AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34009

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34009.t1 MTR_8g023550 94.836 426 7 1 1 426 1 411 0.0 820
MS.gene34009.t1 MTR_1g095660 96.104 385 9 1 48 426 1 385 0.0 751
MS.gene34009.t1 MTR_4g094270 53.890 347 149 4 72 411 61 403 6.36e-120 355
MS.gene34009.t1 MTR_3g117230 49.375 320 161 1 103 422 77 395 2.86e-112 335
MS.gene34009.t1 MTR_3g112260 48.607 323 165 1 100 422 71 392 5.09e-112 335
MS.gene34009.t1 MTR_1g083330 52.881 295 136 1 115 409 120 411 2.39e-105 318
MS.gene34009.t1 MTR_4g033235 52.881 295 136 1 115 409 121 412 3.73e-105 318
MS.gene34009.t1 MTR_1g069105 46.628 341 174 3 85 423 112 446 7.09e-105 318
MS.gene34009.t1 MTR_7g099640 46.628 341 174 3 85 423 111 445 1.13e-104 317
MS.gene34009.t1 MTR_3g062510 55.253 257 115 0 146 402 140 396 1.56e-103 313
MS.gene34009.t1 MTR_7g099640 47.742 310 158 1 85 394 111 416 1.74e-100 306
MS.gene34009.t1 MTR_3g062510 61.275 204 79 0 146 349 140 343 5.27e-92 282
MS.gene34009.t1 MTR_1g069105 48.315 267 134 1 85 351 112 374 1.87e-86 269
MS.gene34009.t1 MTR_7g010800 39.051 274 166 1 146 419 187 459 4.11e-64 218
MS.gene34009.t1 MTR_3g115110 43.307 254 143 1 165 418 249 501 2.85e-63 216
MS.gene34009.t1 MTR_1g063380 43.568 241 136 0 151 391 464 704 7.12e-62 214
MS.gene34009.t1 MTR_1g063380 39.768 259 150 4 164 419 204 459 1.87e-58 205
MS.gene34009.t1 MTR_4g094662 41.016 256 150 1 159 414 223 477 1.33e-61 211
MS.gene34009.t1 MTR_6g059690 42.642 265 148 3 154 415 186 449 2.30e-61 211
MS.gene34009.t1 MTR_2g438140 41.016 256 150 1 159 414 220 474 2.50e-61 211
MS.gene34009.t1 MTR_7g101870 42.231 251 145 0 151 401 465 715 6.76e-61 211
MS.gene34009.t1 MTR_7g101870 40.756 238 138 2 164 401 205 439 8.86e-58 203
MS.gene34009.t1 MTR_2g438140 41.016 256 150 1 159 414 280 534 8.61e-61 209
MS.gene34009.t1 MTR_2g095210 43.154 241 137 0 151 391 392 632 7.68e-60 207
MS.gene34009.t1 MTR_2g095210 52.222 90 42 1 160 248 201 290 1.21e-21 98.2
MS.gene34009.t1 MTR_7g089040 41.053 285 161 3 148 426 668 951 1.88e-59 209
MS.gene34009.t1 MTR_7g089040 30.942 223 148 3 170 391 391 608 1.07e-26 113
MS.gene34009.t1 MTR_7g088850 40.496 242 144 0 150 391 267 508 2.67e-58 200
MS.gene34009.t1 MTR_7g088850 27.426 237 160 5 172 404 24 252 1.21e-19 91.7
MS.gene34009.t1 MTR_7g096060 40.892 269 151 4 152 415 227 492 1.33e-57 201
MS.gene34009.t1 MTR_7g078570 42.264 265 149 3 154 415 181 444 1.77e-57 199
MS.gene34009.t1 MTR_4g064350 41.132 265 152 3 154 415 309 572 1.03e-56 200
MS.gene34009.t1 MTR_7g088980 41.322 242 142 0 150 391 121 362 1.40e-56 192
MS.gene34009.t1 MTR_0376s0020 41.107 253 146 2 165 415 1 252 6.03e-56 194
MS.gene34009.t1 MTR_7g088980 41.322 242 142 0 150 391 203 444 1.62e-55 191
MS.gene34009.t1 MTR_7g088980 34.211 152 92 4 244 390 28 176 2.77e-14 75.1
MS.gene34009.t1 MTR_5g069780 40.221 271 154 4 153 418 301 568 1.93e-55 196
MS.gene34009.t1 MTR_7g088980 41.322 242 142 0 150 391 271 512 5.95e-55 191
MS.gene34009.t1 MTR_7g088980 34.513 226 140 4 170 390 22 244 6.24e-30 122
MS.gene34009.t1 MTR_7g088980 41.322 242 142 0 150 391 297 538 1.06e-54 191
MS.gene34009.t1 MTR_7g088980 30.952 252 140 5 170 390 22 270 5.94e-25 107
MS.gene34009.t1 MTR_2g095320 40.741 243 136 4 160 401 147 382 2.10e-54 192
MS.gene34009.t1 MTR_2g095320 36.207 290 160 5 115 401 377 644 5.47e-49 177
MS.gene34009.t1 MTR_3g462930 40.152 264 150 4 160 418 299 559 6.69e-53 189
MS.gene34009.t1 MTR_7g088830 38.028 284 169 3 149 426 642 924 6.92e-53 190
MS.gene34009.t1 MTR_7g088830 37.374 198 110 5 204 396 432 620 8.84e-28 116
MS.gene34009.t1 MTR_6g016600 36.545 301 175 5 123 412 267 562 5.86e-50 179
MS.gene34009.t1 MTR_7g089290 40.254 236 132 6 163 393 637 868 6.97e-50 181
MS.gene34009.t1 MTR_7g089290 40.254 236 132 6 163 393 665 896 9.24e-50 181
MS.gene34009.t1 MTR_8g099605 36.029 272 165 3 159 422 157 427 3.99e-49 177
MS.gene34009.t1 MTR_4g067100 38.976 254 142 5 165 409 380 629 7.52e-49 179
MS.gene34009.t1 MTR_4g067100 38.976 254 142 5 165 409 380 629 7.59e-49 179
MS.gene34009.t1 MTR_3g104470 39.098 266 154 3 157 418 212 473 1.14e-48 176
MS.gene34009.t1 MTR_8g099605 37.500 256 151 3 165 412 404 658 1.20e-48 178
MS.gene34009.t1 MTR_1g028390 37.255 255 155 2 161 415 325 574 1.34e-47 174
MS.gene34009.t1 MTR_2g101290 37.247 247 154 1 159 405 409 654 5.09e-47 172
MS.gene34009.t1 MTR_2g101290 37.903 248 151 3 159 405 409 654 7.58e-47 172
MS.gene34009.t1 MTR_3g104480 39.841 251 147 2 168 418 225 471 1.53e-46 171
MS.gene34009.t1 MTR_2g078630 39.744 234 126 5 167 391 68 295 2.05e-45 169
MS.gene34009.t1 MTR_2g078630 39.744 234 126 5 167 391 596 823 6.22e-45 167
MS.gene34009.t1 MTR_2g007010 36.626 243 149 2 150 390 513 752 3.20e-44 165
MS.gene34009.t1 MTR_2g007010 38.723 235 124 5 167 391 240 464 3.06e-39 150
MS.gene34009.t1 MTR_2g086160 38.618 246 131 9 145 382 112 345 3.98e-43 155
MS.gene34009.t1 MTR_3g096000 37.066 259 156 4 156 408 287 544 7.92e-43 160
MS.gene34009.t1 MTR_5g075340 36.863 255 157 2 164 418 228 478 1.43e-42 160
MS.gene34009.t1 MTR_4g053350 37.860 243 141 7 149 388 111 346 2.88e-42 154
MS.gene34009.t1 MTR_3g023900 31.792 346 172 7 97 409 485 799 3.64e-42 159
MS.gene34009.t1 MTR_3g023900 32.941 255 157 5 167 409 236 488 6.61e-34 135
MS.gene34009.t1 MTR_8g099065 36.522 230 140 3 164 391 533 758 4.17e-42 159
MS.gene34009.t1 MTR_3g092070 38.627 233 131 6 164 391 80 305 4.27e-42 151
MS.gene34009.t1 MTR_4g053350 37.860 243 141 7 149 388 111 346 4.41e-42 154
MS.gene34009.t1 MTR_3g092070 38.627 233 131 6 164 391 80 305 4.97e-42 152
MS.gene34009.t1 MTR_2g086160 38.618 246 131 9 145 382 112 345 7.46e-42 153
MS.gene34009.t1 MTR_3g092080 37.768 233 133 6 164 391 83 308 3.79e-41 150
MS.gene34009.t1 MTR_3g092080 37.768 233 133 6 164 391 83 308 3.86e-41 149
MS.gene34009.t1 MTR_4g011810 37.647 255 138 7 151 391 224 471 4.28e-41 153
MS.gene34009.t1 MTR_5g009840 35.371 229 142 3 165 391 516 740 1.46e-38 148
MS.gene34009.t1 MTR_6g033740 33.101 287 176 6 115 391 443 723 8.52e-38 146
MS.gene34009.t1 MTR_1g099470 36.957 230 136 5 165 391 434 657 2.51e-37 144
MS.gene34009.t1 MTR_1g088730 35.931 231 139 5 165 391 932 1157 3.02e-37 145
MS.gene34009.t1 MTR_3g023890 35.206 267 138 7 150 390 370 627 3.20e-37 144
MS.gene34009.t1 MTR_3g023890 33.182 220 125 7 174 381 103 312 2.48e-27 115
MS.gene34009.t1 MTR_4g096870 34.025 241 152 5 153 391 107 342 3.69e-37 140
MS.gene34009.t1 MTR_1g044600 34.082 267 135 4 152 415 152 380 1.58e-36 140
MS.gene34009.t1 MTR_1g101870 36.364 231 139 5 164 391 556 781 2.27e-36 142
MS.gene34009.t1 MTR_7g075520 34.000 250 138 7 154 391 201 435 2.39e-36 139
MS.gene34009.t1 MTR_3g104490 34.767 279 141 6 144 418 193 434 2.54e-36 141
MS.gene34009.t1 MTR_1g101870 36.364 231 139 5 164 391 504 729 2.59e-36 142
