AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034005

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034005.t1 MTR_4g011790 96.382 608 11 2 1 597 1 608 0.0 1206
MS.gene034005.t1 MTR_4g011790 96.358 604 10 2 1 597 1 599 0.0 1122
MS.gene034005.t1 MTR_4g011790 96.115 592 11 2 1 585 1 587 0.0 1096
MS.gene034005.t1 MTR_4g013210 81.294 572 96 4 1 566 1 567 0.0 914
MS.gene034005.t1 MTR_4g013210 74.959 603 99 4 1 597 1 557 0.0 869
MS.gene034005.t1 MTR_4g013210 84.701 451 60 2 151 597 1 446 0.0 791
MS.gene034005.t1 MTR_4g013210 74.755 511 81 3 1 509 1 465 0.0 728
MS.gene034005.t1 MTR_4g013210 81.579 456 77 3 1 454 1 451 0.0 724
MS.gene034005.t1 MTR_4g013210 76.275 451 57 2 151 597 1 405 0.0 692
MS.gene034005.t1 MTR_3g035130 29.114 553 339 19 48 593 1 507 1.46e-52 188
MS.gene034005.t1 MTR_3g035130 29.495 495 306 17 48 535 1 459 5.61e-44 163
MS.gene034005.t1 MTR_4g077900 28.140 430 258 15 183 596 83 477 2.31e-38 148
MS.gene034005.t1 MTR_4g057730 26.276 529 336 16 74 589 47 534 1.18e-36 144
MS.gene034005.t1 MTR_1g026310 27.296 392 244 12 215 596 199 559 1.88e-36 144
MS.gene034005.t1 MTR_5g027480 25.331 529 342 15 80 596 67 554 3.41e-36 143
MS.gene034005.t1 MTR_2g030240 26.046 526 321 15 108 596 52 546 5.38e-36 142
MS.gene034005.t1 MTR_2g030240 27.751 418 237 13 213 596 66 452 1.54e-35 139
MS.gene034005.t1 MTR_5g027500 27.612 402 253 12 204 596 195 567 2.83e-35 140
MS.gene034005.t1 MTR_0803s0020 25.498 502 308 15 108 589 285 740 4.20e-34 139
MS.gene034005.t1 MTR_8g039720 26.263 396 246 12 211 596 199 558 4.42e-34 137
MS.gene034005.t1 MTR_1g063110 27.226 393 240 12 210 589 181 540 7.14e-33 133
MS.gene034005.t1 MTR_2g105570 24.624 532 336 17 81 590 54 542 3.14e-32 131
MS.gene034005.t1 MTR_3g088880 25.708 424 281 11 172 589 153 548 8.86e-32 130
MS.gene034005.t1 MTR_1g063120 27.047 403 241 13 207 589 175 544 9.24e-32 130
MS.gene034005.t1 MTR_1569s0010 24.051 553 347 15 73 590 14 528 9.72e-31 126
MS.gene034005.t1 MTR_1g073180 28.684 380 234 12 215 589 179 526 9.77e-31 127
MS.gene034005.t1 MTR_4g128337 24.762 525 340 15 79 589 57 540 2.18e-30 125
MS.gene034005.t1 MTR_5g007640 24.774 553 336 17 65 590 81 580 1.51e-29 124
MS.gene034005.t1 MTR_1g104810 27.697 343 187 6 219 520 191 513 6.69e-29 122
MS.gene034005.t1 MTR_1g104810 27.697 343 187 6 219 520 258 580 7.29e-29 122
MS.gene034005.t1 MTR_4g005750 23.819 529 338 18 81 590 53 535 2.15e-28 119
MS.gene034005.t1 MTR_2g095510 24.870 386 253 10 210 589 177 531 9.24e-28 117
MS.gene034005.t1 MTR_3g064420 26.952 397 246 11 210 590 179 547 1.41e-27 117
MS.gene034005.t1 MTR_5g076220 27.335 439 244 17 182 592 153 544 2.17e-27 117
MS.gene034005.t1 MTR_3g088870 25.059 427 283 12 172 589 152 550 2.91e-27 116
MS.gene034005.t1 MTR_5g076200 26.244 442 245 12 182 592 153 544 8.03e-27 115
MS.gene034005.t1 MTR_7g084850 27.411 394 237 19 218 592 356 719 9.74e-26 112
MS.gene034005.t1 MTR_5g076240 27.317 410 241 15 201 592 173 543 1.14e-25 111
MS.gene034005.t1 MTR_4g057730 25.708 459 293 15 74 519 47 470 1.25e-25 110
MS.gene034005.t1 MTR_0161s0050 26.382 398 227 13 220 592 190 546 4.48e-25 110
MS.gene034005.t1 MTR_2g044180 27.696 408 244 13 200 590 179 552 7.58e-25 109
MS.gene034005.t1 MTR_2g044180 28.010 382 228 12 226 590 110 461 7.96e-25 108
MS.gene034005.t1 MTR_1g073180 28.371 356 218 12 215 565 201 524 9.32e-25 108
MS.gene034005.t1 MTR_1g090737 25.648 386 232 11 220 589 212 558 1.48e-24 108
MS.gene034005.t1 MTR_3g460770 25.606 371 245 12 226 591 191 535 7.46e-23 103
MS.gene034005.t1 MTR_4g121600 26.823 384 230 15 226 590 201 552 3.38e-22 101
MS.gene034005.t1 MTR_8g035620 24.172 513 318 18 111 589 146 621 7.30e-22 101
MS.gene034005.t1 MTR_5g008800 26.667 390 231 13 220 591 182 534 1.04e-21 99.4
MS.gene034005.t1 MTR_8g074040 24.808 391 245 12 216 591 222 578 1.65e-21 99.0
MS.gene034005.t1 MTR_4g057730 25.792 442 280 15 74 502 47 453 1.71e-21 98.2
MS.gene034005.t1 MTR_8g074040 24.808 391 245 12 216 591 104 460 1.74e-21 98.6
MS.gene034005.t1 MTR_8g074120 25.122 410 244 13 202 591 123 489 2.35e-21 98.2
MS.gene034005.t1 MTR_5g009350 24.665 523 306 18 82 544 80 574 5.42e-21 97.4
MS.gene034005.t1 MTR_1g034360 23.327 493 288 15 108 539 103 566 8.69e-20 94.0
MS.gene034005.t1 MTR_1g030290 23.358 548 318 16 82 564 109 619 2.07e-19 92.8
MS.gene034005.t1 MTR_5g009350 24.449 499 290 17 82 520 80 551 1.12e-18 90.5
MS.gene034005.t1 MTR_1g086600 24.063 507 317 17 82 538 100 588 1.21e-18 90.5
MS.gene034005.t1 MTR_5g009350 24.449 499 290 17 82 520 80 551 1.25e-18 90.1
MS.gene034005.t1 MTR_5g008820 24.810 395 228 13 220 590 182 531 2.60e-18 89.0
MS.gene034005.t1 MTR_1054s0020 25.546 458 272 14 154 591 358 766 6.86e-18 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034005.t1 AT3G16170 65.404 581 167 6 36 597 43 608 0.0 763
MS.gene034005.t1 AT3G48990 28.454 485 306 13 108 587 56 504 1.36e-51 186
MS.gene034005.t1 AT1G30520 29.440 411 229 13 217 595 170 551 2.42e-40 155
MS.gene034005.t1 AT1G30520 29.440 411 229 13 217 595 170 551 2.42e-40 155
MS.gene034005.t1 AT1G20510 28.061 392 229 12 219 595 189 542 6.23e-40 154
MS.gene034005.t1 AT4G19010 27.649 387 236 12 219 593 204 558 5.78e-39 151
MS.gene034005.t1 AT1G20480 28.497 386 234 12 219 596 213 564 2.73e-37 146
MS.gene034005.t1 AT1G20500 26.943 386 245 11 217 596 195 549 2.92e-33 134
MS.gene034005.t1 AT5G63380 26.196 397 251 11 205 592 190 553 4.89e-33 134
MS.gene034005.t1 AT5G38120 27.320 388 235 10 219 596 199 549 7.41e-32 130
MS.gene034005.t1 AT3G21240 26.190 420 256 15 186 590 167 547 4.37e-31 128
MS.gene034005.t1 AT1G65060 24.528 530 336 16 79 590 74 557 4.94e-31 128
MS.gene034005.t1 AT4G05160 25.320 391 252 9 214 596 185 543 7.15e-30 124
MS.gene034005.t1 AT1G21530 25.750 400 228 9 221 592 186 544 1.87e-29 123
MS.gene034005.t1 AT1G20510 28.481 316 179 11 219 519 189 472 1.94e-29 122
MS.gene034005.t1 AT1G21530 26.799 403 218 11 221 592 186 542 9.51e-29 120
MS.gene034005.t1 AT1G21540 25.424 413 247 10 206 595 174 548 4.54e-28 119
MS.gene034005.t1 AT1G77240 25.352 426 242 14 197 595 167 543 5.17e-28 119
MS.gene034005.t1 AT5G38120 28.571 329 194 9 219 537 199 496 4.22e-27 115
MS.gene034005.t1 AT5G27600 28.280 343 185 6 219 520 261 583 4.43e-27 117
MS.gene034005.t1 AT5G36880 26.835 436 253 19 188 592 264 664 1.21e-26 115
MS.gene034005.t1 AT5G36880 26.835 436 253 19 188 592 264 664 1.21e-26 115
MS.gene034005.t1 AT5G36880 26.835 436 253 19 188 592 264 664 1.21e-26 115
MS.gene034005.t1 AT5G36880 26.835 436 253 19 188 592 264 664 1.21e-26 115
MS.gene034005.t1 AT5G36880 26.835 436 253 19 188 592 314 714 1.27e-26 115
MS.gene034005.t1 AT5G16340 29.455 404 211 16 217 592 183 540 6.07e-26 112
MS.gene034005.t1 AT1G51680 21.997 591 374 18 21 590 30 554 1.04e-25 112
MS.gene034005.t1 AT1G65880 25.935 401 242 11 216 592 183 552 1.18e-25 112
MS.gene034005.t1 AT3G05970 28.736 348 177 8 219 520 261 583 1.85e-25 112
MS.gene034005.t1 AT3G21230 24.808 391 240 12 217 590 208 561 7.59e-25 109
MS.gene034005.t1 AT1G75960 27.919 394 231 14 217 592 182 540 8.71e-25 108
MS.gene034005.t1 AT3G16910 23.374 569 343 16 64 590 38 555 9.05e-25 108
MS.gene034005.t1 AT1G65890 25.000 400 246 11 216 592 183 551 9.18e-25 109
MS.gene034005.t1 AT5G16370 28.087 413 235 16 200 592 170 540 1.89e-24 108
MS.gene034005.t1 AT1G20510 27.922 308 176 12 219 508 189 468 3.59e-24 106
MS.gene034005.t1 AT1G30520 29.043 303 162 10 217 495 170 443 4.44e-24 106
MS.gene034005.t1 AT1G30520 29.043 303 162 10 217 495 170 443 4.44e-24 106
MS.gene034005.t1 AT5G38120 28.296 311 182 9 219 519 199 478 7.72e-24 105
MS.gene034005.t1 AT5G38120 28.296 311 182 9 219 519 199 478 7.72e-24 105
MS.gene034005.t1 AT3G21240 26.857 350 208 13 186 520 167 483 3.70e-23 103
MS.gene034005.t1 AT3G21240 26.857 350 208 13 186 520 167 483 3.70e-23 103
MS.gene034005.t1 AT1G66120 25.897 390 240 11 220 592 187 544 4.22e-23 103
MS.gene034005.t1 AT5G36880 28.333 360 205 17 188 521 264 596 5.62e-23 103
MS.gene034005.t1 AT1G68270 25.385 390 237 11 212 592 177 521 5.68e-23 103
MS.gene034005.t1 AT2G17650 27.696 408 233 15 206 591 228 595 1.16e-21 99.8
MS.gene034005.t1 AT1G20560 27.506 389 227 14 220 590 110 461 1.18e-21 99.0
MS.gene034005.t1 AT1G20560 27.461 386 231 14 220 590 188 539 1.68e-21 99.0
MS.gene034005.t1 AT1G49430 24.949 493 282 14 108 539 104 569 2.03e-21 99.0
MS.gene034005.t1 AT1G65060 25.285 439 270 15 79 499 74 472 4.01e-21 97.4
MS.gene034005.t1 AT3G21230 26.269 335 199 11 217 534 208 511 5.36e-21 97.4
MS.gene034005.t1 AT1G51680 22.015 536 337 16 21 535 30 505 9.48e-21 96.7
MS.gene034005.t1 AT3G21230 26.480 321 188 11 217 520 208 497 2.43e-19 92.0
MS.gene034005.t1 AT1G62940 24.427 393 260 13 212 595 174 538 6.53e-19 90.9
MS.gene034005.t1 AT1G51680 21.881 521 326 16 21 520 30 490 1.43e-18 89.4
MS.gene034005.t1 AT4G23850 25.156 481 309 14 82 520 81 552 2.36e-18 89.4
MS.gene034005.t1 AT1G64400 23.214 504 298 17 99 540 93 569 6.32e-17 85.1
MS.gene034005.t1 AT5G35930 24.190 525 301 22 111 592 5 475 3.97e-14 76.3
MS.gene034005.t1 AT5G35930 24.190 525 301 22 111 592 97 567 5.17e-14 76.3
MS.gene034005.t1 AT1G20490 26.296 270 169 10 219 482 199 444 6.25e-14 74.7
MS.gene034005.t1 AT1G20490 26.296 270 169 10 219 482 199 444 6.25e-14 74.7
MS.gene034005.t1 AT1G77590 21.622 555 363 13 22 518 44 584 1.74e-12 70.9
MS.gene034005.t1 AT1G76290 23.454 388 250 13 220 592 178 533 1.88e-12 70.5
MS.gene034005.t1 AT4G14070 30.516 213 122 7 82 274 128 334 8.08e-12 68.9
MS.gene034005.t1 AT4G14070 26.291 213 141 4 363 564 471 678 3.11e-11 67.0

Find 142 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATCGTTTAAAGAATAT+TGG 0.225924 4.3:-85136341 MS.gene034005:CDS
AATGGTGGTGAGTGAATTTA+TGG 0.241092 4.3:+85141596 None:intergenic
CATCACTGGACATCGCTTAT+TGG 0.257721 4.3:-85137137 MS.gene034005:CDS
GATTCCCATTCTTGCATAAC+AGG 0.259251 4.3:+85137160 None:intergenic
AGTTTAGTGTCAGTGGAATT+TGG 0.269993 4.3:-85138166 MS.gene034005:CDS
AGTAATGGACATTCACAAAA+TGG 0.278392 4.3:-85139068 MS.gene034005:CDS
TATTAGGAACGGGCGGAATA+TGG 0.284839 4.3:+85139108 None:intergenic
GTAAGGTGCAAGTTTATTCT+TGG 0.296335 4.3:+85135235 None:intergenic
TGTCTCAGAATGTTGCGTTT+TGG 0.296796 4.3:-85135369 MS.gene034005:CDS
CTGCAAGCCACTTCAGCATC+TGG 0.302779 4.3:-85137720 MS.gene034005:CDS
CTCTTCTCTGAGGAATTATT+AGG 0.326160 4.3:+85139092 None:intergenic
GCTGAAGTGGCTTGCAGCTC+AGG 0.329316 4.3:+85137726 None:intergenic
TCTTTATCTTGCTTCTCCTT+TGG 0.336159 4.3:+85135299 None:intergenic
ATCTCAATCTACAACATATA+TGG 0.339248 4.3:-85140271 MS.gene034005:CDS
CACGATAACCTTGTATTAAC+CGG 0.339824 4.3:+85137757 None:intergenic
AACAAATTCGGCAGACGGTT+TGG 0.361786 4.3:+85139642 None:intergenic
GATAATTCTTCAAGGCTTAG+AGG 0.370730 4.3:+85135266 None:intergenic
CGCAAGGAACTTGCGTCTAA+TGG 0.372250 4.3:-85137697 MS.gene034005:intron
GCTTTGCGCTCGCCATTCAA+TGG 0.384435 4.3:+85136927 None:intergenic
CTCAACCTGTTATGCAAGAA+TGG 0.387119 4.3:-85137165 MS.gene034005:CDS
CAATATTCTTTAAACGATGA+AGG 0.393477 4.3:+85136342 None:intergenic
CCGTCTGCCGAATTTGTTGC+TGG 0.396519 4.3:-85139637 MS.gene034005:CDS
CATCGCTTATTGGAGCGATA+TGG 0.400187 4.3:-85137127 MS.gene034005:CDS
AATTGAATCAGTAATATTAG+AGG 0.407971 4.3:-85135507 MS.gene034005:intron
GAGCATGAGAATGAAGAAAC+TGG 0.410340 4.3:-85136390 MS.gene034005:CDS
CCCAGTTGGATAATTCTTCA+AGG 0.414735 4.3:+85135258 None:intergenic
ACGCTCCCTCGCAATGCAAT+GGG 0.419172 4.3:-85134982 MS.gene034005:CDS
ATTTCTCCGTAGTCTTTGTC+TGG 0.420974 4.3:+85135341 None:intergenic
GTAATGGACATTCACAAAAT+GGG 0.425915 4.3:-85139067 MS.gene034005:CDS
TCTGAGGAATTATTAGGAAC+GGG 0.426016 4.3:+85139098 None:intergenic
CCTCTATGTGATGAATAATT+CGG 0.426522 4.3:-85139545 MS.gene034005:intron
GCCTTGAAGAATTATCCAAC+TGG 0.429353 4.3:-85135259 MS.gene034005:CDS
TGTGTATGAACAACTCCCTT+AGG 0.445619 4.3:+85138841 None:intergenic
CCATTCAACCATACCTTGTA+AGG 0.450089 4.3:+85135218 None:intergenic
GTTGAAATCCAGGGAAATCT+TGG 0.451333 4.3:-85139688 MS.gene034005:intron
GTACTTGCGACTTGGTTTAG+TGG 0.452867 4.3:-85139613 MS.gene034005:CDS
AAGTACTCCAGCAACAAATT+CGG 0.453295 4.3:+85139630 None:intergenic
CTAACCTGCACACCAGGAAA+TGG 0.458093 4.3:+85136888 None:intergenic
ACATAGAGGAGCTCTACTTC+TGG 0.459113 4.3:+85139559 None:intergenic
AAATTGAGAAGAAGAGAAGA+TGG 0.459189 4.3:+85141558 None:intergenic
TTGAATGGCGAGCGCAAAGC+AGG 0.462485 4.3:-85136924 MS.gene034005:CDS
TTGTATACTAGCGGGACAAC+AGG 0.464707 4.3:-85138868 MS.gene034005:CDS
CATACTTACTCCAGTGAATA+CGG 0.469363 4.3:+85138088 None:intergenic
CCTTGCGCCAGATGCTGAAG+TGG 0.474939 4.3:+85137713 None:intergenic
GACGCTCCCTCGCAATGCAA+TGG 0.475140 4.3:-85134983 MS.gene034005:CDS
TGATGGAAGGGAGGTAGAAG+AGG 0.476308 4.3:+85141622 None:intergenic
AAAACCATTTCCTGGTGTGC+AGG 0.476589 4.3:-85136892 MS.gene034005:intron
AATCTTGGTGGAGCTCGAAT+AGG 0.490823 4.3:-85139673 MS.gene034005:CDS
CATTCTTGCATAACAGGTTG+AGG 0.493045 4.3:+85137166 None:intergenic
ATTAACCGGGTGTACATAGT+TGG 0.494598 4.3:+85137771 None:intergenic
GAGTGAATTTATGGGGATGA+TGG 0.495545 4.3:+85141605 None:intergenic
GAATAAACTTGCACCTTACA+AGG 0.497001 4.3:-85135231 MS.gene034005:intron
TCCTCAGAGAAGAGCAGTAA+TGG 0.497489 4.3:-85139083 MS.gene034005:CDS
ATTTGGCTCAGGTGAAGATC+CGG 0.499188 4.3:-85138899 MS.gene034005:intron
AATTGAGAAGAAGAGAAGAT+GGG 0.499559 4.3:+85141559 None:intergenic
AATGGTATTTACTGTTCTGA+AGG 0.500792 4.3:+85134813 None:intergenic
GACGATGGATACTTTAAGAC+TGG 0.501182 4.3:-85135990 MS.gene034005:CDS
GAATTTATGGGGATGATGGA+AGG 0.503153 4.3:+85141609 None:intergenic
TTGCTGGAGTACTTGCGACT+TGG 0.503599 4.3:-85139621 MS.gene034005:CDS
TCAACCTGTTATGCAAGAAT+GGG 0.504435 4.3:-85137164 MS.gene034005:CDS
AATATTCTTTAAACGATGAA+GGG 0.504764 4.3:+85136343 None:intergenic
GATGGAAGGGAGGTAGAAGA+GGG 0.506952 4.3:+85141623 None:intergenic
CTCTGAGGAATTATTAGGAA+CGG 0.512730 4.3:+85139097 None:intergenic
ACCGTCGGAAAACCATTTCC+TGG 0.512963 4.3:-85136900 MS.gene034005:CDS
TCAGCTTTAGATCCTTCAGT+TGG 0.515164 4.3:+85138122 None:intergenic
CCGTGGAACCTGCGTAGAGA+GGG 0.516939 4.3:+85138350 None:intergenic
CCCTCTCTACGCAGGTTCCA+CGG 0.516961 4.3:-85138350 MS.gene034005:intron
GCATTGTCAAATCCATTGAA+TGG 0.519766 4.3:-85136939 MS.gene034005:CDS
AAGCAAGAAGCTGCAGCTCA+TGG 0.521419 4.3:-85140228 MS.gene034005:CDS
ACACAGAAGCATCCTTGCTC+AGG 0.530891 4.3:-85138821 MS.gene034005:intron
CCAAACCTTGACAAAAGCAT+GGG 0.537226 4.3:-85138602 MS.gene034005:CDS
TCGATGTTTCTAGTTTGTCA+TGG 0.542982 4.3:-85136961 MS.gene034005:intron
CGGGACAACAGGTAAACCTA+AGG 0.543179 4.3:-85138857 MS.gene034005:CDS
AATACAAGGTTATCGTGCTA+TGG 0.543439 4.3:-85137751 MS.gene034005:CDS
CAAGAATGGGAATCCATCAC+TGG 0.546151 4.3:-85137151 MS.gene034005:CDS
GCTCAACTAACCTGCACACC+AGG 0.548833 4.3:+85136882 None:intergenic
GCAGTTACTACGGATAAAGA+TGG 0.552792 4.3:-85135963 MS.gene034005:CDS
TCAGTGGAATTTGGAAGAGA+TGG 0.553750 4.3:-85138157 MS.gene034005:CDS
GACTGGAGATGCAGTTACTA+CGG 0.556507 4.3:-85135973 MS.gene034005:CDS
CCGAATTATTCATCACATAG+AGG 0.556775 4.3:+85139545 None:intergenic
TTGCCGAAGTTTAGTGTCAG+TGG 0.557108 4.3:-85138173 MS.gene034005:CDS
TCCAAACCTTGACAAAAGCA+TGG 0.558392 4.3:-85138603 MS.gene034005:CDS
GAGCGCAAAGCAGGCACCGT+CGG 0.558532 4.3:-85136915 MS.gene034005:CDS
GGTGCTATAACCGTATTCAC+TGG 0.559650 4.3:-85138098 MS.gene034005:CDS
TTACTGGCCCCTCTCTACGC+AGG 0.560115 4.3:-85138358 MS.gene034005:CDS
TTTGTTGAGAGTCTTAAATG+AGG 0.563825 4.3:+85141651 None:intergenic
AATTTATGGGGATGATGGAA+GGG 0.564665 4.3:+85141610 None:intergenic
ACCTTCCCCATTGCATTGCG+AGG 0.567106 4.3:+85134976 None:intergenic
ATGTACACCCGGTTAATACA+AGG 0.574328 4.3:-85137765 MS.gene034005:CDS
GGCTTACCAGACAAAGACTA+CGG 0.574953 4.3:-85135347 MS.gene034005:CDS
CCCTCGCAATGCAATGGGGA+AGG 0.576410 4.3:-85134977 MS.gene034005:intron
ACGCAACATTCTGAGACAGT+TGG 0.578421 4.3:+85135374 None:intergenic
TCTGGATAGCTGAGTGCAAG+TGG 0.578460 4.3:+85139577 None:intergenic
ACCGTGGAACCTGCGTAGAG+AGG 0.581544 4.3:+85138349 None:intergenic
CTAGTATACAAAATCAGTGC+CGG 0.583079 4.3:+85138880 None:intergenic
CCACTTCAGCATCTGGCGCA+AGG 0.583841 4.3:-85137713 MS.gene034005:CDS
GAAATCCAGGGAAATCTTGG+TGG 0.584081 4.3:-85139685 MS.gene034005:intron
TTATGGGGATGATGGAAGGG+AGG 0.584838 4.3:+85141613 None:intergenic
CCTTCCCCATTGCATTGCGA+GGG 0.586496 4.3:+85134977 None:intergenic
CATTCTATTACTCAGATGTG+TGG 0.588350 4.3:-85137202 MS.gene034005:intron
ATTGAGAAGAAGAGAAGATG+GGG 0.588620 4.3:+85141560 None:intergenic
CAATAAGCGATGTCCAGTGA+TGG 0.591538 4.3:+85137138 None:intergenic
TTGTGCGATTATCGTGCCAA+AGG 0.592723 4.3:-85135315 MS.gene034005:CDS
CCAGCAACAAATTCGGCAGA+CGG 0.593121 4.3:+85139637 None:intergenic
CCTTGAAGAATTATCCAACT+GGG 0.594518 4.3:-85135258 MS.gene034005:CDS
ATGGTGGTGAGTGAATTTAT+GGG 0.594754 4.3:+85141597 None:intergenic
CTTGCGACTTGGTTTAGTGG+AGG 0.596081 4.3:-85139610 MS.gene034005:CDS
AAGATATCTAATCTCTTGTG+TGG 0.596230 4.3:-85140141 MS.gene034005:CDS
CGTGAGTCATATCCAACTGA+AGG 0.605168 4.3:-85138134 MS.gene034005:CDS
ACTGAAGGATCTAAAGCTGA+TGG 0.608878 4.3:-85138119 MS.gene034005:CDS
TAATGGACATTCACAAAATG+GGG 0.610443 4.3:-85139066 MS.gene034005:CDS
TTGAGAAGAAGAGAAGATGG+GGG 0.610961 4.3:+85141561 None:intergenic
AAGGAATCATTTACAGACGA+TGG 0.612731 4.3:-85136005 MS.gene034005:CDS
CTTTCATGGATATGATGTAG+TGG 0.616246 4.3:+85138544 None:intergenic
TCATAAAGCATACCTGAGCA+AGG 0.617886 4.3:+85138809 None:intergenic
AAGTTTATTCTTGGCCCAGT+TGG 0.618670 4.3:+85135244 None:intergenic
TCCCACACGATTAGTCGAGT+TGG 0.618951 4.3:+85135006 None:intergenic
TACCAACTCGACTAATCGTG+TGG 0.621684 4.3:-85135008 MS.gene034005:CDS
ATATATGAAGTACATGTCCA+CGG 0.624150 4.3:-85138394 MS.gene034005:intron
TCCATTACTGCTCTTCTCTG+AGG 0.625180 4.3:+85139082 None:intergenic
ATTCCACTGACACTAAACTT+CGG 0.629573 4.3:+85138170 None:intergenic
GAGAATGAAGAAACTGGAGC+TGG 0.632470 4.3:-85136384 MS.gene034005:CDS
AATTCTTCAAGGCTTAGAGG+AGG 0.633061 4.3:+85135269 None:intergenic
TCAATCTACAACATATATGG+AGG 0.639302 4.3:-85140268 MS.gene034005:CDS
GGGACAACAGGTAAACCTAA+GGG 0.643408 4.3:-85138856 MS.gene034005:CDS
TATATGAAGTACATGTCCAC+GGG 0.644345 4.3:-85138393 MS.gene034005:intron
CGTGGAACCTGCGTAGAGAG+GGG 0.649202 4.3:+85138351 None:intergenic
ACGATAACCTTGTATTAACC+GGG 0.652167 4.3:+85137758 None:intergenic
TGGTGGTGAGTGAATTTATG+GGG 0.655100 4.3:+85141598 None:intergenic
TTACAAGCAACTCATCTCGT+CGG 0.660566 4.3:-85140169 MS.gene034005:CDS
AATGCGGATATAATCAAGAG+TGG 0.667412 4.3:-85135554 MS.gene034005:CDS
GCGGATATAATCAAGAGTGG+TGG 0.670937 4.3:-85135551 MS.gene034005:CDS
AGAATATTGGAAACTTCCTG+AGG 0.673119 4.3:-85136328 MS.gene034005:intron
ACCAACTCGACTAATCGTGT+GGG 0.673721 4.3:-85135007 MS.gene034005:CDS
AGGTTCCAACTATGTACACC+CGG 0.678598 4.3:-85137776 MS.gene034005:CDS
GTAAACCATTGAAAATCCCG+TGG 0.679256 4.3:+85138377 None:intergenic
GAGGAATTATTAGGAACGGG+CGG 0.680276 4.3:+85139101 None:intergenic
CTTGTGTGGAAATGATGTGA+AGG 0.681768 4.3:-85140127 MS.gene034005:intron
CAAACCTTGACAAAAGCATG+GGG 0.685674 4.3:-85138601 MS.gene034005:CDS
CGCTCCCTCGCAATGCAATG+GGG 0.686193 4.3:-85134981 MS.gene034005:CDS
AACAGGTTGAGGAAGTGCAG+AGG 0.696442 4.3:+85137177 None:intergenic
AAACCTTGACAAAAGCATGG+GGG 0.779941 4.3:-85138600 MS.gene034005:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAAAATTTCATATAAA+AGG + chr4.3:85137072-85137091 None:intergenic 10.0%
!! CTTAATAAAAATTTGATTAT+AGG - chr4.3:85137269-85137288 MS.gene034005:intron 10.0%
!!! ATTTTAAAAAAAAAGTTCAT+GGG - chr4.3:85135441-85135460 MS.gene034005:intron 10.0%
!!! TATTTTAAAAAAAAAGTTCA+TGG - chr4.3:85135440-85135459 MS.gene034005:intron 10.0%
!!! TCTAAATAATTTTTTAATGA+AGG - chr4.3:85138683-85138702 MS.gene034005:intron 10.0%
!!! TTATAATTTTTCTTGATTTT+AGG - chr4.3:85137853-85137872 MS.gene034005:intron 10.0%
!!! TTTTTTTAATTAAACAAAAC+AGG + chr4.3:85135084-85135103 None:intergenic 10.0%
!! AAAAACTTATATGTTCAAAA+TGG + chr4.3:85138245-85138264 None:intergenic 15.0%
!! AGAATAACTTTATATAAATG+TGG + chr4.3:85136650-85136669 None:intergenic 15.0%
!! ATATTAAGTATTCAATTTCA+TGG + chr4.3:85135532-85135551 None:intergenic 15.0%
!! GAATAACTTTATATAAATGT+GGG + chr4.3:85136649-85136668 None:intergenic 15.0%
!! TAAATAATTTACAACCTTAT+TGG - chr4.3:85140825-85140844 MS.gene034005:intron 15.0%
!! TAAATTATTCTTATAAGTGT+TGG - chr4.3:85135585-85135604 MS.gene034005:intron 15.0%
!! TCATATATTACTTTATTCAA+TGG + chr4.3:85139918-85139937 None:intergenic 15.0%
!! TTGCAAAATATTATTTAGAA+AGG - chr4.3:85141582-85141601 MS.gene034005:CDS 15.0%
!!! AAAATTGATATTTTCTTTTC+TGG + chr4.3:85138197-85138216 None:intergenic 15.0%
!!! AAATGGATTTTTTTTTACTA+TGG - chr4.3:85135102-85135121 MS.gene034005:intron 15.0%
!!! AATTTGATTTAATATGTTGT+TGG - chr4.3:85135183-85135202 MS.gene034005:intron 15.0%
!!! ATTTGATTTAATATGTTGTT+GGG - chr4.3:85135184-85135203 MS.gene034005:intron 15.0%
!!! TCTTTTTTTACCTTTTATTA+TGG - chr4.3:85136606-85136625 MS.gene034005:intron 15.0%
!!! TTTGTAATTTCTCTTATTTT+GGG - chr4.3:85135653-85135672 MS.gene034005:intron 15.0%
!!! TTTTGTAATTTCTCTTATTT+TGG - chr4.3:85135652-85135671 MS.gene034005:intron 15.0%
!! AAAGCATAATTAAAGCATAA+AGG + chr4.3:85137238-85137257 None:intergenic 20.0%
!! AATATTCTTTAAACGATGAA+GGG + chr4.3:85140139-85140158 None:intergenic 20.0%
!! AATTGAATCAGTAATATTAG+AGG - chr4.3:85140972-85140991 MS.gene034005:intron 20.0%
!! AGATTATATACAAAAAACCA+AGG + chr4.3:85138466-85138485 None:intergenic 20.0%
!! AGATTGAGATACTATATAAT+AGG + chr4.3:85136198-85136217 None:intergenic 20.0%
!! AGCTTATAATTAACAGATTT+GGG - chr4.3:85135781-85135800 MS.gene034005:intron 20.0%
!! ATAAACTGTACAACTATATA+AGG + chr4.3:85141049-85141068 None:intergenic 20.0%
!! ATCTAATGAATTCATATGTA+AGG - chr4.3:85136154-85136173 MS.gene034005:intron 20.0%
!! TAAACTGTACAACTATATAA+GGG + chr4.3:85141048-85141067 None:intergenic 20.0%
!! TAACAAAAACTAACAATCAT+GGG + chr4.3:85141020-85141039 None:intergenic 20.0%
!! TAACTAAATAAATGTATCTG+CGG - chr4.3:85136003-85136022 MS.gene034005:CDS 20.0%
!! TAGCTTATAATTAACAGATT+TGG - chr4.3:85135780-85135799 MS.gene034005:intron 20.0%
!! TGCATATAAAAAAACTTTCA+TGG + chr4.3:85137952-85137971 None:intergenic 20.0%
!! TTAACAAAAACTAACAATCA+TGG + chr4.3:85141021-85141040 None:intergenic 20.0%
!! TTTGTTTAGTCAATCATTTA+TGG - chr4.3:85136767-85136786 MS.gene034005:intron 20.0%
!!! AAATAGTGTTTGAAATTGTA+AGG - chr4.3:85135401-85135420 MS.gene034005:intron 20.0%
!!! AATAAAAAAGGGTATATTAG+TGG + chr4.3:85139747-85139766 None:intergenic 20.0%
!!! AATGTTTTCTACTTTTTATC+AGG - chr4.3:85140898-85140917 MS.gene034005:intron 20.0%
!!! ACTTAATCAATGTTTCTTTT+AGG - chr4.3:85138913-85138932 MS.gene034005:intron 20.0%
!!! ATATGAAATTTTCAAATAGC+TGG - chr4.3:85137075-85137094 MS.gene034005:intron 20.0%
!!! ATCATATATACTTTTCACAA+AGG + chr4.3:85137119-85137138 None:intergenic 20.0%
!!! ATGATTGTAAAACATGTTTT+CGG - chr4.3:85138646-85138665 MS.gene034005:intron 20.0%
!!! CTTAATCAATGTTTCTTTTA+GGG - chr4.3:85138914-85138933 MS.gene034005:intron 20.0%
!!! TACAATTTCAAACACTATTT+TGG + chr4.3:85135401-85135420 None:intergenic 20.0%
!!! TATGCTTTAATTATGCTTTT+TGG - chr4.3:85137239-85137258 MS.gene034005:intron 20.0%
!!! TTTGATTTAATATGTTGTTG+GGG - chr4.3:85135185-85135204 MS.gene034005:intron 20.0%
!!! TTTGCTATTTCCATAATAAA+AGG + chr4.3:85136619-85136638 None:intergenic 20.0%
!!! TTTTGCTCATATGTTTTATT+GGG - chr4.3:85135133-85135152 MS.gene034005:intron 20.0%
!!! TTTTTGCTCATATGTTTTAT+TGG - chr4.3:85135132-85135151 MS.gene034005:intron 20.0%
! AAAAAAAAGTTCATGGGAAT+TGG - chr4.3:85135447-85135466 MS.gene034005:intron 25.0%
! AAAATCAATGTTGTCAATTG+TGG + chr4.3:85141332-85141351 None:intergenic 25.0%
! AAATAGATATCTTCTTGTTC+AGG - chr4.3:85136103-85136122 MS.gene034005:intron 25.0%
! AAATTACAGTTCGTTGTAAA+TGG + chr4.3:85138624-85138643 None:intergenic 25.0%
! AACATCGATACAATAATGTA+AGG + chr4.3:85139506-85139525 None:intergenic 25.0%
! AATATGGAAAAATTGAGATG+AGG + chr4.3:85137358-85137377 None:intergenic 25.0%
! ATCTCAATCTACAACATATA+TGG - chr4.3:85136208-85136227 MS.gene034005:intron 25.0%
! ATCTCATGCATGATTAATAA+TGG - chr4.3:85135354-85135373 MS.gene034005:CDS 25.0%
! ATGATAATTGTGATGTATCA+AGG + chr4.3:85141390-85141409 None:intergenic 25.0%
! ATGTTGAAAGTTGAAATCTA+AGG + chr4.3:85135923-85135942 None:intergenic 25.0%
! CAATATTCTTTAAACGATGA+AGG + chr4.3:85140140-85140159 None:intergenic 25.0%
! CATGTACTTCATATATGTTA+AGG + chr4.3:85138081-85138100 None:intergenic 25.0%
! CATTTGACCAATATGATATA+CGG - chr4.3:85136445-85136464 MS.gene034005:intron 25.0%
! CCAAAGATTAAAATGTTTGA+AGG + chr4.3:85138824-85138843 None:intergenic 25.0%
! CTTCATCGTTTAAAGAATAT+TGG - chr4.3:85140138-85140157 MS.gene034005:CDS 25.0%
! GAAAATAAATTATCTTTCCC+TGG - chr4.3:85138497-85138516 MS.gene034005:intron 25.0%
! GCTTATAATTAACAGATTTG+GGG - chr4.3:85135782-85135801 MS.gene034005:intron 25.0%
! TAATTAAACAAAACAGGACA+AGG + chr4.3:85135078-85135097 None:intergenic 25.0%
! TCTTACAAAGAGAATAGTAA+AGG + chr4.3:85136400-85136419 None:intergenic 25.0%
! TGAACAAGAAGATATCTATT+TGG + chr4.3:85136104-85136123 None:intergenic 25.0%
! TTCAAAAATAACCTTACCTA+CGG - chr4.3:85137149-85137168 MS.gene034005:CDS 25.0%
!! AAATAGTCCAACTAATTTGT+TGG + chr4.3:85137200-85137219 None:intergenic 25.0%
!! AAGATTCTAAGGATAGAAAA+CGG - chr4.3:85140394-85140413 MS.gene034005:intron 25.0%
!! ATCTTTGGAAAGAAGATAAA+TGG - chr4.3:85138836-85138855 MS.gene034005:CDS 25.0%
!! ATTTTCCATTGACATTATCT+TGG - chr4.3:85137044-85137063 MS.gene034005:intron 25.0%
!! CTATTTGGTATTTTACTCAA+GGG + chr4.3:85136089-85136108 None:intergenic 25.0%
!! GATGGATATTTCATCATTTT+AGG - chr4.3:85140534-85140553 MS.gene034005:intron 25.0%
!! TATTTTGCAATGAAATGACA+AGG + chr4.3:85141572-85141591 None:intergenic 25.0%
!! TCAAAATGGATACTATTTTG+AGG + chr4.3:85138231-85138250 None:intergenic 25.0%
!! TCTATTTGGTATTTTACTCA+AGG + chr4.3:85136090-85136109 None:intergenic 25.0%
!! TGTTCTTTGTTTGAAATTTC+AGG - chr4.3:85141614-85141633 MS.gene034005:CDS 25.0%
!! TTGAAAAGTACACTAACATA+TGG + chr4.3:85135503-85135522 None:intergenic 25.0%
!!! AAATTGAGATGAGGTTTTAT+TGG + chr4.3:85137349-85137368 None:intergenic 25.0%
!!! AAGATAATTTATTTTCAGGC+AGG + chr4.3:85138493-85138512 None:intergenic 25.0%
!!! AATTTGTATTTTTTCCATGC+AGG - chr4.3:85140446-85140465 MS.gene034005:intron 25.0%
!!! ACATTTTCAGCTTCTAAAAA+TGG - chr4.3:85137492-85137511 MS.gene034005:intron 25.0%
!!! CACATTATTTTAGTTACTTG+AGG - chr4.3:85140316-85140335 MS.gene034005:intron 25.0%
!!! CCTTCAAACATTTTAATCTT+TGG - chr4.3:85138821-85138840 MS.gene034005:intron 25.0%
!!! CTTATTTTCATAAGTTCTCT+AGG - chr4.3:85136558-85136577 MS.gene034005:intron 25.0%
!!! CTTGTTTTTGTTACTTACAA+TGG - chr4.3:85134988-85135007 MS.gene034005:CDS 25.0%
!!! CTTTTGTTTTTCGTATCATT+TGG - chr4.3:85137563-85137582 MS.gene034005:intron 25.0%
!!! GGGAAAGATAATTTATTTTC+AGG + chr4.3:85138497-85138516 None:intergenic 25.0%
!!! TATTCTTATAAGTGTTGGTA+TGG - chr4.3:85135590-85135609 MS.gene034005:intron 25.0%
!!! TTTGCTCATATGTTTTATTG+GGG - chr4.3:85135134-85135153 MS.gene034005:intron 25.0%
AAATGAAAAGATCCATCTCA+AGG + chr4.3:85140644-85140663 None:intergenic 30.0%
AAATTGAGAAGAAGAGAAGA+TGG + chr4.3:85134924-85134943 None:intergenic 30.0%
AAGATATCTAATCTCTTGTG+TGG - chr4.3:85136338-85136357 MS.gene034005:CDS 30.0%
AAGGAAAAAGAAAATTACCG+TGG + chr4.3:85138149-85138168 None:intergenic 30.0%
AATAAGCTGAAAACAGCATA+TGG + chr4.3:85138989-85139008 None:intergenic 30.0%
AATTGAGAAGAAGAGAAGAT+GGG + chr4.3:85134923-85134942 None:intergenic 30.0%
ACATCGTAGGAATTCAAATT+TGG + chr4.3:85140618-85140637 None:intergenic 30.0%
AGAATAGTAAAGGAATGTCA+AGG + chr4.3:85136390-85136409 None:intergenic 30.0%
ATATATGAAGTACATGTCCA+CGG - chr4.3:85138085-85138104 MS.gene034005:intron 30.0%
ATGAATAATTCGGTATGCTT+TGG - chr4.3:85136944-85136963 MS.gene034005:CDS 30.0%
ATTTCTCTAAGTATGATGTG+TGG - chr4.3:85140571-85140590 MS.gene034005:intron 30.0%
CATTGAGAAGATCTATGATA+TGG - chr4.3:85138425-85138444 MS.gene034005:intron 30.0%
CCTCTATGTGATGAATAATT+CGG - chr4.3:85136934-85136953 MS.gene034005:CDS 30.0%
CGTGGAGATACAATAAAAAA+GGG + chr4.3:85139758-85139777 None:intergenic 30.0%
CTTAGTTATTAGCAATTTGC+TGG + chr4.3:85140790-85140809 None:intergenic 30.0%
CTTGTGAACATTAAGAACTA+AGG - chr4.3:85137014-85137033 MS.gene034005:intron 30.0%
GACAAAGTAGAATACTATCT+TGG - chr4.3:85137514-85137533 MS.gene034005:intron 30.0%
GTAGAAAACATTTACTCAGT+AGG + chr4.3:85140890-85140909 None:intergenic 30.0%
TAAAAAAGAACTGAAGAAGC+TGG - chr4.3:85141641-85141660 MS.gene034005:CDS 30.0%
TAGTAGAAGTTAGATTGTGA+TGG - chr4.3:85140856-85140875 MS.gene034005:intron 30.0%
TATGTTGCCAACAAATTAGT+TGG - chr4.3:85137190-85137209 MS.gene034005:CDS 30.0%
TCAAAAATAACCTTACCTAC+GGG - chr4.3:85137150-85137169 MS.gene034005:CDS 30.0%
TCAATCTACAACATATATGG+AGG - chr4.3:85136211-85136230 MS.gene034005:intron 30.0%
TCCACTAACTATTACTTGAA+AGG - chr4.3:85139783-85139802 MS.gene034005:intron 30.0%
TCGTGGAGATACAATAAAAA+AGG + chr4.3:85139759-85139778 None:intergenic 30.0%
TGAACAATAAGCACTATGTT+TGG + chr4.3:85135827-85135846 None:intergenic 30.0%
TGAATTGGGATTTACTAAGA+GGG - chr4.3:85135709-85135728 MS.gene034005:intron 30.0%
TTAATGCTCAATGTGAAAGA+TGG - chr4.3:85140014-85140033 MS.gene034005:intron 30.0%
TTAGTTAATGTTCAACCCAA+CGG + chr4.3:85135990-85136009 None:intergenic 30.0%
TTCAACAACCATTAGAAGAA+AGG + chr4.3:85135737-85135756 None:intergenic 30.0%
TTGCTATGTAAGAAGTGAAA+AGG + chr4.3:85138168-85138187 None:intergenic 30.0%
TTGCTTCTAATCACAGAAAA+TGG - chr4.3:85139635-85139654 MS.gene034005:CDS 30.0%
TTTCTGTGATTAGAAGCAAA+TGG + chr4.3:85139634-85139653 None:intergenic 30.0%
TTTGTTGAGAGTCTTAAATG+AGG + chr4.3:85134831-85134850 None:intergenic 30.0%
! AACATTGATAATTAGTGCTC+TGG - chr4.3:85135882-85135901 MS.gene034005:intron 30.0%
! AGAATCTAATGTCTTGTTCA+AGG - chr4.3:85138275-85138294 MS.gene034005:intron 30.0%
! AGGAGAATGATTTGTGTTTA+CGG + chr4.3:85141552-85141571 None:intergenic 30.0%
! ATGTCATAAGCTATTTCCAT+AGG + chr4.3:85138964-85138983 None:intergenic 30.0%
! ATGTCTTCAATTAGAAGTGT+TGG - chr4.3:85135312-85135331 MS.gene034005:CDS 30.0%
! CTACTATTTTGTTGCCAATA+AGG + chr4.3:85140842-85140861 None:intergenic 30.0%
! CTCATATTAAGTGTTGTTCA+AGG + chr4.3:85139884-85139903 None:intergenic 30.0%
! CTTGATCTTTCAATGTTTTC+CGG + chr4.3:85137462-85137481 None:intergenic 30.0%
! CTTTTTATCAGGTACTAATG+CGG - chr4.3:85140909-85140928 MS.gene034005:intron 30.0%
! GTTTTCTATCCTTAGAATCT+TGG + chr4.3:85140395-85140414 None:intergenic 30.0%
! TAATGGACATTCACAAAATG+GGG - chr4.3:85137413-85137432 MS.gene034005:intron 30.0%
! TCCTTTCAAGTAATAGTTAG+TGG + chr4.3:85139787-85139806 None:intergenic 30.0%
! TCTTGTTCAGGCTTTATATA+TGG - chr4.3:85136115-85136134 MS.gene034005:intron 30.0%
! TTAATAATGGCTGCATGTTT+TGG - chr4.3:85135367-85135386 MS.gene034005:CDS 30.0%
! TTGATCTTTCAATGTTTTCC+GGG + chr4.3:85137461-85137480 None:intergenic 30.0%
!! AGTAATGGACATTCACAAAA+TGG - chr4.3:85137411-85137430 MS.gene034005:intron 30.0%
!! CTTTTAGGGATTGTTTAGAT+TGG - chr4.3:85138928-85138947 MS.gene034005:intron 30.0%
!! GTAATGGACATTCACAAAAT+GGG - chr4.3:85137412-85137431 MS.gene034005:intron 30.0%
!! TAGCAATTTGCTGGTATATA+AGG + chr4.3:85140781-85140800 None:intergenic 30.0%
!! TGAGGACATAATTTGTTCTA+AGG - chr4.3:85140334-85140353 MS.gene034005:intron 30.0%
!! TTTCATAAGTTCTCTAGGAT+AGG - chr4.3:85136563-85136582 MS.gene034005:intron 30.0%
!!! CAGATTTTTGAGATTGAGAA+TGG + chr4.3:85139248-85139267 None:intergenic 30.0%
!!! GGTGGTGAATTTTTTTATCT+TGG - chr4.3:85135155-85135174 MS.gene034005:intron 30.0%
!!! TTTCATCATTTTAGGACGTA+AGG - chr4.3:85140542-85140561 MS.gene034005:intron 30.0%
AAGGAATCATTTACAGACGA+TGG - chr4.3:85140474-85140493 MS.gene034005:intron 35.0%
AAGTACTCCAGCAACAAATT+CGG + chr4.3:85136852-85136871 None:intergenic 35.0%
AATACAAGGTTATCGTGCTA+TGG - chr4.3:85138728-85138747 MS.gene034005:intron 35.0%
AATGCGGATATAATCAAGAG+TGG - chr4.3:85140925-85140944 MS.gene034005:intron 35.0%
ACGATAACCTTGTATTAACC+GGG + chr4.3:85138724-85138743 None:intergenic 35.0%
ACTAAGTTGTTTATCCAAGC+AGG - chr4.3:85139152-85139171 MS.gene034005:CDS 35.0%
AGAATATTGGAAACTTCCTG+AGG - chr4.3:85140151-85140170 MS.gene034005:CDS 35.0%
AGGTACCAAGATAATGTCAA+TGG + chr4.3:85137052-85137071 None:intergenic 35.0%
AGTTTAGTGTCAGTGGAATT+TGG - chr4.3:85138313-85138332 MS.gene034005:intron 35.0%
ATTCCACTGACACTAAACTT+CGG + chr4.3:85138312-85138331 None:intergenic 35.0%
ATTGAGAAGAAGAGAAGATG+GGG + chr4.3:85134922-85134941 None:intergenic 35.0%
CAACAAAGAACACCATCATA+TGG + chr4.3:85138552-85138571 None:intergenic 35.0%
CACACATCTGAGTAATAGAA+TGG + chr4.3:85139279-85139298 None:intergenic 35.0%
CACGATAACCTTGTATTAAC+CGG + chr4.3:85138725-85138744 None:intergenic 35.0%
CATACTTACTCCAGTGAATA+CGG + chr4.3:85138394-85138413 None:intergenic 35.0%
CATTCTATTACTCAGATGTG+TGG - chr4.3:85139277-85139296 MS.gene034005:intron 35.0%
CCAAAATGAATCTTCCAACA+AGG - chr4.3:85140666-85140685 MS.gene034005:intron 35.0%
CCGAATTATTCATCACATAG+AGG + chr4.3:85136937-85136956 None:intergenic 35.0%
CCTTGAAGAATTATCCAACT+GGG - chr4.3:85141221-85141240 MS.gene034005:intron 35.0%
CTAAGTTGTTTATCCAAGCA+GGG - chr4.3:85139153-85139172 MS.gene034005:CDS 35.0%
CTAGTATACAAAATCAGTGC+CGG + chr4.3:85137602-85137621 None:intergenic 35.0%
CTGAATTGGGATTTACTAAG+AGG - chr4.3:85135708-85135727 MS.gene034005:intron 35.0%
CTTCGTATGATTATACTCCA+GGG + chr4.3:85138517-85138536 None:intergenic 35.0%
CTTTCAACATTTCAGAACCT+AGG - chr4.3:85135933-85135952 MS.gene034005:intron 35.0%
CTTTCATGGATATGATGTAG+TGG + chr4.3:85137938-85137957 None:intergenic 35.0%
GAATAAACTTGCACCTTACA+AGG - chr4.3:85141248-85141267 MS.gene034005:intron 35.0%
GATAATTCTTCAAGGCTTAG+AGG + chr4.3:85141216-85141235 None:intergenic 35.0%
GATTGGATTATTTGAGCCTA+TGG - chr4.3:85138945-85138964 MS.gene034005:intron 35.0%
GCAATTTCAGAAGCTGAATT+GGG - chr4.3:85135695-85135714 MS.gene034005:intron 35.0%
GCATTGTCAAATCCATTGAA+TGG - chr4.3:85139540-85139559 MS.gene034005:intron 35.0%
GGAACTTCCGTATATCATAT+TGG + chr4.3:85136455-85136474 None:intergenic 35.0%
GGTTGTGTTTCACCAAAAAA+AGG + chr4.3:85140754-85140773 None:intergenic 35.0%
GTAAGGTGCAAGTTTATTCT+TGG + chr4.3:85141247-85141266 None:intergenic 35.0%
GTGCGATGTTATGATTGTAA+TGG + chr4.3:85140299-85140318 None:intergenic 35.0%
GTTTCACCAAAAAAAGGAGA+GGG + chr4.3:85140748-85140767 None:intergenic 35.0%
TATATGAAGTACATGTCCAC+GGG - chr4.3:85138086-85138105 MS.gene034005:intron 35.0%
TCAACCTGTTATGCAAGAAT+GGG - chr4.3:85139315-85139334 MS.gene034005:intron 35.0%
TCAGTAATATTAGAGGCAAG+TGG - chr4.3:85140979-85140998 MS.gene034005:intron 35.0%
TCATGGGAATTGGAAATTGT+GGG - chr4.3:85135457-85135476 MS.gene034005:intron 35.0%
TCTGAGGAATTATTAGGAAC+GGG + chr4.3:85137384-85137403 None:intergenic 35.0%
TCTTCGTATGATTATACTCC+AGG + chr4.3:85138518-85138537 None:intergenic 35.0%
TCTTTATCTTGCTTCTCCTT+TGG + chr4.3:85141183-85141202 None:intergenic 35.0%
TGAAATTGCATGGCATTGTT+AGG + chr4.3:85135684-85135703 None:intergenic 35.0%
TGAATGCTTAGTCTATTGCT+GGG - chr4.3:85136693-85136712 MS.gene034005:intron 35.0%
TGATATACGGAAGTTCCTAT+AGG - chr4.3:85136458-85136477 MS.gene034005:intron 35.0%
TGCAATTTCAGAAGCTGAAT+TGG - chr4.3:85135694-85135713 MS.gene034005:intron 35.0%
TGTACTTCTTGTGCTAAGAA+TGG + chr4.3:85141287-85141306 None:intergenic 35.0%
TGTGAAAGATGGTGATATCT+TGG - chr4.3:85140025-85140044 MS.gene034005:intron 35.0%
TGTTTCACCAAAAAAAGGAG+AGG + chr4.3:85140749-85140768 None:intergenic 35.0%
TTCATGGGAATTGGAAATTG+TGG - chr4.3:85135456-85135475 MS.gene034005:intron 35.0%
TTGAATGCTTAGTCTATTGC+TGG - chr4.3:85136692-85136711 MS.gene034005:intron 35.0%
TTGTTCAAAGCTGAGTTGTT+TGG - chr4.3:85135840-85135859 MS.gene034005:intron 35.0%
TTTACGCTCTTAATTGTCCT+AGG + chr4.3:85135953-85135972 None:intergenic 35.0%
TTTGCTGGTATATAAGGAGA+GGG + chr4.3:85140775-85140794 None:intergenic 35.0%
! AAGAGCGTAAAAAGGTCAAT+TGG - chr4.3:85135962-85135981 MS.gene034005:CDS 35.0%
! AATAGTTAGTGGAGTATTCG+TGG + chr4.3:85139776-85139795 None:intergenic 35.0%
! AATGGTGGTGAGTGAATTTA+TGG + chr4.3:85134886-85134905 None:intergenic 35.0%
! ACAGACAGTTTGCAGATTTT+GGG - chr4.3:85135622-85135641 MS.gene034005:intron 35.0%
! AGAATGATTTGTGTTTACGG+CGG + chr4.3:85141549-85141568 None:intergenic 35.0%
! AGCTATCTTTGAAGAGCTTA+TGG + chr4.3:85139013-85139032 None:intergenic 35.0%
! ATGGTGGTGAGTGAATTTAT+GGG + chr4.3:85134885-85134904 None:intergenic 35.0%
! ATTTATGGCGTTGAAATCCA+GGG - chr4.3:85136782-85136801 MS.gene034005:intron 35.0%
! ATTTGCTGGTATATAAGGAG+AGG + chr4.3:85140776-85140795 None:intergenic 35.0%
! CCTTGTTGGAAGATTCATTT+TGG + chr4.3:85140669-85140688 None:intergenic 35.0%
! CTCTGAGGAATTATTAGGAA+CGG + chr4.3:85137385-85137404 None:intergenic 35.0%
! CTCTTCTCTGAGGAATTATT+AGG + chr4.3:85137390-85137409 None:intergenic 35.0%
! GGACAATTAAGAGCGTAAAA+AGG - chr4.3:85135954-85135973 MS.gene034005:CDS 35.0%
! TTTTTCCATGCAGGTAACAA+AGG - chr4.3:85140455-85140474 MS.gene034005:intron 35.0%
!! AATTAGAAGTGTTGGTGCTA+CGG - chr4.3:85135320-85135339 MS.gene034005:CDS 35.0%
!! AATTTATGGGGATGATGGAA+GGG + chr4.3:85134872-85134891 None:intergenic 35.0%
!! ATTCAGCTTCTGAAATTGCA+TGG + chr4.3:85135694-85135713 None:intergenic 35.0%
!! GTATGTTGATTTACCATGCA+TGG - chr4.3:85139184-85139203 MS.gene034005:CDS 35.0%
!! TCGATGTTTCTAGTTTGTCA+TGG - chr4.3:85139518-85139537 MS.gene034005:intron 35.0%
!! TTTTTCGTATCATTTGGCTC+AGG - chr4.3:85137569-85137588 MS.gene034005:intron 35.0%
!!! CACTGATTTTGTATACTAGC+GGG - chr4.3:85137603-85137622 MS.gene034005:intron 35.0%
!!! GCACTGATTTTGTATACTAG+CGG - chr4.3:85137602-85137621 MS.gene034005:intron 35.0%
AAAAAGGAGAGGGTTGTGTT+AGG + chr4.3:85140738-85140757 None:intergenic 40.0%
AACTTGCACCTTACAAGGTA+TGG - chr4.3:85141253-85141272 MS.gene034005:intron 40.0%
AAGTTTATTCTTGGCCCAGT+TGG + chr4.3:85141238-85141257 None:intergenic 40.0%
AATTCTTCAAGGCTTAGAGG+AGG + chr4.3:85141213-85141232 None:intergenic 40.0%
AATTGCAAGTGAACCATGCA+TGG + chr4.3:85139200-85139219 None:intergenic 40.0%
ACAGACAGTCCAAGATTCTA+AGG - chr4.3:85140383-85140402 MS.gene034005:intron 40.0%
ACCTACGGGAAGAAAAAAGT+TGG - chr4.3:85137164-85137183 MS.gene034005:CDS 40.0%
ACTACGCAACTTCATCATTC+GGG + chr4.3:85139990-85140009 None:intergenic 40.0%
ACTGTTTGTGGAAACAGCTT+AGG - chr4.3:85136511-85136530 MS.gene034005:intron 40.0%
AGAGGGTTCCTTTCTTCTAA+TGG - chr4.3:85135726-85135745 MS.gene034005:intron 40.0%
ATCATACGAAGACCGCATAT+CGG - chr4.3:85138526-85138545 MS.gene034005:intron 40.0%
ATGTACACCCGGTTAATACA+AGG - chr4.3:85138714-85138733 MS.gene034005:intron 40.0%
ATTAACCGGGTGTACATAGT+TGG + chr4.3:85138711-85138730 None:intergenic 40.0%
ATTTCTCCGTAGTCTTTGTC+TGG + chr4.3:85141141-85141160 None:intergenic 40.0%
CACTACGCAACTTCATCATT+CGG + chr4.3:85139991-85140010 None:intergenic 40.0%
CATTCTTGCATAACAGGTTG+AGG + chr4.3:85139316-85139335 None:intergenic 40.0%
CCATTCAACCATACCTTGTA+AGG + chr4.3:85141264-85141283 None:intergenic 40.0%
CCCAGTTGGATAATTCTTCA+AGG + chr4.3:85141224-85141243 None:intergenic 40.0%
CCTTACAAGGTATGGTTGAA+TGG - chr4.3:85141261-85141280 MS.gene034005:intron 40.0%
CTCAACCTGTTATGCAAGAA+TGG - chr4.3:85139314-85139333 MS.gene034005:intron 40.0%
CTTGTGTGGAAATGATGTGA+AGG - chr4.3:85136352-85136371 MS.gene034005:CDS 40.0%
GACTCTACGAAGTTTCACAT+TGG - chr4.3:85140702-85140721 MS.gene034005:intron 40.0%
GAGCATGAGAATGAAGAAAC+TGG - chr4.3:85140089-85140108 MS.gene034005:intron 40.0%
GAGTGAATTTATGGGGATGA+TGG + chr4.3:85134877-85134896 None:intergenic 40.0%
GATTCCCATTCTTGCATAAC+AGG + chr4.3:85139322-85139341 None:intergenic 40.0%
GCAGTTACTACGGATAAAGA+TGG - chr4.3:85140516-85140535 MS.gene034005:intron 40.0%
GCCTTGAAGAATTATCCAAC+TGG - chr4.3:85141220-85141239 MS.gene034005:intron 40.0%
GGGTGTAAGAAGAAAAATGG+TGG + chr4.3:85134901-85134920 None:intergenic 40.0%
GGTAAATCAACATACCACTG+TGG + chr4.3:85139179-85139198 None:intergenic 40.0%
GTAAACCATTGAAAATCCCG+TGG + chr4.3:85138105-85138124 None:intergenic 40.0%
GTTGAAATCCAGGGAAATCT+TGG - chr4.3:85136791-85136810 MS.gene034005:intron 40.0%
GTTGGCAGATAAACTCCTAT+AGG + chr4.3:85136476-85136495 None:intergenic 40.0%
TAACATTATGCAAGCACCTC+AGG + chr4.3:85140170-85140189 None:intergenic 40.0%
TCAGTGGAATTTGGAAGAGA+TGG - chr4.3:85138322-85138341 MS.gene034005:intron 40.0%
TCATAAAGCATACCTGAGCA+AGG + chr4.3:85137673-85137692 None:intergenic 40.0%
TCCAAACCTTGACAAAAGCA+TGG - chr4.3:85137876-85137895 MS.gene034005:intron 40.0%
TGATTCCTTTGTTACCTGCA+TGG + chr4.3:85140463-85140482 None:intergenic 40.0%
TGGTGCATCATAACATCGTA+AGG + chr4.3:85140279-85140298 None:intergenic 40.0%
TGTGTATGAACAACTCCCTT+AGG + chr4.3:85137641-85137660 None:intergenic 40.0%
TTACAAGCAACTCATCTCGT+CGG - chr4.3:85136310-85136329 MS.gene034005:intron 40.0%
TTCGTAGAGTCTCTATGACA+TGG + chr4.3:85140693-85140712 None:intergenic 40.0%
TTGAGAAGAAGAGAAGATGG+GGG + chr4.3:85134921-85134940 None:intergenic 40.0%
! AAAAGGTCAATTGGTTCCGT+TGG - chr4.3:85135971-85135990 MS.gene034005:CDS 40.0%
! AAACCTTGACAAAAGCATGG+GGG - chr4.3:85137879-85137898 MS.gene034005:intron 40.0%
! AAAGGTCAATTGGTTCCGTT+GGG - chr4.3:85135972-85135991 MS.gene034005:CDS 40.0%
! ACTATGTTTGGAGTTCACGT+GGG + chr4.3:85135815-85135834 None:intergenic 40.0%
! ACTGAAGGATCTAAAGCTGA+TGG - chr4.3:85138360-85138379 MS.gene034005:CDS 40.0%
! CAAACCTTGACAAAAGCATG+GGG - chr4.3:85137878-85137897 MS.gene034005:intron 40.0%
! CATTTATGGCGTTGAAATCC+AGG - chr4.3:85136781-85136800 MS.gene034005:intron 40.0%
! CCAAACCTTGACAAAAGCAT+GGG - chr4.3:85137877-85137896 MS.gene034005:intron 40.0%
! CGGGATTTTCAATGGTTTAC+TGG - chr4.3:85138105-85138124 MS.gene034005:CDS 40.0%
! GACAGACAGTTTGCAGATTT+TGG - chr4.3:85135621-85135640 MS.gene034005:intron 40.0%
! GTCTCAGAATGTTGCGTTTT+GGG - chr4.3:85141111-85141130 MS.gene034005:intron 40.0%
! TGATGCAGACAGTATTTTCC+CGG - chr4.3:85137440-85137459 MS.gene034005:intron 40.0%
! TGCGGTGATTTTTCTCTACA+GGG - chr4.3:85136021-85136040 MS.gene034005:intron 40.0%
! TGGGGGTGTAAGAAGAAAAA+TGG + chr4.3:85134904-85134923 None:intergenic 40.0%
! TGGTGGTGAGTGAATTTATG+GGG + chr4.3:85134884-85134903 None:intergenic 40.0%
! TGTCTCAGAATGTTGCGTTT+TGG - chr4.3:85141110-85141129 MS.gene034005:intron 40.0%
! TTTTCTCTACAGGGTCATCT+TGG - chr4.3:85136030-85136049 MS.gene034005:intron 40.0%
!! GAATTTATGGGGATGATGGA+AGG + chr4.3:85134873-85134892 None:intergenic 40.0%
!! GACGATGGATACTTTAAGAC+TGG - chr4.3:85140489-85140508 MS.gene034005:intron 40.0%
!! GCTCATATGTTTTATTGGGG+TGG - chr4.3:85135137-85135156 MS.gene034005:intron 40.0%
!! TCAGCTTTAGATCCTTCAGT+TGG + chr4.3:85138360-85138379 None:intergenic 40.0%
!!! ACACAACCCTCTCCTTTTTT+TGG - chr4.3:85140739-85140758 MS.gene034005:intron 40.0%
!!! CTTTTTTCTTCCCGTAGGTA+AGG + chr4.3:85137163-85137182 None:intergenic 40.0%
AAAACCATTTCCTGGTGTGC+AGG - chr4.3:85139587-85139606 MS.gene034005:CDS 45.0%
AACAAATTCGGCAGACGGTT+TGG + chr4.3:85136840-85136859 None:intergenic 45.0%
AATCTTGGTGGAGCTCGAAT+AGG - chr4.3:85136806-85136825 MS.gene034005:intron 45.0%
ACATAGAGGAGCTCTACTTC+TGG + chr4.3:85136923-85136942 None:intergenic 45.0%
ACCAACTCGACTAATCGTGT+GGG - chr4.3:85141472-85141491 MS.gene034005:intron 45.0%
ACCATCATATGGCCGATATG+CGG + chr4.3:85138541-85138560 None:intergenic 45.0%
AGGTTCCAACTATGTACACC+CGG - chr4.3:85138703-85138722 MS.gene034005:intron 45.0%
CAAGAATGGGAATCCATCAC+TGG - chr4.3:85139328-85139347 MS.gene034005:intron 45.0%
CAATAAGCGATGTCCAGTGA+TGG + chr4.3:85139344-85139363 None:intergenic 45.0%
CATCACTGGACATCGCTTAT+TGG - chr4.3:85139342-85139361 MS.gene034005:intron 45.0%
CATCGCTTATTGGAGCGATA+TGG - chr4.3:85139352-85139371 MS.gene034005:intron 45.0%
CATCTCAAGGACAACATCGT+AGG + chr4.3:85140631-85140650 None:intergenic 45.0%
CGTGAGTCATATCCAACTGA+AGG - chr4.3:85138345-85138364 MS.gene034005:intron 45.0%
CTACGATGTTGTCCTTGAGA+TGG - chr4.3:85140629-85140648 MS.gene034005:intron 45.0%
CTACGCAACTTCATCATTCG+GGG + chr4.3:85139989-85140008 None:intergenic 45.0%
CTCTATGACATGGACCTTGT+TGG + chr4.3:85140683-85140702 None:intergenic 45.0%
GAAATCCAGGGAAATCTTGG+TGG - chr4.3:85136794-85136813 MS.gene034005:intron 45.0%
GACAGTTGGATGCTGCAAAA+AGG + chr4.3:85141094-85141113 None:intergenic 45.0%
GACTGGAGATGCAGTTACTA+CGG - chr4.3:85140506-85140525 MS.gene034005:intron 45.0%
GAGAATGAAGAAACTGGAGC+TGG - chr4.3:85140095-85140114 MS.gene034005:intron 45.0%
GAGGAATTATTAGGAACGGG+CGG + chr4.3:85137381-85137400 None:intergenic 45.0%
GCGGATATAATCAAGAGTGG+TGG - chr4.3:85140928-85140947 MS.gene034005:intron 45.0%
GGCTTACCAGACAAAGACTA+CGG - chr4.3:85141132-85141151 MS.gene034005:intron 45.0%
GGGACAACAGGTAAACCTAA+GGG - chr4.3:85137623-85137642 MS.gene034005:intron 45.0%
GGTTCATTCTCACAAGACCT+TGG - chr4.3:85138446-85138465 MS.gene034005:intron 45.0%
GTGTCTCTACTTATGAGGCA+TGG - chr4.3:85135207-85135226 MS.gene034005:intron 45.0%
GTTTCCACAAACAGTCTCAG+CGG + chr4.3:85136506-85136525 None:intergenic 45.0%
TACCAACTCGACTAATCGTG+TGG - chr4.3:85141471-85141490 MS.gene034005:intron 45.0%
TATTAGGAACGGGCGGAATA+TGG + chr4.3:85137374-85137393 None:intergenic 45.0%
TCCATTACTGCTCTTCTCTG+AGG + chr4.3:85137400-85137419 None:intergenic 45.0%
TCCTCAGAGAAGAGCAGTAA+TGG - chr4.3:85137396-85137415 MS.gene034005:intron 45.0%
TGTGTTTACGGCGGCATATA+AGG + chr4.3:85141540-85141559 None:intergenic 45.0%
TTGCCGAAGTTTAGTGTCAG+TGG - chr4.3:85138306-85138325 MS.gene034005:intron 45.0%
TTGTATACTAGCGGGACAAC+AGG - chr4.3:85137611-85137630 MS.gene034005:intron 45.0%
TTGTGCGATTATCGTGCCAA+AGG - chr4.3:85141164-85141183 MS.gene034005:intron 45.0%
! ACCAGGAAATGGTTTTCCGA+CGG + chr4.3:85139583-85139602 None:intergenic 45.0%
! ATACCCCCATGCTTTTGTCA+AGG + chr4.3:85137885-85137904 None:intergenic 45.0%
! ATTTGGCTCAGGTGAAGATC+CGG - chr4.3:85137580-85137599 MS.gene034005:intron 45.0%
! CACTATGTTTGGAGTTCACG+TGG + chr4.3:85135816-85135835 None:intergenic 45.0%
! CATGTCCACGGGATTTTCAA+TGG - chr4.3:85138097-85138116 MS.gene034005:CDS 45.0%
! CCCATGCTTTTGTCAAGGTT+TGG + chr4.3:85137880-85137899 None:intergenic 45.0%
! CTGCGGTGATTTTTCTCTAC+AGG - chr4.3:85136020-85136039 MS.gene034005:intron 45.0%
! GGCTTTTCTGTATGCATGAC+AGG - chr4.3:85140046-85140065 MS.gene034005:intron 45.0%
! GGTGCTATAACCGTATTCAC+TGG - chr4.3:85138381-85138400 MS.gene034005:CDS 45.0%
! TTGGGGTGTCTCTACTTATG+AGG - chr4.3:85135202-85135221 MS.gene034005:intron 45.0%
!! ACGCAACATTCTGAGACAGT+TGG + chr4.3:85141108-85141127 None:intergenic 45.0%
!! GTACTTGCGACTTGGTTTAG+TGG - chr4.3:85136866-85136885 MS.gene034005:intron 45.0%
!!! GCCAACTTTTTTCTTCCCGT+AGG + chr4.3:85137168-85137187 None:intergenic 45.0%
!!! TTTTGTTTAATTAAAAAAAA+TGG - chr4.3:85135085-85135104 MS.gene034005:intron 5.0%
AAGCAAGAAGCTGCAGCTCA+TGG - chr4.3:85136251-85136270 MS.gene034005:intron 50.0%
ACCGCATATCGGCCATATGA+TGG - chr4.3:85138537-85138556 MS.gene034005:intron 50.0%
ACCGTCGGAAAACCATTTCC+TGG - chr4.3:85139579-85139598 MS.gene034005:CDS 50.0%
AGTCTCAGCGGTGCTTATGT+TGG + chr4.3:85136494-85136513 None:intergenic 50.0%
CCAGCAACAAATTCGGCAGA+CGG + chr4.3:85136845-85136864 None:intergenic 50.0%
CGCAAGGAACTTGCGTCTAA+TGG - chr4.3:85138782-85138801 MS.gene034005:intron 50.0%
CGGGACAACAGGTAAACCTA+AGG - chr4.3:85137622-85137641 MS.gene034005:intron 50.0%
CTAACCTGCACACCAGGAAA+TGG + chr4.3:85139594-85139613 None:intergenic 50.0%
GATGGAAGGGAGGTAGAAGA+GGG + chr4.3:85134859-85134878 None:intergenic 50.0%
TCTGGATAGCTGAGTGCAAG+TGG + chr4.3:85136905-85136924 None:intergenic 50.0%
TGATGGAAGGGAGGTAGAAG+AGG + chr4.3:85134860-85134879 None:intergenic 50.0%
! AACAGGTTGAGGAAGTGCAG+AGG + chr4.3:85139305-85139324 None:intergenic 50.0%
! TCCCACACGATTAGTCGAGT+TGG + chr4.3:85141476-85141495 None:intergenic 50.0%
! TTGCTGGAGTACTTGCGACT+TGG - chr4.3:85136858-85136877 MS.gene034005:intron 50.0%
!! ACACAGAAGCATCCTTGCTC+AGG - chr4.3:85137658-85137677 MS.gene034005:intron 50.0%
!! CTTGCGACTTGGTTTAGTGG+AGG - chr4.3:85136869-85136888 MS.gene034005:intron 50.0%
!! TTATGGGGATGATGGAAGGG+AGG + chr4.3:85134869-85134888 None:intergenic 50.0%
ACCTTCCCCATTGCATTGCG+AGG + chr4.3:85141506-85141525 None:intergenic 55.0%
ACGCTCCCTCGCAATGCAAT+GGG - chr4.3:85141497-85141516 MS.gene034005:intron 55.0%
AGCACCGCTGAGACTGTTTG+TGG - chr4.3:85136499-85136518 MS.gene034005:intron 55.0%
CCTTCCCCATTGCATTGCGA+GGG + chr4.3:85141505-85141524 None:intergenic 55.0%
CTGCAAGCCACTTCAGCATC+TGG - chr4.3:85138759-85138778 MS.gene034005:intron 55.0%
GAGCTCCACCAAGATTTCCC+TGG + chr4.3:85136802-85136821 None:intergenic 55.0%
GCTCAACTAACCTGCACACC+AGG + chr4.3:85139600-85139619 None:intergenic 55.0%
GCTTTGCGCTCGCCATTCAA+TGG + chr4.3:85139555-85139574 None:intergenic 55.0%
TTATCCAAGCAGGGCCACAG+TGG - chr4.3:85139162-85139181 MS.gene034005:CDS 55.0%
TTGAATGGCGAGCGCAAAGC+AGG - chr4.3:85139555-85139574 MS.gene034005:CDS 55.0%
!! CCGTCTGCCGAATTTGTTGC+TGG - chr4.3:85136842-85136861 MS.gene034005:intron 55.0%
ACCGTGGAACCTGCGTAGAG+AGG + chr4.3:85138133-85138152 None:intergenic 60.0%
CATACCACTGTGGCCCTGCT+TGG + chr4.3:85139169-85139188 None:intergenic 60.0%
CCACTTCAGCATCTGGCGCA+AGG - chr4.3:85138766-85138785 MS.gene034005:intron 60.0%
CCCTCGCAATGCAATGGGGA+AGG - chr4.3:85141502-85141521 MS.gene034005:intron 60.0%
CCCTCTCTACGCAGGTTCCA+CGG - chr4.3:85138129-85138148 MS.gene034005:CDS 60.0%
CCGTGGAACCTGCGTAGAGA+GGG + chr4.3:85138132-85138151 None:intergenic 60.0%
CCTTGCGCCAGATGCTGAAG+TGG + chr4.3:85138769-85138788 None:intergenic 60.0%
CGCTCCCTCGCAATGCAATG+GGG - chr4.3:85141498-85141517 MS.gene034005:intron 60.0%
CGTGGAACCTGCGTAGAGAG+GGG + chr4.3:85138131-85138150 None:intergenic 60.0%
GACGCTCCCTCGCAATGCAA+TGG - chr4.3:85141496-85141515 MS.gene034005:intron 60.0%
TTACTGGCCCCTCTCTACGC+AGG - chr4.3:85138121-85138140 MS.gene034005:CDS 60.0%
! GCTGAAGTGGCTTGCAGCTC+AGG + chr4.3:85138756-85138775 None:intergenic 60.0%
! GAGCGCAAAGCAGGCACCGT+CGG - chr4.3:85139564-85139583 MS.gene034005:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 85134821 85141680 85134821 ID=MS.gene034005
chr4.3 mRNA 85134821 85141680 85134821 ID=MS.gene034005.t1;Parent=MS.gene034005
chr4.3 exon 85141539 85141680 85141539 ID=MS.gene034005.t1.exon1;Parent=MS.gene034005.t1
chr4.3 CDS 85141539 85141680 85141539 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85140128 85140294 85140128 ID=MS.gene034005.t1.exon2;Parent=MS.gene034005.t1
chr4.3 CDS 85140128 85140294 85140128 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85139546 85139698 85139546 ID=MS.gene034005.t1.exon3;Parent=MS.gene034005.t1
chr4.3 CDS 85139546 85139698 85139546 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85139021 85139210 85139021 ID=MS.gene034005.t1.exon4;Parent=MS.gene034005.t1
chr4.3 CDS 85139021 85139210 85139021 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85138822 85138910 85138822 ID=MS.gene034005.t1.exon5;Parent=MS.gene034005.t1
chr4.3 CDS 85138822 85138910 85138822 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85138545 85138626 85138545 ID=MS.gene034005.t1.exon6;Parent=MS.gene034005.t1
chr4.3 CDS 85138545 85138626 85138545 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85138351 85138406 85138351 ID=MS.gene034005.t1.exon7;Parent=MS.gene034005.t1
chr4.3 CDS 85138351 85138406 85138351 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85138097 85138204 85138097 ID=MS.gene034005.t1.exon8;Parent=MS.gene034005.t1
chr4.3 CDS 85138097 85138204 85138097 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85137698 85137796 85137698 ID=MS.gene034005.t1.exon9;Parent=MS.gene034005.t1
chr4.3 CDS 85137698 85137796 85137698 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85137117 85137209 85137117 ID=MS.gene034005.t1.exon10;Parent=MS.gene034005.t1
chr4.3 CDS 85137117 85137209 85137117 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85136893 85136970 85136893 ID=MS.gene034005.t1.exon11;Parent=MS.gene034005.t1
chr4.3 CDS 85136893 85136970 85136893 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85136329 85136433 85136329 ID=MS.gene034005.t1.exon12;Parent=MS.gene034005.t1
chr4.3 CDS 85136329 85136433 85136329 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85135943 85136033 85135943 ID=MS.gene034005.t1.exon13;Parent=MS.gene034005.t1
chr4.3 CDS 85135943 85136033 85135943 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85135508 85135581 85135508 ID=MS.gene034005.t1.exon14;Parent=MS.gene034005.t1
chr4.3 CDS 85135508 85135581 85135508 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85135232 85135399 85135232 ID=MS.gene034005.t1.exon15;Parent=MS.gene034005.t1
chr4.3 CDS 85135232 85135399 85135232 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85134978 85135031 85134978 ID=MS.gene034005.t1.exon16;Parent=MS.gene034005.t1
chr4.3 CDS 85134978 85135031 85134978 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
chr4.3 exon 85134821 85134865 85134821 ID=MS.gene034005.t1.exon17;Parent=MS.gene034005.t1
chr4.3 CDS 85134821 85134865 85134821 ID=cds.MS.gene034005.t1;Parent=MS.gene034005.t1
Gene Sequence

>MS.gene034005

ATGAGTTCCTCATTTAAGACTCTCAACAAACAATTCCCTCTTCTACCTCCCTTCCATCATCCCCATAAATTCACTCACCACCATTTTTCTTCTTACACCCCCATCTTCTCTTCTTCTCAATTTCGTTCATCATCTTGCTCAAGTAAGTTTTCTCTTTCTTTCTCTCTCTTGTTTTTGTTACTTACAATGGAAATTTCGTTTTGTACTTTTGTTGATTGAGTCAGTGTGCATGTCTGTGTCTGTGTATGTACGTGCCTTGTCCTGTTTTGTTTAATTAAAAAAAATGGATTTTTTTTTACTATGGTCAGTGATTTTTGCTCATATGTTTTATTGGGGTGGTGAATTTTTTTATCTTGGCGTTGAATTTGATTTAATATGTTGTTGGGGTGTCTCTACTTATGAGGCATGGACACTGAGAATGTAATAATATGAGAAAATGACATAATTGAATGTAATAATCACACGTGTCAGTATCGTGTTAGACATCAGACATGTCTTCAATTAGAAGTGTTGGTGCTACGGAAGTGTCAACTATCTCATGCATGATTAATAATGGCTGCATGTTTTGGAGTAAACTCCAAAATAGTGTTTGAAATTGTAAGGTTGAGAAAATTAAAGTTATTTTAAAAAAAAAGTTCATGGGAATTGGAAATTGTGGGTCATTTTAGTTCAGATGATACCATATGTTAGTGTACTTTTCAAATTAGTCCATGAAATTGAATACTTAATATCAAATTTGTTATTGAAATTTTAATTATGAATGTTAAATTATTCTTATAAGTGTTGGTATGGATTAAGATGACAGACAGTTTGCAGATTTTGGGACTGTGTTTTTGTAATTTCTCTTATTTTGGGACTAGCCTAACAATGCCATGCAATTTCAGAAGCTGAATTGGGATTTACTAAGAGGGTTCCTTTCTTCTAATGGTTGTTGAAAAATTATCATTTTTATCATTATCTAGCTTATAATTAACAGATTTGGGGTTCTAAACCCACGTGAACTCCAAACATAGTGCTTATTGTTCAAAGCTGAGTTGTTTGGAACACTTATTTGTACATGCAACATTGATAATTAGTGCTCTGGCTATTGTTTTATGCACCTTAGATTTCAACTTTCAACATTTCAGAACCTAGGACAATTAAGAGCGTAAAAAGGTCAATTGGTTCCGTTGGGTTGAACATTAACTAAATAAATGTATCTGCGGTGATTTTTCTCTACAGGGTCATCTTGGTTTCGAACAGTTATCAGTTTATTGAGTAGTAGTCCCTTGAGTAAAATACCAAATAGATATCTTCTTGTTCAGGCTTTATATATGGTTTTGTATTGTATTGTATCTAATGAATTCATATGTAAGGTTATTTGATTGTGTTCTTCCTATTATATAGTATCTCAATCTACAACATATATGGAGGTCTTCAAAGCAATTGCTAAGCAAGAAGCTGCAGCTCATGGTAGTGTTGCTATCAGAGCTGATCAGCAGAGTTATAGTTACAAGCAACTCATCTCGTCGGCACAGAAGATATCTAATCTCTTGTGTGGAAATGATGTGAAGGTAGCAAATTACACCTTGACATTCCTTTACTATTCTCTTTGTAAGATTAAGTTGCGTACACTATTTGTTATCATTTGACCAATATGATATACGGAAGTTCCTATAGGAGTTTATCTGCCAACATAAGCACCGCTGAGACTGTTTGTGGAAACAGCTTAGGACATGTCTATAAACTGTTTTTTAGCTTATTTTCATAAGTTCTCTAGGATAGGTTATATGAAAACATTTTGATTCTTTTTTTACCTTTTATTATGGAAATAGCAAAAATAAAACCCACATTTATATAAAGTTATTCTATTTTTATCAATCTGCTAGTAATTGAATGCTTAGTCTATTGCTGGGCATTTGTAGCTATGTGAGTGCTGTACTACATTCTTGCTTATGTACAAAAGATTTGTTTAGTCAATCATTTATGGCGTTGAAATCCAGGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCGTCTGCCGAATTTGTTGCTGGAGTACTTGCGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAAGTAGAGCTCCTCTATGTGATGAATAATTCGGTATGCTTTGGAAACACTCACTTTTCTTATATAGTTCTTTTGTTTGTTTAACGTTTAGCTTGTGAACATTAAGAACTAAGGACTCTTAATTTTCCATTGACATTATCTTGGTACCTTTTATATGAAATTTTCAAATAGCTGGTTTATCTGTAGATTTTTTCCTTTGTGAAAAGTATATATGATGTAAATATGCTTCAAAAATAACCTTACCTACGGGAAGAAAAAAGTTGGCTATATGTTGCCAACAAATTAGTTGGACTATTTATTTATGCTACGTTACCTTTATGCTTTAATTATGCTTTTTGGATTGAATCTTAATAAAAATTTGATTATAGGACGTGTCTGCAATACTGAGTACTGAAGATCATAGTGAACTAATGCAAAGCATTGCCAATAAAACCTCATCTCAATTTTTCCATATTCCGCCCGTTCCTAATAATTCCTCAGAGAAGAGCAGTAATGGACATTCACAAAATGGGGAAATTGATGCAGACAGTATTTTCCCGGAAAACATTGAAAGATCAAGTAAGAATATCACATTTTCAGCTTCTAAAAATGGACAAAGTAGAATACTATCTTGGTAGAAATTTTCTGAGTTTTTTCTTGTCTTTTGTTTTTCGTATCATTTGGCTCAGGTGAAGATCCGGCACTGATTTTGTATACTAGCGGGACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTATGCTTTATGATTTATTTTGAGTTACTCTGAAAAAGCTAGTTCTATTATTTTGTAAGTTACTTTGTTATGTTAATATTCAAATCACACAAATACTTATGTTTCTTACTTAATTTTAATCATAATTCACTTTAATACTTGTTATTCTCTTTCACTAATTTTTTTTTTTTTTTTTATAATTTTTCTTGATTTTAGGTCCAAACCTTGACAAAAGCATGGGGGTATACGTCTGCTGATCAGTTTTTGCACTGTCTACCACTACATCATATCCATGAAAGTTTTTTTATATGCATTATTCAATACTTTTGTAGTTAGAATTTAGAAAGATTTTTTTTTTTTTTTATCATATTTAGTATATTTGCTCAAGATATGATTTGCGATATCTTTGTGATGTCTATCCTTAACATATATGAAGTACATGTCCACGGGATTTTCAATGGTTTACTGGCCCCTCTCTACGCAGGTTCCACGGTAATTTTCTTTTTCCTTTTCACTTCTTACATAGCAAATACAACCAGAAAAGAAAATATCAATTTTCGTACAAGTGACCTCAAAATAGTATCCATTTTGAACATATAAGTTTTTGTTGTTGCTGAGAATCTAATGTCTTGTTCAAGGTTGAATTTTTGCCGAAGTTTAGTGTCAGTGGAATTTGGAAGAGATGGCGTGAGTCATATCCAACTGAAGGATCTAAAGCTGATGGTGCTATAACCGTATTCACTGGAGTAAGTATGATTATTATGAGCATTGAGAAGATCTATGATATGGTTCATTCTCACAAGACCTTGGTTTTTTGTATATAATCTTTTGCCTGCCTGAAAATAAATTATCTTTCCCTGGAGTATAATCATACGAAGACCGCATATCGGCCATATGATGGTGTTCTTTGTTGTTCTTGAAAACTTAGTAATCAGAGTTTCGCATTCAGTCTTATGTATACACCATTTACAACGAACTGTAATTTCTATGATTGTAAAACATGTTTTCGGTGACATCATTTTGATCTAAATAATTTTTTAATGAAGGTTCCAACTATGTACACCCGGTTAATACAAGGTTATCGTGCTATGGATCCTGAGCTGCAAGCCACTTCAGCATCTGGCGCAAGGAACTTGCGTCTAATGGTTAGTGACTGTTATATCCTTCAAACATTTTAATCTTTGGAAAGAAGATAAATGGATATCTTTTCGAACTTCAGAAGATGAAGATTGTTCGTTTTTTTCTTCTAATTTGACTTAATCAATGTTTCTTTTAGGGATTGTTTAGATTGGATTATTTGAGCCTATGGAAATAGCTTATGACATGTCCATATGCTGTTTTCAGCTTATTTCCATAAGCTCTTCAAAGATAGCTTATGAAAACAACTTATAACTTGCATGAAAATAGTTTGACTTTATTATTATTATTTTTTCTATATAGAAATAGCTTATACATAAGCACTTATATGATAAACACTTATGCTAAAATGTATAACTAAGTTGTTTATCCAAGCAGGGCCACAGTGGTATGTTGATTTACCATGCATGGTTCACTTGCAATTTATTTATGTTAATGTGCGATGACTACCATTCTCAATCTCAAAAATCTGATATATTACCATTCTATTACTCAGATGTGTGGATCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGATATGGCATGACTGAAGTAAGTAAACTTCATGTTATATTCTTCAACTTCTTAGTAAATCATTTTAGCTGAAGTTCTTCGACTTGTACAGAATCATATACACAATTTTCATTAATATCGTACTGAATTTTTAGAACCTTACATTATTGTATCGATGTTTCTAGTTTGTCATGGCATTGTCAAATCCATTGAATGGCGAGCGCAAAGCAGGCACCGTCGGAAAACCATTTCCTGGTGTGCAGGTTAGTTGAGCTTTGCACTTTTCCATTTGCTTCTAATCACAGAAAATGGACTTTTTGATCTCTCATTCTACTGCTGTGTGATCTATTTATGCTCATATTAAGTGCTATGTTTGAAATATTTCTCTCATTATTTTTCCACTAATATACCCTTTTTTATTGTATCTCCACGAATACTCCACTAACTATTACTTGAAAGGATACTTTAGTAATTAAAGCTCATTTTATAAAAAGAAATTAGTATACTCAACAGTTTTCTTTAGAGCTGTGCAGAACCTTGAACAACACTTAATATGAGACAGAAGTAGACCATTGAATAAAGTAATATATGACTGAAACTTTAAAAATGCATGTGAAATATCAATGATTTTTACTAAGAACCCCGAATGATGAAGTTGCGTAGTGTTATTAATGCTCAATGTGAAAGATGGTGATATCTTGGCTTTTCTGTATGCATGACAGGTCAAGATTCTTGCAGATGAAGAGCATGAGAATGAAGAAACTGGAGCTGGTGAGCTTTGCGTTAAAAGCCCTTCATCGTTTAAAGAATATTGGAAACTTCCTGAGGTGCTTGCATAATGTTAATTTCAGACATTTATTGATTCTGAAATCATTATTTAGTGATAACTGTTGCTTTTTCTTTCGATCTTTTTGAGTACTACAAACAATTCCTTACGATGTTATGATGCACCATTACAATCATAACATCGCACATTATTTTAGTTACTTGAGGACATAATTTGTTCTAAGGATAGAAATACTATATCAATTTCAGTTACAGACAGTCCAAGATTCTAAGGATAGAAAACGGTAAAAGAAATGTAATATCTGCGTCTAATAAATTTGTATTTTTTCCATGCAGGTAACAAAGGAATCATTTACAGACGATGGATACTTTAAGACTGGAGATGCAGTTACTACGGATAAAGATGGATATTTCATCATTTTAGGACGTAAGGAAATTTATTTCTCTAAGTATGATGTGTGGTTCTCATGCGTAGTTATGTAACCAAATTTGAATTCCTACGATGTTGTCCTTGAGATGGATCTTTTCATTTTTCCAAAATGAATCTTCCAACAAGGTCCATGTCATAGAGACTCTACGAAGTTTCACATTGGCTGTTGACTGCCTAACACAACCCTCTCCTTTTTTTGGTGAAACACAACCCTCTCCTTATATACCAGCAAATTGCTAATAACTAAGACATGTCGTTTCGTCTAAATAATTTACAACCTTATTGGCAACAAAATAGTAGAAGTTAGATTGTGATGGTAGTAAAACCTACTGAGTAAATGTTTTCTACTTTTTATCAGGTACTAATGCGGATATAATCAAGAGTGGTGGCTATAAGCTTTCTGCATTAGAAATTGAATCAGTAATATTAGAGGCAAGTGGCTACGATTTTCTCATCCCATGATTGTTAGTTTTTGTTAACGAACCCTTATATAGTTGTACAGTTTATGATATGATATTCACAATCAGTACCTTTTTGCAGCATCCAACTGTCTCAGAATGTTGCGTTTTGGGCTTACCAGACAAAGACTACGGAGAAATTGTTTGTGCGATTATCGTGCCAAAGGAGAAGCAAGATAAAGAGTCAAAACCTCCTCTAAGCCTTGAAGAATTATCCAACTGGGCCAAGAATAAACTTGCACCTTACAAGGTATGGTTGAATGGCCATTCTTAGCACAAGAAGTACATGTAGCGTCTGTGTTTTACGATCCACAATTGACAACATTGATTTTTTTTATGCTATTTCTATATTTCATCAATTGTATTTCCTTGATACATCACAATTATCATAGACTACTTACAAGAGTTTCAAAAGTAAATTTTTCTAATTTTTTTATATATCTTTGTTAGATACCAACTCGACTAATCGTGTGGGAGACGCTCCCTCGCAATGCAATGGGGAAGGTAATTTACTTTTCCTTATATGCCGCCGTAAACACAAATCATTCTCCTTGTCATTTCATTGCAAAATATTATTTAGAAAGGAAAGATAATTGTTCTTTGTTTGAAATTTCAGGTAAATAAAAAAGAACTGAAGAAGCTGGTGCCTTCAGAACAGTAA
Protein sequence

>MS.gene034005.t1

MSSSFKTLNKQFPLLPPFHHPHKFTHHHFSSYTPIFSSSQFRSSSCSISQSTTYMEVFKAIAKQEAAAHGSVAIRADQQSYSYKQLISSAQKISNLLCGNDVKGNLGGARIGIVAKPSAEFVAGVLATWFSGGVAVPLALSYPEVELLYVMNNSDVSAILSTEDHSELMQSIANKTSSQFFHIPPVPNNSSEKSSNGHSQNGEIDADSIFPENIERSSEDPALILYTSGTTGKPKGVVHTHRSILAQVQTLTKAWGYTSADQFLHCLPLHHIHEIHVHGIFNGLLAPLYAGSTVEFLPKFSVSGIWKRWRESYPTEGSKADGAITVFTGVPTMYTRLIQGYRAMDPELQATSASGARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMALSNPLNGERKAGTVGKPFPGVQVKILADEEHENEETGAGELCVKSPSSFKEYWKLPEVTKESFTDDGYFKTGDAVTTDKDGYFIILGRTNADIIKSGGYKLSALEIESVILEHPTVSECCVLGLPDKDYGEIVCAIIVPKEKQDKESKPPLSLEELSNWAKNKLAPYKIPTRLIVWETLPRNAMGKVNKKELKKLVPSEQ