AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005995

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005995.t1 MTR_8g023550 94.836 426 7 1 1 426 1 411 0.0 820
MS.gene005995.t1 MTR_1g095660 96.104 385 9 1 48 426 1 385 0.0 751
MS.gene005995.t1 MTR_4g094270 53.890 347 149 4 72 411 61 403 6.36e-120 355
MS.gene005995.t1 MTR_3g117230 49.375 320 161 1 103 422 77 395 2.86e-112 335
MS.gene005995.t1 MTR_3g112260 48.607 323 165 1 100 422 71 392 5.09e-112 335
MS.gene005995.t1 MTR_1g083330 52.881 295 136 1 115 409 120 411 2.39e-105 318
MS.gene005995.t1 MTR_4g033235 52.881 295 136 1 115 409 121 412 3.73e-105 318
MS.gene005995.t1 MTR_1g069105 46.628 341 174 3 85 423 112 446 7.09e-105 318
MS.gene005995.t1 MTR_7g099640 46.628 341 174 3 85 423 111 445 1.13e-104 317
MS.gene005995.t1 MTR_3g062510 55.253 257 115 0 146 402 140 396 1.56e-103 313
MS.gene005995.t1 MTR_7g099640 47.742 310 158 1 85 394 111 416 1.74e-100 306
MS.gene005995.t1 MTR_3g062510 61.275 204 79 0 146 349 140 343 5.27e-92 282
MS.gene005995.t1 MTR_1g069105 48.315 267 134 1 85 351 112 374 1.87e-86 269
MS.gene005995.t1 MTR_7g010800 39.051 274 166 1 146 419 187 459 4.11e-64 218
MS.gene005995.t1 MTR_3g115110 43.307 254 143 1 165 418 249 501 2.85e-63 216
MS.gene005995.t1 MTR_1g063380 43.568 241 136 0 151 391 464 704 7.12e-62 214
MS.gene005995.t1 MTR_1g063380 39.768 259 150 4 164 419 204 459 1.87e-58 205
MS.gene005995.t1 MTR_4g094662 41.016 256 150 1 159 414 223 477 1.33e-61 211
MS.gene005995.t1 MTR_6g059690 42.642 265 148 3 154 415 186 449 2.30e-61 211
MS.gene005995.t1 MTR_2g438140 41.016 256 150 1 159 414 220 474 2.50e-61 211
MS.gene005995.t1 MTR_7g101870 42.231 251 145 0 151 401 465 715 6.76e-61 211
MS.gene005995.t1 MTR_7g101870 40.756 238 138 2 164 401 205 439 8.86e-58 203
MS.gene005995.t1 MTR_2g438140 41.016 256 150 1 159 414 280 534 8.61e-61 209
MS.gene005995.t1 MTR_2g095210 43.154 241 137 0 151 391 392 632 7.68e-60 207
MS.gene005995.t1 MTR_2g095210 52.222 90 42 1 160 248 201 290 1.21e-21 98.2
MS.gene005995.t1 MTR_7g089040 41.053 285 161 3 148 426 668 951 1.88e-59 209
MS.gene005995.t1 MTR_7g089040 30.942 223 148 3 170 391 391 608 1.07e-26 113
MS.gene005995.t1 MTR_7g088850 40.496 242 144 0 150 391 267 508 2.67e-58 200
MS.gene005995.t1 MTR_7g088850 27.426 237 160 5 172 404 24 252 1.21e-19 91.7
MS.gene005995.t1 MTR_7g096060 40.892 269 151 4 152 415 227 492 1.33e-57 201
MS.gene005995.t1 MTR_7g078570 42.264 265 149 3 154 415 181 444 1.77e-57 199
MS.gene005995.t1 MTR_4g064350 41.132 265 152 3 154 415 309 572 1.03e-56 200
MS.gene005995.t1 MTR_7g088980 41.322 242 142 0 150 391 121 362 1.40e-56 192
MS.gene005995.t1 MTR_0376s0020 41.107 253 146 2 165 415 1 252 6.03e-56 194
MS.gene005995.t1 MTR_7g088980 41.322 242 142 0 150 391 203 444 1.62e-55 191
MS.gene005995.t1 MTR_7g088980 34.211 152 92 4 244 390 28 176 2.77e-14 75.1
MS.gene005995.t1 MTR_5g069780 40.221 271 154 4 153 418 301 568 1.93e-55 196
MS.gene005995.t1 MTR_7g088980 41.322 242 142 0 150 391 271 512 5.95e-55 191
MS.gene005995.t1 MTR_7g088980 34.513 226 140 4 170 390 22 244 6.24e-30 122
MS.gene005995.t1 MTR_7g088980 41.322 242 142 0 150 391 297 538 1.06e-54 191
MS.gene005995.t1 MTR_7g088980 30.952 252 140 5 170 390 22 270 5.94e-25 107
MS.gene005995.t1 MTR_2g095320 40.741 243 136 4 160 401 147 382 2.10e-54 192
MS.gene005995.t1 MTR_2g095320 36.207 290 160 5 115 401 377 644 5.47e-49 177
MS.gene005995.t1 MTR_3g462930 40.152 264 150 4 160 418 299 559 6.69e-53 189
MS.gene005995.t1 MTR_7g088830 38.028 284 169 3 149 426 642 924 6.92e-53 190
MS.gene005995.t1 MTR_7g088830 37.374 198 110 5 204 396 432 620 8.84e-28 116
MS.gene005995.t1 MTR_6g016600 36.545 301 175 5 123 412 267 562 5.86e-50 179
MS.gene005995.t1 MTR_7g089290 40.254 236 132 6 163 393 637 868 6.97e-50 181
MS.gene005995.t1 MTR_7g089290 40.254 236 132 6 163 393 665 896 9.24e-50 181
MS.gene005995.t1 MTR_8g099605 36.029 272 165 3 159 422 157 427 3.99e-49 177
MS.gene005995.t1 MTR_4g067100 38.976 254 142 5 165 409 380 629 7.52e-49 179
MS.gene005995.t1 MTR_4g067100 38.976 254 142 5 165 409 380 629 7.59e-49 179
MS.gene005995.t1 MTR_3g104470 39.098 266 154 3 157 418 212 473 1.14e-48 176
MS.gene005995.t1 MTR_8g099605 37.500 256 151 3 165 412 404 658 1.20e-48 178
MS.gene005995.t1 MTR_1g028390 37.255 255 155 2 161 415 325 574 1.34e-47 174
MS.gene005995.t1 MTR_2g101290 37.247 247 154 1 159 405 409 654 5.09e-47 172
MS.gene005995.t1 MTR_2g101290 37.903 248 151 3 159 405 409 654 7.58e-47 172
MS.gene005995.t1 MTR_3g104480 39.841 251 147 2 168 418 225 471 1.53e-46 171
MS.gene005995.t1 MTR_2g078630 39.744 234 126 5 167 391 68 295 2.05e-45 169
MS.gene005995.t1 MTR_2g078630 39.744 234 126 5 167 391 596 823 6.22e-45 167
MS.gene005995.t1 MTR_2g007010 36.626 243 149 2 150 390 513 752 3.20e-44 165
MS.gene005995.t1 MTR_2g007010 38.723 235 124 5 167 391 240 464 3.06e-39 150
MS.gene005995.t1 MTR_2g086160 38.618 246 131 9 145 382 112 345 3.98e-43 155
MS.gene005995.t1 MTR_3g096000 37.066 259 156 4 156 408 287 544 7.92e-43 160
MS.gene005995.t1 MTR_5g075340 36.863 255 157 2 164 418 228 478 1.43e-42 160
MS.gene005995.t1 MTR_4g053350 37.860 243 141 7 149 388 111 346 2.88e-42 154
MS.gene005995.t1 MTR_3g023900 31.792 346 172 7 97 409 485 799 3.64e-42 159
MS.gene005995.t1 MTR_3g023900 32.941 255 157 5 167 409 236 488 6.61e-34 135
MS.gene005995.t1 MTR_8g099065 36.522 230 140 3 164 391 533 758 4.17e-42 159
MS.gene005995.t1 MTR_3g092070 38.627 233 131 6 164 391 80 305 4.27e-42 151
MS.gene005995.t1 MTR_4g053350 37.860 243 141 7 149 388 111 346 4.41e-42 154
MS.gene005995.t1 MTR_3g092070 38.627 233 131 6 164 391 80 305 4.97e-42 152
MS.gene005995.t1 MTR_2g086160 38.618 246 131 9 145 382 112 345 7.46e-42 153
MS.gene005995.t1 MTR_3g092080 37.768 233 133 6 164 391 83 308 3.79e-41 150
MS.gene005995.t1 MTR_3g092080 37.768 233 133 6 164 391 83 308 3.86e-41 149
MS.gene005995.t1 MTR_4g011810 37.647 255 138 7 151 391 224 471 4.28e-41 153
MS.gene005995.t1 MTR_5g009840 35.371 229 142 3 165 391 516 740 1.46e-38 148
MS.gene005995.t1 MTR_6g033740 33.101 287 176 6 115 391 443 723 8.52e-38 146
MS.gene005995.t1 MTR_1g099470 36.957 230 136 5 165 391 434 657 2.51e-37 144
MS.gene005995.t1 MTR_1g088730 35.931 231 139 5 165 391 932 1157 3.02e-37 145
MS.gene005995.t1 MTR_3g023890 35.206 267 138 7 150 390 370 627 3.20e-37 144
MS.gene005995.t1 MTR_3g023890 33.182 220 125 7 174 381 103 312 2.48e-27 115
MS.gene005995.t1 MTR_4g096870 34.025 241 152 5 153 391 107 342 3.69e-37 140
MS.gene005995.t1 MTR_1g044600 34.082 267 135 4 152 415 152 380 1.58e-36 140
MS.gene005995.t1 MTR_1g101870 36.364 231 139 5 164 391 556 781 2.27e-36 142
MS.gene005995.t1 MTR_7g075520 34.000 250 138 7 154 391 201 435 2.39e-36 139
MS.gene005995.t1 MTR_3g104490 34.767 279 141 6 144 418 193 434 2.54e-36 141
MS.gene005995.t1 MTR_1g101870 36.364 231 139 5 164 391 504 729 2.59e-36 142
MS.gene005995.t1 MTR_5g075360 33.209 268 171 3 154 417 51 314 3.10e-36 139
MS.gene005995.t1 MTR_1g088750 35.498 231 140 5 165 391 938 1163 3.12e-36 142
MS.gene005995.t1 MTR_1g088750 35.498 231 140 5 165 391 889 1114 3.22e-36 142
MS.gene005995.t1 MTR_5g075360 34.000 250 161 2 168 417 19 264 5.50e-36 138
MS.gene005995.t1 MTR_5g075360 33.209 268 171 3 154 417 227 490 1.14e-35 139
MS.gene005995.t1 MTR_5g075360 34.000 250 161 2 168 417 195 440 2.83e-35 138
MS.gene005995.t1 MTR_3g089100 34.956 226 138 5 165 386 897 1117 3.57e-35 139
MS.gene005995.t1 MTR_3g089100 34.956 226 138 5 165 386 902 1122 3.89e-35 139
MS.gene005995.t1 MTR_3g089100 34.956 226 138 5 165 386 931 1151 4.73e-35 138
MS.gene005995.t1 MTR_8g469460 33.453 278 136 5 144 417 193 425 4.87e-35 137
MS.gene005995.t1 MTR_4g088885 36.255 251 129 6 191 413 249 496 1.08e-34 137
MS.gene005995.t1 MTR_8g056860 34.348 230 137 3 188 408 492 716 1.23e-34 137
MS.gene005995.t1 MTR_6g023875 32.812 256 150 9 146 391 363 606 2.02e-34 135
MS.gene005995.t1 MTR_1g099480 35.111 225 138 5 165 386 468 687 3.46e-34 135
MS.gene005995.t1 MTR_7g088980 33.471 242 118 1 150 391 271 469 7.18e-34 133
MS.gene005995.t1 MTR_7g088980 34.513 226 140 4 170 390 22 244 2.90e-30 122
MS.gene005995.t1 MTR_7g088980 33.471 242 118 1 150 391 297 495 9.18e-34 133
MS.gene005995.t1 MTR_7g088980 30.952 252 140 5 170 390 22 270 3.57e-25 108
MS.gene005995.t1 MTR_5g074850 35.749 207 129 2 197 402 536 739 4.25e-32 129
MS.gene005995.t1 MTR_6g023855 31.557 244 140 8 161 391 242 471 3.98e-31 125
MS.gene005995.t1 MTR_8g099065 38.953 172 99 3 164 333 533 700 1.73e-30 124
MS.gene005995.t1 MTR_4g112600 64.103 78 27 1 169 245 4 81 2.89e-29 109
MS.gene005995.t1 MTR_2g024440 31.034 232 141 6 164 385 213 435 7.54e-29 118
MS.gene005995.t1 MTR_2g024440 31.034 232 141 6 164 385 296 518 1.20e-28 118
MS.gene005995.t1 MTR_2g024440 31.034 232 141 6 164 385 295 517 1.24e-28 118
MS.gene005995.t1 MTR_4g074920 32.743 226 125 7 165 386 669 871 9.17e-28 116
MS.gene005995.t1 MTR_1g099480 37.791 172 100 4 165 333 468 635 1.40e-26 112
MS.gene005995.t1 MTR_6g023865 28.028 289 158 10 159 409 152 428 3.34e-25 107
MS.gene005995.t1 MTR_1g080430 33.508 191 121 6 161 348 673 860 4.69e-21 96.3
MS.gene005995.t1 MTR_1g080430 33.508 191 121 6 161 348 673 860 5.44e-21 96.3
MS.gene005995.t1 MTR_4g083460 33.889 180 96 5 167 327 839 1014 7.08e-20 92.8
MS.gene005995.t1 MTR_8g074160 84.444 45 7 0 141 185 100 144 9.08e-19 83.2
MS.gene005995.t1 MTR_8g074130 52.174 92 17 3 311 400 25 91 1.44e-17 77.8
MS.gene005995.t1 MTR_6g023845 24.742 291 150 10 146 409 97 345 4.01e-16 79.7
MS.gene005995.t1 MTR_8g018640 52.381 84 21 2 317 400 78 142 1.92e-15 73.6
MS.gene005995.t1 MTR_6g005760 27.799 259 151 10 105 351 144 378 1.14e-14 76.3
MS.gene005995.t1 MTR_6g005760 27.799 259 151 10 105 351 272 506 1.33e-14 76.3
MS.gene005995.t1 MTR_4g077880 31.053 190 111 6 175 351 330 512 7.24e-14 73.9
MS.gene005995.t1 MTR_5g020530 34.483 145 87 5 201 344 387 524 1.23e-13 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005995.t1 AT1G53750 96.244 426 16 0 1 426 1 426 0.0 845
MS.gene005995.t1 AT1G53780 87.023 393 50 1 33 425 227 618 0.0 714
MS.gene005995.t1 AT1G53780 87.023 393 50 1 33 425 206 597 0.0 713
MS.gene005995.t1 AT1G53780 87.023 393 50 1 33 425 206 597 0.0 713
MS.gene005995.t1 AT1G53780 87.023 393 50 1 33 425 205 596 0.0 713
MS.gene005995.t1 AT5G19990 53.468 346 150 4 73 411 6 347 4.16e-120 354
MS.gene005995.t1 AT5G19990 49.612 387 181 6 26 411 32 405 7.26e-120 355
MS.gene005995.t1 AT5G19990 49.612 387 181 6 26 411 32 405 7.26e-120 355
MS.gene005995.t1 AT5G20000 53.602 347 150 4 72 411 63 405 2.88e-119 354
MS.gene005995.t1 AT1G45000 48.297 323 166 1 100 422 71 392 1.42e-112 336
MS.gene005995.t1 AT5G43010 48.297 323 166 1 100 422 71 392 1.98e-112 336
MS.gene005995.t1 AT4G29040 46.628 341 174 3 85 423 109 443 1.40e-105 320
MS.gene005995.t1 AT2G20140 46.628 341 174 3 85 423 109 443 1.95e-105 319
MS.gene005995.t1 AT3G05530 52.542 295 137 1 115 409 121 412 1.33e-104 317
MS.gene005995.t1 AT1G09100 52.542 295 137 1 115 409 120 411 1.07e-103 314
MS.gene005995.t1 AT5G58290 54.864 257 116 0 146 402 133 389 1.62e-103 313
MS.gene005995.t1 AT1G45000 47.826 207 108 0 100 306 71 277 1.35e-68 221
MS.gene005995.t1 AT5G42270 44.094 254 141 1 165 418 247 499 1.45e-64 220
MS.gene005995.t1 AT5G15250 39.777 269 161 1 146 414 202 469 2.12e-63 216
MS.gene005995.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene005995.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene005995.t1 AT2G30950 39.925 268 160 1 147 414 206 472 6.91e-63 215
MS.gene005995.t1 AT2G30950 39.925 268 160 1 147 414 210 476 7.73e-63 215
MS.gene005995.t1 AT1G50250 42.913 254 144 1 165 418 259 511 9.36e-63 215
MS.gene005995.t1 AT3G53230 42.629 251 144 0 151 401 464 714 1.53e-61 213
MS.gene005995.t1 AT3G53230 42.128 235 132 3 160 393 199 430 3.50e-57 201
MS.gene005995.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene005995.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene005995.t1 AT1G06430 39.850 266 159 1 149 414 201 465 2.58e-61 211
MS.gene005995.t1 AT5G03340 43.154 241 137 0 151 391 463 703 2.79e-60 210
MS.gene005995.t1 AT5G03340 41.532 248 140 4 160 405 198 442 1.85e-58 205
MS.gene005995.t1 AT5G15250 36.644 292 161 2 146 414 202 492 1.53e-59 202
MS.gene005995.t1 AT3G09840 41.564 243 138 3 164 405 203 442 4.31e-59 206
MS.gene005995.t1 AT3G09840 43.254 252 142 1 151 401 463 714 4.44e-59 206
MS.gene005995.t1 AT1G07510 41.509 265 151 3 154 415 313 576 1.27e-58 205
MS.gene005995.t1 AT3G56690 43.443 244 133 2 149 390 705 945 2.02e-56 201
MS.gene005995.t1 AT3G56690 37.220 223 135 3 170 391 387 605 5.80e-41 155
MS.gene005995.t1 AT2G29080 41.887 265 151 2 153 415 307 570 4.15e-56 198
MS.gene005995.t1 AT3G47060 41.985 262 144 4 165 421 322 580 5.36e-56 198
MS.gene005995.t1 AT5G58870 41.603 262 145 4 165 421 326 584 3.41e-55 196
MS.gene005995.t1 AT1G05910 40.000 245 136 4 164 401 377 617 8.32e-51 184
MS.gene005995.t1 AT3G02450 38.346 266 158 3 160 423 326 587 1.18e-50 181
MS.gene005995.t1 AT2G03670 39.506 243 146 1 150 391 268 510 3.76e-50 179
MS.gene005995.t1 AT2G03670 31.667 240 157 3 169 402 23 261 1.38e-33 133
MS.gene005995.t1 AT1G03000 34.653 303 183 8 102 395 588 884 9.67e-50 181
MS.gene005995.t1 AT5G53170 37.255 255 155 2 161 415 355 604 1.11e-48 177
MS.gene005995.t1 AT5G53540 40.343 233 127 6 164 391 83 308 4.50e-48 169
MS.gene005995.t1 AT2G26140 39.286 252 149 2 167 418 226 473 5.89e-48 174
MS.gene005995.t1 AT4G23940 36.364 264 155 3 159 412 421 681 2.30e-47 174
MS.gene005995.t1 AT3G16290 37.247 247 154 1 159 405 401 646 8.48e-46 169
MS.gene005995.t1 AT3G15120 40.260 231 127 4 167 390 718 944 3.35e-45 168
MS.gene005995.t1 AT3G15120 40.260 231 127 4 167 390 728 954 3.58e-45 168
MS.gene005995.t1 AT4G27680 39.914 233 128 6 164 391 80 305 6.75e-45 160
MS.gene005995.t1 AT5G64580 38.224 259 153 5 156 408 304 561 7.58e-44 164
MS.gene005995.t1 AT1G80350 38.843 242 133 5 159 391 230 465 2.10e-41 154
MS.gene005995.t1 AT1G50140 32.716 324 182 9 91 386 594 909 4.76e-41 156
MS.gene005995.t1 AT1G50140 32.716 324 182 9 91 386 594 909 4.76e-41 156
MS.gene005995.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene005995.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene005995.t1 AT1G50140 32.716 324 182 9 91 386 616 931 5.73e-41 155
MS.gene005995.t1 AT3G01610 36.546 249 137 3 157 391 222 463 1.39e-40 154
MS.gene005995.t1 AT3G01610 37.991 229 137 3 163 390 523 747 2.09e-38 148
MS.gene005995.t1 AT3G01610 36.546 249 137 3 157 391 222 463 1.48e-40 154
MS.gene005995.t1 AT3G01610 37.991 229 137 3 163 390 523 747 2.09e-38 148
MS.gene005995.t1 AT5G08470 36.889 225 139 1 167 391 843 1064 2.72e-40 154
MS.gene005995.t1 AT5G08470 36.889 225 139 1 167 391 834 1055 2.74e-40 154
MS.gene005995.t1 AT4G28000 35.878 262 149 7 143 391 483 738 2.36e-39 150
MS.gene005995.t1 AT1G64110 35.193 233 145 3 161 391 514 742 2.96e-39 150
MS.gene005995.t1 AT1G64110 35.193 233 145 3 161 391 514 742 2.96e-39 150
MS.gene005995.t1 AT4G28000 36.681 229 138 4 165 391 517 740 2.99e-39 150
MS.gene005995.t1 AT1G64110 35.193 233 145 3 161 391 509 737 3.13e-39 150
MS.gene005995.t1 AT1G64110 35.193 233 145 3 161 391 512 740 3.21e-39 150
MS.gene005995.t1 AT1G64110 35.193 233 145 3 161 391 512 740 3.21e-39 150
MS.gene005995.t1 AT4G28000 36.681 229 138 4 165 391 517 740 3.60e-39 150
MS.gene005995.t1 AT3G19740 32.716 324 182 9 91 386 606 921 7.45e-39 149
MS.gene005995.t1 AT2G34560 32.917 240 157 3 153 391 88 324 1.15e-38 144
MS.gene005995.t1 AT2G34560 32.917 240 157 3 153 391 97 333 1.50e-38 144
MS.gene005995.t1 AT2G27600 36.100 241 144 7 145 382 109 342 1.68e-38 144
MS.gene005995.t1 AT5G52882 34.363 259 153 6 145 391 484 737 1.75e-37 145
MS.gene005995.t1 AT4G02480 35.498 231 140 5 165 391 960 1185 4.43e-37 144
MS.gene005995.t1 AT2G45500 33.884 242 149 6 154 391 69 303 3.88e-36 136
MS.gene005995.t1 AT2G45500 33.884 242 149 6 154 391 69 303 3.88e-36 136
MS.gene005995.t1 AT4G24860 35.345 232 141 5 164 391 816 1042 5.60e-36 141
MS.gene005995.t1 AT4G24860 35.345 232 141 5 164 391 789 1015 5.70e-36 141
MS.gene005995.t1 AT1G02890 33.462 260 161 7 165 419 941 1193 6.06e-36 141
MS.gene005995.t1 AT1G79560 35.652 230 134 3 188 408 512 736 6.14e-36 141
MS.gene005995.t1 AT4G24860 35.345 232 141 5 164 391 814 1040 6.44e-36 141
MS.gene005995.t1 AT4G24860 35.345 232 141 5 164 391 812 1038 6.62e-36 141
MS.gene005995.t1 AT1G79560 35.652 230 134 3 188 408 512 736 7.06e-36 140
MS.gene005995.t1 AT1G79560 35.652 230 134 3 188 408 512 736 8.07e-36 140
MS.gene005995.t1 AT2G45500 33.884 242 149 6 154 391 202 436 2.38e-35 136
MS.gene005995.t1 AT2G45500 33.884 242 149 6 154 391 206 440 2.74e-35 136
MS.gene005995.t1 AT2G45500 33.884 242 149 6 154 391 212 446 3.43e-35 136
MS.gene005995.t1 AT2G03670 31.667 240 157 3 169 402 23 261 3.02e-34 132
MS.gene005995.t1 AT2G03670 39.355 155 93 1 150 303 268 422 6.73e-28 115
MS.gene005995.t1 AT4G04910 35.223 247 129 6 191 409 239 482 1.53e-33 133
MS.gene005995.t1 AT3G27120 30.742 283 170 8 146 409 381 656 1.72e-33 133
MS.gene005995.t1 AT4G04180 30.603 232 142 6 164 385 310 532 1.10e-26 112
MS.gene005995.t1 AT4G04180 30.603 232 142 6 164 385 315 537 1.21e-26 112
MS.gene005995.t1 AT1G62130 30.417 240 134 7 165 397 743 956 3.58e-26 112
MS.gene005995.t1 AT1G62130 30.417 240 134 7 165 397 750 963 3.93e-26 112
MS.gene005995.t1 AT1G02890 30.000 260 142 8 165 419 941 1165 1.60e-23 104
MS.gene005995.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.24e-23 102
MS.gene005995.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.66e-23 102
MS.gene005995.t1 AT1G53790 72.603 73 13 1 17 89 9 74 2.66e-23 102
MS.gene005995.t1 AT5G08470 36.486 148 91 1 167 314 843 987 8.40e-22 99.0
MS.gene005995.t1 AT3G04340 33.333 204 129 5 150 348 763 964 5.72e-20 93.2
MS.gene005995.t1 AT5G16930 32.895 152 94 5 201 351 397 541 2.70e-13 72.4
MS.gene005995.t1 AT2G18330 33.793 145 88 5 201 344 384 521 5.54e-13 71.2
MS.gene005995.t1 AT3G03060 32.278 158 99 5 195 351 379 529 8.71e-13 70.5

Find 96 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGTAGACCATATATT+TGG 0.125735 1.3:+66552154 None:intergenic
CTTCACATTGATAACATATT+TGG 0.151421 1.3:+66554027 None:intergenic
GATGGTTCGTGAACTGTTTC+AGG 0.169232 1.3:-66553251 MS.gene005995:intron
TTGGATCGTAAAGTTGAATT+TGG 0.208227 1.3:-66552617 MS.gene005995:CDS
AGGAATCTGGATCTGATATT+TGG 0.262951 1.3:+66553658 None:intergenic
CCAAAGGGTGTGCTTTGTTA+TGG 0.289972 1.3:-66553391 MS.gene005995:CDS
TGGGAGTTGCACTGAACTTC+TGG 0.300224 1.3:+66552174 None:intergenic
TATTTGGCATCTTCAGAGTT+TGG 0.307446 1.3:+66554043 None:intergenic
ATGTTCTTACCAGTGGAGTT+TGG 0.317080 1.3:+66552494 None:intergenic
ATCCAGCACTATTGCGGCCT+GGG 0.338212 1.3:-66552643 MS.gene005995:CDS
GATATCCCTTTCACAGTTCA+TGG 0.347039 1.3:+66552544 None:intergenic
TGATGATTTCAGTTTGTTGT+TGG 0.350814 1.3:-66553849 MS.gene005995:intron
AGGAACTGGCAAAACACTTT+TGG 0.351355 1.3:-66553362 MS.gene005995:CDS
GCAGGAGGAGCAGCCTCTTC+AGG 0.355558 1.3:-66554182 MS.gene005995:intron
TGTTCTTACCAGTGGAGTTT+GGG 0.362266 1.3:+66552495 None:intergenic
TTCCACTTTACGCAGGGTTT+GGG 0.364518 1.3:-66554692 MS.gene005995:intron
CAGTGCAACTCCCAAATATA+TGG 0.366186 1.3:-66552165 MS.gene005995:CDS
CTCTGTTACAGTCTTCCTTC+GGG 0.367385 1.3:+66552238 None:intergenic
CCAAGCTTGACAAATTTCTC+TGG 0.370248 1.3:+66553424 None:intergenic
TCTCTGTTACAGTCTTCCTT+CGG 0.371200 1.3:+66552237 None:intergenic
TCTCTCTAGGAGCTGATATA+AGG 0.379334 1.3:-66552298 MS.gene005995:intron
TTTGATGAAATTGATGCAAT+TGG 0.393532 1.3:-66553109 MS.gene005995:CDS
GATCCAGCACTATTGCGGCC+TGG 0.393592 1.3:-66552644 MS.gene005995:CDS
GATGATTTCAGTTTGTTGTT+GGG 0.401893 1.3:-66553848 MS.gene005995:intron
GGAGAAGGAAATTAAAGATA+TGG 0.402101 1.3:-66554642 MS.gene005995:CDS
CCAGAGAAATTTGTCAAGCT+TGG 0.404730 1.3:-66553424 MS.gene005995:CDS
CGCCCAGGCCGCAATAGTGC+TGG 0.424492 1.3:+66552641 None:intergenic
TGTTATGGTCCACCAGGAAC+TGG 0.429324 1.3:-66553376 MS.gene005995:CDS
GAAATTGTGAATCAGCTTGA+TGG 0.438120 1.3:-66553028 MS.gene005995:CDS
CAATTGTAGACCATATATTT+GGG 0.438846 1.3:+66552155 None:intergenic
CCATAACAAAGCACACCCTT+TGG 0.448130 1.3:+66553391 None:intergenic
TTTCAGTTTGTTGTTGGGCT+AGG 0.455935 1.3:-66553843 MS.gene005995:intron
ACATCATTATATGTCACATC+TGG 0.470282 1.3:+66553584 None:intergenic
TAGAGGAAGGAATGCGTGTT+GGG 0.476572 1.3:-66553797 MS.gene005995:intron
ACTATTGCGGCCTGGGCGAT+TGG 0.479348 1.3:-66552636 MS.gene005995:CDS
GGTATCAAGGAGTCTGATAC+TGG 0.483066 1.3:-66554253 MS.gene005995:CDS
TTTCTCTTCAACTGTCATCA+TGG 0.485919 1.3:+66553607 None:intergenic
TGTTGTAATAATAGGTATCA+AGG 0.499629 1.3:-66554266 MS.gene005995:intron
TGTGTCCTACTCTCTAGATC+AGG 0.503167 1.3:+66552590 None:intergenic
ATTCCTTCCTCTATGTCGGT+GGG 0.505296 1.3:+66553807 None:intergenic
CGGCTTTGCCCAAACTCCAC+TGG 0.507108 1.3:-66552503 MS.gene005995:intron
TTCTGATAAGCAAATGATGC+AGG 0.509435 1.3:-66554200 MS.gene005995:CDS
AGTGCTGGATCCAAAGTGTC+AGG 0.511055 1.3:+66552656 None:intergenic
TTACAGTCTTCCTTCGGGCA+CGG 0.513244 1.3:+66552243 None:intergenic
TAATGATGTTGGTGGTTGTA+AGG 0.514610 1.3:-66553570 MS.gene005995:CDS
CGAGAACCATGAACTGTGAA+AGG 0.515979 1.3:-66552550 MS.gene005995:CDS
GATGAAATTGATGCAATTGG+AGG 0.529693 1.3:-66553106 MS.gene005995:CDS
GTTCAGAAATATGTTGGTGA+GGG 0.534000 1.3:-66553280 MS.gene005995:CDS
CATTCCTTCCTCTATGTCGG+TGG 0.534424 1.3:+66553806 None:intergenic
GCAGTGAATAAAGTCATCAA+AGG 0.537155 1.3:-66552200 MS.gene005995:CDS
TTCCTTCCTCTATGTCGGTG+GGG 0.540944 1.3:+66553808 None:intergenic
GAAACAAGATCCCACTGGCT+TGG 0.541173 1.3:+66554220 None:intergenic
TCCTTCCTCTATGTCGGTGG+GGG 0.543622 1.3:+66553809 None:intergenic
AAATTGTGAATCAGCTTGAT+GGG 0.544829 1.3:-66553027 MS.gene005995:CDS
GTGCTTTGTTATGGTCCACC+AGG 0.550033 1.3:-66553382 MS.gene005995:CDS
AGGAGTGTGTGCACTGAAGC+TGG 0.550291 1.3:-66552278 MS.gene005995:CDS
TGTTGTTGGGCTAGGAGACA+AGG 0.552446 1.3:-66553835 MS.gene005995:CDS
AAATTTCTCTGGATGAAGCA+TGG 0.554156 1.3:+66553435 None:intergenic
AATTTCTCTGGATGAAGCAT+GGG 0.557842 1.3:+66553436 None:intergenic
TGACTTTATTCACTGCATCA+AGG 0.571386 1.3:+66552207 None:intergenic
GCCGAGCAAGAAGCTCAAAA+CGG 0.571922 1.3:+66552522 None:intergenic
CAGTGAATAAAGTCATCAAA+GGG 0.573521 1.3:-66552199 MS.gene005995:CDS
CGATTTGACGATGGTGTTGG+TGG 0.576969 1.3:-66553079 MS.gene005995:CDS
CTTGGAATTGATCCTCCAAA+GGG 0.577450 1.3:-66553406 MS.gene005995:CDS
TAACAAAGCACACCCTTTGG+AGG 0.580223 1.3:+66553394 None:intergenic
GAACTTGTTCAGAAATATGT+TGG 0.580468 1.3:-66553286 MS.gene005995:CDS
ACTGTCATCATGGTAACACT+TGG 0.582359 1.3:+66553617 None:intergenic
ACTTTACGATCCAATCGCCC+AGG 0.582511 1.3:+66552626 None:intergenic
ACGCATTCCTTCCTCTATGT+CGG 0.584785 1.3:+66553803 None:intergenic
TCCTACTCTCTAGATCAGGC+AGG 0.591282 1.3:+66552594 None:intergenic
GTCTAGCTACACCAAGCCAG+TGG 0.594456 1.3:-66554231 MS.gene005995:CDS
AGCGATATCATCCTCATCGA+GGG 0.595291 1.3:+66556045 None:intergenic
GCACGATTTGACGATGGTGT+TGG 0.598895 1.3:-66553082 MS.gene005995:CDS
ATAGAGGAAGGAATGCGTGT+TGG 0.599136 1.3:-66553798 MS.gene005995:CDS
GCTTGGAATTGATCCTCCAA+AGG 0.599971 1.3:-66553407 MS.gene005995:CDS
GAGAACCATGAACTGTGAAA+GGG 0.600004 1.3:-66552549 MS.gene005995:CDS
CTTTGGATCCAGCACTATTG+CGG 0.600136 1.3:-66552649 MS.gene005995:CDS
TGTTCAGAAATATGTTGGTG+AGG 0.604104 1.3:-66553281 MS.gene005995:CDS
AGTTCTATTAGCAACAGCCC+TGG 0.605396 1.3:+66553339 None:intergenic
TTCAGAAATATGTTGGTGAG+GGG 0.607694 1.3:-66553279 MS.gene005995:CDS
CTTGATGGGTTTGATGCTCG+AGG 0.608897 1.3:-66553013 MS.gene005995:CDS
TGGTGTTGGTGGTGATAATG+AGG 0.617118 1.3:-66553068 MS.gene005995:CDS
TCAGAAATATGTTGGTGAGG+GGG 0.626431 1.3:-66553278 MS.gene005995:CDS
TATCAGAAACAAGATCCCAC+TGG 0.635585 1.3:+66554215 None:intergenic
GTGACATATAATGATGTTGG+TGG 0.636496 1.3:-66553578 MS.gene005995:CDS
GATGTGACATATAATGATGT+TGG 0.638506 1.3:-66553581 MS.gene005995:CDS
TGATAAGCAAATGATGCAGG+AGG 0.645808 1.3:-66554197 MS.gene005995:CDS
CAATGTGAAGCAGATTGCAA+AGG 0.648835 1.3:-66554014 MS.gene005995:intron
GCCTGCCTGATCTAGAGAGT+AGG 0.658383 1.3:-66552595 MS.gene005995:CDS
TCTAGCTACACCAAGCCAGT+GGG 0.668948 1.3:-66554230 MS.gene005995:CDS
GCGATATCATCCTCATCGAG+GGG 0.669572 1.3:+66556046 None:intergenic
TGTATGCTATCCGTGCCCGA+AGG 0.670697 1.3:-66552253 MS.gene005995:CDS
GAGCGATATCATCCTCATCG+AGG 0.687687 1.3:+66556044 None:intergenic
CGATATCATCCTCATCGAGG+GGG 0.719492 1.3:+66556047 None:intergenic
GGAGGTGCACGATTTGACGA+TGG 0.742439 1.3:-66553088 MS.gene005995:CDS
AAGAAAGTGAATGACTTGTG+TGG 0.760698 1.3:-66554617 MS.gene005995:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTGCTTTTATTATTTAT+AGG - chr1.3:66554125-66554144 MS.gene005995:intron 15.0%
!!! TTATCATAAGAGTTATTTTT+TGG + chr1.3:66554484-66554503 None:intergenic 15.0%
!! AAAACAAAGCTATATAAAAC+AGG + chr1.3:66555032-66555051 None:intergenic 20.0%
!! AATTGAAATAGAACAGAAAT+TGG + chr1.3:66552279-66552298 None:intergenic 20.0%
!! ATTGAAATAGAACAGAAATT+GGG + chr1.3:66552278-66552297 None:intergenic 20.0%
!! CAAAGTTTGTAATTTCATAT+AGG - chr1.3:66552521-66552540 MS.gene005995:CDS 20.0%
!! CAAATTTATTCTTAAACTGA+AGG - chr1.3:66553839-66553858 MS.gene005995:CDS 20.0%
!! CTTCAGTTTAAGAATAAATT+TGG + chr1.3:66553841-66553860 None:intergenic 20.0%
!! GAATTAATGAAATTCGTTTA+AGG - chr1.3:66552376-66552395 MS.gene005995:intron 20.0%
!! TAGATAATTGGATATTATGT+AGG - chr1.3:66553868-66553887 MS.gene005995:intron 20.0%
!! TTACAAAAAAAAATTACGCT+CGG - chr1.3:66554357-66554376 MS.gene005995:intron 20.0%
!! TTCAATAAATGACCATATTT+AGG + chr1.3:66554155-66554174 None:intergenic 20.0%
!!! CAATTGTGGATTTTTTTTTT+GGG - chr1.3:66552299-66552318 MS.gene005995:intron 20.0%
!!! TATTTATCTTAGAGTATTCT+TGG + chr1.3:66552614-66552633 None:intergenic 20.0%
!!! TCAATTGTGGATTTTTTTTT+TGG - chr1.3:66552298-66552317 MS.gene005995:intron 20.0%
!!! TTACATCTTTTATTTTCTCT+CGG - chr1.3:66553730-66553749 MS.gene005995:intron 20.0%
!!! TTTTTAATACTTGTGGAATA+AGG + chr1.3:66553583-66553602 None:intergenic 20.0%
! AAAATGAAAATAGACAGCAA+AGG + chr1.3:66553777-66553796 None:intergenic 25.0%
! AAATGAAAATAGACAGCAAA+GGG + chr1.3:66553776-66553795 None:intergenic 25.0%
! AAGTATTAAAAAAGTGGAGA+AGG - chr1.3:66553591-66553610 MS.gene005995:CDS 25.0%
! AATATGGTCATTTATTGAAC+AGG - chr1.3:66554156-66554175 MS.gene005995:intron 25.0%
! ACAGTAAAATAGAGAACAAA+GGG + chr1.3:66555317-66555336 None:intergenic 25.0%
! AGAGAAATATACCCAATTAA+GGG + chr1.3:66553816-66553835 None:intergenic 25.0%
! ATGAAATATTAAGAGACATG+TGG - chr1.3:66553184-66553203 MS.gene005995:intron 25.0%
! ATGTTAAGAGTTAAAGTTGT+TGG - chr1.3:66552411-66552430 MS.gene005995:intron 25.0%
! CAACTTTAATTAACAGAATC+AGG + chr1.3:66552331-66552350 None:intergenic 25.0%
! CAATTGTAGACCATATATTT+GGG + chr1.3:66556096-66556115 None:intergenic 25.0%
! CTTAATGAAACCTATTCATT+GGG + chr1.3:66553286-66553305 None:intergenic 25.0%
! GTTCTATTTCAATTCAATTG+TGG - chr1.3:66552285-66552304 MS.gene005995:CDS 25.0%
! TAACTTCCTGTTGTAATAAT+AGG - chr1.3:66553974-66553993 MS.gene005995:intron 25.0%
! TAAGACAAACTACTATGAAT+GGG + chr1.3:66553907-66553926 None:intergenic 25.0%
! TACAGTAAAATAGAGAACAA+AGG + chr1.3:66555318-66555337 None:intergenic 25.0%
! TCAATTGTAGACCATATATT+TGG + chr1.3:66556097-66556116 None:intergenic 25.0%
! TCTTAATGAAACCTATTCAT+TGG + chr1.3:66553287-66553306 None:intergenic 25.0%
! TGTTAAGAGTTAAAGTTGTT+GGG - chr1.3:66552412-66552431 MS.gene005995:intron 25.0%
! TGTTGTAATAATAGGTATCA+AGG - chr1.3:66553982-66554001 MS.gene005995:intron 25.0%
! TTCCACAAGTATTAAAAAAG+TGG - chr1.3:66553585-66553604 MS.gene005995:CDS 25.0%
! TTCCATATTTCACATAACAA+CGG - chr1.3:66554740-66554759 MS.gene005995:intron 25.0%
! TTGATACCTATTATTACAAC+AGG + chr1.3:66553983-66554002 None:intergenic 25.0%
! TTTATAGGAATGCCTAAATA+TGG - chr1.3:66554140-66554159 MS.gene005995:intron 25.0%
! TTTGATGAAATTGATGCAAT+TGG - chr1.3:66555139-66555158 MS.gene005995:intron 25.0%
!! AAAAAGTATATTGGTCAGAA+AGG + chr1.3:66555928-66555947 None:intergenic 25.0%
!! AATGAAATTCGTTTAAGGTA+GGG - chr1.3:66552381-66552400 MS.gene005995:intron 25.0%
!! AGAGAGAACAAAAAGTATAT+TGG + chr1.3:66555937-66555956 None:intergenic 25.0%
!! ATACTGAAGTACTTAAAAGA+TGG + chr1.3:66555819-66555838 None:intergenic 25.0%
!! ATATGCTGTTTAATATGACA+AGG - chr1.3:66554332-66554351 MS.gene005995:intron 25.0%
!! CTTCACATTGATAACATATT+TGG + chr1.3:66554224-66554243 None:intergenic 25.0%
!! GGTTGGTTATTACTATTATT+TGG - chr1.3:66555287-66555306 MS.gene005995:intron 25.0%
!! TAATGAAATTCGTTTAAGGT+AGG - chr1.3:66552380-66552399 MS.gene005995:intron 25.0%
!!! AACTGATGCTTGTTTTATAA+GGG - chr1.3:66554928-66554947 MS.gene005995:intron 25.0%
!!! AATGCTTTTTCTATGATCAA+TGG - chr1.3:66553472-66553491 MS.gene005995:intron 25.0%
!!! ATATACTTTTTGTTCTCTCT+AGG - chr1.3:66555937-66555956 MS.gene005995:intron 25.0%
!!! GAATTTTTAATTTCTCTGCA+AGG - chr1.3:66554778-66554797 MS.gene005995:intron 25.0%
!!! GCTGTCTATTTTCATTTTTA+TGG - chr1.3:66553779-66553798 MS.gene005995:intron 25.0%
!!! TATGAGAAAAAAAGAGCATT+TGG + chr1.3:66555401-66555420 None:intergenic 25.0%
!!! TTTTAAGTACTTCAGTATTC+TGG - chr1.3:66555821-66555840 MS.gene005995:intron 25.0%
AAATGCTTTACAACATTCTG+CGG + chr1.3:66552799-66552818 None:intergenic 30.0%
AAATTGTGAATCAGCTTGAT+GGG - chr1.3:66555221-66555240 MS.gene005995:intron 30.0%
AATGAAAATAGACAGCAAAG+GGG + chr1.3:66553775-66553794 None:intergenic 30.0%
ACATAACAACGGAAATGAAT+TGG - chr1.3:66554751-66554770 MS.gene005995:intron 30.0%
ACATCATTATATGTCACATC+TGG + chr1.3:66554667-66554686 None:intergenic 30.0%
AGAAAAAAAATCACCTGAAG+AGG + chr1.3:66554082-66554101 None:intergenic 30.0%
ATTGTTAATATACCGTGATG+CGG - chr1.3:66552493-66552512 MS.gene005995:intron 30.0%
CAGTGAATAAAGTCATCAAA+GGG - chr1.3:66556049-66556068 MS.gene005995:CDS 30.0%
CTAAGACAAACTACTATGAA+TGG + chr1.3:66553908-66553927 None:intergenic 30.0%
GAGAGAAATATACCCAATTA+AGG + chr1.3:66553817-66553836 None:intergenic 30.0%
GATAATGAAAGGCAAAATCA+AGG - chr1.3:66555441-66555460 MS.gene005995:intron 30.0%
GATGTGACATATAATGATGT+TGG - chr1.3:66554667-66554686 MS.gene005995:CDS 30.0%
GGAGAAGGAAATTAAAGATA+TGG - chr1.3:66553606-66553625 MS.gene005995:CDS 30.0%
GTGTGTAACTATGTATTTAG+TGG - chr1.3:66553327-66553346 MS.gene005995:CDS 30.0%
GTTGTTACTCTTCTTTCTTT+GGG + chr1.3:66554514-66554533 None:intergenic 30.0%
TGAAGGAACAACTAGATAAT+TGG - chr1.3:66553856-66553875 MS.gene005995:intron 30.0%
TGGGTACACTTAGTAATTAA+AGG + chr1.3:66553267-66553286 None:intergenic 30.0%
TGTTGTTACTCTTCTTTCTT+TGG + chr1.3:66554515-66554534 None:intergenic 30.0%
TTATCATTGTTTCCATCATC+TGG - chr1.3:66555051-66555070 MS.gene005995:intron 30.0%
TTCCGTTGTTATGTGAAATA+TGG + chr1.3:66554745-66554764 None:intergenic 30.0%
TTGGATCGTAAAGTTGAATT+TGG - chr1.3:66555631-66555650 MS.gene005995:intron 30.0%
TTGTAAGTGATCCCTTAATT+GGG - chr1.3:66553802-66553821 MS.gene005995:CDS 30.0%
TTTGTGTAAATTGATGCTTG+TGG - chr1.3:66552440-66552459 MS.gene005995:intron 30.0%
! AATGTTGTAAAGCATTTGGA+AGG - chr1.3:66552802-66552821 MS.gene005995:intron 30.0%
! ATGTTGTAAAGCATTTGGAA+GGG - chr1.3:66552803-66552822 MS.gene005995:intron 30.0%
! GAACTTGTTCAGAAATATGT+TGG - chr1.3:66554962-66554981 MS.gene005995:intron 30.0%
! GCACTTTGAAAAAATTCTAC+AGG + chr1.3:66554112-66554131 None:intergenic 30.0%
! GCTTTTTGTCCACAAATTTT+AGG - chr1.3:66555569-66555588 MS.gene005995:intron 30.0%
! GTAACACTTGGATCAATTTT+TGG + chr1.3:66554622-66554641 None:intergenic 30.0%
!! AGGAAACATCAAAGTTTTGA+TGG - chr1.3:66555255-66555274 MS.gene005995:intron 30.0%
!! GATGATTTCAGTTTGTTGTT+GGG - chr1.3:66554400-66554419 MS.gene005995:intron 30.0%
!! TGATGATTTCAGTTTGTTGT+TGG - chr1.3:66554399-66554418 MS.gene005995:intron 30.0%
!! TTTATTTTCTCTCGGTATTG+TGG - chr1.3:66553738-66553757 MS.gene005995:intron 30.0%
!! TTTCTTGTTTGCTATGTAGA+TGG - chr1.3:66553683-66553702 MS.gene005995:intron 30.0%
!!! CTCCACTTTTTTAATACTTG+TGG + chr1.3:66553590-66553609 None:intergenic 30.0%
!!! GAACTGATGCTTGTTTTATA+AGG - chr1.3:66554927-66554946 MS.gene005995:intron 30.0%
AAAAGATTGATGTGACGCAT+AGG + chr1.3:66554262-66554281 None:intergenic 35.0%
AAATTTCTCTGGATGAAGCA+TGG + chr1.3:66554816-66554835 None:intergenic 35.0%
AACAGAAATTGGGAAACGTA+GGG + chr1.3:66552268-66552287 None:intergenic 35.0%
AAGAGTTAAAGTTGTTGGGT+TGG - chr1.3:66552416-66552435 MS.gene005995:intron 35.0%
AATTTCTCTGGATGAAGCAT+GGG + chr1.3:66554815-66554834 None:intergenic 35.0%
ACAAAAAGCCATGAGCTATA+TGG + chr1.3:66555558-66555577 None:intergenic 35.0%
ACACTGCGATGATGAAATAA+AGG + chr1.3:66554562-66554581 None:intergenic 35.0%
ACTAAGTGTACCCAATGAAT+AGG - chr1.3:66553273-66553292 MS.gene005995:CDS 35.0%
ACTCAAATGATACCAGATGA+TGG + chr1.3:66555066-66555085 None:intergenic 35.0%
ACTGGTAAGAACATAACAAC+TGG - chr1.3:66555763-66555782 MS.gene005995:intron 35.0%
AGAGAGAAAGAGACATACAT+AGG + chr1.3:66552239-66552258 None:intergenic 35.0%
AGAGTTAAAGTTGTTGGGTT+GGG - chr1.3:66552417-66552436 MS.gene005995:intron 35.0%
AGGAATCTGGATCTGATATT+TGG + chr1.3:66554593-66554612 None:intergenic 35.0%
AGGTCTAGAAGGACTATAAA+AGG + chr1.3:66552662-66552681 None:intergenic 35.0%
AGTTGTTATGTTCTTACCAG+TGG + chr1.3:66555764-66555783 None:intergenic 35.0%
ATAGTCCTTCTAGACCTAAT+GGG - chr1.3:66552665-66552684 MS.gene005995:intron 35.0%
CAGAAAGCAAGTGATGTTTA+TGG - chr1.3:66553387-66553406 MS.gene005995:CDS 35.0%
CTGGTAAGAACATAACAACT+GGG - chr1.3:66555764-66555783 MS.gene005995:intron 35.0%
GAAATTGTGAATCAGCTTGA+TGG - chr1.3:66555220-66555239 MS.gene005995:intron 35.0%
GATGAAATTGATGCAATTGG+AGG - chr1.3:66555142-66555161 MS.gene005995:intron 35.0%
GCAGTGAATAAAGTCATCAA+AGG - chr1.3:66556048-66556067 MS.gene005995:CDS 35.0%
GGTTTCATTAAGAGTTAACG+AGG - chr1.3:66553294-66553313 MS.gene005995:CDS 35.0%
GTGACATATAATGATGTTGG+TGG - chr1.3:66554670-66554689 MS.gene005995:CDS 35.0%
GTTGTAAGTGATCCCTTAAT+TGG - chr1.3:66553801-66553820 MS.gene005995:CDS 35.0%
TATAGTCCTTCTAGACCTAA+TGG - chr1.3:66552664-66552683 MS.gene005995:intron 35.0%
TATTTGGCATCTTCAGAGTT+TGG + chr1.3:66554208-66554227 None:intergenic 35.0%
TCTAGAAGGACTATAAAAGG+AGG + chr1.3:66552659-66552678 None:intergenic 35.0%
TGACTTTATTCACTGCATCA+AGG + chr1.3:66556044-66556063 None:intergenic 35.0%
TGTTCAGAAATATGTTGGTG+AGG - chr1.3:66554967-66554986 MS.gene005995:intron 35.0%
TTCTGATAAGCAAATGATGC+AGG - chr1.3:66554048-66554067 MS.gene005995:CDS 35.0%
TTTCTCTTCAACTGTCATCA+TGG + chr1.3:66554644-66554663 None:intergenic 35.0%
TTTGTCTTAGTTGCTTGAGT+TGG - chr1.3:66553918-66553937 MS.gene005995:intron 35.0%
! AAACGCGGATTATAGCTTAA+TGG + chr1.3:66552712-66552731 None:intergenic 35.0%
! AAATTTTAGGCCTGACACTT+TGG - chr1.3:66555582-66555601 MS.gene005995:intron 35.0%
! AACGCGGATTATAGCTTAAT+GGG + chr1.3:66552711-66552730 None:intergenic 35.0%
! AAGAAAGTGAATGACTTGTG+TGG - chr1.3:66553631-66553650 MS.gene005995:CDS 35.0%
! AAGATGTTGGTTGTTTGTAC+AGG - chr1.3:66552734-66552753 MS.gene005995:intron 35.0%
! AGAGACATACATAGGTTTTG+AGG + chr1.3:66552231-66552250 None:intergenic 35.0%
! GAAGTACTTAAAAGATGGTC+AGG + chr1.3:66555814-66555833 None:intergenic 35.0%
! GCAGAATGTTGTAAAGCATT+TGG - chr1.3:66552798-66552817 MS.gene005995:intron 35.0%
! GTTCAGAAATATGTTGGTGA+GGG - chr1.3:66554968-66554987 MS.gene005995:intron 35.0%
! TGTTGTAAAGCATTTGGAAG+GGG - chr1.3:66552804-66552823 MS.gene005995:intron 35.0%
! TTCAGAAATATGTTGGTGAG+GGG - chr1.3:66554969-66554988 MS.gene005995:intron 35.0%
! TTTCTAGTCAAAACTTGTCC+TGG - chr1.3:66555853-66555872 MS.gene005995:intron 35.0%
!! ACACTTGGATCAATTTTTGG+AGG + chr1.3:66554619-66554638 None:intergenic 35.0%
!! TAATGATGTTGGTGGTTGTA+AGG - chr1.3:66554678-66554697 MS.gene005995:CDS 35.0%
!!! AGGACAAGTTTTGACTAGAA+AGG + chr1.3:66555854-66555873 None:intergenic 35.0%
!!! GCTTGTTTTATAAGGGTCAT+TGG - chr1.3:66554935-66554954 MS.gene005995:intron 35.0%
AAAGGTCAAACACGAAGACA+AGG + chr1.3:66554544-66554563 None:intergenic 40.0%
AATCAAGCTAGCAATGAGGT+AGG - chr1.3:66553083-66553102 MS.gene005995:CDS 40.0%
ACTGAAATCATCAAAGCAGC+AGG + chr1.3:66554392-66554411 None:intergenic 40.0%
ACTGTCATCATGGTAACACT+TGG + chr1.3:66554634-66554653 None:intergenic 40.0%
AGCTATATGGTCATCAACAC+AGG + chr1.3:66555545-66555564 None:intergenic 40.0%
AGTGTCAGGCCTAAAATTTG+TGG + chr1.3:66555581-66555600 None:intergenic 40.0%
ATCTAGCTAATACCGAGGTA+AGG - chr1.3:66552965-66552984 MS.gene005995:intron 40.0%
ATGTTCTTACCAGTGGAGTT+TGG + chr1.3:66555757-66555776 None:intergenic 40.0%
CAATGTGAAGCAGATTGCAA+AGG - chr1.3:66554234-66554253 MS.gene005995:CDS 40.0%
CAGTGCAACTCCCAAATATA+TGG - chr1.3:66556083-66556102 MS.gene005995:CDS 40.0%
CATCCTCTTGCGATAATGAA+AGG - chr1.3:66555430-66555449 MS.gene005995:intron 40.0%
CCAAGCTTGACAAATTTCTC+TGG + chr1.3:66554827-66554846 None:intergenic 40.0%
CCAGAGAAATTTGTCAAGCT+TGG - chr1.3:66554824-66554843 MS.gene005995:intron 40.0%
CTTGGAATTGATCCTCCAAA+GGG - chr1.3:66554842-66554861 MS.gene005995:intron 40.0%
CTTTCATTATCGCAAGAGGA+TGG + chr1.3:66555432-66555451 None:intergenic 40.0%
GAACAATCAAGCTAGCAATG+AGG - chr1.3:66553079-66553098 MS.gene005995:CDS 40.0%
GAACAATCTAGCTAATACCG+AGG - chr1.3:66552960-66552979 MS.gene005995:intron 40.0%
GAACAGAAATTGGGAAACGT+AGG + chr1.3:66552269-66552288 None:intergenic 40.0%
GACTTGCACAACTTAGTTGA+GGG - chr1.3:66552841-66552860 MS.gene005995:intron 40.0%
GAGAACCATGAACTGTGAAA+GGG - chr1.3:66555699-66555718 MS.gene005995:intron 40.0%
GATATCCCTTTCACAGTTCA+TGG + chr1.3:66555707-66555726 None:intergenic 40.0%
GCTATATGGTCATCAACACA+GGG + chr1.3:66555544-66555563 None:intergenic 40.0%
TATCAGAAACAAGATCCCAC+TGG + chr1.3:66554036-66554055 None:intergenic 40.0%
TCTCTGTTACAGTCTTCCTT+CGG + chr1.3:66556014-66556033 None:intergenic 40.0%
TGATAAGCAAATGATGCAGG+AGG - chr1.3:66554051-66554070 MS.gene005995:CDS 40.0%
TGTTCTTACCAGTGGAGTTT+GGG + chr1.3:66555756-66555775 None:intergenic 40.0%
TTGCCTTTCATTATCGCAAG+AGG + chr1.3:66555436-66555455 None:intergenic 40.0%
TTGGCGTGCTACATTAATGA+TGG + chr1.3:66555382-66555401 None:intergenic 40.0%
! AGGAACTGGCAAAACACTTT+TGG - chr1.3:66554886-66554905 MS.gene005995:intron 40.0%
! GATTATAGCTTAATGGGCCT+AGG + chr1.3:66552705-66552724 None:intergenic 40.0%
! GATTTGTTCCACTTTACGCA+GGG - chr1.3:66553550-66553569 MS.gene005995:CDS 40.0%
! GTTGTAAAGCATTTGGAAGG+GGG - chr1.3:66552805-66552824 MS.gene005995:intron 40.0%
! TCAGAAATATGTTGGTGAGG+GGG - chr1.3:66554970-66554989 MS.gene005995:intron 40.0%
! TCTCTCTAGGAGCTGATATA+AGG - chr1.3:66555950-66555969 MS.gene005995:intron 40.0%
! TGACTTGCACAACTTAGTTG+AGG - chr1.3:66552840-66552859 MS.gene005995:intron 40.0%
! TTCGTTTAAGGTAGGGTTTC+TGG - chr1.3:66552388-66552407 MS.gene005995:intron 40.0%
!! AACTTGTTACCTCGTGTAGA+TGG - chr1.3:66555087-66555106 MS.gene005995:intron 40.0%
!! AAGTTTTGATGGCAACGAAC+AGG - chr1.3:66555266-66555285 MS.gene005995:intron 40.0%
!! GTTGATGACCATATAGCTCA+TGG - chr1.3:66555547-66555566 MS.gene005995:intron 40.0%
!! TGATTTGTTCCACTTTACGC+AGG - chr1.3:66553549-66553568 MS.gene005995:CDS 40.0%
!! TTTCAGTTTGTTGTTGGGCT+AGG - chr1.3:66554405-66554424 MS.gene005995:intron 40.0%
!!! AAAAGTGTTTTGCCAGTTCC+TGG + chr1.3:66554887-66554906 None:intergenic 40.0%
!!! AATGCACGCCTTTTTTGAAC+GGG + chr1.3:66555113-66555132 None:intergenic 40.0%
!!! CAATGCACGCCTTTTTTGAA+CGG + chr1.3:66555114-66555133 None:intergenic 40.0%
AACTTTGTGCATCCGCATCA+CGG + chr1.3:66552508-66552527 None:intergenic 45.0%
AATCCGCGTTTCGAAGATGT+TGG - chr1.3:66552721-66552740 MS.gene005995:intron 45.0%
ACAGTCGTGTATATCAGTCC+AGG - chr1.3:66553208-66553227 MS.gene005995:intron 45.0%
ACCTATTCAGTGCTCCTACA+AGG - chr1.3:66552581-66552600 MS.gene005995:CDS 45.0%
ACGCATTCCTTCCTCTATGT+CGG + chr1.3:66554448-66554467 None:intergenic 45.0%
AGATAGGATCTACCTGTGCA+AGG - chr1.3:66552921-66552940 MS.gene005995:intron 45.0%
AGCAACTAAGAAGCCTAGCA+AGG + chr1.3:66553446-66553465 None:intergenic 45.0%
AGCGATATCATCCTCATCGA+GGG + chr1.3:66552206-66552225 None:intergenic 45.0%
AGTTCTATTAGCAACAGCCC+TGG + chr1.3:66554912-66554931 None:intergenic 45.0%
ATAGAGGAAGGAATGCGTGT+TGG - chr1.3:66554450-66554469 MS.gene005995:intron 45.0%
ATAGCCTCGCAATCTATACC+TGG + chr1.3:66553229-66553248 None:intergenic 45.0%
ATTCCTTCCTCTATGTCGGT+GGG + chr1.3:66554444-66554463 None:intergenic 45.0%
CAACCAACATCTTCGAAACG+CGG + chr1.3:66552727-66552746 None:intergenic 45.0%
CCATAACAAAGCACACCCTT+TGG + chr1.3:66554860-66554879 None:intergenic 45.0%
CGAGAACCATGAACTGTGAA+AGG - chr1.3:66555698-66555717 MS.gene005995:intron 45.0%
CTCTGTTACAGTCTTCCTTC+GGG + chr1.3:66556013-66556032 None:intergenic 45.0%
CTTTGGATCCAGCACTATTG+CGG - chr1.3:66555599-66555618 MS.gene005995:intron 45.0%
GATGGTTCGTGAACTGTTTC+AGG - chr1.3:66554997-66555016 MS.gene005995:intron 45.0%
GATTCCTGACTTTCCTTGCT+AGG - chr1.3:66553430-66553449 MS.gene005995:CDS 45.0%
GCTTGGAATTGATCCTCCAA+AGG - chr1.3:66554841-66554860 MS.gene005995:intron 45.0%
GGTATCAAGGAGTCTGATAC+TGG - chr1.3:66553995-66554014 MS.gene005995:intron 45.0%
GTACAATCAAGCTAGTGCTG+AGG - chr1.3:66553020-66553039 MS.gene005995:CDS 45.0%
GTAGATGGCCCGTTCAAAAA+AGG - chr1.3:66555102-66555121 MS.gene005995:intron 45.0%
GTATAGATTGCGAGGCTATG+TGG - chr1.3:66553230-66553249 MS.gene005995:intron 45.0%
TAACAAAGCACACCCTTTGG+AGG + chr1.3:66554857-66554876 None:intergenic 45.0%