MS.gene34009.t1 MTR_5g075360 33.209 268 171 3 154 417 51 314 3.10e-36 139
MS.gene34009.t1 MTR_1g088750 35.498 231 140 5 165 391 938 1163 3.12e-36 142
MS.gene34009.t1 MTR_1g088750 35.498 231 140 5 165 391 889 1114 3.22e-36 142
MS.gene34009.t1 MTR_5g075360 34.000 250 161 2 168 417 19 264 5.50e-36 138
MS.gene34009.t1 MTR_5g075360 33.209 268 171 3 154 417 227 490 1.14e-35 139
MS.gene34009.t1 MTR_5g075360 34.000 250 161 2 168 417 195 440 2.83e-35 138
MS.gene34009.t1 MTR_3g089100 34.956 226 138 5 165 386 897 1117 3.57e-35 139
MS.gene34009.t1 MTR_3g089100 34.956 226 138 5 165 386 902 1122 3.89e-35 139
MS.gene34009.t1 MTR_3g089100 34.956 226 138 5 165 386 931 1151 4.73e-35 138
MS.gene34009.t1 MTR_8g469460 33.453 278 136 5 144 417 193 425 4.87e-35 137
MS.gene34009.t1 MTR_4g088885 36.255 251 129 6 191 413 249 496 1.08e-34 137
MS.gene34009.t1 MTR_8g056860 34.348 230 137 3 188 408 492 716 1.23e-34 137
MS.gene34009.t1 MTR_6g023875 32.812 256 150 9 146 391 363 606 2.02e-34 135
MS.gene34009.t1 MTR_1g099480 35.111 225 138 5 165 386 468 687 3.46e-34 135
MS.gene34009.t1 MTR_7g088980 33.471 242 118 1 150 391 271 469 7.18e-34 133
MS.gene34009.t1 MTR_7g088980 34.513 226 140 4 170 390 22 244 2.90e-30 122
MS.gene34009.t1 MTR_7g088980 33.471 242 118 1 150 391 297 495 9.18e-34 133
MS.gene34009.t1 MTR_7g088980 30.952 252 140 5 170 390 22 270 3.57e-25 108
MS.gene34009.t1 MTR_5g074850 35.749 207 129 2 197 402 536 739 4.25e-32 129
MS.gene34009.t1 MTR_6g023855 31.557 244 140 8 161 391 242 471 3.98e-31 125
MS.gene34009.t1 MTR_8g099065 38.953 172 99 3 164 333 533 700 1.73e-30 124
MS.gene34009.t1 MTR_4g112600 64.103 78 27 1 169 245 4 81 2.89e-29 109
MS.gene34009.t1 MTR_2g024440 31.034 232 141 6 164 385 213 435 7.54e-29 118
MS.gene34009.t1 MTR_2g024440 31.034 232 141 6 164 385 296 518 1.20e-28 118
MS.gene34009.t1 MTR_2g024440 31.034 232 141 6 164 385 295 517 1.24e-28 118
MS.gene34009.t1 MTR_4g074920 32.743 226 125 7 165 386 669 871 9.17e-28 116
MS.gene34009.t1 MTR_1g099480 37.791 172 100 4 165 333 468 635 1.40e-26 112
MS.gene34009.t1 MTR_6g023865 28.028 289 158 10 159 409 152 428 3.34e-25 107
MS.gene34009.t1 MTR_1g080430 33.508 191 121 6 161 348 673 860 4.69e-21 96.3
MS.gene34009.t1 MTR_1g080430 33.508 191 121 6 161 348 673 860 5.44e-21 96.3
MS.gene34009.t1 MTR_4g083460 33.889 180 96 5 167 327 839 1014 7.08e-20 92.8
MS.gene34009.t1 MTR_8g074160 84.444 45 7 0 141 185 100 144 9.08e-19 83.2
MS.gene34009.t1 MTR_8g074130 52.174 92 17 3 311 400 25 91 1.44e-17 77.8
MS.gene34009.t1 MTR_6g023845 24.742 291 150 10 146 409 97 345 4.01e-16 79.7
MS.gene34009.t1 MTR_8g018640 52.381 84 21 2 317 400 78 142 1.92e-15 73.6
MS.gene34009.t1 MTR_6g005760 27.799 259 151 10 105 351 144 378 1.14e-14 76.3
MS.gene34009.t1 MTR_6g005760 27.799 259 151 10 105 351 272 506 1.33e-14 76.3
MS.gene34009.t1 MTR_4g077880 31.053 190 111 6 175 351 330 512 7.24e-14 73.9
MS.gene34009.t1 MTR_5g020530 34.483 145 87 5 201 344 387 524 1.23e-13 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34009.t1 AT1G53750 96.244 426 16 0 1 426 1 426 0.0 845
MS.gene34009.t1 AT1G53780 87.023 393 50 1 33 425 227 618 0.0 714
MS.gene34009.t1 AT1G53780 87.023 393 50 1 33 425 206 597 0.0 713
MS.gene34009.t1 AT1G53780 87.023 393 50 1 33 425 206 597 0.0 713
MS.gene34009.t1 AT1G53780 87.023 393 50 1 33 425 205 596 0.0 713
MS.gene34009.t1 AT5G19990 53.468 346 150 4 73 411 6 347 4.16e-120 354
MS.gene34009.t1 AT5G19990 49.612 387 181 6 26 411 32 405 7.26e-120 355
MS.gene34009.t1 AT5G19990 49.612 387 181 6 26 411 32 405 7.26e-120 355
MS.gene34009.t1 AT5G20000 53.602 347 150 4 72 411 63 405 2.88e-119 354
MS.gene34009.t1 AT1G45000 48.297 323 166 1 100 422 71 392 1.42e-112 336
MS.gene34009.t1 AT5G43010 48.297 323 166 1 100 422 71 392 1.98e-112 336
MS.gene34009.t1 AT4G29040 46.628 341 174 3 85 423 109 443 1.40e-105 320
MS.gene34009.t1 AT2G20140 46.628 341 174 3 85 423 109 443 1.95e-105 319
MS.gene34009.t1 AT3G05530 52.542 295 137 1 115 409 121 412 1.33e-104 317
MS.gene34009.t1 AT1G09100 52.542 295 137 1 115 409 120 411 1.07e-103 314
MS.gene34009.t1 AT5G58290 54.864 257 116 0 146 402 133 389 1.62e-103 313
MS.gene34009.t1 AT1G45000 47.826 207 108 0 100 306 71 277 1.35e-68 221
MS.gene34009.t1 AT5G42270 44.094 254 141 1 165 418 247 499 1.45e-64 220
MS.gene34009.t1 AT5G15250 39.777 269 161 1 146 414 202 469 2.12e-63 216
MS.gene34009.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene34009.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene34009.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene34009.t1 AT2G30950 39.925 268 160 1 147 414 210 476 7.73e-63 215
MS.gene34009.t1 AT1G50250 42.913 254 144 1 165 418 259 511 9.36e-63 215
MS.gene34009.t1 AT3G53230 42.629 251 144 0 151 401 464 714 1.53e-61 213
MS.gene34009.t1 AT3G53230 42.128 235 132 3 160 393 199 430 3.50e-57 201
MS.gene34009.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene34009.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene34009.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene34009.t1 AT5G03340 43.154 241 137 0 151 391 463 703 2.79e-60 210
MS.gene34009.t1 AT5G03340 41.532 248 140 4 160 405 198 442 1.85e-58 205
MS.gene34009.t1 AT5G15250 36.644 292 161 2 146 414 202 492 1.53e-59 202
MS.gene34009.t1 AT3G09840 41.564 243 138 3 164 405 203 442 4.31e-59 206
MS.gene34009.t1 AT3G09840 43.254 252 142 1 151 401 463 714 4.44e-59 206
MS.gene34009.t1 AT1G07510 41.509 265 151 3 154 415 313 576 1.27e-58 205
MS.gene34009.t1 AT3G56690 43.443 244 133 2 149 390 705 945 2.02e-56 201
MS.gene34009.t1 AT3G56690 37.220 223 135 3 170 391 387 605 5.80e-41 155
MS.gene34009.t1 AT2G29080 41.887 265 151 2 153 415 307 570 4.15e-56 198
MS.gene34009.t1 AT3G47060 41.985 262 144 4 165 421 322 580 5.36e-56 198
MS.gene34009.t1 AT5G58870 41.603 262 145 4 165 421 326 584 3.41e-55 196
MS.gene34009.t1 AT1G05910 40.000 245 136 4 164 401 377 617 8.32e-51 184
MS.gene34009.t1 AT3G02450 38.346 266 158 3 160 423 326 587 1.18e-50 181
MS.gene34009.t1 AT2G03670 39.506 243 146 1 150 391 268 510 3.76e-50 179
MS.gene34009.t1 AT2G03670 31.667 240 157 3 169 402 23 261 1.38e-33 133
MS.gene34009.t1 AT1G03000 34.653 303 183 8 102 395 588 884 9.67e-50 181
MS.gene34009.t1 AT5G53170 37.255 255 155 2 161 415 355 604 1.11e-48 177
MS.gene34009.t1 AT5G53540 40.343 233 127 6 164 391 83 308 4.50e-48 169
MS.gene34009.t1 AT2G26140 39.286 252 149 2 167 418 226 473 5.89e-48 174
MS.gene34009.t1 AT4G23940 36.364 264 155 3 159 412 421 681 2.30e-47 174
MS.gene34009.t1 AT3G16290 37.247 247 154 1 159 405 401 646 8.48e-46 169
MS.gene34009.t1 AT3G15120 40.260 231 127 4 167 390 718 944 3.35e-45 168
MS.gene34009.t1 AT3G15120 40.260 231 127 4 167 390 728 954 3.58e-45 168
MS.gene34009.t1 AT4G27680 39.914 233 128 6 164 391 80 305 6.75e-45 160
MS.gene34009.t1 AT5G64580 38.224 259 153 5 156 408 304 561 7.58e-44 164
MS.gene34009.t1 AT1G80350 38.843 242 133 5 159 391 230 465 2.10e-41 154
MS.gene34009.t1 AT1G50140 32.716 324 182 9 91 386 594 909 4.76e-41 156
MS.gene34009.t1 AT1G50140 32.716 324 182 9 91 386 594 909 4.76e-41 156
MS.gene34009.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene34009.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene34009.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene34009.t1 AT3G01610 36.546 249 137 3 157 391 222 463 1.39e-40 154
MS.gene34009.t1 AT3G01610 37.991 229 137 3 163 390 523 747 2.09e-38 148
MS.gene34009.t1 AT3G01610 36.546 249 137 3 157 391 222 463 1.48e-40 154
MS.gene34009.t1 AT3G01610 37.991 229 137 3 163 390 523 747 2.09e-38 148
MS.gene34009.t1 AT5G08470 36.889 225 139 1 167 391 843 1064 2.72e-40 154
MS.gene34009.t1 AT5G08470 36.889 225 139 1 167 391 834 1055 2.74e-40 154
MS.gene34009.t1 AT4G28000 35.878 262 149 7 143 391 483 738 2.36e-39 150
MS.gene34009.t1 AT1G64110 35.193 233 145 3 161 391 514 742 2.96e-39 150
MS.gene34009.t1 AT1G64110 35.193 233 145 3 161 391 514 742 2.96e-39 150
MS.gene34009.t1 AT4G28000 36.681 229 138 4 165 391 517 740 2.99e-39 150
MS.gene34009.t1 AT1G64110 35.193 233 145 3 161 391 509 737 3.13e-39 150
MS.gene34009.t1 AT1G64110 35.193 233 145 3 161 391 512 740 3.21e-39 150
MS.gene34009.t1 AT1G64110 35.193 233 145 3 161 391 512 740 3.21e-39 150
MS.gene34009.t1 AT4G28000 36.681 229 138 4 165 391 517 740 3.60e-39 150
MS.gene34009.t1 AT3G19740 32.716 324 182 9 91 386 606 921 7.45e-39 149
MS.gene34009.t1 AT2G34560 32.917 240 157 3 153 391 88 324 1.15e-38 144
MS.gene34009.t1 AT2G34560 32.917 240 157 3 153 391 97 333 1.50e-38 144
MS.gene34009.t1 AT2G27600 36.100 241 144 7 145 382 109 342 1.68e-38 144
MS.gene34009.t1 AT5G52882 34.363 259 153 6 145 391 484 737 1.75e-37 145
MS.gene34009.t1 AT4G02480 35.498 231 140 5 165 391 960 1185 4.43e-37 144
MS.gene34009.t1 AT2G45500 33.884 242 149 6 154 391 69 303 3.88e-36 136
MS.gene34009.t1 AT2G45500 33.884 242 149 6 154 391 69 303 3.88e-36 136
MS.gene34009.t1 AT4G24860 35.345 232 141 5 164 391 816 1042 5.60e-36 141
MS.gene34009.t1 AT4G24860 35.345 232 141 5 164 391 789 1015 5.70e-36 141
MS.gene34009.t1 AT1G02890 33.462 260 161 7 165 419 941 1193 6.06e-36 141
MS.gene34009.t1 AT1G79560 35.652 230 134 3 188 408 512 736 6.14e-36 141
MS.gene34009.t1 AT4G24860 35.345 232 141 5 164 391 814 1040 6.44e-36 141
MS.gene34009.t1 AT4G24860 35.345 232 141 5 164 391 812 1038 6.62e-36 141
MS.gene34009.t1 AT1G79560 35.652 230 134 3 188 408 512 736 7.06e-36 140
MS.gene34009.t1 AT1G79560 35.652 230 134 3 188 408 512 736 8.07e-36 140
MS.gene34009.t1 AT2G45500 33.884 242 149 6 154 391 202 436 2.38e-35 136
MS.gene34009.t1 AT2G45500 33.884 242 149 6 154 391 206 440 2.74e-35 136
MS.gene34009.t1 AT2G45500 33.884 242 149 6 154 391 212 446 3.43e-35 136
MS.gene34009.t1 AT2G03670 31.667 240 157 3 169 402 23 261 3.02e-34 132
MS.gene34009.t1 AT2G03670 39.355 155 93 1 150 303 268 422 6.73e-28 115
MS.gene34009.t1 AT4G04910 35.223 247 129 6 191 409 239 482 1.53e-33 133
MS.gene34009.t1 AT3G27120 30.742 283 170 8 146 409 381 656 1.72e-33 133
MS.gene34009.t1 AT4G04180 30.603 232 142 6 164 385 310 532 1.10e-26 112
MS.gene34009.t1 AT4G04180 30.603 232 142 6 164 385 315 537 1.21e-26 112
MS.gene34009.t1 AT1G62130 30.417 240 134 7 165 397 743 956 3.58e-26 112
MS.gene34009.t1 AT1G62130 30.417 240 134 7 165 397 750 963 3.93e-26 112
MS.gene34009.t1 AT1G02890 30.000 260 142 8 165 419 941 1165 1.60e-23 104
MS.gene34009.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.24e-23 102
MS.gene34009.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.66e-23 102
MS.gene34009.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.66e-23 102
MS.gene34009.t1 AT5G08470 36.486 148 91 1 167 314 843 987 8.40e-22 99.0
MS.gene34009.t1 AT3G04340 33.333 204 129 5 150 348 763 964 5.72e-20 93.2
MS.gene34009.t1 AT5G16930 32.895 152 94 5 201 351 397 541 2.70e-13 72.4
MS.gene34009.t1 AT2G18330 33.793 145 88 5 201 344 384 521 5.54e-13 71.2
MS.gene34009.t1 AT3G03060 32.278 158 99 5 195 351 379 529 8.71e-13 70.5

Find 96 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGTAGACCATATATT+TGG 0.125735 1.4:+74345578 None:intergenic
CTTCACATTGATAACATATT+TGG 0.151421 1.4:+74347451 None:intergenic
GATGGTTCGTGAACTGTTTC+AGG 0.169232 1.4:-74346675 MS.gene34009:intron
TTGGATCGTAAAGTTGAATT+TGG 0.208227 1.4:-74346041 MS.gene34009:CDS
AGGAATCTGGATCTGATATT+TGG 0.262951 1.4:+74347082 None:intergenic
CCAAAGGGTGTGCTTTGTTA+TGG 0.289972 1.4:-74346815 MS.gene34009:CDS
TGGGAGTTGCACTGAACTTC+TGG 0.300224 1.4:+74345598 None:intergenic
TATTTGGCATCTTCAGAGTT+TGG 0.307446 1.4:+74347467 None:intergenic
ATGTTCTTACCAGTGGAGTT+TGG 0.317080 1.4:+74345918 None:intergenic
ATCCAGCACTATTGCGGCCT+GGG 0.338212 1.4:-74346067 MS.gene34009:CDS
GATATCCCTTTCACAGTTCA+TGG 0.347039 1.4:+74345968 None:intergenic
TGATGATTTCAGTTTGTTGT+TGG 0.350814 1.4:-74347273 MS.gene34009:intron
AGGAACTGGCAAAACACTTT+TGG 0.351355 1.4:-74346786 MS.gene34009:CDS
GCAGGAGGAGCAGCCTCTTC+AGG 0.355558 1.4:-74347606 MS.gene34009:intron
TGTTCTTACCAGTGGAGTTT+GGG 0.362266 1.4:+74345919 None:intergenic
TTCCACTTTACGCAGGGTTT+GGG 0.364518 1.4:-74348116 MS.gene34009:intron
CAGTGCAACTCCCAAATATA+TGG 0.366186 1.4:-74345589 MS.gene34009:CDS
CTCTGTTACAGTCTTCCTTC+GGG 0.367385 1.4:+74345662 None:intergenic
CCAAGCTTGACAAATTTCTC+TGG 0.370248 1.4:+74346848 None:intergenic
TCTCTGTTACAGTCTTCCTT+CGG 0.371200 1.4:+74345661 None:intergenic
TCTCTCTAGGAGCTGATATA+AGG 0.379334 1.4:-74345722 MS.gene34009:intron
TTTGATGAAATTGATGCAAT+TGG 0.393532 1.4:-74346533 MS.gene34009:CDS
GATCCAGCACTATTGCGGCC+TGG 0.393592 1.4:-74346068 MS.gene34009:CDS
GATGATTTCAGTTTGTTGTT+GGG 0.401893 1.4:-74347272 MS.gene34009:intron
GGAGAAGGAAATTAAAGATA+TGG 0.402101 1.4:-74348066 MS.gene34009:CDS
CCAGAGAAATTTGTCAAGCT+TGG 0.404730 1.4:-74346848 MS.gene34009:CDS
CGCCCAGGCCGCAATAGTGC+TGG 0.424492 1.4:+74346065 None:intergenic
TGTTATGGTCCACCAGGAAC+TGG 0.429324 1.4:-74346800 MS.gene34009:CDS
GAAATTGTGAATCAGCTTGA+TGG 0.438120 1.4:-74346452 MS.gene34009:CDS
CAATTGTAGACCATATATTT+GGG 0.438846 1.4:+74345579 None:intergenic
CCATAACAAAGCACACCCTT+TGG 0.448130 1.4:+74346815 None:intergenic
TTTCAGTTTGTTGTTGGGCT+AGG 0.455935 1.4:-74347267 MS.gene34009:intron
ACATCATTATATGTCACATC+TGG 0.470282 1.4:+74347008 None:intergenic
TAGAGGAAGGAATGCGTGTT+GGG 0.476572 1.4:-74347221 MS.gene34009:intron
ACTATTGCGGCCTGGGCGAT+TGG 0.479348 1.4:-74346060 MS.gene34009:CDS
GGTATCAAGGAGTCTGATAC+TGG 0.483066 1.4:-74347677 MS.gene34009:CDS
TTTCTCTTCAACTGTCATCA+TGG 0.485919 1.4:+74347031 None:intergenic
TGTTGTAATAATAGGTATCA+AGG 0.499629 1.4:-74347690 MS.gene34009:intron
TGTGTCCTACTCTCTAGATC+AGG 0.503167 1.4:+74346014 None:intergenic
ATTCCTTCCTCTATGTCGGT+GGG 0.505296 1.4:+74347231 None:intergenic
CGGCTTTGCCCAAACTCCAC+TGG 0.507108 1.4:-74345927 MS.gene34009:intron
TTCTGATAAGCAAATGATGC+AGG 0.509435 1.4:-74347624 MS.gene34009:CDS
AGTGCTGGATCCAAAGTGTC+AGG 0.511055 1.4:+74346080 None:intergenic
TTACAGTCTTCCTTCGGGCA+CGG 0.513244 1.4:+74345667 None:intergenic
TAATGATGTTGGTGGTTGTA+AGG 0.514610 1.4:-74346994 MS.gene34009:CDS
CGAGAACCATGAACTGTGAA+AGG 0.515979 1.4:-74345974 MS.gene34009:CDS
GATGAAATTGATGCAATTGG+AGG 0.529693 1.4:-74346530 MS.gene34009:CDS
GTTCAGAAATATGTTGGTGA+GGG 0.534000 1.4:-74346704 MS.gene34009:CDS
CATTCCTTCCTCTATGTCGG+TGG 0.534424 1.4:+74347230 None:intergenic
GCAGTGAATAAAGTCATCAA+AGG 0.537155 1.4:-74345624 MS.gene34009:CDS
TTCCTTCCTCTATGTCGGTG+GGG 0.540944 1.4:+74347232 None:intergenic
GAAACAAGATCCCACTGGCT+TGG 0.541173 1.4:+74347644 None:intergenic
TCCTTCCTCTATGTCGGTGG+GGG 0.543622 1.4:+74347233 None:intergenic
AAATTGTGAATCAGCTTGAT+GGG 0.544829 1.4:-74346451 MS.gene34009:CDS
GTGCTTTGTTATGGTCCACC+AGG 0.550033 1.4:-74346806 MS.gene34009:CDS
AGGAGTGTGTGCACTGAAGC+TGG 0.550291 1.4:-74345702 MS.gene34009:CDS
TGTTGTTGGGCTAGGAGACA+AGG 0.552446 1.4:-74347259 MS.gene34009:CDS
AAATTTCTCTGGATGAAGCA+TGG 0.554156 1.4:+74346859 None:intergenic
AATTTCTCTGGATGAAGCAT+GGG 0.557842 1.4:+74346860 None:intergenic
TGACTTTATTCACTGCATCA+AGG 0.571386 1.4:+74345631 None:intergenic
GCCGAGCAAGAAGCTCAAAA+CGG 0.571922 1.4:+74345946 None:intergenic
CAGTGAATAAAGTCATCAAA+GGG 0.573521 1.4:-74345623 MS.gene34009:CDS
CGATTTGACGATGGTGTTGG+TGG 0.576969 1.4:-74346503 MS.gene34009:CDS
CTTGGAATTGATCCTCCAAA+GGG 0.577450 1.4:-74346830 MS.gene34009:CDS
TAACAAAGCACACCCTTTGG+AGG 0.580223 1.4:+74346818 None:intergenic
GAACTTGTTCAGAAATATGT+TGG 0.580468 1.4:-74346710 MS.gene34009:CDS
ACTGTCATCATGGTAACACT+TGG 0.582359 1.4:+74347041 None:intergenic
ACTTTACGATCCAATCGCCC+AGG 0.582511 1.4:+74346050 None:intergenic
ACGCATTCCTTCCTCTATGT+CGG 0.584785 1.4:+74347227 None:intergenic
TCCTACTCTCTAGATCAGGC+AGG 0.591282 1.4:+74346018 None:intergenic
GTCTAGCTACACCAAGCCAG+TGG 0.594456 1.4:-74347655 MS.gene34009:CDS
AGCGATATCATCCTCATCGA+GGG 0.595291 1.4:+74349469 None:intergenic
GCACGATTTGACGATGGTGT+TGG 0.598895 1.4:-74346506 MS.gene34009:CDS
ATAGAGGAAGGAATGCGTGT+TGG 0.599136 1.4:-74347222 MS.gene34009:CDS
GCTTGGAATTGATCCTCCAA+AGG 0.599971 1.4:-74346831 MS.gene34009:CDS
GAGAACCATGAACTGTGAAA+GGG 0.600004 1.4:-74345973 MS.gene34009:CDS
CTTTGGATCCAGCACTATTG+CGG 0.600136 1.4:-74346073 MS.gene34009:CDS
TGTTCAGAAATATGTTGGTG+AGG 0.604104 1.4:-74346705 MS.gene34009:CDS
AGTTCTATTAGCAACAGCCC+TGG 0.605396 1.4:+74346763 None:intergenic
TTCAGAAATATGTTGGTGAG+GGG 0.607694 1.4:-74346703 MS.gene34009:CDS
CTTGATGGGTTTGATGCTCG+AGG 0.608897 1.4:-74346437 MS.gene34009:CDS
TGGTGTTGGTGGTGATAATG+AGG 0.617118 1.4:-74346492 MS.gene34009:CDS
TCAGAAATATGTTGGTGAGG+GGG 0.626431 1.4:-74346702 MS.gene34009:CDS
TATCAGAAACAAGATCCCAC+TGG 0.635585 1.4:+74347639 None:intergenic
GTGACATATAATGATGTTGG+TGG 0.636496 1.4:-74347002 MS.gene34009:CDS
GATGTGACATATAATGATGT+TGG 0.638506 1.4:-74347005 MS.gene34009:CDS
TGATAAGCAAATGATGCAGG+AGG 0.645808 1.4:-74347621 MS.gene34009:CDS
CAATGTGAAGCAGATTGCAA+AGG 0.648835 1.4:-74347438 MS.gene34009:intron
GCCTGCCTGATCTAGAGAGT+AGG 0.658383 1.4:-74346019 MS.gene34009:CDS
TCTAGCTACACCAAGCCAGT+GGG 0.668948 1.4:-74347654 MS.gene34009:CDS
GCGATATCATCCTCATCGAG+GGG 0.669572 1.4:+74349470 None:intergenic
TGTATGCTATCCGTGCCCGA+AGG 0.670697 1.4:-74345677 MS.gene34009:CDS
GAGCGATATCATCCTCATCG+AGG 0.687687 1.4:+74349468 None:intergenic
CGATATCATCCTCATCGAGG+GGG 0.719492 1.4:+74349471 None:intergenic
GGAGGTGCACGATTTGACGA+TGG 0.742439 1.4:-74346512 MS.gene34009:CDS
AAGAAAGTGAATGACTTGTG+TGG 0.760698 1.4:-74348041 MS.gene34009:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTGCTTTTATTATTTAT+AGG - chr1.4:74347549-74347568 MS.gene34009:intron 15.0%
!!! TTATCATAAGAGTTATTTTT+TGG + chr1.4:74347908-74347927 None:intergenic 15.0%
!! AAAACAAAGCTATATAAAAC+AGG + chr1.4:74348456-74348475 None:intergenic 20.0%
!! AATTGAAATAGAACAGAAAT+TGG + chr1.4:74345703-74345722 None:intergenic 20.0%
!! ATTGAAATAGAACAGAAATT+GGG + chr1.4:74345702-74345721 None:intergenic 20.0%
!! CAAAGTTTGTAATTTCATAT+AGG - chr1.4:74345945-74345964 MS.gene34009:CDS 20.0%
!! CAAATTTATTCTTAAACTGA+AGG - chr1.4:74347263-74347282 MS.gene34009:CDS 20.0%
!! CTTCAGTTTAAGAATAAATT+TGG + chr1.4:74347265-74347284 None:intergenic 20.0%
!! GAATTAATGAAATTCGTTTA+AGG - chr1.4:74345800-74345819 MS.gene34009:intron 20.0%
!! TAGATAATTGGATATTATGT+AGG - chr1.4:74347292-74347311 MS.gene34009:intron 20.0%
!! TTACAAAAAAAAATTACGCT+CGG - chr1.4:74347781-74347800 MS.gene34009:intron 20.0%
!! TTCAATAAATGACCATATTT+AGG + chr1.4:74347579-74347598 None:intergenic 20.0%
!!! CAATTGTGGATTTTTTTTTT+GGG - chr1.4:74345723-74345742 MS.gene34009:intron 20.0%
!!! TATTTATCTTAGAGTATTCT+TGG + chr1.4:74346038-74346057 None:intergenic 20.0%
!!! TCAATTGTGGATTTTTTTTT+TGG - chr1.4:74345722-74345741 MS.gene34009:intron 20.0%
!!! TTACATCTTTTATTTTCTCT+CGG - chr1.4:74347154-74347173 MS.gene34009:intron 20.0%
!!! TTTTTAATACTTGTGGAATA+AGG + chr1.4:74347007-74347026 None:intergenic 20.0%
! AAAATGAAAATAGACAGCAA+AGG + chr1.4:74347201-74347220 None:intergenic 25.0%
! AAATGAAAATAGACAGCAAA+GGG + chr1.4:74347200-74347219 None:intergenic 25.0%
! AAGTATTAAAAAAGTGGAGA+AGG - chr1.4:74347015-74347034 MS.gene34009:CDS 25.0%
! AATATGGTCATTTATTGAAC+AGG - chr1.4:74347580-74347599 MS.gene34009:intron 25.0%
! ACAGTAAAATAGAGAACAAA+GGG + chr1.4:74348741-74348760 None:intergenic 25.0%
! AGAGAAATATACCCAATTAA+GGG + chr1.4:74347240-74347259 None:intergenic 25.0%
! ATGAAATATTAAGAGACATG+TGG - chr1.4:74346608-74346627 MS.gene34009:intron 25.0%
! ATGTTAAGAGTTAAAGTTGT+TGG - chr1.4:74345835-74345854 MS.gene34009:intron 25.0%
! CAACTTTAATTAACAGAATC+AGG + chr1.4:74345755-74345774 None:intergenic 25.0%
! CAATTGTAGACCATATATTT+GGG + chr1.4:74349520-74349539 None:intergenic 25.0%
! CTTAATGAAACCTATTCATT+GGG + chr1.4:74346710-74346729 None:intergenic 25.0%
! GTTCTATTTCAATTCAATTG+TGG - chr1.4:74345709-74345728 MS.gene34009:CDS 25.0%
! TAACTTCCTGTTGTAATAAT+AGG - chr1.4:74347398-74347417 MS.gene34009:intron 25.0%
! TACAGTAAAATAGAGAACAA+AGG + chr1.4:74348742-74348761 None:intergenic 25.0%
! TCAATTGTAGACCATATATT+TGG + chr1.4:74349521-74349540 None:intergenic 25.0%
! TCTTAATGAAACCTATTCAT+TGG + chr1.4:74346711-74346730 None:intergenic 25.0%
! TGTTAAGAGTTAAAGTTGTT+GGG - chr1.4:74345836-74345855 MS.gene34009:intron 25.0%
! TGTTGTAATAATAGGTATCA+AGG - chr1.4:74347406-74347425 MS.gene34009:intron 25.0%
! TTCCACAAGTATTAAAAAAG+TGG - chr1.4:74347009-74347028 MS.gene34009:CDS 25.0%
! TTCCATATTTCACATAACAA+CGG - chr1.4:74348164-74348183 MS.gene34009:intron 25.0%
! TTGATACCTATTATTACAAC+AGG + chr1.4:74347407-74347426 None:intergenic 25.0%
! TTTATAGGAATGCCTAAATA+TGG - chr1.4:74347564-74347583 MS.gene34009:intron 25.0%
! TTTGATGAAATTGATGCAAT+TGG - chr1.4:74348563-74348582 MS.gene34009:intron 25.0%
!! AAAAAGTATATTGGTCAGAA+AGG + chr1.4:74349352-74349371 None:intergenic 25.0%
!! AATGAAATTCGTTTAAGGTA+GGG - chr1.4:74345805-74345824 MS.gene34009:intron 25.0%
!! AGAGAGAACAAAAAGTATAT+TGG + chr1.4:74349361-74349380 None:intergenic 25.0%
!! ATACTGAAGTACTTAAAAGA+TGG + chr1.4:74349243-74349262 None:intergenic 25.0%
!! ATATGCTGTTTAATATGACA+AGG - chr1.4:74347756-74347775 MS.gene34009:intron 25.0%
!! CTTCACATTGATAACATATT+TGG + chr1.4:74347648-74347667 None:intergenic 25.0%
!! GGTTGGTTATTACTATTATT+TGG - chr1.4:74348711-74348730 MS.gene34009:intron 25.0%
!! TAATGAAATTCGTTTAAGGT+AGG - chr1.4:74345804-74345823 MS.gene34009:intron 25.0%
!!! AACTGATGCTTGTTTTATAA+GGG - chr1.4:74348352-74348371 MS.gene34009:intron 25.0%
!!! AATGCTTTTTCTATGATCAA+TGG - chr1.4:74346896-74346915 MS.gene34009:intron 25.0%
!!! ATATACTTTTTGTTCTCTCT+AGG - chr1.4:74349361-74349380 MS.gene34009:intron 25.0%
!!! GAATTTTTAATTTCTCTGCA+AGG - chr1.4:74348202-74348221 MS.gene34009:intron 25.0%
!!! GCTGTCTATTTTCATTTTTA+TGG - chr1.4:74347203-74347222 MS.gene34009:intron 25.0%
!!! TATGAGAAAAAAAGAGCATT+TGG + chr1.4:74348825-74348844 None:intergenic 25.0%
!!! TTTTAAGTACTTCAGTATTC+TGG - chr1.4:74349245-74349264 MS.gene34009:intron 25.0%
AAATGCTTTACAACATTCTG+CGG + chr1.4:74346223-74346242 None:intergenic 30.0%
AAATTGTGAATCAGCTTGAT+GGG - chr1.4:74348645-74348664 MS.gene34009:intron 30.0%
AATGAAAATAGACAGCAAAG+GGG + chr1.4:74347199-74347218 None:intergenic 30.0%
ACATAACAACGGAAATGAAT+TGG - chr1.4:74348175-74348194 MS.gene34009:intron 30.0%
ACATCATTATATGTCACATC+TGG + chr1.4:74348091-74348110 None:intergenic 30.0%
AGAAAAAAAATCACCTGAAG+AGG + chr1.4:74347506-74347525 None:intergenic 30.0%
ATTGTTAATATACCGTGATG+CGG - chr1.4:74345917-74345936 MS.gene34009:intron 30.0%
CAGTGAATAAAGTCATCAAA+GGG - chr1.4:74349473-74349492 MS.gene34009:CDS 30.0%
GAGAGAAATATACCCAATTA+AGG + chr1.4:74347241-74347260 None:intergenic 30.0%
GATAATGAAAGGCAAAATCA+AGG - chr1.4:74348865-74348884 MS.gene34009:intron 30.0%
GATGTGACATATAATGATGT+TGG - chr1.4:74348091-74348110 MS.gene34009:CDS 30.0%
GGAGAAGGAAATTAAAGATA+TGG - chr1.4:74347030-74347049 MS.gene34009:CDS 30.0%
GTGTGTAACTATGTATTTAG+TGG - chr1.4:74346751-74346770 MS.gene34009:CDS 30.0%
GTTGTTACTCTTCTTTCTTT+GGG + chr1.4:74347938-74347957 None:intergenic 30.0%
TAAGACAAACCACTATGAAT+GGG + chr1.4:74347331-74347350 None:intergenic 30.0%
TGAAGGAACAACTAGATAAT+TGG - chr1.4:74347280-74347299 MS.gene34009:intron 30.0%
TGGGTACACTTAGTAATTAA+AGG + chr1.4:74346691-74346710 None:intergenic 30.0%
TGTTGTTACTCTTCTTTCTT+TGG + chr1.4:74347939-74347958 None:intergenic 30.0%
TTATCATTGTTTCCATCATC+TGG - chr1.4:74348475-74348494 MS.gene34009:intron 30.0%
TTCCGTTGTTATGTGAAATA+TGG + chr1.4:74348169-74348188 None:intergenic 30.0%
TTGGATCGTAAAGTTGAATT+TGG - chr1.4:74349055-74349074 MS.gene34009:intron 30.0%
TTGTAAGTGATCCCTTAATT+GGG - chr1.4:74347226-74347245 MS.gene34009:CDS 30.0%
TTTGTGTAAATTGATGCTTG+TGG - chr1.4:74345864-74345883 MS.gene34009:intron 30.0%
! AATGTTGTAAAGCATTTGGA+AGG - chr1.4:74346226-74346245 MS.gene34009:intron 30.0%
! ATGTTGTAAAGCATTTGGAA+GGG - chr1.4:74346227-74346246 MS.gene34009:intron 30.0%
! GAACTTGTTCAGAAATATGT+TGG - chr1.4:74348386-74348405 MS.gene34009:intron 30.0%
! GCACTTTGAAAAAATTCTAC+AGG + chr1.4:74347536-74347555 None:intergenic 30.0%
! GCTTTTTGTCCACAAATTTT+AGG - chr1.4:74348993-74349012 MS.gene34009:intron 30.0%
! GTAACACTTGGATCAATTTT+TGG + chr1.4:74348046-74348065 None:intergenic 30.0%
!! AGGAAACATCAAAGTTTTGA+TGG - chr1.4:74348679-74348698 MS.gene34009:intron 30.0%
!! GATGATTTCAGTTTGTTGTT+GGG - chr1.4:74347824-74347843 MS.gene34009:intron 30.0%
!! TGATGATTTCAGTTTGTTGT+TGG - chr1.4:74347823-74347842 MS.gene34009:intron 30.0%
!! TTTATTTTCTCTCGGTATTG+TGG - chr1.4:74347162-74347181 MS.gene34009:intron 30.0%
!! TTTCTTGTTTGCTATGTAGA+TGG - chr1.4:74347107-74347126 MS.gene34009:intron 30.0%
!!! CTCCACTTTTTTAATACTTG+TGG + chr1.4:74347014-74347033 None:intergenic 30.0%
!!! GAACTGATGCTTGTTTTATA+AGG - chr1.4:74348351-74348370 MS.gene34009:intron 30.0%
AAAAGATTGATGTGACGCAT+AGG + chr1.4:74347686-74347705 None:intergenic 35.0%
AAATTTCTCTGGATGAAGCA+TGG + chr1.4:74348240-74348259 None:intergenic 35.0%
AACAGAAATTGGGAAACGTA+GGG + chr1.4:74345692-74345711 None:intergenic 35.0%
AAGAGTTAAAGTTGTTGGGT+TGG - chr1.4:74345840-74345859 MS.gene34009:intron 35.0%
AATTTCTCTGGATGAAGCAT+GGG + chr1.4:74348239-74348258 None:intergenic 35.0%
ACAAAAAGCCATGAGCTATA+TGG + chr1.4:74348982-74349001 None:intergenic 35.0%
ACACTGCGATGATGAAATAA+AGG + chr1.4:74347986-74348005 None:intergenic 35.0%
ACTAAGTGTACCCAATGAAT+AGG - chr1.4:74346697-74346716 MS.gene34009:CDS 35.0%
ACTCAAATGATACCAGATGA+TGG + chr1.4:74348490-74348509 None:intergenic 35.0%
ACTGGTAAGAACATAACAAC+TGG - chr1.4:74349187-74349206 MS.gene34009:intron 35.0%
AGAGAGAAAGAGACATACAT+AGG + chr1.4:74345663-74345682 None:intergenic 35.0%
AGAGTTAAAGTTGTTGGGTT+GGG - chr1.4:74345841-74345860 MS.gene34009:intron 35.0%
AGGAATCTGGATCTGATATT+TGG + chr1.4:74348017-74348036 None:intergenic 35.0%
AGGTCTAGAAGGACTATAAA+AGG + chr1.4:74346086-74346105 None:intergenic 35.0%
AGTTGTTATGTTCTTACCAG+TGG + chr1.4:74349188-74349207 None:intergenic 35.0%
ATAGTCCTTCTAGACCTAAT+GGG - chr1.4:74346089-74346108 MS.gene34009:intron 35.0%
CAGAAAGCAAGTGATGTTTA+TGG - chr1.4:74346811-74346830 MS.gene34009:CDS 35.0%
CTAAGACAAACCACTATGAA+TGG + chr1.4:74347332-74347351 None:intergenic 35.0%
CTGGTAAGAACATAACAACT+GGG - chr1.4:74349188-74349207 MS.gene34009:intron 35.0%
GAAATTGTGAATCAGCTTGA+TGG - chr1.4:74348644-74348663 MS.gene34009:intron 35.0%
GATGAAATTGATGCAATTGG+AGG - chr1.4:74348566-74348585 MS.gene34009:intron 35.0%
GCAGTGAATAAAGTCATCAA+AGG - chr1.4:74349472-74349491 MS.gene34009:CDS 35.0%
GGTTTCATTAAGAGTTAACG+AGG - chr1.4:74346718-74346737 MS.gene34009:CDS 35.0%
GTGACATATAATGATGTTGG+TGG - chr1.4:74348094-74348113 MS.gene34009:CDS 35.0%
GTTGTAAGTGATCCCTTAAT+TGG - chr1.4:74347225-74347244 MS.gene34009:CDS 35.0%
TATAGTCCTTCTAGACCTAA+TGG - chr1.4:74346088-74346107 MS.gene34009:intron 35.0%
TATTTGGCATCTTCAGAGTT+TGG + chr1.4:74347632-74347651 None:intergenic 35.0%
TCTAGAAGGACTATAAAAGG+AGG + chr1.4:74346083-74346102 None:intergenic 35.0%
TGACTTTATTCACTGCATCA+AGG + chr1.4:74349468-74349487 None:intergenic 35.0%
TGTTCAGAAATATGTTGGTG+AGG - chr1.4:74348391-74348410 MS.gene34009:intron 35.0%
TTATTTCGTCCCATTCATAG+TGG - chr1.4:74347319-74347338 MS.gene34009:intron 35.0%
TTCTGATAAGCAAATGATGC+AGG - chr1.4:74347472-74347491 MS.gene34009:CDS 35.0%
TTTCTCTTCAACTGTCATCA+TGG + chr1.4:74348068-74348087 None:intergenic 35.0%
TTTGTCTTAGTTGCTTGAGT+TGG - chr1.4:74347342-74347361 MS.gene34009:intron 35.0%
! AAACGCGGATTATAGCTTAA+TGG + chr1.4:74346136-74346155 None:intergenic 35.0%
! AAATTTTAGGCCTGACACTT+TGG - chr1.4:74349006-74349025 MS.gene34009:intron 35.0%
! AACGCGGATTATAGCTTAAT+GGG + chr1.4:74346135-74346154 None:intergenic 35.0%
! AAGAAAGTGAATGACTTGTG+TGG - chr1.4:74347055-74347074 MS.gene34009:CDS 35.0%
! AAGATGTTGGTTGTTTGTAC+AGG - chr1.4:74346158-74346177 MS.gene34009:intron 35.0%
! AGAGACATACATAGGTTTTG+AGG + chr1.4:74345655-74345674 None:intergenic 35.0%
! GAAGTACTTAAAAGATGGTC+AGG + chr1.4:74349238-74349257 None:intergenic 35.0%
! GCAGAATGTTGTAAAGCATT+TGG - chr1.4:74346222-74346241 MS.gene34009:intron 35.0%
! GTTCAGAAATATGTTGGTGA+GGG - chr1.4:74348392-74348411 MS.gene34009:intron 35.0%
! TGTTGTAAAGCATTTGGAAG+GGG - chr1.4:74346228-74346247 MS.gene34009:intron 35.0%
! TTCAGAAATATGTTGGTGAG+GGG - chr1.4:74348393-74348412 MS.gene34009:intron 35.0%
!! ACACTTGGATCAATTTTTGG+AGG + chr1.4:74348043-74348062 None:intergenic 35.0%
!! TAATGATGTTGGTGGTTGTA+AGG - chr1.4:74348102-74348121 MS.gene34009:CDS 35.0%
!!! GCTTGTTTTATAAGGGTCAT+TGG - chr1.4:74348359-74348378 MS.gene34009:intron 35.0%
AAAGGTCAAACACGAAGACA+AGG + chr1.4:74347968-74347987 None:intergenic 40.0%
AATCAAGCTAGCAATGAGGT+AGG - chr1.4:74346507-74346526 MS.gene34009:CDS 40.0%
ACTGAAATCATCAAAGCAGC+AGG + chr1.4:74347816-74347835 None:intergenic 40.0%
ACTGTCATCATGGTAACACT+TGG + chr1.4:74348058-74348077 None:intergenic 40.0%
AGTGTCAGGCCTAAAATTTG+TGG + chr1.4:74349005-74349024 None:intergenic 40.0%
ATCTAGCTAATACCGAGGTA+AGG - chr1.4:74346389-74346408 MS.gene34009:intron 40.0%
ATGTTCTTACCAGTGGAGTT+TGG + chr1.4:74349181-74349200 None:intergenic 40.0%
CAATGTGAAGCAGATTGCAA+AGG - chr1.4:74347658-74347677 MS.gene34009:CDS 40.0%
CAGTGCAACTCCCAAATATA+TGG - chr1.4:74349507-74349526 MS.gene34009:CDS 40.0%
CATCCTCTTGCGATAATGAA+AGG - chr1.4:74348854-74348873 MS.gene34009:intron 40.0%
CCAAGCTTGACAAATTTCTC+TGG + chr1.4:74348251-74348270 None:intergenic 40.0%
CCAGAGAAATTTGTCAAGCT+TGG - chr1.4:74348248-74348267 MS.gene34009:intron 40.0%
CTCAACTAAGTTGTGCAAGT+CGG + chr1.4:74346266-74346285 None:intergenic 40.0%
CTTGGAATTGATCCTCCAAA+GGG - chr1.4:74348266-74348285 MS.gene34009:intron 40.0%
CTTTCATTATCGCAAGAGGA+TGG + chr1.4:74348856-74348875 None:intergenic 40.0%
GAACAATCAAGCTAGCAATG+AGG - chr1.4:74346503-74346522 MS.gene34009:CDS 40.0%
GAACAATCTAGCTAATACCG+AGG - chr1.4:74346384-74346403 MS.gene34009:intron 40.0%
GAACAGAAATTGGGAAACGT+AGG + chr1.4:74345693-74345712 None:intergenic 40.0%
GACTTGCACAACTTAGTTGA+GGG - chr1.4:74346265-74346284 MS.gene34009:intron 40.0%
GAGAACCATGAACTGTGAAA+GGG - chr1.4:74349123-74349142 MS.gene34009:intron 40.0%
GATATCCCTTTCACAGTTCA+TGG + chr1.4:74349131-74349150 None:intergenic 40.0%
TATCAGAAACAAGATCCCAC+TGG + chr1.4:74347460-74347479 None:intergenic 40.0%
TCTCTGTTACAGTCTTCCTT+CGG + chr1.4:74349438-74349457 None:intergenic 40.0%
TGATAAGCAAATGATGCAGG+AGG - chr1.4:74347475-74347494 MS.gene34009:CDS 40.0%
TGTTCTTACCAGTGGAGTTT+GGG + chr1.4:74349180-74349199 None:intergenic 40.0%
TTGCCTTTCATTATCGCAAG+AGG + chr1.4:74348860-74348879 None:intergenic 40.0%
TTGGCGTGCTACATTAATGA+TGG + chr1.4:74348806-74348825 None:intergenic 40.0%
! AGGAACTGGCAAAACACTTT+TGG - chr1.4:74348310-74348329 MS.gene34009:intron 40.0%
! GATTATAGCTTAATGGGCCT+AGG + chr1.4:74346129-74346148 None:intergenic 40.0%
! GATTTGTTCCACTTTACGCA+GGG - chr1.4:74346974-74346993 MS.gene34009:CDS 40.0%
! GTTGTAAAGCATTTGGAAGG+GGG - chr1.4:74346229-74346248 MS.gene34009:intron 40.0%
! TCAGAAATATGTTGGTGAGG+GGG - chr1.4:74348394-74348413 MS.gene34009:intron 40.0%
! TCTCTCTAGGAGCTGATATA+AGG - chr1.4:74349374-74349393 MS.gene34009:intron 40.0%
! TTCGTTTAAGGTAGGGTTTC+TGG - chr1.4:74345812-74345831 MS.gene34009:intron 40.0%
! TTTCTAGTCAAAACTTGCCC+TGG - chr1.4:74349277-74349296 MS.gene34009:intron 40.0%
!! AACTTGTTACCTCGTGTAGA+TGG - chr1.4:74348511-74348530 MS.gene34009:intron 40.0%
!! AAGTTTTGATGGCAACGAAC+AGG - chr1.4:74348690-74348709 MS.gene34009:intron 40.0%
!! TGATTTGTTCCACTTTACGC+AGG - chr1.4:74346973-74346992 MS.gene34009:CDS 40.0%
!! TTTCAGTTTGTTGTTGGGCT+AGG - chr1.4:74347829-74347848 MS.gene34009:intron 40.0%
!!! AAAAGTGTTTTGCCAGTTCC+TGG + chr1.4:74348311-74348330 None:intergenic 40.0%
!!! AATGCACGCCTTTTTTGAAC+GGG + chr1.4:74348537-74348556 None:intergenic 40.0%
!!! AGGGCAAGTTTTGACTAGAA+AGG + chr1.4:74349278-74349297 None:intergenic 40.0%
!!! CAATGCACGCCTTTTTTGAA+CGG + chr1.4:74348538-74348557 None:intergenic 40.0%
AACTTTGTGCATCCGCATCA+CGG + chr1.4:74345932-74345951 None:intergenic 45.0%
AATCCGCGTTTCGAAGATGT+TGG - chr1.4:74346145-74346164 MS.gene34009:intron 45.0%
ACAGTCGTGTATATCAGTCC+AGG - chr1.4:74346632-74346651 MS.gene34009:intron 45.0%
ACCTATTCAGTGCTCCTACA+AGG - chr1.4:74346005-74346024 MS.gene34009:CDS 45.0%
ACGCATTCCTTCCTCTATGT+CGG + chr1.4:74347872-74347891 None:intergenic 45.0%
AGATAGGATCTACCTGTGCA+AGG - chr1.4:74346345-74346364 MS.gene34009:intron 45.0%
AGCAACTAAGAAGCCTAGCA+AGG + chr1.4:74346870-74346889 None:intergenic 45.0%
AGCGATATCATCCTCATCGA+GGG + chr1.4:74345630-74345649 None:intergenic 45.0%
AGCTATATGGTCAGCAACAC+AGG + chr1.4:74348969-74348988 None:intergenic 45.0%
AGTTCTATTAGCAACAGCCC+TGG + chr1.4:74348336-74348355 None:intergenic 45.0%
ATAGAGGAAGGAATGCGTGT+TGG - chr1.4:74347874-74347893 MS.gene34009:intron 45.0%
ATAGCCTCGCAATCTATACC+TGG + chr1.4:74346653-74346672 None:intergenic 45.0%
ATTCCTTCCTCTATGTCGGT+GGG + chr1.4:74347868-74347887 None:intergenic 45.0%
CAACCAACATCTTCGAAACG+CGG + chr1.4:74346151-74346170 None:intergenic 45.0%
CCATAACAAAGCACACCCTT+TGG + chr1.4:74348284-74348303 None:intergenic 45.0%
CGACTTGCACAACTTAGTTG+AGG - chr1.4:74346264-74346283 MS.gene34009:intron 45.0%
CGAGAACCATGAACTGTGAA+AGG - chr1.4:74349122-74349141 MS.gene34009:intron 45.0%
CTCTGTTACAGTCTTCCTTC+GGG + chr1.4:74349437-74349456 None:intergenic 45.0%
CTTTGGATCCAGCACTATTG+CGG - chr1.4:74349023-74349042 MS.gene34009:intron 45.0%
GATGGTTCGTGAACTGTTTC+AGG - chr1.4:74348421-74348440 MS.gene34009:intron 45.0%
GATTCCTGACTTTCCTTGCT+AGG - chr1.4:74346854-74346873 MS.gene34009:CDS 45.0%
GCAAAGATTCCTCAAAGCCA+GGG + chr1.4:74349297-74349316 None:intergenic 45.0%
GCTATATGGTCAGCAACACA+GGG + chr1.4:74348968-74348987 None:intergenic 45.0%
GCTTGGAATTGATCCTCCAA+AGG - chr1.4:74348265-74348284 MS.gene34009:intron 45.0%
GGTATCAAGGAGTCTGATAC+TGG - chr1.4:74347419-74347438 MS.gene34009:intron 45.0%
GTACAATCAAGCTAGTGCTG+AGG - chr1.4:74346444-74346463 MS.gene34009:CDS 45.0%
GTAGATGGCCCGTTCAAAAA+AGG - chr1.4:74348526-74348545 MS.gene34009:intron 45.0%
GTATAGATTGCGAGGCTATG+TGG - chr1.4:74346654-74346673 MS.gene34009:intron 45.0%
GTTGCTGACCATATAGCTCA+TGG - chr1.4:74348971-74348990 MS.gene34009:intron 45.0%
TAACAAAGCACACCCTTTGG+AGG + chr1.4:74348281-74348300 None:intergenic 45.0%
TAACCAAAGAGAGGCCCATT+AGG + chr1.4:74346106-74346125 None:intergenic 45.0%
TAGAGGAAGGAATGCGTGTT+GGG - chr1.4:74347875-74347894 MS.gene34009:intron 45.0%
TATTCAGTGCTCCTACAAGG+AGG - chr1.4:74346008-74346027 MS.gene34009:CDS 45.0%
TGATGTGGTTGAGTCGTTCT+AGG - chr1.4:74346294-74346313 MS.gene34009:intron 45.0%
TGCAAAGATTCCTCAAAGCC+AGG + chr1.4:74349298-74349317 None:intergenic 45.0%
TGTGTCCTACTCTCTAGATC+AGG + chr1.4:74349085-74349104 None:intergenic 45.0%
TTCCACTTTACGCAGGGTTT+GGG - chr1.4:74346980-74346999 MS.gene34009:CDS 45.0%
TTGCTAGGCTTCTTAGTTGC+TGG - chr1.4:74346869-74346888 MS.gene34009:CDS 45.0%
! AATCAAGCTAGTGCTGAGGT+AGG - chr1.4:74346448-74346467 MS.gene34009:CDS 45.0%
! AGTCAAGCTAGTGCTGAGAT+AGG - chr1.4:74346329-74346348 MS.gene34009:intron 45.0%
! CCAAAGGGTGTGCTTTGTTA+TGG - chr1.4:74348281-74348300 MS.gene34009:intron 45.0%
! TGGCAAAACACTTTTGGCCA+GGG - chr1.4:74348316-74348335 MS.gene34009:intron 45.0%
! TTTGATGGCAACGAACAGGT+TGG - chr1.4:74348694-74348713 MS.gene34009:intron 45.0%
!! GGATCAATTTTTGGAGGCAG+AGG + chr1.4:74348037-74348056 None:intergenic 45.0%
!! TCCGTTTTGAGCTTCTTGCT+CGG - chr1.4:74349149-74349168 MS.gene34009:intron 45.0%
!! TCCTTGTAGGAGCACTGAAT+AGG + chr1.4:74346009-74346028 None:intergenic 45.0%
!! TGGTGTTGGTGGTGATAATG+AGG - chr1.4:74348604-74348623 MS.gene34009:intron 45.0%
!! TTTTTGGAGGCAGAGGAATC+TGG + chr1.4:74348030-74348049 None:intergenic 45.0%
ACTTTACGATCCAATCGCCC+AGG + chr1.4:74349049-74349068 None:intergenic 50.0%
AGAGGCCCATTAGGTCTAGA+AGG + chr1.4:74346097-74346116 None:intergenic 50.0%
CAGTCCAGGTATAGATTGCG+AGG - chr1.4:74346646-74346665 MS.gene34009:intron 50.0%
CATTCCTTCCTCTATGTCGG+TGG + chr1.4:74347869-74347888 None:intergenic 50.0%
CGATATCATCCTCATCGAGG+GGG + chr1.4:74345628-74345647 None:intergenic 50.0%
CTAATACCGAGGTAAGGACC+TGG - chr1.4:74346395-74346414 MS.gene34009:intron 50.0%
GAAGCCTAGCAAGGAAAGTC+AGG + chr1.4:74346861-74346880 None:intergenic 50.0%
GAGCGATATCATCCTCATCG+AGG + chr1.4:74345631-74345650 None:intergenic 50.0%
GCACGATTTGACGATGGTGT+TGG - chr1.4:74348590-74348609 MS.gene34009:intron 50.0%
GCCGAGCAAGAAGCTCAAAA+CGG + chr1.4:74349153-74349172 None:intergenic 50.0%
GCGATATCATCCTCATCGAG+GGG + chr1.4:74345629-74345648 None:intergenic 50.0%
GGTTGTTTGTACAGGACACG+TGG - chr1.4:74346166-74346185 MS.gene34009:intron 50.0%
GTTCCACTTTACGCAGGGTT+TGG - chr1.4:74346979-74346998 MS.gene34009:CDS 50.0%
TCCTACTCTCTAGATCAGGC+AGG + chr1.4:74349081-74349100 None:intergenic 50.0%
TCTACCTGTGCAAGGTGAGT+TGG - chr1.4:74346353-74346372 MS.gene34009:intron 50.0%
TCTAGCTACACCAAGCCAGT+GGG - chr1.4:74347442-74347461 MS.gene34009:CDS 50.0%
TGGGAGTTGCACTGAACTTC+TGG + chr1.4:74349501-74349520 None:intergenic 50.0%
TGTTATGGTCCACCAGGAAC+TGG - chr1.4:74348296-74348315 MS.gene34009:intron 50.0%
TTACAGTCTTCCTTCGGGCA+CGG + chr1.4:74349432-74349451 None:intergenic 50.0%
TTCCTTCCTCTATGTCGGTG+GGG + chr1.4:74347867-74347886 None:intergenic 50.0%
TTCTTGGAGCTCCTCCTTGT+AGG + chr1.4:74346022-74346041 None:intergenic 50.0%
! AAGTTAGTGCAGTGCTGAGC+GGG - chr1.4:74346570-74346589 MS.gene34009:intron 50.0%
! AATATGTTGGTGAGGGGGCT+CGG - chr1.4:74348399-74348418 MS.gene34009:intron 50.0%
! AGACCTAATGGGCCTCTCTT+TGG - chr1.4:74346100-74346119 MS.gene34009:intron 50.0%
! AGTGCTGGATCCAAAGTGTC+AGG + chr1.4:74349019-74349038 None:intergenic 50.0%
! AGTGTTTTGCCAGTTCCTGG+TGG + chr1.4:74348308-74348327 None:intergenic 50.0%
! CAAGTTAGTGCAGTGCTGAG+CGG - chr1.4:74346569-74346588 MS.gene34009:CDS 50.0%
! CGATTTGACGATGGTGTTGG+TGG - chr1.4:74348593-74348612 MS.gene34009:intron 50.0%
! CTGGCAAAACACTTTTGGCC+AGG - chr1.4:74348315-74348334 MS.gene34009:intron 50.0%
! GAAACAAGATCCCACTGGCT+TGG + chr1.4:74347455-74347474 None:intergenic 50.0%
! GTGCTTTGTTATGGTCCACC+AGG - chr1.4:74348290-74348309 MS.gene34009:intron 50.0%
! TGTTGTTGGGCTAGGAGACA+AGG - chr1.4:74347837-74347856 MS.gene34009:intron 50.0%
!! CAAAACTTGCCCTGGCTTTG+AGG - chr1.4:74349285-74349304 MS.gene34009:intron 50.0%
!! CTTGATGGGTTTGATGCTCG+AGG - chr1.4:74348659-74348678 MS.gene34009:intron 50.0%
!! TTGTGCAAGTCGGCTTGTTG+TGG + chr1.4:74346256-74346275 None:intergenic 50.0%
AGTTGAGGGCGAGCTTGATG+TGG - chr1.4:74346279-74346298 MS.gene34009:intron 55.0%
ATCCAGCACTATTGCGGCCT+GGG - chr1.4:74349029-74349048 MS.gene34009:intron 55.0%
CAATGAGGTAGGACCTGACC+GGG - chr1.4:74346518-74346537 MS.gene34009:CDS 55.0%
GCAATGAGGTAGGACCTGAC+CGG - chr1.4:74346517-74346536 MS.gene34009:CDS 55.0%
GCCTGCCTGATCTAGAGAGT+AGG - chr1.4:74349077-74349096 MS.gene34009:intron 55.0%
GGGCCTAGGTAACCAAAGAG+AGG + chr1.4:74346115-74346134 None:intergenic 55.0%
GGGCCTCTCTTTGGTTACCT+AGG - chr1.4:74346109-74346128 MS.gene34009:intron 55.0%
GTCCCAAACCCTGCGTAAAG+TGG + chr1.4:74346985-74347004 None:intergenic 55.0%
GTCTAGCTACACCAAGCCAG+TGG - chr1.4:74347441-74347460 MS.gene34009:CDS 55.0%
TCCTTCCTCTATGTCGGTGG+GGG + chr1.4:74347866-74347885 None:intergenic 55.0%
TGCTGAGGTAGGATGTGGCT+GGG - chr1.4:74346459-74346478 MS.gene34009:CDS 55.0%
TGTATGCTATCCGTGCCCGA+AGG - chr1.4:74349419-74349438 MS.gene34009:intron 55.0%
TTGAACGGGCCATCTACACG+AGG + chr1.4:74348523-74348542 None:intergenic 55.0%
! AGGAGTGTGTGCACTGAAGC+TGG - chr1.4:74349394-74349413 MS.gene34009:intron 55.0%
! AGTTAGTGCAGTGCTGAGCG+GGG - chr1.4:74346571-74346590 MS.gene34009:intron 55.0%
! GCTAGTGCTGAGGTAGGATG+TGG - chr1.4:74346454-74346473 MS.gene34009:CDS 55.0%
! GGAGGTGCACGATTTGACGA+TGG - chr1.4:74348584-74348603 MS.gene34009:intron 55.0%
ACCCAGCCAGGTCCTTACCT+CGG + chr1.4:74346404-74346423 None:intergenic 60.0%
ACCGAGGTAAGGACCTGGCT+GGG - chr1.4:74346400-74346419 MS.gene34009:intron 60.0%
ACTATTGCGGCCTGGGCGAT+TGG - chr1.4:74349036-74349055 MS.gene34009:intron 60.0%
CGGCTTTGCCCAAACTCCAC+TGG - chr1.4:74349169-74349188 MS.gene34009:intron 60.0%
CGTGCCAACTCACCTTGCAC+AGG + chr1.4:74346360-74346379 None:intergenic 60.0%
CTAACTCACCTCACCCAGCC+AGG + chr1.4:74346416-74346435 None:intergenic 60.0%
GATCCAGCACTATTGCGGCC+TGG - chr1.4:74349028-74349047 MS.gene34009:intron 60.0%
GGTTTCCCCCACCGACATAG+AGG - chr1.4:74347858-74347877 MS.gene34009:intron 60.0%
GTGCTGAGGTAGGATGTGGC+TGG - chr1.4:74346458-74346477 MS.gene34009:CDS 60.0%
TACCGAGGTAAGGACCTGGC+TGG - chr1.4:74346399-74346418 MS.gene34009:intron 60.0%
TCCCCCACCGACATAGAGGA+AGG - chr1.4:74347862-74347881 MS.gene34009:intron 60.0%
! GTTAGTGCAGTGCTGAGCGG+GGG - chr1.4:74346572-74346591 MS.gene34009:intron 60.0%
CATCCTCATCGAGGGGGCGA+GGG + chr1.4:74345622-74345641 None:intergenic 65.0%
GCAGGAGGAGCAGCCTCTTC+AGG - chr1.4:74347490-74347509 MS.gene34009:CDS 65.0%
GGTAAGGACCTGGCTGGGTG+AGG - chr1.4:74346405-74346424 MS.gene34009:intron 65.0%
TCATCCTCATCGAGGGGGCG+AGG + chr1.4:74345623-74345642 None:intergenic 65.0%
TCATGCCAGCTCTCCTCGCC+CGG + chr1.4:74346539-74346558 None:intergenic 65.0%
! TGTTGGTGAGGGGGCTCGGA+TGG - chr1.4:74348403-74348422 MS.gene34009:intron 65.0%
AGGTAGGACCTGACCGGGCG+AGG - chr1.4:74346523-74346542 MS.gene34009:CDS 70.0%
CGCCCAGGCCGCAATAGTGC+TGG + chr1.4:74349034-74349053 None:intergenic 70.0%
GAACCCTCGCCCCCTCGATG+AGG - chr1.4:74345616-74345635 MS.gene34009:CDS 70.0%
CCAGCTCTCCTCGCCCGGTC+AGG + chr1.4:74346534-74346553 None:intergenic 75.0%
CCTGACCGGGCGAGGAGAGC+TGG - chr1.4:74346531-74346550 MS.gene34009:CDS 75.0%
! GTGCAGTGCTGAGCGGGGGC+TGG - chr1.4:74346576-74346595 MS.gene34009:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 74345578 74349540 74345578 ID=MS.gene34009
chr1.4 mRNA 74345578 74349540 74345578 ID=MS.gene34009.t1;Parent=MS.gene34009
chr1.4 exon 74349454 74349540 74349454 ID=MS.gene34009.t1.exon1;Parent=MS.gene34009.t1
chr1.4 CDS 74349454 74349540 74349454 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74348042 74348123 74348042 ID=MS.gene34009.t1.exon2;Parent=MS.gene34009.t1
chr1.4 CDS 74348042 74348123 74348042 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74347607 74347698 74347607 ID=MS.gene34009.t1.exon3;Parent=MS.gene34009.t1
chr1.4 CDS 74347607 74347698 74347607 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74347439 74347516 74347439 ID=MS.gene34009.t1.exon4;Parent=MS.gene34009.t1
chr1.4 CDS 74347439 74347516 74347439 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74347222 74347283 74347222 ID=MS.gene34009.t1.exon5;Parent=MS.gene34009.t1
chr1.4 CDS 74347222 74347283 74347222 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74346971 74347115 74346971 ID=MS.gene34009.t1.exon6;Parent=MS.gene34009.t1
chr1.4 CDS 74346971 74347115 74346971 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74346676 74346894 74346676 ID=MS.gene34009.t1.exon7;Parent=MS.gene34009.t1
chr1.4 CDS 74346676 74346894 74346676 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74346407 74346588 74346407 ID=MS.gene34009.t1.exon8;Parent=MS.gene34009.t1
chr1.4 CDS 74346407 74346588 74346407 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74345928 74346103 74345928 ID=MS.gene34009.t1.exon9;Parent=MS.gene34009.t1
chr1.4 CDS 74345928 74346103 74345928 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
chr1.4 exon 74345578 74345735 74345578 ID=MS.gene34009.t1.exon10;Parent=MS.gene34009.t1
chr1.4 CDS 74345578 74345735 74345578 ID=cds.MS.gene34009.t1;Parent=MS.gene34009.t1
Gene Sequence

>MS.gene34009

ATGTCTAATGAACACGAAGACGATCTCAAAGACGAGAAGAACCCTCGCCCCCTCGATGAGGATGATATCGCTCTCCTCAAAACCTATGTATGTCTCTTTCTCTCTCTAAAACCCTACGTTTCCCAATTTCTGTTCTATTTCAATTCAATTGTGGATTTTTTTTTTGGGAATTTTCCTGATTCTGTTAATTAAAGTTGTTACTTTTTGTAAATTTTGCAACTCGAATTAATGAAATTCGTTTAAGGTAGGGTTTCTGGATGTTAAGAGTTAAAGTTGTTGGGTTGGGTTTGTGTAAATTGATGCTTGTGGTAGCTGTGTGAGTGTGAAATATACATGTTAATTGTTAATATACCGTGATGCGGATGCACAAAGTTTGTAATTTCATATAGGAATTGTTCACTTATGTAAAAACAAGTTACAACATGTGACCTATTCAGTGCTCCTACAAGGAGGAGCTCCAAGAATACTCTAAGATAAATATACACTATTTTAGCTAGAAGTGCCTCCTTTTATAGTCCTTCTAGACCTAATGGGCCTCTCTTTGGTTACCTAGGCCCATTAAGCTATAATCCGCGTTTCGAAGATGTTGGTTGTTTGTACAGGACACGTGGAGTCAGTGAACACGTAACTTACATAACTACGCCGCAGAATGTTGTAAAGCATTTGGAAGGGGGACCACAACAAGCCGACTTGCACAACTTAGTTGAGGGCGAGCTTGATGTGGTTGAGTCGTTCTAGGCATGACTTGAACAGTCAAGCTAGTGCTGAGATAGGATCTACCTGTGCAAGGTGAGTTGGCACGACTTGAACAATCTAGCTAATACCGAGGTAAGGACCTGGCTGGGTGAGGTGAGTTAGTATGACTTGTACAATCAAGCTAGTGCTGAGGTAGGATGTGGCTGGGAGAGCTGAGCTAGTATGACTTGAACAATCAAGCTAGCAATGAGGTAGGACCTGACCGGGCGAGGAGAGCTGGCATGACTTGAACAATCAAGTTAGTGCAGTGCTGAGCGGGGGCTGGATAGTCAACATGAAATATTAAGAGACATGTGGTACAGTCGTGTATATCAGTCCAGGTATAGATTGCGAGGCTATGTGGTAAAGCTGTAACCTTTAATTACTAAGTGTACCCAATGAATAGGTTTCATTAAGAGTTAACGAGGTGCTACTAATGTGTGTAACTATGTATTTAGTGGTGACGATGTGATTGCAAAGTCTATTTAATCTGTTCTACAGAAAGCAAGTGATGTTTATGGAGATGTTTTGCTCATTTGTTGATTCCTGACTTTCCTTGCTAGGCTTCTTAGTTGCTGGACTGAATGCTTTTTCTATGATCAATGGTTTTCTGATTATTAGCGCATTTAAATTTGAATAGTCTTTTATGAAATGTTTTGTTGATTTGTTCCACTTTACGCAGGGTTTGGGACCTTATTCCACAAGTATTAAAAAAGTGGAGAAGGAAATTAAAGATATGGCAAAGAAAGTGAATGACTTGTGTGGTATGTGATTAATATTTAGTTTTTTTTTATTTTCTTGTTTGCTATGTAGATGGTTGAAACTGTTTAACTAAAGAAAATTACATCTTTTATTTTCTCTCGGTATTGTGGTTTATTCTATGCCCCTTTGCTGTCTATTTTCATTTTTATGGTTGTAAGTGATCCCTTAATTGGGTATATTTCTCTCTCCAAATTTATTCTTAAACTGAAGGAACAACTAGATAATTGGATATTATGTAGGTGTTTTATTTCGTCCCATTCATAGTGGTTTGTCTTAGTTGCTTGAGTTGGATGCTGTTATCACTTGCACGCTTCGTTAGATGTTAACTTCCTGTTGTAATAATAGGTATCAAGGAGTCTGATACTGGTCTAGCTACACCAAGCCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAGCCTCTTCAGGTGATTTTTTTTCTTTCTCATCCTGTAGAATTTTTTCAAAGTGCTTTTATTATTTATAGGAATGCCTAAATATGGTCATTTATTGAACAGGTTGCAAGATGCACGAAAATTATAAATCCAAACTCTGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCAAAGGTGCCTATGCGTCACATCAATCTTTTCATTTATACTTAATTAATCTATTATATAGATATTTGTTTATCACTCGTTTATATGCTGTTTAATATGACAAGGATTTACAAAAAAAAATTACGCTCGGTCTAATATTCCTGCTGCTTTGATGATTTCAGTTTGTTGTTGGGCTAGGAGACAAGGTTTCCCCCACCGACATAGAGGAAGGAATGCGTGTTGGGTATGTGTCCAAAAAATAACTCTTATGATAATATATCACCCAAAGAAAGAAGAGTAACAACATTATTACCTTGTCTTCGTGTTTGACCTTTATTTCATCATCGCAGTGTTGATAGAACCAAATATCAGATCCAGATTCCTCTGCCTCCAAAAATTGATCCAAGTGTTACCATGATGACAGTTGAAGAGAAACCAGATGTGACATATAATGATGTTGGTGGTTGTAAGGAACAGATTGAAAAGATGCGTGAAGTAAGTTTTTGAAATTTTCCATATTTCACATAACAACGGAAATGAATTGGCACTGAATTTTTAATTTCTCTGCAAGGTTGTTGAACTTCCCATGCTTCATCCAGAGAAATTTGTCAAGCTTGGAATTGATCCTCCAAAGGGTGTGCTTTGTTATGGTCCACCAGGAACTGGCAAAACACTTTTGGCCAGGGCTGTTGCTAATAGAACTGATGCTTGTTTTATAAGGGTCATTGGAAGTGAACTTGTTCAGAAATATGTTGGTGAGGGGGCTCGGATGGTTCGTGAACTGTTTCAGGTAAATGTTTCCTGTTTTATATAGCTTTGTTTTTATCATTGTTTCCATCATCTGGTATCATTTGAGTGAACTTGTTACCTCGTGTAGATGGCCCGTTCAAAAAAGGCGTGCATTGTGTTTTTTGATGAAATTGATGCAATTGGAGGTGCACGATTTGACGATGGTGTTGGTGGTGATAATGAGGTTCAGCGAACTATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCTCGAGGAAACATCAAAGTTTTGATGGCAACGAACAGGTTGGTTATTACTATTATTTGGTTTTCCCTTTGTTCTCTATTTTACTGTAGATGTTATGAAAGCATCTCTCTTTGTATTCATTCATATTTTCCATCATTAATGTAGCACGCCAAATGCTCTTTTTTTCTCATAATGTCTGTCCATCCTCTTGCGATAATGAAAGGCAAAATCAAGGTTGCATTGCTAGTTTGCAACTTCATTTTTAGATGTTTCGTTGCTTCATGAGTCATTTTCTTCAATTTGAAAGTTTTACCCTGTGTTGCTGACCATATAGCTCATGGCTTTTTGTCCACAAATTTTAGGCCTGACACTTTGGATCCAGCACTATTGCGGCCTGGGCGATTGGATCGTAAAGTTGAATTTGGCCTGCCTGATCTAGAGAGTAGGACACAAATATTCAAGATACACACGAGAACCATGAACTGTGAAAGGGATATCCGTTTTGAGCTTCTTGCTCGGCTTTGCCCAAACTCCACTGGTAAGAACATAACAACTGGGCAATTTTTAATTTAGCTTATACTTCCTGACCATCTTTTAAGTACTTCAGTATTCTGGCTTATGTCCTTTCTAGTCAAAACTTGCCCTGGCTTTGAGGAATCTTTGCAACTTGCTTTCGTTGTCATGAAAAATTAGTGTCCTTTCTGACCAATATACTTTTTGTTCTCTCTAGGAGCTGATATAAGGAGTGTGTGCACTGAAGCTGGTATGTATGCTATCCGTGCCCGAAGGAAGACTGTAACAGAGAAAGACTTCCTTGATGCAGTGAATAAAGTCATCAAAGGGTACCAGAAGTTCAGTGCAACTCCCAAATATATGGTCTACAATTGA
Protein sequence

>MS.gene34009.t1

MSNEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKDMAKKVNDLCGIKESDTGLATPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEIDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN