AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041770.t1 MTR_8g023550 94.836 426 7 1 1 426 1 411 0.0 820
MS.gene041770.t1 MTR_1g095660 96.104 385 9 1 48 426 1 385 0.0 751
MS.gene041770.t1 MTR_4g094270 53.890 347 149 4 72 411 61 403 6.36e-120 355
MS.gene041770.t1 MTR_3g117230 49.375 320 161 1 103 422 77 395 2.86e-112 335
MS.gene041770.t1 MTR_3g112260 48.607 323 165 1 100 422 71 392 5.09e-112 335
MS.gene041770.t1 MTR_1g083330 52.881 295 136 1 115 409 120 411 2.39e-105 318
MS.gene041770.t1 MTR_4g033235 52.881 295 136 1 115 409 121 412 3.73e-105 318
MS.gene041770.t1 MTR_1g069105 46.628 341 174 3 85 423 112 446 7.09e-105 318
MS.gene041770.t1 MTR_7g099640 46.628 341 174 3 85 423 111 445 1.13e-104 317
MS.gene041770.t1 MTR_3g062510 55.253 257 115 0 146 402 140 396 1.56e-103 313
MS.gene041770.t1 MTR_7g099640 47.742 310 158 1 85 394 111 416 1.74e-100 306
MS.gene041770.t1 MTR_3g062510 61.275 204 79 0 146 349 140 343 5.27e-92 282
MS.gene041770.t1 MTR_1g069105 48.315 267 134 1 85 351 112 374 1.87e-86 269
MS.gene041770.t1 MTR_7g010800 39.051 274 166 1 146 419 187 459 4.11e-64 218
MS.gene041770.t1 MTR_3g115110 43.307 254 143 1 165 418 249 501 2.85e-63 216
MS.gene041770.t1 MTR_1g063380 43.568 241 136 0 151 391 464 704 7.12e-62 214
MS.gene041770.t1 MTR_1g063380 39.768 259 150 4 164 419 204 459 1.87e-58 205
MS.gene041770.t1 MTR_4g094662 41.016 256 150 1 159 414 223 477 1.33e-61 211
MS.gene041770.t1 MTR_6g059690 42.642 265 148 3 154 415 186 449 2.30e-61 211
MS.gene041770.t1 MTR_2g438140 41.016 256 150 1 159 414 220 474 2.50e-61 211
MS.gene041770.t1 MTR_7g101870 42.231 251 145 0 151 401 465 715 6.76e-61 211
MS.gene041770.t1 MTR_7g101870 40.756 238 138 2 164 401 205 439 8.86e-58 203
MS.gene041770.t1 MTR_2g438140 41.016 256 150 1 159 414 280 534 8.61e-61 209
MS.gene041770.t1 MTR_2g095210 43.154 241 137 0 151 391 392 632 7.68e-60 207
MS.gene041770.t1 MTR_2g095210 52.222 90 42 1 160 248 201 290 1.21e-21 98.2
MS.gene041770.t1 MTR_7g089040 41.053 285 161 3 148 426 668 951 1.88e-59 209
MS.gene041770.t1 MTR_7g089040 30.942 223 148 3 170 391 391 608 1.07e-26 113
MS.gene041770.t1 MTR_7g088850 40.496 242 144 0 150 391 267 508 2.67e-58 200
MS.gene041770.t1 MTR_7g088850 27.426 237 160 5 172 404 24 252 1.21e-19 91.7
MS.gene041770.t1 MTR_7g096060 40.892 269 151 4 152 415 227 492 1.33e-57 201
MS.gene041770.t1 MTR_7g078570 42.264 265 149 3 154 415 181 444 1.77e-57 199
MS.gene041770.t1 MTR_4g064350 41.132 265 152 3 154 415 309 572 1.03e-56 200
MS.gene041770.t1 MTR_7g088980 41.322 242 142 0 150 391 121 362 1.40e-56 192
MS.gene041770.t1 MTR_0376s0020 41.107 253 146 2 165 415 1 252 6.03e-56 194
MS.gene041770.t1 MTR_7g088980 41.322 242 142 0 150 391 203 444 1.62e-55 191
MS.gene041770.t1 MTR_7g088980 34.211 152 92 4 244 390 28 176 2.77e-14 75.1
MS.gene041770.t1 MTR_5g069780 40.221 271 154 4 153 418 301 568 1.93e-55 196
MS.gene041770.t1 MTR_7g088980 41.322 242 142 0 150 391 271 512 5.95e-55 191
MS.gene041770.t1 MTR_7g088980 34.513 226 140 4 170 390 22 244 6.24e-30 122
MS.gene041770.t1 MTR_7g088980 41.322 242 142 0 150 391 297 538 1.06e-54 191
MS.gene041770.t1 MTR_7g088980 30.952 252 140 5 170 390 22 270 5.94e-25 107
MS.gene041770.t1 MTR_2g095320 40.741 243 136 4 160 401 147 382 2.10e-54 192
MS.gene041770.t1 MTR_2g095320 36.207 290 160 5 115 401 377 644 5.47e-49 177
MS.gene041770.t1 MTR_3g462930 40.152 264 150 4 160 418 299 559 6.69e-53 189
MS.gene041770.t1 MTR_7g088830 38.028 284 169 3 149 426 642 924 6.92e-53 190
MS.gene041770.t1 MTR_7g088830 37.374 198 110 5 204 396 432 620 8.84e-28 116
MS.gene041770.t1 MTR_6g016600 36.545 301 175 5 123 412 267 562 5.86e-50 179
MS.gene041770.t1 MTR_7g089290 40.254 236 132 6 163 393 637 868 6.97e-50 181
MS.gene041770.t1 MTR_7g089290 40.254 236 132 6 163 393 665 896 9.24e-50 181
MS.gene041770.t1 MTR_8g099605 36.029 272 165 3 159 422 157 427 3.99e-49 177
MS.gene041770.t1 MTR_4g067100 38.976 254 142 5 165 409 380 629 7.52e-49 179
MS.gene041770.t1 MTR_4g067100 38.976 254 142 5 165 409 380 629 7.59e-49 179
MS.gene041770.t1 MTR_3g104470 39.098 266 154 3 157 418 212 473 1.14e-48 176
MS.gene041770.t1 MTR_8g099605 37.500 256 151 3 165 412 404 658 1.20e-48 178
MS.gene041770.t1 MTR_1g028390 37.255 255 155 2 161 415 325 574 1.34e-47 174
MS.gene041770.t1 MTR_2g101290 37.247 247 154 1 159 405 409 654 5.09e-47 172
MS.gene041770.t1 MTR_2g101290 37.903 248 151 3 159 405 409 654 7.58e-47 172
MS.gene041770.t1 MTR_3g104480 39.841 251 147 2 168 418 225 471 1.53e-46 171
MS.gene041770.t1 MTR_2g078630 39.744 234 126 5 167 391 68 295 2.05e-45 169
MS.gene041770.t1 MTR_2g078630 39.744 234 126 5 167 391 596 823 6.22e-45 167
MS.gene041770.t1 MTR_2g007010 36.626 243 149 2 150 390 513 752 3.20e-44 165
MS.gene041770.t1 MTR_2g007010 38.723 235 124 5 167 391 240 464 3.06e-39 150
MS.gene041770.t1 MTR_2g086160 38.618 246 131 9 145 382 112 345 3.98e-43 155
MS.gene041770.t1 MTR_3g096000 37.066 259 156 4 156 408 287 544 7.92e-43 160
MS.gene041770.t1 MTR_5g075340 36.863 255 157 2 164 418 228 478 1.43e-42 160
MS.gene041770.t1 MTR_4g053350 37.860 243 141 7 149 388 111 346 2.88e-42 154
MS.gene041770.t1 MTR_3g023900 31.792 346 172 7 97 409 485 799 3.64e-42 159
MS.gene041770.t1 MTR_3g023900 32.941 255 157 5 167 409 236 488 6.61e-34 135
MS.gene041770.t1 MTR_8g099065 36.522 230 140 3 164 391 533 758 4.17e-42 159
MS.gene041770.t1 MTR_3g092070 38.627 233 131 6 164 391 80 305 4.27e-42 151
MS.gene041770.t1 MTR_4g053350 37.860 243 141 7 149 388 111 346 4.41e-42 154
MS.gene041770.t1 MTR_3g092070 38.627 233 131 6 164 391 80 305 4.97e-42 152
MS.gene041770.t1 MTR_2g086160 38.618 246 131 9 145 382 112 345 7.46e-42 153
MS.gene041770.t1 MTR_3g092080 37.768 233 133 6 164 391 83 308 3.79e-41 150
MS.gene041770.t1 MTR_3g092080 37.768 233 133 6 164 391 83 308 3.86e-41 149
MS.gene041770.t1 MTR_4g011810 37.647 255 138 7 151 391 224 471 4.28e-41 153
MS.gene041770.t1 MTR_5g009840 35.371 229 142 3 165 391 516 740 1.46e-38 148
MS.gene041770.t1 MTR_6g033740 33.101 287 176 6 115 391 443 723 8.52e-38 146
MS.gene041770.t1 MTR_1g099470 36.957 230 136 5 165 391 434 657 2.51e-37 144
MS.gene041770.t1 MTR_1g088730 35.931 231 139 5 165 391 932 1157 3.02e-37 145
MS.gene041770.t1 MTR_3g023890 35.206 267 138 7 150 390 370 627 3.20e-37 144
MS.gene041770.t1 MTR_3g023890 33.182 220 125 7 174 381 103 312 2.48e-27 115
MS.gene041770.t1 MTR_4g096870 34.025 241 152 5 153 391 107 342 3.69e-37 140
MS.gene041770.t1 MTR_1g044600 34.082 267 135 4 152 415 152 380 1.58e-36 140
MS.gene041770.t1 MTR_1g101870 36.364 231 139 5 164 391 556 781 2.27e-36 142
MS.gene041770.t1 MTR_7g075520 34.000 250 138 7 154 391 201 435 2.39e-36 139
MS.gene041770.t1 MTR_3g104490 34.767 279 141 6 144 418 193 434 2.54e-36 141
MS.gene041770.t1 MTR_1g101870 36.364 231 139 5 164 391 504 729 2.59e-36 142
MS.gene041770.t1 MTR_5g075360 33.209 268 171 3 154 417 51 314 3.10e-36 139
MS.gene041770.t1 MTR_1g088750 35.498 231 140 5 165 391 938 1163 3.12e-36 142
MS.gene041770.t1 MTR_1g088750 35.498 231 140 5 165 391 889 1114 3.22e-36 142
MS.gene041770.t1 MTR_5g075360 34.000 250 161 2 168 417 19 264 5.50e-36 138
MS.gene041770.t1 MTR_5g075360 33.209 268 171 3 154 417 227 490 1.14e-35 139
MS.gene041770.t1 MTR_5g075360 34.000 250 161 2 168 417 195 440 2.83e-35 138
MS.gene041770.t1 MTR_3g089100 34.956 226 138 5 165 386 897 1117 3.57e-35 139
MS.gene041770.t1 MTR_3g089100 34.956 226 138 5 165 386 902 1122 3.89e-35 139
MS.gene041770.t1 MTR_3g089100 34.956 226 138 5 165 386 931 1151 4.73e-35 138
MS.gene041770.t1 MTR_8g469460 33.453 278 136 5 144 417 193 425 4.87e-35 137
MS.gene041770.t1 MTR_4g088885 36.255 251 129 6 191 413 249 496 1.08e-34 137
MS.gene041770.t1 MTR_8g056860 34.348 230 137 3 188 408 492 716 1.23e-34 137
MS.gene041770.t1 MTR_6g023875 32.812 256 150 9 146 391 363 606 2.02e-34 135
MS.gene041770.t1 MTR_1g099480 35.111 225 138 5 165 386 468 687 3.46e-34 135
MS.gene041770.t1 MTR_7g088980 33.471 242 118 1 150 391 271 469 7.18e-34 133
MS.gene041770.t1 MTR_7g088980 34.513 226 140 4 170 390 22 244 2.90e-30 122
MS.gene041770.t1 MTR_7g088980 33.471 242 118 1 150 391 297 495 9.18e-34 133
MS.gene041770.t1 MTR_7g088980 30.952 252 140 5 170 390 22 270 3.57e-25 108
MS.gene041770.t1 MTR_5g074850 35.749 207 129 2 197 402 536 739 4.25e-32 129
MS.gene041770.t1 MTR_6g023855 31.557 244 140 8 161 391 242 471 3.98e-31 125
MS.gene041770.t1 MTR_8g099065 38.953 172 99 3 164 333 533 700 1.73e-30 124
MS.gene041770.t1 MTR_4g112600 64.103 78 27 1 169 245 4 81 2.89e-29 109
MS.gene041770.t1 MTR_2g024440 31.034 232 141 6 164 385 213 435 7.54e-29 118
MS.gene041770.t1 MTR_2g024440 31.034 232 141 6 164 385 296 518 1.20e-28 118
MS.gene041770.t1 MTR_2g024440 31.034 232 141 6 164 385 295 517 1.24e-28 118
MS.gene041770.t1 MTR_4g074920 32.743 226 125 7 165 386 669 871 9.17e-28 116
MS.gene041770.t1 MTR_1g099480 37.791 172 100 4 165 333 468 635 1.40e-26 112
MS.gene041770.t1 MTR_6g023865 28.028 289 158 10 159 409 152 428 3.34e-25 107
MS.gene041770.t1 MTR_1g080430 33.508 191 121 6 161 348 673 860 4.69e-21 96.3
MS.gene041770.t1 MTR_1g080430 33.508 191 121 6 161 348 673 860 5.44e-21 96.3
MS.gene041770.t1 MTR_4g083460 33.889 180 96 5 167 327 839 1014 7.08e-20 92.8
MS.gene041770.t1 MTR_8g074160 84.444 45 7 0 141 185 100 144 9.08e-19 83.2
MS.gene041770.t1 MTR_8g074130 52.174 92 17 3 311 400 25 91 1.44e-17 77.8
MS.gene041770.t1 MTR_6g023845 24.742 291 150 10 146 409 97 345 4.01e-16 79.7
MS.gene041770.t1 MTR_8g018640 52.381 84 21 2 317 400 78 142 1.92e-15 73.6
MS.gene041770.t1 MTR_6g005760 27.799 259 151 10 105 351 144 378 1.14e-14 76.3
MS.gene041770.t1 MTR_6g005760 27.799 259 151 10 105 351 272 506 1.33e-14 76.3
MS.gene041770.t1 MTR_4g077880 31.053 190 111 6 175 351 330 512 7.24e-14 73.9
MS.gene041770.t1 MTR_5g020530 34.483 145 87 5 201 344 387 524 1.23e-13 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041770.t1 AT1G53750 96.244 426 16 0 1 426 1 426 0.0 845
MS.gene041770.t1 AT1G53780 87.023 393 50 1 33 425 227 618 0.0 714
MS.gene041770.t1 AT1G53780 87.023 393 50 1 33 425 206 597 0.0 713
MS.gene041770.t1 AT1G53780 87.023 393 50 1 33 425 206 597 0.0 713
MS.gene041770.t1 AT1G53780 87.023 393 50 1 33 425 205 596 0.0 713
MS.gene041770.t1 AT5G19990 53.468 346 150 4 73 411 6 347 4.16e-120 354
MS.gene041770.t1 AT5G19990 49.612 387 181 6 26 411 32 405 7.26e-120 355
MS.gene041770.t1 AT5G19990 49.612 387 181 6 26 411 32 405 7.26e-120 355
MS.gene041770.t1 AT5G20000 53.602 347 150 4 72 411 63 405 2.88e-119 354
MS.gene041770.t1 AT1G45000 48.297 323 166 1 100 422 71 392 1.42e-112 336
MS.gene041770.t1 AT5G43010 48.297 323 166 1 100 422 71 392 1.98e-112 336
MS.gene041770.t1 AT4G29040 46.628 341 174 3 85 423 109 443 1.40e-105 320
MS.gene041770.t1 AT2G20140 46.628 341 174 3 85 423 109 443 1.95e-105 319
MS.gene041770.t1 AT3G05530 52.542 295 137 1 115 409 121 412 1.33e-104 317
MS.gene041770.t1 AT1G09100 52.542 295 137 1 115 409 120 411 1.07e-103 314
MS.gene041770.t1 AT5G58290 54.864 257 116 0 146 402 133 389 1.62e-103 313
MS.gene041770.t1 AT1G45000 47.826 207 108 0 100 306 71 277 1.35e-68 221
MS.gene041770.t1 AT5G42270 44.094 254 141 1 165 418 247 499 1.45e-64 220
MS.gene041770.t1 AT5G15250 39.777 269 161 1 146 414 202 469 2.12e-63 216
MS.gene041770.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene041770.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene041770.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene041770.t1 AT2G30950 39.925 268 160 1 147 414 210 476 7.73e-63 215
MS.gene041770.t1 AT1G50250 42.913 254 144 1 165 418 259 511 9.36e-63 215
MS.gene041770.t1 AT3G53230 42.629 251 144 0 151 401 464 714 1.53e-61 213
MS.gene041770.t1 AT3G53230 42.128 235 132 3 160 393 199 430 3.50e-57 201
MS.gene041770.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene041770.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene041770.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene041770.t1 AT5G03340 43.154 241 137 0 151 391 463 703 2.79e-60 210
MS.gene041770.t1 AT5G03340 41.532 248 140 4 160 405 198 442 1.85e-58 205
MS.gene041770.t1 AT5G15250 36.644 292 161 2 146 414 202 492 1.53e-59 202
MS.gene041770.t1 AT3G09840 41.564 243 138 3 164 405 203 442 4.31e-59 206
MS.gene041770.t1 AT3G09840 43.254 252 142 1 151 401 463 714 4.44e-59 206
MS.gene041770.t1 AT1G07510 41.509 265 151 3 154 415 313 576 1.27e-58 205
MS.gene041770.t1 AT3G56690 43.443 244 133 2 149 390 705 945 2.02e-56 201
MS.gene041770.t1 AT3G56690 37.220 223 135 3 170 391 387 605 5.80e-41 155
MS.gene041770.t1 AT2G29080 41.887 265 151 2 153 415 307 570 4.15e-56 198
MS.gene041770.t1 AT3G47060 41.985 262 144 4 165 421 322 580 5.36e-56 198
MS.gene041770.t1 AT5G58870 41.603 262 145 4 165 421 326 584 3.41e-55 196
MS.gene041770.t1 AT1G05910 40.000 245 136 4 164 401 377 617 8.32e-51 184
MS.gene041770.t1 AT3G02450 38.346 266 158 3 160 423 326 587 1.18e-50 181
MS.gene041770.t1 AT2G03670 39.506 243 146 1 150 391 268 510 3.76e-50 179
MS.gene041770.t1 AT2G03670 31.667 240 157 3 169 402 23 261 1.38e-33 133
MS.gene041770.t1 AT1G03000 34.653 303 183 8 102 395 588 884 9.67e-50 181
MS.gene041770.t1 AT5G53170 37.255 255 155 2 161 415 355 604 1.11e-48 177
MS.gene041770.t1 AT5G53540 40.343 233 127 6 164 391 83 308 4.50e-48 169
MS.gene041770.t1 AT2G26140 39.286 252 149 2 167 418 226 473 5.89e-48 174
MS.gene041770.t1 AT4G23940 36.364 264 155 3 159 412 421 681 2.30e-47 174
MS.gene041770.t1 AT3G16290 37.247 247 154 1 159 405 401 646 8.48e-46 169
MS.gene041770.t1 AT3G15120 40.260 231 127 4 167 390 718 944 3.35e-45 168
MS.gene041770.t1 AT3G15120 40.260 231 127 4 167 390 728 954 3.58e-45 168
MS.gene041770.t1 AT4G27680 39.914 233 128 6 164 391 80 305 6.75e-45 160
MS.gene041770.t1 AT5G64580 38.224 259 153 5 156 408 304 561 7.58e-44 164
MS.gene041770.t1 AT1G80350 38.843 242 133 5 159 391 230 465 2.10e-41 154
MS.gene041770.t1 AT1G50140 32.716 324 182 9 91 386 594 909 4.76e-41 156
MS.gene041770.t1 AT1G50140 32.716 324 182 9 91 386 594 909 4.76e-41 156
MS.gene041770.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene041770.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene041770.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene041770.t1 AT3G01610 36.546 249 137 3 157 391 222 463 1.39e-40 154
MS.gene041770.t1 AT3G01610 37.991 229 137 3 163 390 523 747 2.09e-38 148
MS.gene041770.t1 AT3G01610 36.546 249 137 3 157 391 222 463 1.48e-40 154
MS.gene041770.t1 AT3G01610 37.991 229 137 3 163 390 523 747 2.09e-38 148
MS.gene041770.t1 AT5G08470 36.889 225 139 1 167 391 843 1064 2.72e-40 154
MS.gene041770.t1 AT5G08470 36.889 225 139 1 167 391 834 1055 2.74e-40 154
MS.gene041770.t1 AT4G28000 35.878 262 149 7 143 391 483 738 2.36e-39 150
MS.gene041770.t1 AT1G64110 35.193 233 145 3 161 391 514 742 2.96e-39 150
MS.gene041770.t1 AT1G64110 35.193 233 145 3 161 391 514 742 2.96e-39 150
MS.gene041770.t1 AT4G28000 36.681 229 138 4 165 391 517 740 2.99e-39 150
MS.gene041770.t1 AT1G64110 35.193 233 145 3 161 391 509 737 3.13e-39 150
MS.gene041770.t1 AT1G64110 35.193 233 145 3 161 391 512 740 3.21e-39 150
MS.gene041770.t1 AT1G64110 35.193 233 145 3 161 391 512 740 3.21e-39 150
MS.gene041770.t1 AT4G28000 36.681 229 138 4 165 391 517 740 3.60e-39 150
MS.gene041770.t1 AT3G19740 32.716 324 182 9 91 386 606 921 7.45e-39 149
MS.gene041770.t1 AT2G34560 32.917 240 157 3 153 391 88 324 1.15e-38 144
MS.gene041770.t1 AT2G34560 32.917 240 157 3 153 391 97 333 1.50e-38 144
MS.gene041770.t1 AT2G27600 36.100 241 144 7 145 382 109 342 1.68e-38 144
MS.gene041770.t1 AT5G52882 34.363 259 153 6 145 391 484 737 1.75e-37 145
MS.gene041770.t1 AT4G02480 35.498 231 140 5 165 391 960 1185 4.43e-37 144
MS.gene041770.t1 AT2G45500 33.884 242 149 6 154 391 69 303 3.88e-36 136
MS.gene041770.t1 AT2G45500 33.884 242 149 6 154 391 69 303 3.88e-36 136
MS.gene041770.t1 AT4G24860 35.345 232 141 5 164 391 816 1042 5.60e-36 141
MS.gene041770.t1 AT4G24860 35.345 232 141 5 164 391 789 1015 5.70e-36 141
MS.gene041770.t1 AT1G02890 33.462 260 161 7 165 419 941 1193 6.06e-36 141
MS.gene041770.t1 AT1G79560 35.652 230 134 3 188 408 512 736 6.14e-36 141
MS.gene041770.t1 AT4G24860 35.345 232 141 5 164 391 814 1040 6.44e-36 141
MS.gene041770.t1 AT4G24860 35.345 232 141 5 164 391 812 1038 6.62e-36 141
MS.gene041770.t1 AT1G79560 35.652 230 134 3 188 408 512 736 7.06e-36 140
MS.gene041770.t1 AT1G79560 35.652 230 134 3 188 408 512 736 8.07e-36 140
MS.gene041770.t1 AT2G45500 33.884 242 149 6 154 391 202 436 2.38e-35 136
MS.gene041770.t1 AT2G45500 33.884 242 149 6 154 391 206 440 2.74e-35 136
MS.gene041770.t1 AT2G45500 33.884 242 149 6 154 391 212 446 3.43e-35 136
MS.gene041770.t1 AT2G03670 31.667 240 157 3 169 402 23 261 3.02e-34 132
MS.gene041770.t1 AT2G03670 39.355 155 93 1 150 303 268 422 6.73e-28 115
MS.gene041770.t1 AT4G04910 35.223 247 129 6 191 409 239 482 1.53e-33 133
MS.gene041770.t1 AT3G27120 30.742 283 170 8 146 409 381 656 1.72e-33 133
MS.gene041770.t1 AT4G04180 30.603 232 142 6 164 385 310 532 1.10e-26 112
MS.gene041770.t1 AT4G04180 30.603 232 142 6 164 385 315 537 1.21e-26 112
MS.gene041770.t1 AT1G62130 30.417 240 134 7 165 397 743 956 3.58e-26 112
MS.gene041770.t1 AT1G62130 30.417 240 134 7 165 397 750 963 3.93e-26 112
MS.gene041770.t1 AT1G02890 30.000 260 142 8 165 419 941 1165 1.60e-23 104
MS.gene041770.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.24e-23 102
MS.gene041770.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.66e-23 102
MS.gene041770.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.66e-23 102
MS.gene041770.t1 AT5G08470 36.486 148 91 1 167 314 843 987 8.40e-22 99.0
MS.gene041770.t1 AT3G04340 33.333 204 129 5 150 348 763 964 5.72e-20 93.2
MS.gene041770.t1 AT5G16930 32.895 152 94 5 201 351 397 541 2.70e-13 72.4
MS.gene041770.t1 AT2G18330 33.793 145 88 5 201 344 384 521 5.54e-13 71.2
MS.gene041770.t1 AT3G03060 32.278 158 99 5 195 351 379 529 8.71e-13 70.5

Find 96 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGTAGACCATATATT+TGG 0.125735 1.1:+68962866 None:intergenic
CTTCACATTGATAACATATT+TGG 0.151421 1.1:+68964739 None:intergenic
GATGGTTCGTGAACTGTTTC+AGG 0.169232 1.1:-68963963 MS.gene041770:intron
TTGGATCGTAAAGTTGAATT+TGG 0.208227 1.1:-68963329 MS.gene041770:CDS
AGGAATCTGGATCTGATATT+TGG 0.262951 1.1:+68964370 None:intergenic
CCAAAGGGTGTGCTTTGTTA+TGG 0.289972 1.1:-68964103 MS.gene041770:CDS
TGGGAGTTGCACTGAACTTC+TGG 0.300224 1.1:+68962886 None:intergenic
TATTTGGCATCTTCAGAGTT+TGG 0.307446 1.1:+68964755 None:intergenic
ATGTTCTTACCAGTGGAGTT+TGG 0.317080 1.1:+68963206 None:intergenic
ATCCAGCACTATTGCGGCCT+GGG 0.338212 1.1:-68963355 MS.gene041770:CDS
GATATCCCTTTCACAGTTCA+TGG 0.347039 1.1:+68963256 None:intergenic
TGATGATTTCAGTTTGTTGT+TGG 0.350814 1.1:-68964561 MS.gene041770:intron
AGGAACTGGCAAAACACTTT+TGG 0.351355 1.1:-68964074 MS.gene041770:CDS
GCAGGAGGAGCAGCCTCTTC+AGG 0.355558 1.1:-68964894 MS.gene041770:intron
TGTTCTTACCAGTGGAGTTT+GGG 0.362266 1.1:+68963207 None:intergenic
TTCCACTTTACGCAGGGTTT+GGG 0.364518 1.1:-68965404 MS.gene041770:intron
CAGTGCAACTCCCAAATATA+TGG 0.366186 1.1:-68962877 MS.gene041770:CDS
CTCTGTTACAGTCTTCCTTC+GGG 0.367385 1.1:+68962950 None:intergenic
CCAAGCTTGACAAATTTCTC+TGG 0.370248 1.1:+68964136 None:intergenic
TCTCTGTTACAGTCTTCCTT+CGG 0.371200 1.1:+68962949 None:intergenic
TCTCTCTAGGAGCTGATATA+AGG 0.379334 1.1:-68963010 MS.gene041770:intron
TTTGATGAAATTGATGCAAT+TGG 0.393532 1.1:-68963821 MS.gene041770:CDS
GATCCAGCACTATTGCGGCC+TGG 0.393592 1.1:-68963356 MS.gene041770:CDS
GATGATTTCAGTTTGTTGTT+GGG 0.401893 1.1:-68964560 MS.gene041770:intron
GGAGAAGGAAATTAAAGATA+TGG 0.402101 1.1:-68965354 MS.gene041770:CDS
CCAGAGAAATTTGTCAAGCT+TGG 0.404730 1.1:-68964136 MS.gene041770:CDS
CGCCCAGGCCGCAATAGTGC+TGG 0.424492 1.1:+68963353 None:intergenic
TGTTATGGTCCACCAGGAAC+TGG 0.429324 1.1:-68964088 MS.gene041770:CDS
GAAATTGTGAATCAGCTTGA+TGG 0.438120 1.1:-68963740 MS.gene041770:CDS
CAATTGTAGACCATATATTT+GGG 0.438846 1.1:+68962867 None:intergenic
CCATAACAAAGCACACCCTT+TGG 0.448130 1.1:+68964103 None:intergenic
TTTCAGTTTGTTGTTGGGCT+AGG 0.455935 1.1:-68964555 MS.gene041770:intron
ACATCATTATATGTCACATC+TGG 0.470282 1.1:+68964296 None:intergenic
TAGAGGAAGGAATGCGTGTT+GGG 0.476572 1.1:-68964509 MS.gene041770:intron
ACTATTGCGGCCTGGGCGAT+TGG 0.479348 1.1:-68963348 MS.gene041770:CDS
GGTATCAAGGAGTCTGATAC+TGG 0.483066 1.1:-68964965 MS.gene041770:CDS
TTTCTCTTCAACTGTCATCA+TGG 0.485919 1.1:+68964319 None:intergenic
TGTTGTAATAATAGGTATCA+AGG 0.499629 1.1:-68964978 MS.gene041770:intron
TGTGTCCTACTCTCTAGATC+AGG 0.503167 1.1:+68963302 None:intergenic
ATTCCTTCCTCTATGTCGGT+GGG 0.505296 1.1:+68964519 None:intergenic
CGGCTTTGCCCAAACTCCAC+TGG 0.507108 1.1:-68963215 MS.gene041770:intron
TTCTGATAAGCAAATGATGC+AGG 0.509435 1.1:-68964912 MS.gene041770:CDS
AGTGCTGGATCCAAAGTGTC+AGG 0.511055 1.1:+68963368 None:intergenic
TTACAGTCTTCCTTCGGGCA+CGG 0.513244 1.1:+68962955 None:intergenic
TAATGATGTTGGTGGTTGTA+AGG 0.514610 1.1:-68964282 MS.gene041770:CDS
CGAGAACCATGAACTGTGAA+AGG 0.515979 1.1:-68963262 MS.gene041770:CDS
GATGAAATTGATGCAATTGG+AGG 0.529693 1.1:-68963818 MS.gene041770:CDS
GTTCAGAAATATGTTGGTGA+GGG 0.534000 1.1:-68963992 MS.gene041770:CDS
CATTCCTTCCTCTATGTCGG+TGG 0.534424 1.1:+68964518 None:intergenic
GCAGTGAATAAAGTCATCAA+AGG 0.537155 1.1:-68962912 MS.gene041770:CDS
TTCCTTCCTCTATGTCGGTG+GGG 0.540944 1.1:+68964520 None:intergenic
GAAACAAGATCCCACTGGCT+TGG 0.541173 1.1:+68964932 None:intergenic
TCCTTCCTCTATGTCGGTGG+GGG 0.543622 1.1:+68964521 None:intergenic
AAATTGTGAATCAGCTTGAT+GGG 0.544829 1.1:-68963739 MS.gene041770:CDS
GTGCTTTGTTATGGTCCACC+AGG 0.550033 1.1:-68964094 MS.gene041770:CDS
AGGAGTGTGTGCACTGAAGC+TGG 0.550291 1.1:-68962990 MS.gene041770:CDS
TGTTGTTGGGCTAGGAGACA+AGG 0.552446 1.1:-68964547 MS.gene041770:CDS
AAATTTCTCTGGATGAAGCA+TGG 0.554156 1.1:+68964147 None:intergenic
AATTTCTCTGGATGAAGCAT+GGG 0.557842 1.1:+68964148 None:intergenic
TGACTTTATTCACTGCATCA+AGG 0.571386 1.1:+68962919 None:intergenic
GCCGAGCAAGAAGCTCAAAA+CGG 0.571922 1.1:+68963234 None:intergenic
CAGTGAATAAAGTCATCAAA+GGG 0.573521 1.1:-68962911 MS.gene041770:CDS
CGATTTGACGATGGTGTTGG+TGG 0.576969 1.1:-68963791 MS.gene041770:CDS
CTTGGAATTGATCCTCCAAA+GGG 0.577450 1.1:-68964118 MS.gene041770:CDS
TAACAAAGCACACCCTTTGG+AGG 0.580223 1.1:+68964106 None:intergenic
GAACTTGTTCAGAAATATGT+TGG 0.580468 1.1:-68963998 MS.gene041770:CDS
ACTGTCATCATGGTAACACT+TGG 0.582359 1.1:+68964329 None:intergenic
ACTTTACGATCCAATCGCCC+AGG 0.582511 1.1:+68963338 None:intergenic
ACGCATTCCTTCCTCTATGT+CGG 0.584785 1.1:+68964515 None:intergenic
TCCTACTCTCTAGATCAGGC+AGG 0.591282 1.1:+68963306 None:intergenic
GTCTAGCTACACCAAGCCAG+TGG 0.594456 1.1:-68964943 MS.gene041770:CDS
AGCGATATCATCCTCATCGA+GGG 0.595291 1.1:+68966757 None:intergenic
GCACGATTTGACGATGGTGT+TGG 0.598895 1.1:-68963794 MS.gene041770:CDS
ATAGAGGAAGGAATGCGTGT+TGG 0.599136 1.1:-68964510 MS.gene041770:CDS
GCTTGGAATTGATCCTCCAA+AGG 0.599971 1.1:-68964119 MS.gene041770:CDS
GAGAACCATGAACTGTGAAA+GGG 0.600004 1.1:-68963261 MS.gene041770:CDS
CTTTGGATCCAGCACTATTG+CGG 0.600136 1.1:-68963361 MS.gene041770:CDS
TGTTCAGAAATATGTTGGTG+AGG 0.604104 1.1:-68963993 MS.gene041770:CDS
AGTTCTATTAGCAACAGCCC+TGG 0.605396 1.1:+68964051 None:intergenic
TTCAGAAATATGTTGGTGAG+GGG 0.607694 1.1:-68963991 MS.gene041770:CDS
CTTGATGGGTTTGATGCTCG+AGG 0.608897 1.1:-68963725 MS.gene041770:CDS
TGGTGTTGGTGGTGATAATG+AGG 0.617118 1.1:-68963780 MS.gene041770:CDS
TCAGAAATATGTTGGTGAGG+GGG 0.626431 1.1:-68963990 MS.gene041770:CDS
TATCAGAAACAAGATCCCAC+TGG 0.635585 1.1:+68964927 None:intergenic
GTGACATATAATGATGTTGG+TGG 0.636496 1.1:-68964290 MS.gene041770:CDS
GATGTGACATATAATGATGT+TGG 0.638506 1.1:-68964293 MS.gene041770:CDS
TGATAAGCAAATGATGCAGG+AGG 0.645808 1.1:-68964909 MS.gene041770:CDS
CAATGTGAAGCAGATTGCAA+AGG 0.648835 1.1:-68964726 MS.gene041770:intron
GCCTGCCTGATCTAGAGAGT+AGG 0.658383 1.1:-68963307 MS.gene041770:CDS
TCTAGCTACACCAAGCCAGT+GGG 0.668948 1.1:-68964942 MS.gene041770:CDS
GCGATATCATCCTCATCGAG+GGG 0.669572 1.1:+68966758 None:intergenic
TGTATGCTATCCGTGCCCGA+AGG 0.670697 1.1:-68962965 MS.gene041770:CDS
GAGCGATATCATCCTCATCG+AGG 0.687687 1.1:+68966756 None:intergenic
CGATATCATCCTCATCGAGG+GGG 0.719492 1.1:+68966759 None:intergenic
GGAGGTGCACGATTTGACGA+TGG 0.742439 1.1:-68963800 MS.gene041770:CDS
AAGAAAGTGAATGACTTGTG+TGG 0.760698 1.1:-68965329 MS.gene041770:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTGCTTTTATTATTTAT+AGG - chr1.1:68964837-68964856 MS.gene041770:intron 15.0%
!!! TTATCATAAGAGTTATTTTT+TGG + chr1.1:68965196-68965215 None:intergenic 15.0%
!! AAAACAAAGCTATATAAAAC+AGG + chr1.1:68965744-68965763 None:intergenic 20.0%
!! AATTGAAATAGAACAGAAAT+TGG + chr1.1:68962991-68963010 None:intergenic 20.0%
!! ATTGAAATAGAACAGAAATT+GGG + chr1.1:68962990-68963009 None:intergenic 20.0%
!! CAAAGTTTGTAATTTCATAT+AGG - chr1.1:68963233-68963252 MS.gene041770:CDS 20.0%
!! CAAATTTATTCTTAAACTGA+AGG - chr1.1:68964551-68964570 MS.gene041770:CDS 20.0%
!! CTTCAGTTTAAGAATAAATT+TGG + chr1.1:68964553-68964572 None:intergenic 20.0%
!! GAATTAATGAAATTCGTTTA+AGG - chr1.1:68963088-68963107 MS.gene041770:intron 20.0%
!! TAGATAATTGGATATTATGT+AGG - chr1.1:68964580-68964599 MS.gene041770:intron 20.0%
!! TTACAAAAAAAAATTACGCT+CGG - chr1.1:68965069-68965088 MS.gene041770:intron 20.0%
!! TTCAATAAATGACCATATTT+AGG + chr1.1:68964867-68964886 None:intergenic 20.0%
!!! CAATTGTGGATTTTTTTTTT+GGG - chr1.1:68963011-68963030 MS.gene041770:intron 20.0%
!!! TATTTATCTTAGAGTATTCT+TGG + chr1.1:68963326-68963345 None:intergenic 20.0%
!!! TCAATTGTGGATTTTTTTTT+TGG - chr1.1:68963010-68963029 MS.gene041770:intron 20.0%
!!! TTACATCTTTTATTTTCTCT+CGG - chr1.1:68964442-68964461 MS.gene041770:intron 20.0%
!!! TTTTTAATACTTGTGGAATA+AGG + chr1.1:68964295-68964314 None:intergenic 20.0%
! AAAATGAAAATAGACAGCAA+AGG + chr1.1:68964489-68964508 None:intergenic 25.0%
! AAATGAAAATAGACAGCAAA+GGG + chr1.1:68964488-68964507 None:intergenic 25.0%
! AAGTATTAAAAAAGTGGAGA+AGG - chr1.1:68964303-68964322 MS.gene041770:CDS 25.0%
! AATATGGTCATTTATTGAAC+AGG - chr1.1:68964868-68964887 MS.gene041770:intron 25.0%
! ACAGTAAAATAGAGAACAAA+GGG + chr1.1:68966029-68966048 None:intergenic 25.0%
! AGAGAAATATACCCAATTAA+GGG + chr1.1:68964528-68964547 None:intergenic 25.0%
! ATGAAATATTAAGAGACATG+TGG - chr1.1:68963896-68963915 MS.gene041770:intron 25.0%
! ATGTTAAGAGTTAAAGTTGT+TGG - chr1.1:68963123-68963142 MS.gene041770:intron 25.0%
! CAACTTTAATTAACAGAATC+AGG + chr1.1:68963043-68963062 None:intergenic 25.0%
! CAATTGTAGACCATATATTT+GGG + chr1.1:68966808-68966827 None:intergenic 25.0%
! CTTAATGAAACCTATTCATT+GGG + chr1.1:68963998-68964017 None:intergenic 25.0%
! GTTCTATTTCAATTCAATTG+TGG - chr1.1:68962997-68963016 MS.gene041770:CDS 25.0%
! TAACTTCCTGTTGTAATAAT+AGG - chr1.1:68964686-68964705 MS.gene041770:intron 25.0%
! TAAGACAAACTACTATGAAT+GGG + chr1.1:68964619-68964638 None:intergenic 25.0%
! TACAGTAAAATAGAGAACAA+AGG + chr1.1:68966030-68966049 None:intergenic 25.0%
! TCAATTGTAGACCATATATT+TGG + chr1.1:68966809-68966828 None:intergenic 25.0%
! TCTTAATGAAACCTATTCAT+TGG + chr1.1:68963999-68964018 None:intergenic 25.0%
! TGTTAAGAGTTAAAGTTGTT+GGG - chr1.1:68963124-68963143 MS.gene041770:intron 25.0%
! TGTTGTAATAATAGGTATCA+AGG - chr1.1:68964694-68964713 MS.gene041770:intron 25.0%
! TTCCACAAGTATTAAAAAAG+TGG - chr1.1:68964297-68964316 MS.gene041770:CDS 25.0%
! TTCCATATTTCACATAACAA+CGG - chr1.1:68965452-68965471 MS.gene041770:intron 25.0%
! TTGATACCTATTATTACAAC+AGG + chr1.1:68964695-68964714 None:intergenic 25.0%
! TTTATAGGAATGCCTAAATA+TGG - chr1.1:68964852-68964871 MS.gene041770:intron 25.0%
! TTTGATGAAATTGATGCAAT+TGG - chr1.1:68965851-68965870 MS.gene041770:intron 25.0%
!! AAAAAGTATATTGGTCAGAA+AGG + chr1.1:68966640-68966659 None:intergenic 25.0%
!! AATGAAATTCGTTTAAGGTA+GGG - chr1.1:68963093-68963112 MS.gene041770:intron 25.0%
!! AGAGAGAACAAAAAGTATAT+TGG + chr1.1:68966649-68966668 None:intergenic 25.0%
!! ATACTGAAGTACTTAAAAGA+TGG + chr1.1:68966531-68966550 None:intergenic 25.0%
!! ATATGCTGTTTAATATGACA+AGG - chr1.1:68965044-68965063 MS.gene041770:intron 25.0%
!! CTTCACATTGATAACATATT+TGG + chr1.1:68964936-68964955 None:intergenic 25.0%
!! GGTTGGTTATTACTATTATT+TGG - chr1.1:68965999-68966018 MS.gene041770:intron 25.0%
!! TAATGAAATTCGTTTAAGGT+AGG - chr1.1:68963092-68963111 MS.gene041770:intron 25.0%
!!! AACTGATGCTTGTTTTATAA+GGG - chr1.1:68965640-68965659 MS.gene041770:intron 25.0%
!!! AATGCTTTTTCTATGATCAA+TGG - chr1.1:68964184-68964203 MS.gene041770:intron 25.0%
!!! ATATACTTTTTGTTCTCTCT+AGG - chr1.1:68966649-68966668 MS.gene041770:intron 25.0%
!!! GAATTTTTAATTTCTCTGCA+AGG - chr1.1:68965490-68965509 MS.gene041770:intron 25.0%
!!! GCTGTCTATTTTCATTTTTA+TGG - chr1.1:68964491-68964510 MS.gene041770:intron 25.0%
!!! TATGAGAAAAAAAGAGCATT+TGG + chr1.1:68966113-68966132 None:intergenic 25.0%
!!! TTTTAAGTACTTCAGTATTC+TGG - chr1.1:68966533-68966552 MS.gene041770:intron 25.0%
AAATGCTTTACAACATTCTG+CGG + chr1.1:68963511-68963530 None:intergenic 30.0%
AAATTGTGAATCAGCTTGAT+GGG - chr1.1:68965933-68965952 MS.gene041770:intron 30.0%
AATGAAAATAGACAGCAAAG+GGG + chr1.1:68964487-68964506 None:intergenic 30.0%
ACATAACAACGGAAATGAAT+TGG - chr1.1:68965463-68965482 MS.gene041770:intron 30.0%
ACATCATTATATGTCACATC+TGG + chr1.1:68965379-68965398 None:intergenic 30.0%
AGAAAAAAAATCACCTGAAG+AGG + chr1.1:68964794-68964813 None:intergenic 30.0%
ATTGTTAATATACCGTGATG+CGG - chr1.1:68963205-68963224 MS.gene041770:intron 30.0%
CAGTGAATAAAGTCATCAAA+GGG - chr1.1:68966761-68966780 MS.gene041770:CDS 30.0%
CTAAGACAAACTACTATGAA+TGG + chr1.1:68964620-68964639 None:intergenic 30.0%
GAGAGAAATATACCCAATTA+AGG + chr1.1:68964529-68964548 None:intergenic 30.0%
GATAATGAAAGGCAAAATCA+AGG - chr1.1:68966153-68966172 MS.gene041770:intron 30.0%
GATGTGACATATAATGATGT+TGG - chr1.1:68965379-68965398 MS.gene041770:CDS 30.0%
GGAGAAGGAAATTAAAGATA+TGG - chr1.1:68964318-68964337 MS.gene041770:CDS 30.0%
GTGTGTAACTATGTATTTAG+TGG - chr1.1:68964039-68964058 MS.gene041770:CDS 30.0%
GTTGTTACTCTTCTTTCTTT+GGG + chr1.1:68965226-68965245 None:intergenic 30.0%
TGAAGGAACAACTAGATAAT+TGG - chr1.1:68964568-68964587 MS.gene041770:intron 30.0%
TGGGTACACTTAGTAATTAA+AGG + chr1.1:68963979-68963998 None:intergenic 30.0%
TGTTGTTACTCTTCTTTCTT+TGG + chr1.1:68965227-68965246 None:intergenic 30.0%
TTATCATTGTTTCCATCATC+TGG - chr1.1:68965763-68965782 MS.gene041770:intron 30.0%
TTCCGTTGTTATGTGAAATA+TGG + chr1.1:68965457-68965476 None:intergenic 30.0%
TTGGATCGTAAAGTTGAATT+TGG - chr1.1:68966343-68966362 MS.gene041770:intron 30.0%
TTGTAAGTGATCCCTTAATT+GGG - chr1.1:68964514-68964533 MS.gene041770:CDS 30.0%
TTTGTGTAAATTGATGCTTG+TGG - chr1.1:68963152-68963171 MS.gene041770:intron 30.0%
! AATGTTGTAAAGCATTTGGA+AGG - chr1.1:68963514-68963533 MS.gene041770:intron 30.0%
! ATGTTGTAAAGCATTTGGAA+GGG - chr1.1:68963515-68963534 MS.gene041770:intron 30.0%
! GAACTTGTTCAGAAATATGT+TGG - chr1.1:68965674-68965693 MS.gene041770:intron 30.0%
! GCACTTTGAAAAAATTCTAC+AGG + chr1.1:68964824-68964843 None:intergenic 30.0%
! GCTTTTTGTCCACAAATTTT+AGG - chr1.1:68966281-68966300 MS.gene041770:intron 30.0%
! GTAACACTTGGATCAATTTT+TGG + chr1.1:68965334-68965353 None:intergenic 30.0%
!! AGGAAACATCAAAGTTTTGA+TGG - chr1.1:68965967-68965986 MS.gene041770:intron 30.0%
!! GATGATTTCAGTTTGTTGTT+GGG - chr1.1:68965112-68965131 MS.gene041770:intron 30.0%
!! TGATGATTTCAGTTTGTTGT+TGG - chr1.1:68965111-68965130 MS.gene041770:intron 30.0%
!! TTTATTTTCTCTCGGTATTG+TGG - chr1.1:68964450-68964469 MS.gene041770:intron 30.0%
!! TTTCTTGTTTGCTATGTAGA+TGG - chr1.1:68964395-68964414 MS.gene041770:intron 30.0%
!!! CTCCACTTTTTTAATACTTG+TGG + chr1.1:68964302-68964321 None:intergenic 30.0%
!!! GAACTGATGCTTGTTTTATA+AGG - chr1.1:68965639-68965658 MS.gene041770:intron 30.0%
AAAAGATTGATGTGACGCAT+AGG + chr1.1:68964974-68964993 None:intergenic 35.0%
AAATTTCTCTGGATGAAGCA+TGG + chr1.1:68965528-68965547 None:intergenic 35.0%
AACAGAAATTGGGAAACGTA+GGG + chr1.1:68962980-68962999 None:intergenic 35.0%
AAGAGTTAAAGTTGTTGGGT+TGG - chr1.1:68963128-68963147 MS.gene041770:intron 35.0%
AATTTCTCTGGATGAAGCAT+GGG + chr1.1:68965527-68965546 None:intergenic 35.0%
ACAAAAAGCCATGAGCTATA+TGG + chr1.1:68966270-68966289 None:intergenic 35.0%
ACACTGCGATGATGAAATAA+AGG + chr1.1:68965274-68965293 None:intergenic 35.0%
ACTAAGTGTACCCAATGAAT+AGG - chr1.1:68963985-68964004 MS.gene041770:CDS 35.0%
ACTCAAATGATACCAGATGA+TGG + chr1.1:68965778-68965797 None:intergenic 35.0%
ACTGGTAAGAACATAACAAC+TGG - chr1.1:68966475-68966494 MS.gene041770:intron 35.0%
AGAGAGAAAGAGACATACAT+AGG + chr1.1:68962951-68962970 None:intergenic 35.0%
AGAGTTAAAGTTGTTGGGTT+GGG - chr1.1:68963129-68963148 MS.gene041770:intron 35.0%
AGGAATCTGGATCTGATATT+TGG + chr1.1:68965305-68965324 None:intergenic 35.0%
AGGTCTAGAAGGACTATAAA+AGG + chr1.1:68963374-68963393 None:intergenic 35.0%
AGTTGTTATGTTCTTACCAG+TGG + chr1.1:68966476-68966495 None:intergenic 35.0%
ATAGTCCTTCTAGACCTAAT+GGG - chr1.1:68963377-68963396 MS.gene041770:intron 35.0%
CAGAAAGCAAGTGATGTTTA+TGG - chr1.1:68964099-68964118 MS.gene041770:CDS 35.0%
CTGGTAAGAACATAACAACT+GGG - chr1.1:68966476-68966495 MS.gene041770:intron 35.0%
GAAATTGTGAATCAGCTTGA+TGG - chr1.1:68965932-68965951 MS.gene041770:intron 35.0%
GATGAAATTGATGCAATTGG+AGG - chr1.1:68965854-68965873 MS.gene041770:intron 35.0%
GCAGTGAATAAAGTCATCAA+AGG - chr1.1:68966760-68966779 MS.gene041770:CDS 35.0%
GGTTTCATTAAGAGTTAACG+AGG - chr1.1:68964006-68964025 MS.gene041770:CDS 35.0%
GTGACATATAATGATGTTGG+TGG - chr1.1:68965382-68965401 MS.gene041770:CDS 35.0%
GTTGTAAGTGATCCCTTAAT+TGG - chr1.1:68964513-68964532 MS.gene041770:CDS 35.0%
TATAGTCCTTCTAGACCTAA+TGG - chr1.1:68963376-68963395 MS.gene041770:intron 35.0%
TATTTGGCATCTTCAGAGTT+TGG + chr1.1:68964920-68964939 None:intergenic 35.0%
TCTAGAAGGACTATAAAAGG+AGG + chr1.1:68963371-68963390 None:intergenic 35.0%
TGACTTTATTCACTGCATCA+AGG + chr1.1:68966756-68966775 None:intergenic 35.0%
TGTTCAGAAATATGTTGGTG+AGG - chr1.1:68965679-68965698 MS.gene041770:intron 35.0%
TTCTGATAAGCAAATGATGC+AGG - chr1.1:68964760-68964779 MS.gene041770:CDS 35.0%
TTTCTCTTCAACTGTCATCA+TGG + chr1.1:68965356-68965375 None:intergenic 35.0%
TTTGTCTTAGTTGCTTGAGT+TGG - chr1.1:68964630-68964649 MS.gene041770:intron 35.0%
! AAACGCGGATTATAGCTTAA+TGG + chr1.1:68963424-68963443 None:intergenic 35.0%
! AAATTTTAGGCCTGACACTT+TGG - chr1.1:68966294-68966313 MS.gene041770:intron 35.0%
! AACGCGGATTATAGCTTAAT+GGG + chr1.1:68963423-68963442 None:intergenic 35.0%
! AAGAAAGTGAATGACTTGTG+TGG - chr1.1:68964343-68964362 MS.gene041770:CDS 35.0%
! AAGATGTTGGTTGTTTGTAC+AGG - chr1.1:68963446-68963465 MS.gene041770:intron 35.0%
! AGAGACATACATAGGTTTTG+AGG + chr1.1:68962943-68962962 None:intergenic 35.0%
! GAAGTACTTAAAAGATGGTC+AGG + chr1.1:68966526-68966545 None:intergenic 35.0%
! GCAGAATGTTGTAAAGCATT+TGG - chr1.1:68963510-68963529 MS.gene041770:intron 35.0%
! GTTCAGAAATATGTTGGTGA+GGG - chr1.1:68965680-68965699 MS.gene041770:intron 35.0%
! TGTTGTAAAGCATTTGGAAG+GGG - chr1.1:68963516-68963535 MS.gene041770:intron 35.0%
! TTCAGAAATATGTTGGTGAG+GGG - chr1.1:68965681-68965700 MS.gene041770:intron 35.0%
! TTTCTAGTCAAAACTTGTCC+TGG - chr1.1:68966565-68966584 MS.gene041770:intron 35.0%
!! ACACTTGGATCAATTTTTGG+AGG + chr1.1:68965331-68965350 None:intergenic 35.0%
!! TAATGATGTTGGTGGTTGTA+AGG - chr1.1:68965390-68965409 MS.gene041770:CDS 35.0%
!!! AGGACAAGTTTTGACTAGAA+AGG + chr1.1:68966566-68966585 None:intergenic 35.0%
!!! GCTTGTTTTATAAGGGTCAT+TGG - chr1.1:68965647-68965666 MS.gene041770:intron 35.0%
AAAGGTCAAACACGAAGACA+AGG + chr1.1:68965256-68965275 None:intergenic 40.0%
AATCAAGCTAGCAATGAGGT+AGG - chr1.1:68963795-68963814 MS.gene041770:CDS 40.0%
ACTGAAATCATCAAAGCAGC+AGG + chr1.1:68965104-68965123 None:intergenic 40.0%
ACTGTCATCATGGTAACACT+TGG + chr1.1:68965346-68965365 None:intergenic 40.0%
AGCTATATGGTCATCAACAC+AGG + chr1.1:68966257-68966276 None:intergenic 40.0%
AGTGTCAGGCCTAAAATTTG+TGG + chr1.1:68966293-68966312 None:intergenic 40.0%
ATCTAGCTAATACCGAGGTA+AGG - chr1.1:68963677-68963696 MS.gene041770:intron 40.0%
ATGTTCTTACCAGTGGAGTT+TGG + chr1.1:68966469-68966488 None:intergenic 40.0%
CAATGTGAAGCAGATTGCAA+AGG - chr1.1:68964946-68964965 MS.gene041770:CDS 40.0%
CAGTGCAACTCCCAAATATA+TGG - chr1.1:68966795-68966814 MS.gene041770:CDS 40.0%
CATCCTCTTGCGATAATGAA+AGG - chr1.1:68966142-68966161 MS.gene041770:intron 40.0%
CCAAGCTTGACAAATTTCTC+TGG + chr1.1:68965539-68965558 None:intergenic 40.0%
CCAGAGAAATTTGTCAAGCT+TGG - chr1.1:68965536-68965555 MS.gene041770:intron 40.0%
CTTGGAATTGATCCTCCAAA+GGG - chr1.1:68965554-68965573 MS.gene041770:intron 40.0%
CTTTCATTATCGCAAGAGGA+TGG + chr1.1:68966144-68966163 None:intergenic 40.0%
GAACAATCAAGCTAGCAATG+AGG - chr1.1:68963791-68963810 MS.gene041770:CDS 40.0%
GAACAATCTAGCTAATACCG+AGG - chr1.1:68963672-68963691 MS.gene041770:intron 40.0%
GAACAGAAATTGGGAAACGT+AGG + chr1.1:68962981-68963000 None:intergenic 40.0%
GACTTGCACAACTTAGTTGA+GGG - chr1.1:68963553-68963572 MS.gene041770:intron 40.0%
GAGAACCATGAACTGTGAAA+GGG - chr1.1:68966411-68966430 MS.gene041770:intron 40.0%
GATATCCCTTTCACAGTTCA+TGG + chr1.1:68966419-68966438 None:intergenic 40.0%
GCTATATGGTCATCAACACA+GGG + chr1.1:68966256-68966275 None:intergenic 40.0%
TATCAGAAACAAGATCCCAC+TGG + chr1.1:68964748-68964767 None:intergenic 40.0%
TCTCTGTTACAGTCTTCCTT+CGG + chr1.1:68966726-68966745 None:intergenic 40.0%
TGATAAGCAAATGATGCAGG+AGG - chr1.1:68964763-68964782 MS.gene041770:CDS 40.0%
TGTTCTTACCAGTGGAGTTT+GGG + chr1.1:68966468-68966487 None:intergenic 40.0%
TTGCCTTTCATTATCGCAAG+AGG + chr1.1:68966148-68966167 None:intergenic 40.0%
TTGGCGTGCTACATTAATGA+TGG + chr1.1:68966094-68966113 None:intergenic 40.0%
! AGGAACTGGCAAAACACTTT+TGG - chr1.1:68965598-68965617 MS.gene041770:intron 40.0%
! GATTATAGCTTAATGGGCCT+AGG + chr1.1:68963417-68963436 None:intergenic 40.0%
! GATTTGTTCCACTTTACGCA+GGG - chr1.1:68964262-68964281 MS.gene041770:CDS 40.0%
! GTTGTAAAGCATTTGGAAGG+GGG - chr1.1:68963517-68963536 MS.gene041770:intron 40.0%
! TCAGAAATATGTTGGTGAGG+GGG - chr1.1:68965682-68965701 MS.gene041770:intron 40.0%
! TCTCTCTAGGAGCTGATATA+AGG - chr1.1:68966662-68966681 MS.gene041770:intron 40.0%
! TGACTTGCACAACTTAGTTG+AGG - chr1.1:68963552-68963571 MS.gene041770:intron 40.0%
! TTCGTTTAAGGTAGGGTTTC+TGG - chr1.1:68963100-68963119 MS.gene041770:intron 40.0%
!! AACTTGTTACCTCGTGTAGA+TGG - chr1.1:68965799-68965818 MS.gene041770:intron 40.0%
!! AAGTTTTGATGGCAACGAAC+AGG - chr1.1:68965978-68965997 MS.gene041770:intron 40.0%
!! GTTGATGACCATATAGCTCA+TGG - chr1.1:68966259-68966278 MS.gene041770:intron 40.0%
!! TGATTTGTTCCACTTTACGC+AGG - chr1.1:68964261-68964280 MS.gene041770:CDS 40.0%
!! TTTCAGTTTGTTGTTGGGCT+AGG - chr1.1:68965117-68965136 MS.gene041770:intron 40.0%
!!! AAAAGTGTTTTGCCAGTTCC+TGG + chr1.1:68965599-68965618 None:intergenic 40.0%
!!! AATGCACGCCTTTTTTGAAC+GGG + chr1.1:68965825-68965844 None:intergenic 40.0%
!!! CAATGCACGCCTTTTTTGAA+CGG + chr1.1:68965826-68965845 None:intergenic 40.0%
AACTTTGTGCATCCGCATCA+CGG + chr1.1:68963220-68963239 None:intergenic 45.0%
AATCCGCGTTTCGAAGATGT+TGG - chr1.1:68963433-68963452 MS.gene041770:intron 45.0%
ACAGTCGTGTATATCAGTCC+AGG - chr1.1:68963920-68963939 MS.gene041770:intron 45.0%
ACCTATTCAGTGCTCCTACA+AGG - chr1.1:68963293-68963312 MS.gene041770:CDS 45.0%
ACGCATTCCTTCCTCTATGT+CGG + chr1.1:68965160-68965179 None:intergenic 45.0%
AGATAGGATCTACCTGTGCA+AGG - chr1.1:68963633-68963652 MS.gene041770:intron 45.0%
AGCAACTAAGAAGCCTAGCA+AGG + chr1.1:68964158-68964177 None:intergenic 45.0%
AGCGATATCATCCTCATCGA+GGG + chr1.1:68962918-68962937 None:intergenic 45.0%
AGTTCTATTAGCAACAGCCC+TGG + chr1.1:68965624-68965643 None:intergenic 45.0%
ATAGAGGAAGGAATGCGTGT+TGG - chr1.1:68965162-68965181 MS.gene041770:intron 45.0%
ATAGCCTCGCAATCTATACC+TGG + chr1.1:68963941-68963960 None:intergenic 45.0%
ATTCCTTCCTCTATGTCGGT+GGG + chr1.1:68965156-68965175 None:intergenic 45.0%
CAACCAACATCTTCGAAACG+CGG + chr1.1:68963439-68963458 None:intergenic 45.0%
CCATAACAAAGCACACCCTT+TGG + chr1.1:68965572-68965591 None:intergenic 45.0%
CGAGAACCATGAACTGTGAA+AGG - chr1.1:68966410-68966429 MS.gene041770:intron 45.0%
CTCTGTTACAGTCTTCCTTC+GGG + chr1.1:68966725-68966744 None:intergenic 45.0%
CTTTGGATCCAGCACTATTG+CGG - chr1.1:68966311-68966330 MS.gene041770:intron 45.0%
GATGGTTCGTGAACTGTTTC+AGG - chr1.1:68965709-68965728 MS.gene041770:intron 45.0%
GATTCCTGACTTTCCTTGCT+AGG - chr1.1:68964142-68964161 MS.gene041770:CDS 45.0%
GCTTGGAATTGATCCTCCAA+AGG - chr1.1:68965553-68965572 MS.gene041770:intron 45.0%
GGTATCAAGGAGTCTGATAC+TGG - chr1.1:68964707-68964726 MS.gene041770:intron 45.0%
GTACAATCAAGCTAGTGCTG+AGG - chr1.1:68963732-68963751 MS.gene041770:CDS 45.0%
GTAGATGGCCCGTTCAAAAA+AGG - chr1.1:68965814-68965833 MS.gene041770:intron 45.0%
GTATAGATTGCGAGGCTATG+TGG - chr1.1:68963942-68963961 MS.gene041770:intron 45.0%
TAACAAAGCACACCCTTTGG+AGG + chr1.1:68965569-68965588 None:intergenic 45.0%
TAACCAAAGAGAGGCCCATT+AGG + chr1.1:68963394-68963413 None:intergenic 45.0%
TAGAGGAAGGAATGCGTGTT+GGG - chr1.1:68965163-68965182 MS.gene041770:intron 45.0%
TATTCAGTGCTCCTACAAGG+AGG - chr1.1:68963296-68963315 MS.gene041770:CDS 45.0%
TGATGTGGTTGAGTCGTTCT+AGG - chr1.1:68963582-68963601 MS.gene041770:intron 45.0%
TGCAAAGATTCCTCAAAGCC+AGG + chr1.1:68966586-68966605 None:intergenic 45.0%
TGTGTCCTACTCTCTAGATC+AGG + chr1.1:68966373-68966392 None:intergenic 45.0%
TTCCACTTTACGCAGGGTTT+GGG - chr1.1:68964268-68964287 MS.gene041770:CDS 45.0%
TTGCTAGGCTTCTTAGTTGC+TGG - chr1.1:68964157-68964176 MS.gene041770:CDS 45.0%
! AATCAAGCTAGTGCTGAGGT+AGG - chr1.1:68963736-68963755 MS.gene041770:CDS 45.0%
! AGTCAAGCTAGTGCTGAGAT+AGG - chr1.1:68963617-68963636 MS.gene041770:intron 45.0%
! CCAAAGGGTGTGCTTTGTTA+TGG - chr1.1:68965569-68965588 MS.gene041770:intron 45.0%
! TGGCAAAACACTTTTGGCCA+GGG - chr1.1:68965604-68965623 MS.gene041770:intron 45.0%
! TTTGATGGCAACGAACAGGT+TGG - chr1.1:68965982-68966001 MS.gene041770:intron 45.0%
!! CAAAACTTGTCCTGGCTTTG+AGG - chr1.1:68966573-68966592 MS.gene041770:intron 45.0%
!! GGATCAATTTTTGGAGGCAG+AGG + chr1.1:68965325-68965344 None:intergenic 45.0%
!! TCCGTTTTGAGCTTCTTGCT+CGG - chr1.1:68966437-68966456 MS.gene041770:intron 45.0%
!! TCCTTGTAGGAGCACTGAAT+AGG + chr1.1:68963297-68963316 None:intergenic 45.0%
!! TGGTGTTGGTGGTGATAATG+AGG - chr1.1:68965892-68965911 MS.gene041770:intron 45.0%
!! TTGTGCAAGTCAGCTTGTTG+TGG + chr1.1:68963544-68963563 None:intergenic 45.0%
!! TTTTTGGAGGCAGAGGAATC+TGG + chr1.1:68965318-68965337 None:intergenic 45.0%
ACTTTACGATCCAATCGCCC+AGG + chr1.1:68966337-68966356 None:intergenic 50.0%
AGAGGCCCATTAGGTCTAGA+AGG + chr1.1:68963385-68963404 None:intergenic 50.0%
CAGTCCAGGTATAGATTGCG+AGG - chr1.1:68963934-68963953 MS.gene041770:intron 50.0%
CATTCCTTCCTCTATGTCGG+TGG + chr1.1:68965157-68965176 None:intergenic 50.0%
CGATATCATCCTCATCGAGG+GGG + chr1.1:68962916-68962935 None:intergenic 50.0%
CTAATACCGAGGTAAGGACC+TGG - chr1.1:68963683-68963702 MS.gene041770:intron 50.0%
GAAGCCTAGCAAGGAAAGTC+AGG + chr1.1:68964149-68964168 None:intergenic 50.0%
GAGCGATATCATCCTCATCG+AGG + chr1.1:68962919-68962938 None:intergenic 50.0%
GCACGATTTGACGATGGTGT+TGG - chr1.1:68965878-68965897 MS.gene041770:intron 50.0%
GCCGAGCAAGAAGCTCAAAA+CGG + chr1.1:68966441-68966460 None:intergenic 50.0%
GCGATATCATCCTCATCGAG+GGG + chr1.1:68962917-68962936 None:intergenic 50.0%
GGTTGTTTGTACAGGACACG+TGG - chr1.1:68963454-68963473 MS.gene041770:intron 50.0%
GTTCCACTTTACGCAGGGTT+TGG - chr1.1:68964267-68964286 MS.gene041770:CDS 50.0%
TCCTACTCTCTAGATCAGGC+AGG + chr1.1:68966369-68966388 None:intergenic 50.0%
TCTACCTGTGCAAGGTGAGT+TGG - chr1.1:68963641-68963660 MS.gene041770:intron 50.0%
TCTAGCTACACCAAGCCAGT+GGG - chr1.1:68964730-68964749 MS.gene041770:CDS 50.0%
TGGGAGTTGCACTGAACTTC+TGG + chr1.1:68966789-68966808 None:intergenic 50.0%
TGTTATGGTCCACCAGGAAC+TGG - chr1.1:68965584-68965603 MS.gene041770:intron 50.0%
TTACAGTCTTCCTTCGGGCA+CGG + chr1.1:68966720-68966739 None:intergenic 50.0%
TTCCTTCCTCTATGTCGGTG+GGG + chr1.1:68965155-68965174 None:intergenic 50.0%
TTCTTGGAGCTCCTCCTTGT+AGG + chr1.1:68963310-68963329 None:intergenic 50.0%
! AAGTTAGTGCAGTGCTGAGC+GGG - chr1.1:68963858-68963877 MS.gene041770:intron 50.0%
! AATATGTTGGTGAGGGGGCT+CGG - chr1.1:68965687-68965706 MS.gene041770:intron 50.0%
! AGACCTAATGGGCCTCTCTT+TGG - chr1.1:68963388-68963407 MS.gene041770:intron 50.0%
! AGTGCTGGATCCAAAGTGTC+AGG + chr1.1:68966307-68966326 None:intergenic 50.0%
! AGTGTTTTGCCAGTTCCTGG+TGG + chr1.1:68965596-68965615 None:intergenic 50.0%
! CAAGTTAGTGCAGTGCTGAG+CGG - chr1.1:68963857-68963876 MS.gene041770:CDS 50.0%
! CGATTTGACGATGGTGTTGG+TGG - chr1.1:68965881-68965900 MS.gene041770:intron 50.0%
! CTGGCAAAACACTTTTGGCC+AGG - chr1.1:68965603-68965622 MS.gene041770:intron 50.0%
! GAAACAAGATCCCACTGGCT+TGG + chr1.1:68964743-68964762 None:intergenic 50.0%
! GTGCTTTGTTATGGTCCACC+AGG - chr1.1:68965578-68965597 MS.gene041770:intron 50.0%
! TGTTGTTGGGCTAGGAGACA+AGG - chr1.1:68965125-68965144 MS.gene041770:intron 50.0%
!! CTTGATGGGTTTGATGCTCG+AGG - chr1.1:68965947-68965966 MS.gene041770:intron 50.0%
AGTTGAGGGCGAGCTTGATG+TGG - chr1.1:68963567-68963586 MS.gene041770:intron 55.0%
ATCCAGCACTATTGCGGCCT+GGG - chr1.1:68966317-68966336 MS.gene041770:intron 55.0%
CAATGAGGTAGGACCTGACC+GGG - chr1.1:68963806-68963825 MS.gene041770:CDS 55.0%
GCAATGAGGTAGGACCTGAC+CGG - chr1.1:68963805-68963824 MS.gene041770:CDS 55.0%
GCCTGCCTGATCTAGAGAGT+AGG - chr1.1:68966365-68966384 MS.gene041770:intron 55.0%
GGGCCTAGGTAACCAAAGAG+AGG + chr1.1:68963403-68963422 None:intergenic 55.0%
GGGCCTCTCTTTGGTTACCT+AGG - chr1.1:68963397-68963416 MS.gene041770:intron 55.0%
GTCCCAAACCCTGCGTAAAG+TGG + chr1.1:68964273-68964292 None:intergenic 55.0%
GTCTAGCTACACCAAGCCAG+TGG - chr1.1:68964729-68964748 MS.gene041770:CDS 55.0%
TCCTTCCTCTATGTCGGTGG+GGG + chr1.1:68965154-68965173 None:intergenic 55.0%
TGCTGAGGTAGGATGTGGCT+GGG - chr1.1:68963747-68963766 MS.gene041770:CDS 55.0%
TGTATGCTATCCGTGCCCGA+AGG - chr1.1:68966707-68966726 MS.gene041770:intron 55.0%
TTGAACGGGCCATCTACACG+AGG + chr1.1:68965811-68965830 None:intergenic 55.0%
! AGGAGTGTGTGCACTGAAGC+TGG - chr1.1:68966682-68966701 MS.gene041770:intron 55.0%
! AGTTAGTGCAGTGCTGAGCG+GGG - chr1.1:68963859-68963878 MS.gene041770:intron 55.0%
! GCTAGTGCTGAGGTAGGATG+TGG - chr1.1:68963742-68963761 MS.gene041770:CDS 55.0%
! GGAGGTGCACGATTTGACGA+TGG - chr1.1:68965872-68965891 MS.gene041770:intron 55.0%
ACCCAGCCAGGTCCTTACCT+CGG + chr1.1:68963692-68963711 None:intergenic 60.0%
ACCGAGGTAAGGACCTGGCT+GGG - chr1.1:68963688-68963707 MS.gene041770:intron 60.0%
ACTATTGCGGCCTGGGCGAT+TGG - chr1.1:68966324-68966343 MS.gene041770:intron 60.0%
CGGCTTTGCCCAAACTCCAC+TGG - chr1.1:68966457-68966476 MS.gene041770:intron 60.0%
CGTGCCAACTCACCTTGCAC+AGG + chr1.1:68963648-68963667 None:intergenic 60.0%
CTAACTCACCTCACCCAGCC+AGG + chr1.1:68963704-68963723 None:intergenic 60.0%
GATCCAGCACTATTGCGGCC+TGG - chr1.1:68966316-68966335 MS.gene041770:intron 60.0%
GGTTTCCCCCACCGACATAG+AGG - chr1.1:68965146-68965165 MS.gene041770:intron 60.0%
GTGCTGAGGTAGGATGTGGC+TGG - chr1.1:68963746-68963765 MS.gene041770:CDS 60.0%
TACCGAGGTAAGGACCTGGC+TGG - chr1.1:68963687-68963706 MS.gene041770:intron 60.0%
TCCCCCACCGACATAGAGGA+AGG - chr1.1:68965150-68965169 MS.gene041770:intron 60.0%
! GTTAGTGCAGTGCTGAGCGG+GGG - chr1.1:68963860-68963879 MS.gene041770:intron 60.0%
CATCCTCATCGAGGGGGCGA+GGG + chr1.1:68962910-68962929 None:intergenic 65.0%
GCAGGAGGAGCAGCCTCTTC+AGG - chr1.1:68964778-68964797 MS.gene041770:CDS 65.0%
GGTAAGGACCTGGCTGGGTG+AGG - chr1.1:68963693-68963712 MS.gene041770:intron 65.0%
TCATCCTCATCGAGGGGGCG+AGG + chr1.1:68962911-68962930 None:intergenic 65.0%
TCATGCCAGCTCTCCTCGCC+CGG + chr1.1:68963827-68963846 None:intergenic 65.0%
! TGTTGGTGAGGGGGCTCGGA+TGG - chr1.1:68965691-68965710 MS.gene041770:intron 65.0%
AGGTAGGACCTGACCGGGCG+AGG - chr1.1:68963811-68963830 MS.gene041770:CDS 70.0%
CGCCCAGGCCGCAATAGTGC+TGG + chr1.1:68966322-68966341 None:intergenic 70.0%
GAACCCTCGCCCCCTCGATG+AGG - chr1.1:68962904-68962923 MS.gene041770:CDS 70.0%
CCAGCTCTCCTCGCCCGGTC+AGG + chr1.1:68963822-68963841 None:intergenic 75.0%
CCTGACCGGGCGAGGAGAGC+TGG - chr1.1:68963819-68963838 MS.gene041770:CDS 75.0%
! GTGCAGTGCTGAGCGGGGGC+TGG - chr1.1:68963864-68963883 MS.gene041770:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 68962866 68966828 68962866 ID=MS.gene041770
chr1.1 mRNA 68962866 68966828 68962866 ID=MS.gene041770.t1;Parent=MS.gene041770
chr1.1 exon 68966742 68966828 68966742 ID=MS.gene041770.t1.exon1;Parent=MS.gene041770.t1
chr1.1 CDS 68966742 68966828 68966742 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68965330 68965411 68965330 ID=MS.gene041770.t1.exon2;Parent=MS.gene041770.t1
chr1.1 CDS 68965330 68965411 68965330 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68964895 68964986 68964895 ID=MS.gene041770.t1.exon3;Parent=MS.gene041770.t1
chr1.1 CDS 68964895 68964986 68964895 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68964727 68964804 68964727 ID=MS.gene041770.t1.exon4;Parent=MS.gene041770.t1
chr1.1 CDS 68964727 68964804 68964727 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68964510 68964571 68964510 ID=MS.gene041770.t1.exon5;Parent=MS.gene041770.t1
chr1.1 CDS 68964510 68964571 68964510 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68964259 68964403 68964259 ID=MS.gene041770.t1.exon6;Parent=MS.gene041770.t1
chr1.1 CDS 68964259 68964403 68964259 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68963964 68964182 68963964 ID=MS.gene041770.t1.exon7;Parent=MS.gene041770.t1
chr1.1 CDS 68963964 68964182 68963964 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68963695 68963876 68963695 ID=MS.gene041770.t1.exon8;Parent=MS.gene041770.t1
chr1.1 CDS 68963695 68963876 68963695 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68963216 68963391 68963216 ID=MS.gene041770.t1.exon9;Parent=MS.gene041770.t1
chr1.1 CDS 68963216 68963391 68963216 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
chr1.1 exon 68962866 68963023 68962866 ID=MS.gene041770.t1.exon10;Parent=MS.gene041770.t1
chr1.1 CDS 68962866 68963023 68962866 ID=cds.MS.gene041770.t1;Parent=MS.gene041770.t1
Gene Sequence

>MS.gene041770

ATGTCTAATGAACACGAAGACGATCTCAAAGACGAGAAGAACCCTCGCCCCCTCGATGAGGATGATATCGCTCTCCTCAAAACCTATGTATGTCTCTTTCTCTCTCTAAAACCCTACGTTTCCCAATTTCTGTTCTATTTCAATTCAATTGTGGATTTTTTTTTTGGGAATTTTCCTGATTCTGTTAATTAAAGTTGTTACTTTTTGTAAATTTTGCAACTCGAATTAATGAAATTCGTTTAAGGTAGGGTTTCTGGATGTTAAGAGTTAAAGTTGTTGGGTTGGGTTTGTGTAAATTGATGCTTGTGGTAGCTGTGTGAGTGTGAAATATACATGTTAATTGTTAATATACCGTGATGCGGATGCACAAAGTTTGTAATTTCATATAGGAATTGTTCACTTATGTAAAAACAAGTTACAACATGTGACCTATTCAGTGCTCCTACAAGGAGGAGCTCCAAGAATACTCTAAGATAAATATACACTATTTTAGCTAGAAGTGCCTCCTTTTATAGTCCTTCTAGACCTAATGGGCCTCTCTTTGGTTACCTAGGCCCATTAAGCTATAATCCGCGTTTCGAAGATGTTGGTTGTTTGTACAGGACACGTGGAGTCAGTGAACACGTAACTTACATAACTACGCCGCAGAATGTTGTAAAGCATTTGGAAGGGGGACCACAACAAGCTGACTTGCACAACTTAGTTGAGGGCGAGCTTGATGTGGTTGAGTCGTTCTAGGCATGACTTGAACAGTCAAGCTAGTGCTGAGATAGGATCTACCTGTGCAAGGTGAGTTGGCACGACTTGAACAATCTAGCTAATACCGAGGTAAGGACCTGGCTGGGTGAGGTGAGTTAGTATGACTTGTACAATCAAGCTAGTGCTGAGGTAGGATGTGGCTGGGAGAGCTGAGCTAGTATGACTTGAACAATCAAGCTAGCAATGAGGTAGGACCTGACCGGGCGAGGAGAGCTGGCATGACTTGAACAATCAAGTTAGTGCAGTGCTGAGCGGGGGCTGGATAGTCAACATGAAATATTAAGAGACATGTGGTACAGTCGTGTATATCAGTCCAGGTATAGATTGCGAGGCTATGTGGTAAAGCTGTAACCTTTAATTACTAAGTGTACCCAATGAATAGGTTTCATTAAGAGTTAACGAGGTGCTACTAATGTGTGTAACTATGTATTTAGTGGTGACGATGTGATTGCAAAGTCTATTTAATCTGTTCTACAGAAAGCAAGTGATGTTTATGGAGATGTTTTGCTCATTTGTTGATTCCTGACTTTCCTTGCTAGGCTTCTTAGTTGCTGGACTGAATGCTTTTTCTATGATCAATGGTTTTCTGATTATTAGCGCATTTAAATTTGAATAGTCTTTTATGAAATGTTTTGTTGATTTGTTCCACTTTACGCAGGGTTTGGGACCTTATTCCACAAGTATTAAAAAAGTGGAGAAGGAAATTAAAGATATGGCAAAGAAAGTGAATGACTTGTGTGGTATGTGATTAATATTTAGTTTTTTTTTATTTTCTTGTTTGCTATGTAGATGGTTGAAACTGTTTAACTAAAGAAAATTACATCTTTTATTTTCTCTCGGTATTGTGGTTTATTCTATGCCCCTTTGCTGTCTATTTTCATTTTTATGGTTGTAAGTGATCCCTTAATTGGGTATATTTCTCTCTCCAAATTTATTCTTAAACTGAAGGAACAACTAGATAATTGGATATTATGTAGGTGTTTTATTTCGTCCCATTCATAGTAGTTTGTCTTAGTTGCTTGAGTTGGATGCTGTTATCACTTGCACGCTTCGTTAGATGTTAACTTCCTGTTGTAATAATAGGTATCAAGGAGTCTGATACTGGTCTAGCTACACCAAGCCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAGCCTCTTCAGGTGATTTTTTTTCTTTCTCATCCTGTAGAATTTTTTCAAAGTGCTTTTATTATTTATAGGAATGCCTAAATATGGTCATTTATTGAACAGGTTGCAAGATGCACGAAAATTATAAATCCAAACTCTGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCAAAGGTGCCTATGCGTCACATCAATCTTTTCATTTATACTTAATTAATCTATTATATAGATATTTGTTTATCACTCGTTTATATGCTGTTTAATATGACAAGGATTTACAAAAAAAAATTACGCTCGGTCTAATATTCCTGCTGCTTTGATGATTTCAGTTTGTTGTTGGGCTAGGAGACAAGGTTTCCCCCACCGACATAGAGGAAGGAATGCGTGTTGGGTATGTGTCCAAAAAATAACTCTTATGATAATATATCACCCAAAGAAAGAAGAGTAACAACATTATTACCTTGTCTTCGTGTTTGACCTTTATTTCATCATCGCAGTGTTGATAGAACCAAATATCAGATCCAGATTCCTCTGCCTCCAAAAATTGATCCAAGTGTTACCATGATGACAGTTGAAGAGAAACCAGATGTGACATATAATGATGTTGGTGGTTGTAAGGAACAGATTGAAAAGATGCGTGAAGTAAGTTTTTGAAATTTTCCATATTTCACATAACAACGGAAATGAATTGGCACTGAATTTTTAATTTCTCTGCAAGGTTGTTGAACTTCCCATGCTTCATCCAGAGAAATTTGTCAAGCTTGGAATTGATCCTCCAAAGGGTGTGCTTTGTTATGGTCCACCAGGAACTGGCAAAACACTTTTGGCCAGGGCTGTTGCTAATAGAACTGATGCTTGTTTTATAAGGGTCATTGGAAGTGAACTTGTTCAGAAATATGTTGGTGAGGGGGCTCGGATGGTTCGTGAACTGTTTCAGGTAAATGTTTCCTGTTTTATATAGCTTTGTTTTTATCATTGTTTCCATCATCTGGTATCATTTGAGTGAACTTGTTACCTCGTGTAGATGGCCCGTTCAAAAAAGGCGTGCATTGTGTTTTTTGATGAAATTGATGCAATTGGAGGTGCACGATTTGACGATGGTGTTGGTGGTGATAATGAGGTTCAGCGAACTATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCTCGAGGAAACATCAAAGTTTTGATGGCAACGAACAGGTTGGTTATTACTATTATTTGGTTTTCCCTTTGTTCTCTATTTTACTGTAGATGTTATGAAAGCATCTCTCTTTGTATTCATTCATATTTTCCATCATTAATGTAGCACGCCAAATGCTCTTTTTTTCTCATAATGTCTGTCCATCCTCTTGCGATAATGAAAGGCAAAATCAAGGTTGCATTGCTAGTTTGCAACTTCATTTTTAGATGTTTCATTGCTTCATGAGTCATTTTCTTCAATTTGAAAGTTTTACCCTGTGTTGATGACCATATAGCTCATGGCTTTTTGTCCACAAATTTTAGGCCTGACACTTTGGATCCAGCACTATTGCGGCCTGGGCGATTGGATCGTAAAGTTGAATTTGGCCTGCCTGATCTAGAGAGTAGGACACAAATATTCAAGATACACACGAGAACCATGAACTGTGAAAGGGATATCCGTTTTGAGCTTCTTGCTCGGCTTTGCCCAAACTCCACTGGTAAGAACATAACAACTGGGCAATTTTTAATTTAGCTTATACTTCCTGACCATCTTTTAAGTACTTCAGTATTCTGGCTTATGTCCTTTCTAGTCAAAACTTGTCCTGGCTTTGAGGAATCTTTGCAACTTGCTTTCGTTGTCATGAAAAATTAGTGTCCTTTCTGACCAATATACTTTTTGTTCTCTCTAGGAGCTGATATAAGGAGTGTGTGCACTGAAGCTGGTATGTATGCTATCCGTGCCCGAAGGAAGACTGTAACAGAGAAAGACTTCCTTGATGCAGTGAATAAAGTCATCAAAGGGTACCAGAAGTTCAGTGCAACTCCCAAATATATGGTCTACAATTGA
Protein sequence

>MS.gene041770.t1

MSNEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKDMAKKVNDLCGIKESDTGLATPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEIDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN