATGACATGAT+TGG | + | chr4.2:18894258-18894277 | MS.gene028423:CDS | 30.0% | |
GCACTTATTGAGATAAACAA+CGG | + | chr4.2:18895916-18895935 | MS.gene028423:intron | 30.0% | |
GTAGCATCAACATAAATAAG+AGG | + | chr4.2:18894781-18894800 | MS.gene028423:intron | 30.0% | |
GTGAACGTATAACTCAAATT+AGG | - | chr4.2:18895410-18895429 | None:intergenic | 30.0% | |
GTTATACGTTCACAATTTAG+AGG | + | chr4.2:18895417-18895436 | MS.gene028423:intron | 30.0% | |
TCACATCAAACTTATTAGGA+AGG | + | chr4.2:18892699-18892718 | MS.gene028423:intron | 30.0% | |
TCCAAATTGCAATTGAATCA+GGG | - | chr4.2:18892978-18892997 | None:intergenic | 30.0% | |
TGAATAGTAGGATTTGTGAA+AGG | - | chr4.2:18896528-18896547 | None:intergenic | 30.0% | |
TTATTAATTTCATGCACAGG+TGG | - | chr4.2:18894018-18894037 | None:intergenic | 30.0% | |
TTGATGCTACACATAATGAA+TGG | - | chr4.2:18894771-18894790 | None:intergenic | 30.0% | |
TTGTTAAATAGCAGCTATAG+TGG | + | chr4.2:18893219-18893238 | MS.gene028423:intron | 30.0% | |
! | ACCTTTGAAAAGACAACAAT+GGG | + | chr4.2:18894979-18894998 | MS.gene028423:intron | 30.0% |
! | ATACTGATTGTACATTCATC+AGG | + | chr4.2:18894643-18894662 | MS.gene028423:CDS | 30.0% |
! | ATGCAATCACTTTGTTTGAT+GGG | + | chr4.2:18895970-18895989 | MS.gene028423:intron | 30.0% |
! | CCAAGATTCTGTACTATTTT+AGG | - | chr4.2:18893885-18893904 | None:intergenic | 30.0% |
! | GAACTTGTTCAGAAATACAT+TGG | + | chr4.2:18894678-18894697 | MS.gene028423:CDS | 30.0% |
! | GTTGTCTAAGATATTATCTC+AGG | + | chr4.2:18896067-18896086 | MS.gene028423:intron | 30.0% |
! | TACTGATTGTACATTCATCA+GGG | + | chr4.2:18894644-18894663 | MS.gene028423:CDS | 30.0% |
! | TATGCAATCACTTTGTTTGA+TGG | + | chr4.2:18895969-18895988 | MS.gene028423:intron | 30.0% |
! | TTTGAAGTAAATGTGTTCTG+AGG | + | chr4.2:18895059-18895078 | MS.gene028423:intron | 30.0% |
!! | AGTTTCCATTACTTTTCTTC+AGG | + | chr4.2:18894068-18894087 | MS.gene028423:intron | 30.0% |
!! | CAAACTTTGGTTTGTTTATG+TGG | + | chr4.2:18892339-18892358 | MS.gene028423:intron | 30.0% |
!!! | TCCAGAAAAGTTATTTTTGG+GGG | - | chr4.2:18892950-18892969 | None:intergenic | 30.0% |
AACACACATGTTGCCAATTA+TGG | - | chr4.2:18895332-18895351 | None:intergenic | 35.0% | |
AAGATGCAAACCTCTTCATT+AGG | - | chr4.2:18895559-18895578 | None:intergenic | 35.0% | |
ACTATACCACTATAGTGTAG+CGG | + | chr4.2:18893243-18893262 | MS.gene028423:intron | 35.0% | |
AGAACTGGGTGTAATAGTAA+CGG | + | chr4.2:18896247-18896266 | MS.gene028423:intron | 35.0% | |
AGATATTATCTCAGGTCATG+AGG | + | chr4.2:18896075-18896094 | MS.gene028423:intron | 35.0% | |
ATAAACACTTCATAGTGGTG+AGG | + | chr4.2:18896382-18896401 | MS.gene028423:intron | 35.0% | |
ATGGACCTGAAGAAAAGTAA+TGG | - | chr4.2:18894076-18894095 | None:intergenic | 35.0% | |
ATGGACGAAATTGACAGTAT+TGG | + | chr4.2:18895151-18895170 | MS.gene028423:CDS | 35.0% | |
ATGGTCGAAGATATATCTGA+TGG | + | chr4.2:18894840-18894859 | MS.gene028423:intron | 35.0% | |
CAAACCTCTTCATTAGGATT+TGG | - | chr4.2:18895553-18895572 | None:intergenic | 35.0% | |
CACAGAAAATTGAGCATACT+AGG | - | chr4.2:18896680-18896699 | None:intergenic | 35.0% | |
CGGTAATATGGAATTCAACA+AGG | + | chr4.2:18892249-18892268 | MS.gene028423:intron | 35.0% | |
CTACACATAATGAATGGAGT+AGG | - | chr4.2:18894765-18894784 | None:intergenic | 35.0% | |
CTCAATTTCTCCAACAAGAT+TGG | - | chr4.2:18892293-18892312 | None:intergenic | 35.0% | |
GAATTGTCTATGTCTCACAT+TGG | + | chr4.2:18893465-18893484 | MS.gene028423:intron | 35.0% | |
GACAAATATTGTCCTTTGAG+CGG | + | chr4.2:18892498-18892517 | MS.gene028423:intron | 35.0% | |
GCTATGAATTTACGTGTTCA+TGG | + | chr4.2:18896589-18896608 | MS.gene028423:intron | 35.0% | |
GTCCAAATTGCAATTGAATC+AGG | - | chr4.2:18892979-18892998 | None:intergenic | 35.0% | |
GTTCAGAAATACATTGGAGA+AGG | + | chr4.2:18894684-18894703 | MS.gene028423:CDS | 35.0% | |
TAAACACTTCATAGTGGTGA+GGG | + | chr4.2:18896383-18896402 | MS.gene028423:intron | 35.0% | |
TACAACTTCAGCAGTTACTA+CGG | - | chr4.2:18894900-18894919 | None:intergenic | 35.0% | |
TCAACAACATATTTCCCTTC+TGG | - | chr4.2:18894099-18894118 | None:intergenic | 35.0% | |
TCATGACTATATCTAATGGC+TGG | + | chr4.2:18893986-18894005 | MS.gene028423:intron | 35.0% | |
TCATTTCAGAGTGAAGAACT+GGG | + | chr4.2:18896233-18896252 | MS.gene028423:intron | 35.0% | |
TCCCTGATTCAATTGCAATT+TGG | + | chr4.2:18892974-18892993 | MS.gene028423:intron | 35.0% | |
TCGTCCATGAAGATAATTGA+TGG | - | chr4.2:18895139-18895158 | None:intergenic | 35.0% | |
TCTACATATGACATGATTGG+TGG | + | chr4.2:18894261-18894280 | MS.gene028423:CDS | 35.0% | |
TGAAGCTTCCAATAAGATCA+AGG | + | chr4.2:18895261-18895280 | MS.gene028423:CDS | 35.0% | |
TGCTCCATCAATTATCTTCA+TGG | + | chr4.2:18895132-18895151 | MS.gene028423:CDS | 35.0% | |
TGGTACAGGAAAAACATTGT+TGG | + | chr4.2:18894602-18894621 | MS.gene028423:CDS | 35.0% | |
TGGTCGAAGATATATCTGAT+GGG | + | chr4.2:18894841-18894860 | MS.gene028423:intron | 35.0% | |
TTAGATGATAATAGAGCAGC+AGG | - | chr4.2:18895834-18895853 | None:intergenic | 35.0% | |
TTATGTATCTTCGAGTCCAT+GGG | + | chr4.2:18893599-18893618 | MS.gene028423:intron | 35.0% | |
TTCATTTCAGAGTGAAGAAC+TGG | + | chr4.2:18896232-18896251 | MS.gene028423:intron | 35.0% | |
! | AACAATGTTTTTCCTGTACC+AGG | - | chr4.2:18894603-18894622 | None:intergenic | 35.0% |
! | AGGAAAAACATTGTTGGCTA+GGG | + | chr4.2:18894608-18894627 | MS.gene028423:CDS | 35.0% |
! | ATGCTATGGTAGTGTATTAG+AGG | + | chr4.2:18895301-18895320 | MS.gene028423:intron | 35.0% |
! | CAAAGTTTGGGTTTATTCCA+TGG | + | chr4.2:18896441-18896460 | MS.gene028423:intron | 35.0% |
! | CCTCAATGACATGTTTTTCT+CGG | - | chr4.2:18896822-18896841 | None:intergenic | 35.0% |
! | GACCTTTGAAAAGACAACAA+TGG | + | chr4.2:18894978-18894997 | MS.gene028423:intron | 35.0% |
! | GCTCTATTTTACGTATCACA+GGG | + | chr4.2:18894558-18894577 | MS.gene028423:intron | 35.0% |
! | GGTTAGGGAACTTTTTGTTA+TGG | + | chr4.2:18894716-18894735 | MS.gene028423:CDS | 35.0% |
! | GTGGGTTACTAATAGTTGAT+TGG | + | chr4.2:18896284-18896303 | MS.gene028423:intron | 35.0% |
! | TAACACTACTCCTTTTCACA+GGG | + | chr4.2:18895105-18895124 | MS.gene028423:intron | 35.0% |
! | TATGATTCTTTTGACGGTGA+AGG | - | chr4.2:18891885-18891904 | None:intergenic | 35.0% |
! | TCTTTTCAAAGGTCAGTTAG+TGG | - | chr4.2:18894972-18894991 | None:intergenic | 35.0% |
! | TGCAATCACTTTGTTTGATG+GGG | + | chr4.2:18895971-18895990 | MS.gene028423:intron | 35.0% |
! | TGCTATGGTAGTGTATTAGA+GGG | + | chr4.2:18895302-18895321 | MS.gene028423:intron | 35.0% |
! | TGCTCTATTTTACGTATCAC+AGG | + | chr4.2:18894557-18894576 | MS.gene028423:intron | 35.0% |
! | TGTGCTGAGTATAGTATTGA+CGG | - | chr4.2:18891846-18891865 | None:intergenic | 35.0% |
!! | AGAAGGTTCTAGAATGGTTA+GGG | + | chr4.2:18894701-18894720 | MS.gene028423:CDS | 35.0% |
!! | GAAAAGTTTTGACAAGACCA+CGG | - | chr4.2:18893545-18893564 | None:intergenic | 35.0% |
!! | GTTGATTTGTATCACCCTTT+GGG | + | chr4.2:18892126-18892145 | MS.gene028423:intron | 35.0% |
!! | TGGTTTGTTTATGTGGGTTT+GGG | + | chr4.2:18892346-18892365 | MS.gene028423:intron | 35.0% |
!! | TTGATTTGTATCACCCTTTG+GGG | + | chr4.2:18892127-18892146 | MS.gene028423:intron | 35.0% |
!! | TTGGTTTGTTTATGTGGGTT+TGG | + | chr4.2:18892345-18892364 | MS.gene028423:intron | 35.0% |
!!! | CCAGAAAAGTTATTTTTGGG+GGG | - | chr4.2:18892949-18892968 | None:intergenic | 35.0% |
AAATATTGTCCTTTGAGCGG+TGG | + | chr4.2:18892501-18892520 | MS.gene028423:intron | 40.0% | |
AACCCAGAGGGGTAAATAAA+CGG | - | chr4.2:18892109-18892128 | None:intergenic | 40.0% | |
AACGTAACGAGCTCAATTCT+AGG | + | chr4.2:18891926-18891945 | MS.gene028423:CDS | 40.0% | |
AACTGGGTGTAATAGTAACG+GGG | + | chr4.2:18896249-18896268 | MS.gene028423:intron | 40.0% | |
AAGCTTCAAATCCATCCAAC+TGG | - | chr4.2:18895249-18895268 | None:intergenic | 40.0% | |
AATCCGTTTATTTACCCCTC+TGG | + | chr4.2:18892103-18892122 | MS.gene028423:intron | 40.0% | |
ACATGTCATTGAGGAAGTTG+TGG | + | chr4.2:18896828-18896847 | MS.gene028423:CDS | 40.0% | |
ACCAATGGATCAACTTTGCT+TGG | - | chr4.2:18894210-18894229 | None:intergenic | 40.0% | |
ACGTAACGAGCTCAATTCTA+GGG | + | chr4.2:18891927-18891946 | MS.gene028423:CDS | 40.0% | |
ACTAACAGGAAACAGCAGAA+TGG | - | chr4.2:18893959-18893978 | None:intergenic | 40.0% | |
ATATCTAGGTGTGAGCTGTA+TGG | + | chr4.2:18892642-18892661 | MS.gene028423:intron | 40.0% | |
ATCCAGGATATCAATCCGAT+TGG | - | chr4.2:18895485-18895504 | None:intergenic | 40.0% | |
ATCCGTTTATTTACCCCTCT+GGG | + | chr4.2:18892104-18892123 | MS.gene028423:intron | 40.0% | |
ATCTTCGACCATAAAAGCCA+TGG | - | chr4.2:18894832-18894851 | None:intergenic | 40.0% | |
ATGGAGTAGGTTTAGGTAAG+AGG | - | chr4.2:18894752-18894771 | None:intergenic | 40.0% | |
ATGGTTGGGTTTCGGTAATA+TGG | + | chr4.2:18892237-18892256 | MS.gene028423:intron | 40.0% | |
ATTTGGTCACTGGCAAACTT+TGG | + | chr4.2:18892326-18892345 | MS.gene028423:intron | 40.0% | |
CAACATATTTCCCTTCTGGA+TGG | - | chr4.2:18894095-18894114 | None:intergenic | 40.0% | |
CAAGAACAAAGTCTTGGTCA+AGG | + | chr4.2:18893077-18893096 | MS.gene028423:CDS | 40.0% | |
CAATTGCAATTTGGACAGTG+AGG | + | chr4.2:18892983-18893002 | MS.gene028423:intron | 40.0% | |
CCAAGACTTTCAAAAAGCTC+AGG | - | chr4.2:18894447-18894466 | None:intergenic | 40.0% | |
CCGAGAAAAACATGTCATTG+AGG | + | chr4.2:18896819-18896838 | MS.gene028423:CDS | 40.0% | |
CTCTAGATCATTAATTGCCG+TGG | + | chr4.2:18893525-18893544 | MS.gene028423:intron | 40.0% | |
CTTATGTATCTTCGAGTCCA+TGG | + | chr4.2:18893598-18893617 | MS.gene028423:intron | 40.0% | |
GAACTGGGTGTAATAGTAAC+GGG | + | chr4.2:18896248-18896267 | MS.gene028423:intron | 40.0% | |
GATACTGACACAACATCAAC+TGG | + | chr4.2:18892555-18892574 | MS.gene028423:intron | 40.0% | |
GGAGAAATTGAGAGTAGTGA+AGG | + | chr4.2:18892301-18892320 | MS.gene028423:intron | 40.0% | |
GGATGAAACAATAAAGCCCA+TGG | - | chr4.2:18893618-18893637 | None:intergenic | 40.0% | |
GGCACAAGTAAACTCAACTT+AGG | + | chr4.2:18894862-18894881 | MS.gene028423:intron | 40.0% | |
GTCATGAGTTCATGACTAAC+AGG | - | chr4.2:18893973-18893992 | None:intergenic | 40.0% | |
GTGATACAAATCAACCCAGA+GGG | - | chr4.2:18892121-18892140 | None:intergenic | 40.0% | |
TAGTCACAGACCAATCTTGT+TGG | + | chr4.2:18892280-18892299 | MS.gene028423:intron | 40.0% | |
TCATAATCTTAACCGTCTCG+AGG | + | chr4.2:18891900-18891919 | MS.gene028423:CDS | 40.0% | |
TGAATTTGAAAACTGGGAGG+AGG | - | chr4.2:18892670-18892689 | None:intergenic | 40.0% | |
TGAGAGTAGTGAAGGTGATT+TGG | + | chr4.2:18892309-18892328 | MS.gene028423:intron | 40.0% | |
TGATACAAATCAACCCAGAG+GGG | - | chr4.2:18892120-18892139 | None:intergenic | 40.0% | |
TGTCGTCTGGATCAAAGTTT+GGG | + | chr4.2:18896429-18896448 | MS.gene028423:intron | 40.0% | |
TTGATTGGATTGTTGGGTAG+TGG | + | chr4.2:18896299-18896318 | MS.gene028423:intron | 40.0% | |
TTGGGTTTATTCCATGGTGT+TGG | + | chr4.2:18896447-18896466 | MS.gene028423:intron | 40.0% | |
TTGTCGTCTGGATCAAAGTT+TGG | + | chr4.2:18896428-18896447 | MS.gene028423:intron | 40.0% | |
TTTAGACAACTGGGTGTAGA+TGG | - | chr4.2:18892179-18892198 | None:intergenic | 40.0% | |
TTTAGGTAAGAGGTCAAACC+TGG | - | chr4.2:18894742-18894761 | None:intergenic | 40.0% | |
TTTGAAAAACCACCGCTCAA+AGG | - | chr4.2:18892513-18892532 | None:intergenic | 40.0% | |
! | AATGTTTTTCCTGTACCAGG+TGG | - | chr4.2:18894600-18894619 | None:intergenic | 40.0% |
! | AGTAACGGGGAACTAAACAT+GGG | + | chr4.2:18896262-18896281 | MS.gene028423:intron | 40.0% |
! | CAATCACTTTGTTTGATGGG+GGG | + | chr4.2:18895973-18895992 | MS.gene028423:intron | 40.0% |
! | CAGGAAAAACATTGTTGGCT+AGG | + | chr4.2:18894607-18894626 | MS.gene028423:CDS | 40.0% |
! | CCCCCCAAAAATAACTTTTC+TGG | + | chr4.2:18892946-18892965 | MS.gene028423:intron | 40.0% |
! | CTTGACTTCCATGGCTTTTA+TGG | + | chr4.2:18894821-18894840 | MS.gene028423:intron | 40.0% |
! | GCAATCACTTTGTTTGATGG+GGG | + | chr4.2:18895972-18895991 | MS.gene028423:intron | 40.0% |
! | GCCCATTGTTGTCTTTTCAA+AGG | - | chr4.2:18894983-18895002 | None:intergenic | 40.0% |
! | GTAACACTACTCCTTTTCAC+AGG | + | chr4.2:18895104-18895123 | MS.gene028423:intron | 40.0% |
! | GTGGGTTACTAGTTACAGTT+TGG | + | chr4.2:18896336-18896355 | MS.gene028423:intron | 40.0% |
! | TAGTAACGGGGAACTAAACA+TGG | + | chr4.2:18896261-18896280 | MS.gene028423:intron | 40.0% |
! | TCCAAGCAAAGTTGATCCAT+TGG | + | chr4.2:18894206-18894225 | MS.gene028423:CDS | 40.0% |
! | TGACGTTTTCTTGACTTCCA+TGG | + | chr4.2:18894812-18894831 | MS.gene028423:intron | 40.0% |
!! | CATTGGAGAAGGTTCTAGAA+TGG | + | chr4.2:18894695-18894714 | MS.gene028423:CDS | 40.0% |
!! | CCTGAGCTTTTTGAAAGTCT+TGG | + | chr4.2:18894444-18894463 | MS.gene028423:CDS | 40.0% |
!! | CGGTGGTTTTTCAAAGTAGT+AGG | + | chr4.2:18892518-18892537 | MS.gene028423:intron | 40.0% |
!! | CTAGTTACAGTTTGGTCTTG+CGG | + | chr4.2:18896344-18896363 | MS.gene028423:intron | 40.0% |
!! | CTTTTGCTGTAAGATCGGTT+GGG | + | chr4.2:18892741-18892760 | MS.gene028423:intron | 40.0% |
!! | GAGAAGGTTCTAGAATGGTT+AGG | + | chr4.2:18894700-18894719 | MS.gene028423:CDS | 40.0% |
!! | GGTAGTGGAGAACTAAACAT+GGG | + | chr4.2:18896314-18896333 | MS.gene028423:intron | 40.0% |
!! | GGTTGATTTGTATCACCCTT+TGG | + | chr4.2:18892125-18892144 | MS.gene028423:intron | 40.0% |
!! | TAGTTACAGTTTGGTCTTGC+GGG | + | chr4.2:18896345-18896364 | MS.gene028423:intron | 40.0% |
!! | TCTTTTGCTGTAAGATCGGT+TGG | + | chr4.2:18892740-18892759 | MS.gene028423:intron | 40.0% |
AAACCAACCAAACAAGGGGA+GGG | + | chr4.2:18891817-18891836 | MS.gene028423:CDS | 45.0% | |
ACACGTTGGATAACCCCAAA+GGG | - | chr4.2:18892143-18892162 | None:intergenic | 45.0% | |
ACTTCCCCAACATATGAACC+AGG | - | chr4.2:18893042-18893061 | None:intergenic | 45.0% | |
AGGAGCCTGGTTCATATGTT+GGG | + | chr4.2:18893034-18893053 | MS.gene028423:CDS | 45.0% | |
AGTGGAGAACTAAACATGGG+TGG | + | chr4.2:18896317-18896336 | MS.gene028423:intron | 45.0% | |
ATGCTTCACTTCTACTCCGA+CGG | - | chr4.2:18891764-18891783 | None:intergenic | 45.0% | |
ATGGAATCTGGAAGTGGCAA+TGG | + | chr4.2:18895184-18895203 | MS.gene028423:CDS | 45.0% | |
ATTGAGCCATCATGGTAGAG+TGG | - | chr4.2:18893136-18893155 | None:intergenic | 45.0% | |
ATTTGGCAAACGTTGTCGTC+TGG | + | chr4.2:18896416-18896435 | MS.gene028423:intron | 45.0% | |
CAAATGCCGCTACACTATAG+TGG | - | chr4.2:18893252-18893271 | None:intergenic | 45.0% | |
CACCAATCGGATTGATATCC+TGG | + | chr4.2:18895480-18895499 | MS.gene028423:CDS | 45.0% | |
CACTATAGTGTAGCGGCATT+TGG | + | chr4.2:18893250-18893269 | MS.gene028423:intron | 45.0% | |
CAGGATATCAATCCGATTGG+TGG | - | chr4.2:18895482-18895501 | None:intergenic | 45.0% | |
CGAAGAGCAACTCTAGTAGA+TGG | - | chr4.2:18894156-18894175 | None:intergenic | 45.0% | |
CGTAACGAGCTCAATTCTAG+GGG | + | chr4.2:18891928-18891947 | MS.gene028423:CDS | 45.0% | |
CTGCCAAACCAACCAAACAA+GGG | + | chr4.2:18891812-18891831 | MS.gene028423:CDS | 45.0% | |
CTTCTTCATCACCTTTGCCA+CGG | - | chr4.2:18896795-18896814 | None:intergenic | 45.0% | |
CTTGATCCACTCTACCATGA+TGG | + | chr4.2:18893127-18893146 | MS.gene028423:intron | 45.0% | |
GAACTTCTCAACCAGTTGGA+TGG | + | chr4.2:18895235-18895254 | MS.gene028423:CDS | 45.0% | |
GATGATAATAGAGCAGCAGG+AGG | - | chr4.2:18895831-18895850 | None:intergenic | 45.0% | |
GATGGGCAAGAACAAAGTCT+TGG | + | chr4.2:18893071-18893090 | MS.gene028423:CDS | 45.0% | |
GGAAACTCAGTCCTTTGTCT+AGG | - | chr4.2:18894055-18894074 | None:intergenic | 45.0% | |
GGGGAAGTCGTTAAAGTGAT+GGG | + | chr4.2:18893054-18893073 | MS.gene028423:CDS | 45.0% | |
GGTGATACAAATCAACCCAG+AGG | - | chr4.2:18892122-18892141 | None:intergenic | 45.0% | |
GTGGAGAACTAAACATGGGT+GGG | + | chr4.2:18896318-18896337 | MS.gene028423:intron | 45.0% | |
TCTGCCAAACCAACCAAACA+AGG | + | chr4.2:18891811-18891830 | MS.gene028423:CDS | 45.0% | |
TCTTGGAATAGCTCAACCGA+AGG | + | chr4.2:18894461-18894480 | MS.gene028423:CDS | 45.0% | |
TGCCAAACCAACCAAACAAG+GGG | + | chr4.2:18891813-18891832 | MS.gene028423:CDS | 45.0% | |
TGGGGAAGTCGTTAAAGTGA+TGG | + | chr4.2:18893053-18893072 | MS.gene028423:CDS | 45.0% | |
TTCTTCAGGTCCATCCAGAA+GGG | + | chr4.2:18894082-18894101 | MS.gene028423:intron | 45.0% | |
TTGTCCAATAGCCGCTATAG+TGG | + | chr4.2:18893316-18893335 | MS.gene028423:intron | 45.0% | |
TTTCTTCAGGTCCATCCAGA+AGG | + | chr4.2:18894081-18894100 | MS.gene028423:intron | 45.0% | |
TTTGGACAGTGAGGATGCTT+CGG | + | chr4.2:18892992-18893011 | MS.gene028423:intron | 45.0% | |
! | ACTTTGTTTGATGGGGGGTA+AGG | + | chr4.2:18895978-18895997 | MS.gene028423:intron | 45.0% |
! | CAGTATTGGATCTGCTCGTA+TGG | + | chr4.2:18895165-18895184 | MS.gene028423:CDS | 45.0% |
! | CGTAGCGGAATTTCAGCAAT+CGG | + | chr4.2:18893355-18893374 | MS.gene028423:intron | 45.0% |
! | GAGAAGATGAATGGAGCATC+TGG | + | chr4.2:18895758-18895777 | MS.gene028423:CDS | 45.0% |
! | GCTATAGCACTTTTGCGTAG+CGG | + | chr4.2:18893340-18893359 | MS.gene028423:intron | 45.0% |
! | GGTTTGGGTCTTTCTAGCAT+GGG | + | chr4.2:18892361-18892380 | MS.gene028423:intron | 45.0% |
! | GTTTGGGTCTTTCTAGCATG+GGG | + | chr4.2:18892362-18892381 | MS.gene028423:intron | 45.0% |
! | TGTACATTCATCAGGGTGTC+TGG | + | chr4.2:18894651-18894670 | MS.gene028423:CDS | 45.0% |
!! | ACAGAATCTTGGTTGGCCTA+TGG | + | chr4.2:18893893-18893912 | MS.gene028423:intron | 45.0% |
!! | AGGTTTTGATGGCCACCAAT+CGG | + | chr4.2:18895467-18895486 | MS.gene028423:intron | 45.0% |
!! | AGTGAAGGTGATTTGGTCAC+TGG | + | chr4.2:18892316-18892335 | MS.gene028423:intron | 45.0% |
!! | AGTTACAGTTTGGTCTTGCG+GGG | + | chr4.2:18896346-18896365 | MS.gene028423:intron | 45.0% |
!! | CGGCCTTGTTGAAGCAATTA+AGG | + | chr4.2:18895865-18895884 | MS.gene028423:intron | 45.0% |
!! | GAATGTTTGCTCTGAGAGAG+AGG | + | chr4.2:18896735-18896754 | MS.gene028423:CDS | 45.0% |
!! | GACACAGGAGGATTTTGAGA+TGG | + | chr4.2:18896769-18896788 | MS.gene028423:CDS | 45.0% |
!! | GGGAACTTTTTGTTATGGCC+AGG | + | chr4.2:18894721-18894740 | MS.gene028423:CDS | 45.0% |
!! | GGGTAGTGGAGAACTAAACA+TGG | + | chr4.2:18896313-18896332 | MS.gene028423:intron | 45.0% |
AACGGGGAACTAAACATGGG+TGG | + | chr4.2:18896265-18896284 | MS.gene028423:intron | 50.0% | |
ACAGCCATGTATGCTGACAG+AGG | - | chr4.2:18894520-18894539 | None:intergenic | 50.0% | |
ACGGGGAACTAAACATGGGT+GGG | + | chr4.2:18896266-18896285 | MS.gene028423:intron | 50.0% | |
AGTAGAAGTGAAGCATGCCG+AGG | + | chr4.2:18891768-18891787 | MS.gene028423:CDS | 50.0% | |
ATCTTCCTGTCAATCCGTCC+AGG | - | chr4.2:18895523-18895542 | None:intergenic | 50.0% | |
ATTGTGGCTGAGAGGATGGT+TGG | + | chr4.2:18892222-18892241 | MS.gene028423:intron | 50.0% | |
CAAACCAACCAAACAAGGGG+AGG | + | chr4.2:18891816-18891835 | MS.gene028423:CDS | 50.0% | |
CAGGAGCCTGGTTCATATGT+TGG | + | chr4.2:18893033-18893052 | MS.gene028423:CDS | 50.0% | |
CAGGTCATGAGGCGAAACAA+AGG | + | chr4.2:18896086-18896105 | MS.gene028423:intron | 50.0% | |
CCATCCTCTGTCAGCATACA+TGG | + | chr4.2:18894513-18894532 | MS.gene028423:intron | 50.0% | |
CCATGTATGCTGACAGAGGA+TGG | - | chr4.2:18894516-18894535 | None:intergenic | 50.0% | |
CGTGGCAAAGGTGATGAAGA+AGG | + | chr4.2:18896793-18896812 | MS.gene028423:CDS | 50.0% | |
CTGAGAGGATGGTTGGGTTT+CGG | + | chr4.2:18892229-18892248 | MS.gene028423:intron | 50.0% | |
GACACGTTGGATAACCCCAA+AGG | - | chr4.2:18892144-18892163 | None:intergenic | 50.0% | |
GCTCGTATGGAATCTGGAAG+TGG | + | chr4.2:18895178-18895197 | MS.gene028423:CDS | 50.0% | |
GCTGGAACTTCTCAACCAGT+TGG | + | chr4.2:18895231-18895250 | MS.gene028423:CDS | 50.0% | |
GGAAGAACTGCAGCTTCTTC+AGG | + | chr4.2:18893014-18893033 | MS.gene028423:CDS | 50.0% | |
GGAGCCTGGTTCATATGTTG+GGG | + | chr4.2:18893035-18893054 | MS.gene028423:CDS | 50.0% | |
GGATCTGCTCGTATGGAATC+TGG | + | chr4.2:18895172-18895191 | MS.gene028423:CDS | 50.0% | |
GTAGAAGTGAAGCATGCCGA+GGG | + | chr4.2:18891769-18891788 | MS.gene028423:CDS | 50.0% | |
GTGCTATAGCGCCACTATAG+CGG | - | chr4.2:18893330-18893349 | None:intergenic | 50.0% | |
GTTATCCAACGTGTCGCAGA+TGG | + | chr4.2:18892149-18892168 | MS.gene028423:intron | 50.0% | |
TAGAGGACATTGTGGCTGAG+AGG | + | chr4.2:18892214-18892233 | MS.gene028423:intron | 50.0% | |
TCATAGTGGTGAGGGTGACT+GGG | + | chr4.2:18896391-18896410 | MS.gene028423:intron | 50.0% | |
TGAAGTGCAGCGTACTATGC+TGG | + | chr4.2:18895213-18895232 | MS.gene028423:CDS | 50.0% | |
TGTCAACGTCACCAACACCA+TGG | - | chr4.2:18896461-18896480 | None:intergenic | 50.0% | |
TTCATAGTGGTGAGGGTGAC+TGG | + | chr4.2:18896390-18896409 | MS.gene028423:intron | 50.0% | |
TTGGACAGTGAGGATGCTTC+GGG | + | chr4.2:18892993-18893012 | MS.gene028423:intron | 50.0% | |
TTGTGGCTGAGAGGATGGTT+GGG | + | chr4.2:18892223-18892242 | MS.gene028423:intron | 50.0% | |
! | AACATTGTTGGCTAGGGCAG+TGG | + | chr4.2:18894614-18894633 | MS.gene028423:CDS | 50.0% |
! | AGCATCTGGTGCTGAGCTTA+AGG | + | chr4.2:18895772-18895791 | MS.gene028423:CDS | 50.0% |
! | CACAGGGTGTCTTGCTCTAT+GGG | + | chr4.2:18894574-18894593 | MS.gene028423:intron | 50.0% |
! | CTCCCCTTGTTTGGTTGGTT+TGG | - | chr4.2:18891818-18891837 | None:intergenic | 50.0% |
! | GGGTTTGGGTCTTTCTAGCA+TGG | + | chr4.2:18892360-18892379 | MS.gene028423:intron | 50.0% |
! | GTCTTTCTAGCATGGGGAGT+CGG | + | chr4.2:18892368-18892387 | MS.gene028423:intron | 50.0% |
! | TCACAGGGTGTCTTGCTCTA+TGG | + | chr4.2:18894573-18894592 | MS.gene028423:intron | 50.0% |
!! | GTTTGCTCTGAGAGAGAGGA+GGG | + | chr4.2:18896739-18896758 | MS.gene028423:CDS | 50.0% |
!! | TGTTTGCTCTGAGAGAGAGG+AGG | + | chr4.2:18896738-18896757 | MS.gene028423:CDS | 50.0% |
!!! | TTTTGAGATGGCCGTGGCAA+AGG | + | chr4.2:18896781-18896800 | MS.gene028423:CDS | 50.0% |
AAGCACTCCTGAGACCTGGA+CGG | + | chr4.2:18895506-18895525 | MS.gene028423:CDS | 55.0% | |
AGCGCCACTATAGCGGCTAT+TGG | - | chr4.2:18893323-18893342 | None:intergenic | 55.0% | |
GATCAAGCACTCCTGAGACC+TGG | + | chr4.2:18895502-18895521 | MS.gene028423:CDS | 55.0% | |
GGACATTGTGGCTGAGAGGA+TGG | + | chr4.2:18892218-18892237 | MS.gene028423:intron | 55.0% | |
GGAGCATGCTCCCTGTGAAA+AGG | - | chr4.2:18895118-18895137 | None:intergenic | 55.0% | |
GGTGAAGGAGCTGAAGCTCA+TGG | - | chr4.2:18891870-18891889 | None:intergenic | 55.0% | |
GTGAACCATCTGCGACACGT+TGG | - | chr4.2:18892157-18892176 | None:intergenic | 55.0% | |
GTGAGGGTGACTGGGTCATT+TGG | + | chr4.2:18896399-18896418 | MS.gene028423:intron | 55.0% | |
TAGGCTGTGTGCACTGAAGC+TGG | + | chr4.2:18896713-18896732 | MS.gene028423:intron | 55.0% | |
TGTCAATCCGTCCAGGTCTC+AGG | - | chr4.2:18895516-18895535 | None:intergenic | 55.0% | |
TTGGCAGAGCAATGCTCCTC+CGG | - | chr4.2:18891799-18891818 | None:intergenic | 55.0% | |
! | AGACCCTCCCCTTGTTTGGT+TGG | - | chr4.2:18891823-18891842 | None:intergenic | 55.0% |
!! | GTCTCAGGAGTGCTTGATCC+AGG | - | chr4.2:18895501-18895520 | None:intergenic | 55.0% |
!! | TGAGACCTGGACGGATTGAC+AGG | + | chr4.2:18895515-18895534 | MS.gene028423:CDS | 55.0% |
!!! | GGAGGATTTTGAGATGGCCG+TGG | + | chr4.2:18896775-18896794 | MS.gene028423:CDS | 55.0% |
ACGGAGACCCTCCCCTTGTT+TGG | - | chr4.2:18891827-18891846 | None:intergenic | 60.0% | |
CGTTACGTTGCGCCTCGAGA+CGG | - | chr4.2:18891915-18891934 | None:intergenic | 60.0% | |
CTCTATGGGCCACCTGGTAC+AGG | + | chr4.2:18894588-18894607 | MS.gene028423:CDS | 60.0% | |
CTGCAGCTTCTTCAGGAGCC+TGG | + | chr4.2:18893021-18893040 | MS.gene028423:CDS | 60.0% | |
GTCTTGCTCTATGGGCCACC+TGG | + | chr4.2:18894582-18894601 | MS.gene028423:CDS | 60.0% | |
! | GAGGAGGGTACACGTGACAC+AGG | + | chr4.2:18896754-18896773 | MS.gene028423:CDS | 60.0% |
! | GAGGGTACACGTGACACAGG+AGG | + | chr4.2:18896757-18896776 | MS.gene028423:CDS | 60.0% |
ATGCTCCTCCGGTGCACCCT+CGG | - | chr4.2:18891788-18891807 | None:intergenic | 65.0% | |
! | GAAGCATGCCGAGGGTGCAC+CGG | + | chr4.2:18891777-18891796 | MS.gene028423:CDS | 65.0% |
! | GCATGCCGAGGGTGCACCGG+AGG | + | chr4.2:18891780-18891799 | MS.gene028423:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 18891754 | 18896856 | 18891754 | ID=MS.gene028423 |
chr4.2 | mRNA | 18891754 | 18896856 | 18891754 | ID=MS.gene028423.t1;Parent=MS.gene028423 |
chr4.2 | exon | 18891754 | 18891949 | 18891754 | ID=MS.gene028423.t1.exon1;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18891754 | 18891949 | 18891754 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
chr4.2 | exon | 18893001 | 18893098 | 18893001 | ID=MS.gene028423.t1.exon2;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18893001 | 18893098 | 18893001 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
chr4.2 | exon | 18894090 | 18894314 | 18894090 | ID=MS.gene028423.t1.exon3;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18894090 | 18894314 | 18894090 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
chr4.2 | exon | 18894420 | 18894482 | 18894420 | ID=MS.gene028423.t1.exon4;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18894420 | 18894482 | 18894420 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
chr4.2 | exon | 18894579 | 18894742 | 18894579 | ID=MS.gene028423.t1.exon5;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18894579 | 18894742 | 18894579 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
chr4.2 | exon | 18895126 | 18895282 | 18895126 | ID=MS.gene028423.t1.exon6;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18895126 | 18895282 | 18895126 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
chr4.2 | exon | 18895469 | 18895567 | 18895469 | ID=MS.gene028423.t1.exon7;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18895469 | 18895567 | 18895469 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
chr4.2 | exon | 18895683 | 18895793 | 18895683 | ID=MS.gene028423.t1.exon8;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18895683 | 18895793 | 18895683 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
chr4.2 | exon | 18896716 | 18896856 | 18896716 | ID=MS.gene028423.t1.exon9;Parent=MS.gene028423.t1 |
chr4.2 | CDS | 18896716 | 18896856 | 18896716 | ID=cds.MS.gene028423.t1;Parent=MS.gene028423.t1 |
Gene Sequence |
Protein sequence |