TAACCAAAGAGAGGCCCATT+AGG + chr1.3:66552682-66552701 None:intergenic 45.0%
TAGAGGAAGGAATGCGTGTT+GGG - chr1.3:66554451-66554470 MS.gene005995:intron 45.0%
TATTCAGTGCTCCTACAAGG+AGG - chr1.3:66552584-66552603 MS.gene005995:CDS 45.0%
TGATGTGGTTGAGTCGTTCT+AGG - chr1.3:66552870-66552889 MS.gene005995:intron 45.0%
TGCAAAGATTCCTCAAAGCC+AGG + chr1.3:66555874-66555893 None:intergenic 45.0%
TGTGTCCTACTCTCTAGATC+AGG + chr1.3:66555661-66555680 None:intergenic 45.0%
TTCCACTTTACGCAGGGTTT+GGG - chr1.3:66553556-66553575 MS.gene005995:CDS 45.0%
TTGCTAGGCTTCTTAGTTGC+TGG - chr1.3:66553445-66553464 MS.gene005995:CDS 45.0%
! AATCAAGCTAGTGCTGAGGT+AGG - chr1.3:66553024-66553043 MS.gene005995:CDS 45.0%
! AGTCAAGCTAGTGCTGAGAT+AGG - chr1.3:66552905-66552924 MS.gene005995:intron 45.0%
! CCAAAGGGTGTGCTTTGTTA+TGG - chr1.3:66554857-66554876 MS.gene005995:intron 45.0%
! TGGCAAAACACTTTTGGCCA+GGG - chr1.3:66554892-66554911 MS.gene005995:intron 45.0%
! TTTGATGGCAACGAACAGGT+TGG - chr1.3:66555270-66555289 MS.gene005995:intron 45.0%
!! CAAAACTTGTCCTGGCTTTG+AGG - chr1.3:66555861-66555880 MS.gene005995:intron 45.0%
!! GGATCAATTTTTGGAGGCAG+AGG + chr1.3:66554613-66554632 None:intergenic 45.0%
!! TCCGTTTTGAGCTTCTTGCT+CGG - chr1.3:66555725-66555744 MS.gene005995:intron 45.0%
!! TCCTTGTAGGAGCACTGAAT+AGG + chr1.3:66552585-66552604 None:intergenic 45.0%
!! TGGTGTTGGTGGTGATAATG+AGG - chr1.3:66555180-66555199 MS.gene005995:intron 45.0%
!! TTGTGCAAGTCAGCTTGTTG+TGG + chr1.3:66552832-66552851 None:intergenic 45.0%
!! TTTTTGGAGGCAGAGGAATC+TGG + chr1.3:66554606-66554625 None:intergenic 45.0%
ACTTTACGATCCAATCGCCC+AGG + chr1.3:66555625-66555644 None:intergenic 50.0%
AGAGGCCCATTAGGTCTAGA+AGG + chr1.3:66552673-66552692 None:intergenic 50.0%
CAGTCCAGGTATAGATTGCG+AGG - chr1.3:66553222-66553241 MS.gene005995:intron 50.0%
CATTCCTTCCTCTATGTCGG+TGG + chr1.3:66554445-66554464 None:intergenic 50.0%
CGATATCATCCTCATCGAGG+GGG + chr1.3:66552204-66552223 None:intergenic 50.0%
CTAATACCGAGGTAAGGACC+TGG - chr1.3:66552971-66552990 MS.gene005995:intron 50.0%
GAAGCCTAGCAAGGAAAGTC+AGG + chr1.3:66553437-66553456 None:intergenic 50.0%
GAGCGATATCATCCTCATCG+AGG + chr1.3:66552207-66552226 None:intergenic 50.0%
GCACGATTTGACGATGGTGT+TGG - chr1.3:66555166-66555185 MS.gene005995:intron 50.0%
GCCGAGCAAGAAGCTCAAAA+CGG + chr1.3:66555729-66555748 None:intergenic 50.0%
GCGATATCATCCTCATCGAG+GGG + chr1.3:66552205-66552224 None:intergenic 50.0%
GGTTGTTTGTACAGGACACG+TGG - chr1.3:66552742-66552761 MS.gene005995:intron 50.0%
GTTCCACTTTACGCAGGGTT+TGG - chr1.3:66553555-66553574 MS.gene005995:CDS 50.0%
TCCTACTCTCTAGATCAGGC+AGG + chr1.3:66555657-66555676 None:intergenic 50.0%
TCTACCTGTGCAAGGTGAGT+TGG - chr1.3:66552929-66552948 MS.gene005995:intron 50.0%
TCTAGCTACACCAAGCCAGT+GGG - chr1.3:66554018-66554037 MS.gene005995:CDS 50.0%
TGGGAGTTGCACTGAACTTC+TGG + chr1.3:66556077-66556096 None:intergenic 50.0%
TGTTATGGTCCACCAGGAAC+TGG - chr1.3:66554872-66554891 MS.gene005995:intron 50.0%
TTACAGTCTTCCTTCGGGCA+CGG + chr1.3:66556008-66556027 None:intergenic 50.0%
TTCCTTCCTCTATGTCGGTG+GGG + chr1.3:66554443-66554462 None:intergenic 50.0%
TTCTTGGAGCTCCTCCTTGT+AGG + chr1.3:66552598-66552617 None:intergenic 50.0%
! AAGTTAGTGCAGTGCTGAGC+GGG - chr1.3:66553146-66553165 MS.gene005995:intron 50.0%
! AATATGTTGGTGAGGGGGCT+CGG - chr1.3:66554975-66554994 MS.gene005995:intron 50.0%
! AGACCTAATGGGCCTCTCTT+TGG - chr1.3:66552676-66552695 MS.gene005995:intron 50.0%
! AGTGCTGGATCCAAAGTGTC+AGG + chr1.3:66555595-66555614 None:intergenic 50.0%
! AGTGTTTTGCCAGTTCCTGG+TGG + chr1.3:66554884-66554903 None:intergenic 50.0%
! CAAGTTAGTGCAGTGCTGAG+CGG - chr1.3:66553145-66553164 MS.gene005995:CDS 50.0%
! CGATTTGACGATGGTGTTGG+TGG - chr1.3:66555169-66555188 MS.gene005995:intron 50.0%
! CTGGCAAAACACTTTTGGCC+AGG - chr1.3:66554891-66554910 MS.gene005995:intron 50.0%
! GAAACAAGATCCCACTGGCT+TGG + chr1.3:66554031-66554050 None:intergenic 50.0%
! GTGCTTTGTTATGGTCCACC+AGG - chr1.3:66554866-66554885 MS.gene005995:intron 50.0%
! TGTTGTTGGGCTAGGAGACA+AGG - chr1.3:66554413-66554432 MS.gene005995:intron 50.0%
!! CTTGATGGGTTTGATGCTCG+AGG - chr1.3:66555235-66555254 MS.gene005995:intron 50.0%
AGTTGAGGGCGAGCTTGATG+TGG - chr1.3:66552855-66552874 MS.gene005995:intron 55.0%
ATCCAGCACTATTGCGGCCT+GGG - chr1.3:66555605-66555624 MS.gene005995:intron 55.0%
CAATGAGGTAGGACCTGACC+GGG - chr1.3:66553094-66553113 MS.gene005995:CDS 55.0%
GCAATGAGGTAGGACCTGAC+CGG - chr1.3:66553093-66553112 MS.gene005995:CDS 55.0%
GCCTGCCTGATCTAGAGAGT+AGG - chr1.3:66555653-66555672 MS.gene005995:intron 55.0%
GGGCCTAGGTAACCAAAGAG+AGG + chr1.3:66552691-66552710 None:intergenic 55.0%
GGGCCTCTCTTTGGTTACCT+AGG - chr1.3:66552685-66552704 MS.gene005995:intron 55.0%
GTCCCAAACCCTGCGTAAAG+TGG + chr1.3:66553561-66553580 None:intergenic 55.0%
GTCTAGCTACACCAAGCCAG+TGG - chr1.3:66554017-66554036 MS.gene005995:CDS 55.0%
TCCTTCCTCTATGTCGGTGG+GGG + chr1.3:66554442-66554461 None:intergenic 55.0%
TGCTGAGGTAGGATGTGGCT+GGG - chr1.3:66553035-66553054 MS.gene005995:CDS 55.0%
TGTATGCTATCCGTGCCCGA+AGG - chr1.3:66555995-66556014 MS.gene005995:intron 55.0%
TTGAACGGGCCATCTACACG+AGG + chr1.3:66555099-66555118 None:intergenic 55.0%
! AGGAGTGTGTGCACTGAAGC+TGG - chr1.3:66555970-66555989 MS.gene005995:intron 55.0%
! AGTTAGTGCAGTGCTGAGCG+GGG - chr1.3:66553147-66553166 MS.gene005995:intron 55.0%
! GCTAGTGCTGAGGTAGGATG+TGG - chr1.3:66553030-66553049 MS.gene005995:CDS 55.0%
! GGAGGTGCACGATTTGACGA+TGG - chr1.3:66555160-66555179 MS.gene005995:intron 55.0%
ACCCAGCCAGGTCCTTACCT+CGG + chr1.3:66552980-66552999 None:intergenic 60.0%
ACCGAGGTAAGGACCTGGCT+GGG - chr1.3:66552976-66552995 MS.gene005995:intron 60.0%
ACTATTGCGGCCTGGGCGAT+TGG - chr1.3:66555612-66555631 MS.gene005995:intron 60.0%
CGGCTTTGCCCAAACTCCAC+TGG - chr1.3:66555745-66555764 MS.gene005995:intron 60.0%
CGTGCCAACTCACCTTGCAC+AGG + chr1.3:66552936-66552955 None:intergenic 60.0%
CTAACTCACCTCACCCAGCC+AGG + chr1.3:66552992-66553011 None:intergenic 60.0%
GATCCAGCACTATTGCGGCC+TGG - chr1.3:66555604-66555623 MS.gene005995:intron 60.0%
GGTTTCCCCCACCGACATAG+AGG - chr1.3:66554434-66554453 MS.gene005995:intron 60.0%
GTGCTGAGGTAGGATGTGGC+TGG - chr1.3:66553034-66553053 MS.gene005995:CDS 60.0%
TACCGAGGTAAGGACCTGGC+TGG - chr1.3:66552975-66552994 MS.gene005995:intron 60.0%
TCCCCCACCGACATAGAGGA+AGG - chr1.3:66554438-66554457 MS.gene005995:intron 60.0%
! GTTAGTGCAGTGCTGAGCGG+GGG - chr1.3:66553148-66553167 MS.gene005995:intron 60.0%
CATCCTCATCGAGGGGGCGA+GGG + chr1.3:66552198-66552217 None:intergenic 65.0%
GCAGGAGGAGCAGCCTCTTC+AGG - chr1.3:66554066-66554085 MS.gene005995:CDS 65.0%
GGTAAGGACCTGGCTGGGTG+AGG - chr1.3:66552981-66553000 MS.gene005995:intron 65.0%
TCATCCTCATCGAGGGGGCG+AGG + chr1.3:66552199-66552218 None:intergenic 65.0%
TCATGCCAGCTCTCCTCGCC+CGG + chr1.3:66553115-66553134 None:intergenic 65.0%
! TGTTGGTGAGGGGGCTCGGA+TGG - chr1.3:66554979-66554998 MS.gene005995:intron 65.0%
AGGTAGGACCTGACCGGGCG+AGG - chr1.3:66553099-66553118 MS.gene005995:CDS 70.0%
CGCCCAGGCCGCAATAGTGC+TGG + chr1.3:66555610-66555629 None:intergenic 70.0%
GAACCCTCGCCCCCTCGATG+AGG - chr1.3:66552192-66552211 MS.gene005995:CDS 70.0%
CCAGCTCTCCTCGCCCGGTC+AGG + chr1.3:66553110-66553129 None:intergenic 75.0%
CCTGACCGGGCGAGGAGAGC+TGG - chr1.3:66553107-66553126 MS.gene005995:CDS 75.0%
! GTGCAGTGCTGAGCGGGGGC+TGG - chr1.3:66553152-66553171 MS.gene005995:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 66552154 66556116 66552154 ID=MS.gene005995
chr1.3 mRNA 66552154 66556116 66552154 ID=MS.gene005995.t1;Parent=MS.gene005995
chr1.3 exon 66556030 66556116 66556030 ID=MS.gene005995.t1.exon1;Parent=MS.gene005995.t1
chr1.3 CDS 66556030 66556116 66556030 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66554618 66554699 66554618 ID=MS.gene005995.t1.exon2;Parent=MS.gene005995.t1
chr1.3 CDS 66554618 66554699 66554618 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66554183 66554274 66554183 ID=MS.gene005995.t1.exon3;Parent=MS.gene005995.t1
chr1.3 CDS 66554183 66554274 66554183 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66554015 66554092 66554015 ID=MS.gene005995.t1.exon4;Parent=MS.gene005995.t1
chr1.3 CDS 66554015 66554092 66554015 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66553798 66553859 66553798 ID=MS.gene005995.t1.exon5;Parent=MS.gene005995.t1
chr1.3 CDS 66553798 66553859 66553798 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66553547 66553691 66553547 ID=MS.gene005995.t1.exon6;Parent=MS.gene005995.t1
chr1.3 CDS 66553547 66553691 66553547 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66553252 66553470 66553252 ID=MS.gene005995.t1.exon7;Parent=MS.gene005995.t1
chr1.3 CDS 66553252 66553470 66553252 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66552983 66553164 66552983 ID=MS.gene005995.t1.exon8;Parent=MS.gene005995.t1
chr1.3 CDS 66552983 66553164 66552983 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66552504 66552679 66552504 ID=MS.gene005995.t1.exon9;Parent=MS.gene005995.t1
chr1.3 CDS 66552504 66552679 66552504 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
chr1.3 exon 66552154 66552311 66552154 ID=MS.gene005995.t1.exon10;Parent=MS.gene005995.t1
chr1.3 CDS 66552154 66552311 66552154 ID=cds.MS.gene005995.t1;Parent=MS.gene005995.t1
Gene Sequence

>MS.gene005995

ATGTCTAATGAACACGAAGACGATCTCAAAGACGAGAAGAACCCTCGCCCCCTCGATGAGGATGATATCGCTCTCCTCAAAACCTATGTATGTCTCTTTCTCTCTCTAAAACCCTACGTTTCCCAATTTCTGTTCTATTTCAATTCAATTGTGGATTTTTTTTTTGGGAATTTTCCTGATTCTGTTAATTAAAGTTGTTACTTTTTGTAAATTTTGCAACTCGAATTAATGAAATTCGTTTAAGGTAGGGTTTCTGGATGTTAAGAGTTAAAGTTGTTGGGTTGGGTTTGTGTAAATTGATGCTTGTGGTAGCTGTGTGAGTGTGAAATATACATGTTAATTGTTAATATACCGTGATGCGGATGCACAAAGTTTGTAATTTCATATAGGAATTGTTCACTTATGTAAAAACAAGTTACAACATGTGACCTATTCAGTGCTCCTACAAGGAGGAGCTCCAAGAATACTCTAAGATAAATATACACTATTTTAGCTAGAAGTGCCTCCTTTTATAGTCCTTCTAGACCTAATGGGCCTCTCTTTGGTTACCTAGGCCCATTAAGCTATAATCCGCGTTTCGAAGATGTTGGTTGTTTGTACAGGACACGTGGAGTCAGTGAACACGTAACTTACATAACTACGCCGCAGAATGTTGTAAAGCATTTGGAAGGGGGACCACAACAAGCTGACTTGCACAACTTAGTTGAGGGCGAGCTTGATGTGGTTGAGTCGTTCTAGGCATGACTTGAACAGTCAAGCTAGTGCTGAGATAGGATCTACCTGTGCAAGGTGAGTTGGCACGACTTGAACAATCTAGCTAATACCGAGGTAAGGACCTGGCTGGGTGAGGTGAGTTAGTATGACTTGTACAATCAAGCTAGTGCTGAGGTAGGATGTGGCTGGGAGAGCTGAGCTAGTATGACTTGAACAATCAAGCTAGCAATGAGGTAGGACCTGACCGGGCGAGGAGAGCTGGCATGACTTGAACAATCAAGTTAGTGCAGTGCTGAGCGGGGGCTGGATAGTCAACATGAAATATTAAGAGACATGTGGTACAGTCGTGTATATCAGTCCAGGTATAGATTGCGAGGCTATGTGGTAAAGCTGTAACCTTTAATTACTAAGTGTACCCAATGAATAGGTTTCATTAAGAGTTAACGAGGTGCTACTAATGTGTGTAACTATGTATTTAGTGGTGACGATGTGATTGCAAAGTCTATTTAATCTGTTCTACAGAAAGCAAGTGATGTTTATGGAGATGTTTTGCTCATTTGTTGATTCCTGACTTTCCTTGCTAGGCTTCTTAGTTGCTGGACTGAATGCTTTTTCTATGATCAATGGTTTTCTGATTATTAGCGCATTTAAATTTGAATAGTCTTTTATGAAATGTTTTGTTGATTTGTTCCACTTTACGCAGGGTTTGGGACCTTATTCCACAAGTATTAAAAAAGTGGAGAAGGAAATTAAAGATATGGCAAAGAAAGTGAATGACTTGTGTGGTATGTGATTAATATTTAGTTTTTTTTTATTTTCTTGTTTGCTATGTAGATGGTTGAAACTGTTTAACTAAAGAAAATTACATCTTTTATTTTCTCTCGGTATTGTGGTTTATTCTATGCCCCTTTGCTGTCTATTTTCATTTTTATGGTTGTAAGTGATCCCTTAATTGGGTATATTTCTCTCTCCAAATTTATTCTTAAACTGAAGGAACAACTAGATAATTGGATATTATGTAGGTGTTTTATTTCGTCCCATTCATAGTAGTTTGTCTTAGTTGCTTGAGTTGGATGCTGTTATCACTTGCACGCTTCGTTAGATGTTAACTTCCTGTTGTAATAATAGGTATCAAGGAGTCTGATACTGGTCTAGCTACACCAAGCCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAGCCTCTTCAGGTGATTTTTTTTCTTTCTCATCCTGTAGAATTTTTTCAAAGTGCTTTTATTATTTATAGGAATGCCTAAATATGGTCATTTATTGAACAGGTTGCAAGATGCACGAAAATTATAAATCCAAACTCTGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCAAAGGTGCCTATGCGTCACATCAATCTTTTCATTTATACTTAATTAATCTATTATATAGATATTTGTTTATCACTCGTTTATATGCTGTTTAATATGACAAGGATTTACAAAAAAAAATTACGCTCGGTCTAATATTCCTGCTGCTTTGATGATTTCAGTTTGTTGTTGGGCTAGGAGACAAGGTTTCCCCCACCGACATAGAGGAAGGAATGCGTGTTGGGTATGTGTCCAAAAAATAACTCTTATGATAATATATCACCCAAAGAAAGAAGAGTAACAACATTATTACCTTGTCTTCGTGTTTGACCTTTATTTCATCATCGCAGTGTTGATAGAACCAAATATCAGATCCAGATTCCTCTGCCTCCAAAAATTGATCCAAGTGTTACCATGATGACAGTTGAAGAGAAACCAGATGTGACATATAATGATGTTGGTGGTTGTAAGGAACAGATTGAAAAGATGCGTGAAGTAAGTTTTTGAAATTTTCCATATTTCACATAACAACGGAAATGAATTGGCACTGAATTTTTAATTTCTCTGCAAGGTTGTTGAACTTCCCATGCTTCATCCAGAGAAATTTGTCAAGCTTGGAATTGATCCTCCAAAGGGTGTGCTTTGTTATGGTCCACCAGGAACTGGCAAAACACTTTTGGCCAGGGCTGTTGCTAATAGAACTGATGCTTGTTTTATAAGGGTCATTGGAAGTGAACTTGTTCAGAAATATGTTGGTGAGGGGGCTCGGATGGTTCGTGAACTGTTTCAGGTAAATGTTTCCTGTTTTATATAGCTTTGTTTTTATCATTGTTTCCATCATCTGGTATCATTTGAGTGAACTTGTTACCTCGTGTAGATGGCCCGTTCAAAAAAGGCGTGCATTGTGTTTTTTGATGAAATTGATGCAATTGGAGGTGCACGATTTGACGATGGTGTTGGTGGTGATAATGAGGTTCAGCGAACTATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCTCGAGGAAACATCAAAGTTTTGATGGCAACGAACAGGTTGGTTATTACTATTATTTGGTTTTCCCTTTGTTCTCTATTTTACTGTAGATGTTATGAAAGCATCTCTCTTTGTATTCATTCATATTTTCCATCATTAATGTAGCACGCCAAATGCTCTTTTTTTCTCATAATGTCTGTCCATCCTCTTGCGATAATGAAAGGCAAAATCAAGGTTGCATTGCTAGTTTGCAACTTCATTTTTAGATGTTTCGTTGCTTCATGAGTCATTTTCTTCAATTTGAAAGTTTTACCCTGTGTTGATGACCATATAGCTCATGGCTTTTTGTCCACAAATTTTAGGCCTGACACTTTGGATCCAGCACTATTGCGGCCTGGGCGATTGGATCGTAAAGTTGAATTTGGCCTGCCTGATCTAGAGAGTAGGACACAAATATTCAAGATACACACGAGAACCATGAACTGTGAAAGGGATATCCGTTTTGAGCTTCTTGCTCGGCTTTGCCCAAACTCCACTGGTAAGAACATAACAACTGGGCAATTTTTAATTTAGCTTATACTTCCTGACCATCTTTTAAGTACTTCAGTATTCTGGCTTATGTCCTTTCTAGTCAAAACTTGTCCTGGCTTTGAGGAATCTTTGCAACTTGCTTTCGTTGTCATGAAAAATTAGTGTCCTTTCTGACCAATATACTTTTTGTTCTCTCTAGGAGCTGATATAAGGAGTGTGTGCACTGAAGCTGGTATGTATGCTATCCGTGCCCGAAGGAAGACTGTAACAGAGAAAGACTTCCTTGATGCAGTGAATAAAGTCATCAAAGGGTACCAGAAGTTCAGTGCAACTCCCAAATATATGGTCTACAATTGA
Protein sequence

>MS.gene005995.t1

MSNEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKDMAKKVNDLCGIKESDTGLATPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEIDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN