AlfalfaGEDB | MS.gene009614

M. sativa cultivar XinJiangDaYe / MS.gene009614

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009614.t1	XP_003616111.1	97.9	562	11	1	1	561	1	562	0.00E+00	1118.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009614.t1	Q9FFE6	64.9	553	187	5	1	551	1	548	2.8e-214	746.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009614.t1	G7K5Y8	97.9	562	11	1	1	561	1	562	0.0e+00	1118.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene009614	MS.gene61755	PPI
MS.gene052937	MS.gene009614	PPI
MS.gene009614	MS.gene070122	PPI
MS.gene049797	MS.gene009614	PPI
MS.gene009614	MS.gene95914	PPI
MS.gene009614	MS.gene024712	PPI
MS.gene009614	MS.gene070120	PPI
MS.gene009614	MS.gene21689	PPI
MS.gene009614	MS.gene66371	PPI
MS.gene009614	MS.gene034005	PPI
MS.gene009614	MS.gene05028	PPI
MS.gene009614	MS.gene016573	PPI
MS.gene009614	MS.gene88556	PPI
MS.gene007715	MS.gene009614	PPI
MS.gene037817	MS.gene009614	PPI
MS.gene009614	MS.gene24887	PPI
MS.gene009614	MS.gene049681	PPI
MS.gene009614	MS.gene008350	PPI
MS.gene049799	MS.gene009614	PPI
MS.gene72869	MS.gene009614	PPI
MS.gene009614	MS.gene030325	PPI
MS.gene009614	MS.gene96127	PPI
MS.gene017552	MS.gene009614	PPI
MS.gene009614	MS.gene026245	PPI
MS.gene009614	MS.gene72868	PPI
MS.gene009614	MS.gene79523	PPI
MS.gene009614	MS.gene26216	PPI
MS.gene009614	MS.gene27109	PPI
MS.gene028660	MS.gene009614	PPI
MS.gene009614	MS.gene031746	PPI
MS.gene009614	MS.gene88935	PPI
MS.gene009614	MS.gene028035	PPI
MS.gene017545	MS.gene009614	PPI
MS.gene009614	MS.gene21937	PPI
MS.gene006564	MS.gene009614	PPI
MS.gene009614	MS.gene27213	PPI
MS.gene009614	MS.gene09153	PPI
MS.gene009614	MS.gene22277	PPI
MS.gene009614	MS.gene43857	PPI
MS.gene009614	MS.gene067380	PPI
MS.gene009614	MS.gene09104	PPI
MS.gene009614	MS.gene23788	PPI
MS.gene037815	MS.gene009614	PPI
MS.gene041844	MS.gene009614	PPI
MS.gene009614	MS.gene21691	PPI
MS.gene009614	MS.gene61077	PPI
MS.gene067382	MS.gene009614	PPI
MS.gene009614	MS.gene23786	PPI
MS.gene009614	MS.gene028034	PPI
MS.gene009614	MS.gene067378	PPI
MS.gene009614	MS.gene31229	PPI
MS.gene009614	MS.gene026237	PPI
MS.gene009614	MS.gene028032	PPI
MS.gene009614	MS.gene09107	PPI
MS.gene009614	MS.gene068274	PPI
MS.gene009614	MS.gene88987	PPI
MS.gene009614	MS.gene34290	PPI
MS.gene009614	MS.gene061174	PPI
MS.gene009614	MS.gene88460	PPI
MS.gene000812	MS.gene009614	PPI
MS.gene009614	MS.gene037813	PPI
MS.gene009614	MS.gene27218	PPI
MS.gene33407	MS.gene009614	PPI
MS.gene025344	MS.gene009614	PPI
MS.gene009614	MS.gene23782	PPI
MS.gene009614	MS.gene017279	PPI
MS.gene009614	MS.gene75039	PPI
MS.gene009614	MS.gene24088	PPI
MS.gene065895	MS.gene009614	PPI
MS.gene009614	MS.gene017547	PPI
MS.gene009614	MS.gene034275	PPI
MS.gene72872	MS.gene009614	PPI
MS.gene09098	MS.gene009614	PPI
MS.gene009614	MS.gene98148	PPI
MS.gene009614	MS.gene061578	PPI
MS.gene009614	MS.gene024710	PPI
MS.gene009614	MS.gene99857	PPI
MS.gene049798	MS.gene009614	PPI
MS.gene009614	MS.gene041843	PPI
MS.gene061175	MS.gene009614	PPI
MS.gene009614	MS.gene96431	PPI
MS.gene009614	MS.gene33339	PPI
MS.gene009614	MS.gene83513	PPI
MS.gene009614	MS.gene049797	PPI
MS.gene009614	MS.gene99100	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009614.t1	MTR_5g076240	97.865	562	11	1	1	561	1	562	0.0	1140
MS.gene009614.t1	MTR_5g076220	66.667	549	182	1	1	548	1	549	0.0	782
MS.gene009614.t1	MTR_5g076200	65.154	551	191	1	1	550	1	551	0.0	767
MS.gene009614.t1	MTR_0161s0050	64.791	551	191	2	1	548	1	551	0.0	738
MS.gene009614.t1	MTR_5g008800	53.370	549	240	7	8	552	8	544	0.0	589
MS.gene009614.t1	MTR_8g074040	50.361	554	261	6	1	550	43	586	0.0	583
MS.gene009614.t1	MTR_3g064420	52.931	563	235	8	1	545	1	551	0.0	581
MS.gene009614.t1	MTR_5g008820	50.640	547	256	6	8	552	8	542	0.0	563
MS.gene009614.t1	MTR_4g121600	48.485	561	274	7	1	551	7	562	0.0	548
MS.gene009614.t1	MTR_2g044180	47.842	556	279	6	1	548	7	559	0.0	541
MS.gene009614.t1	MTR_8g074120	50.410	488	228	6	67	550	20	497	3.58e-175	505
MS.gene009614.t1	MTR_8g074040	50.418	478	223	6	77	550	1	468	1.12e-173	500
MS.gene009614.t1	MTR_2g044180	47.346	471	237	6	86	548	1	468	3.51e-153	447
MS.gene009614.t1	MTR_5g023730	41.516	554	304	11	2	548	4	544	4.85e-146	432
MS.gene009614.t1	MTR_0803s0020	31.238	541	330	14	28	553	249	762	5.20e-61	218
MS.gene009614.t1	MTR_2g105570	28.902	519	324	16	39	541	53	542	7.15e-51	183
MS.gene009614.t1	MTR_4g128337	29.720	535	317	18	27	542	44	538	6.38e-46	170
MS.gene009614.t1	MTR_4g077900	29.307	505	308	14	52	541	1	471	1.72e-45	167
MS.gene009614.t1	MTR_1569s0010	28.200	539	342	15	28	541	10	528	1.64e-44	166
MS.gene009614.t1	MTR_5g027500	27.573	515	314	17	52	541	81	561	4.15e-42	159
MS.gene009614.t1	MTR_5g027480	29.008	524	311	18	38	541	66	548	1.14e-41	158
MS.gene009614.t1	MTR_2g095510	26.740	546	334	17	14	537	27	528	4.12e-41	156
MS.gene009614.t1	MTR_4g005750	27.684	531	335	14	27	541	38	535	4.54e-41	156
MS.gene009614.t1	MTR_3g460770	27.561	537	330	18	41	560	57	551	6.73e-41	155
MS.gene009614.t1	MTR_3g035130	27.853	517	324	18	40	546	32	509	1.21e-37	146
MS.gene009614.t1	MTR_1g026310	26.136	528	328	13	40	544	68	556	1.95e-37	146
MS.gene009614.t1	MTR_5g007640	26.374	546	322	21	27	542	82	577	3.47e-37	145
MS.gene009614.t1	MTR_2g030240	26.630	552	358	14	20	542	8	541	2.29e-36	143
MS.gene009614.t1	MTR_1g090737	27.553	519	317	16	36	537	79	555	2.30e-36	143
MS.gene009614.t1	MTR_4g057730	25.760	559	348	17	4	537	15	531	9.92e-36	141
MS.gene009614.t1	MTR_8g039720	25.947	528	331	15	40	544	65	555	3.52e-35	139
MS.gene009614.t1	MTR_1g063120	26.435	575	358	15	6	561	23	551	1.34e-34	137
MS.gene009614.t1	MTR_1g063110	25.350	572	342	17	7	537	10	537	2.02e-33	134
MS.gene009614.t1	MTR_3g088880	28.533	375	240	9	185	548	199	556	1.58e-32	132
MS.gene009614.t1	MTR_3g088870	29.134	381	235	11	184	548	197	558	2.47e-32	131
MS.gene009614.t1	MTR_2g030240	27.594	424	278	11	146	542	26	447	2.32e-31	127
MS.gene009614.t1	MTR_1g073180	25.581	516	326	13	40	543	61	530	2.20e-30	125
MS.gene009614.t1	MTR_2g095510	26.386	451	274	15	14	444	27	439	3.35e-29	120
MS.gene009614.t1	MTR_7g084850	25.091	550	341	18	37	544	200	720	5.73e-29	122
MS.gene009614.t1	MTR_4g057730	25.714	490	309	15	4	472	15	470	2.00e-28	119
MS.gene009614.t1	MTR_3g035130	26.362	459	299	13	40	489	32	460	5.40e-28	117
MS.gene009614.t1	MTR_1054s0020	25.185	540	332	18	33	547	279	771	1.22e-27	118
MS.gene009614.t1	MTR_1586s0010	25.616	406	270	10	7	397	33	421	1.51e-27	115
MS.gene009614.t1	MTR_4g011790	28.148	405	239	17	173	543	208	594	7.95e-27	115
MS.gene009614.t1	MTR_4g013210	28.535	396	231	14	182	543	64	441	3.51e-26	112
MS.gene009614.t1	MTR_4g011790	28.109	402	237	17	173	540	208	591	4.37e-26	113
MS.gene009614.t1	MTR_4g011790	27.404	416	237	17	173	543	208	603	2.76e-25	110
MS.gene009614.t1	MTR_1g073180	24.194	496	319	12	40	524	83	532	2.00e-24	107
MS.gene009614.t1	MTR_4g057730	25.325	462	290	15	4	444	15	442	4.07e-23	102
MS.gene009614.t1	MTR_4g013210	27.778	378	216	14	182	543	64	400	1.00e-21	98.2
MS.gene009614.t1	MTR_4g013210	27.968	379	214	16	182	543	216	552	1.91e-21	98.6
MS.gene009614.t1	MTR_4g013210	28.108	370	214	14	182	517	216	567	5.39e-19	90.9
MS.gene009614.t1	MTR_7g109830	24.074	486	298	14	41	471	78	547	1.97e-17	86.3
MS.gene009614.t1	MTR_1g026470	25.879	313	202	8	40	338	68	364	2.41e-16	81.6
MS.gene009614.t1	MTR_1g026430	25.559	313	203	8	40	338	68	364	1.44e-15	79.3
MS.gene009614.t1	MTR_3g087980	49.398	83	36	3	391	467	500	582	2.15e-13	73.6
MS.gene009614.t1	MTR_1g030290	33.516	182	95	9	298	467	417	584	1.65e-12	70.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009614.t1	AT5G16370	64.919	553	187	5	1	551	1	548	0.0	765
MS.gene009614.t1	AT5G16340	64.610	551	186	6	1	548	1	545	0.0	756
MS.gene009614.t1	AT1G75960	62.000	550	200	6	1	547	1	544	0.0	711
MS.gene009614.t1	AT1G21540	60.507	552	210	6	1	547	1	549	0.0	701
MS.gene009614.t1	AT1G21530	60.108	554	208	9	1	547	1	548	0.0	690
MS.gene009614.t1	AT1G77240	60.436	551	207	7	1	547	1	544	0.0	688
MS.gene009614.t1	AT1G21530	60.108	554	206	10	1	547	1	546	0.0	684
MS.gene009614.t1	AT1G20560	49.640	556	268	6	1	552	3	550	0.0	563
MS.gene009614.t1	AT2G17650	51.429	560	258	7	1	550	48	603	0.0	558
MS.gene009614.t1	AT1G65890	49.826	574	268	6	1	561	1	567	0.0	555
MS.gene009614.t1	AT3G16910	49.378	563	269	7	1	552	9	566	0.0	553
MS.gene009614.t1	AT1G66120	50.265	565	260	8	1	554	1	555	0.0	550
MS.gene009614.t1	AT1G65880	49.556	563	261	8	1	547	1	556	0.0	542
MS.gene009614.t1	AT1G20560	50.000	480	228	6	77	552	1	472	6.82e-167	483
MS.gene009614.t1	AT1G68270	44.086	558	268	7	1	547	1	525	7.15e-157	459
MS.gene009614.t1	AT1G76290	42.602	561	300	8	1	555	1	545	4.93e-155	455
MS.gene009614.t1	AT3G21240	28.488	516	325	14	39	541	63	547	5.97e-48	176
MS.gene009614.t1	AT3G21230	28.462	520	324	16	39	541	73	561	4.25e-44	165
MS.gene009614.t1	AT4G05160	28.154	547	324	17	17	537	30	533	1.50e-40	155
MS.gene009614.t1	AT1G20500	27.600	500	311	15	59	544	84	546	2.74e-40	154
MS.gene009614.t1	AT1G20510	27.151	523	323	16	40	544	58	540	2.06e-39	151
MS.gene009614.t1	AT3G21230	27.699	491	307	16	39	512	73	532	1.20e-37	146
MS.gene009614.t1	AT3G21240	27.455	448	285	12	39	473	63	483	4.37e-37	144
MS.gene009614.t1	AT3G21240	27.455	448	285	12	39	473	63	483	4.37e-37	144
MS.gene009614.t1	AT4G19010	26.606	545	317	19	32	543	63	557	1.26e-36	144
MS.gene009614.t1	AT1G65060	27.473	546	348	16	10	541	46	557	1.85e-36	143
MS.gene009614.t1	AT3G48990	26.580	538	343	18	19	542	9	508	2.34e-35	139
MS.gene009614.t1	AT1G51680	26.568	542	333	15	27	541	51	554	3.05e-35	140
MS.gene009614.t1	AT1G30520	24.779	565	353	14	20	542	13	547	6.30e-35	139
MS.gene009614.t1	AT1G30520	24.779	565	353	14	20	542	13	547	6.30e-35	139
MS.gene009614.t1	AT1G20480	26.401	553	349	17	14	543	43	560	1.61e-34	137
MS.gene009614.t1	AT5G38120	27.579	504	308	17	59	543	85	550	1.02e-33	135
MS.gene009614.t1	AT1G62940	27.799	518	318	18	41	541	55	533	1.59e-33	134
MS.gene009614.t1	AT5G63380	29.380	371	237	9	185	546	202	556	2.98e-32	131
MS.gene009614.t1	AT3G21230	27.434	452	284	15	39	473	73	497	9.26e-32	129
MS.gene009614.t1	AT1G51680	26.639	488	297	13	27	487	51	504	1.53e-30	125
MS.gene009614.t1	AT1G20510	26.164	451	279	15	40	472	58	472	1.57e-29	122
MS.gene009614.t1	AT5G36880	24.680	547	347	16	37	544	145	665	4.51e-28	119
MS.gene009614.t1	AT5G36880	24.680	547	347	16	37	544	145	665	4.51e-28	119
MS.gene009614.t1	AT5G36880	24.680	547	347	16	37	544	145	665	4.51e-28	119
MS.gene009614.t1	AT5G36880	24.680	547	347	16	37	544	145	665	4.51e-28	119
MS.gene009614.t1	AT5G36880	24.680	547	347	16	37	544	195	715	4.85e-28	119
MS.gene009614.t1	AT5G38120	26.923	468	290	16	59	512	85	514	8.93e-28	117
MS.gene009614.t1	AT1G51680	25.949	474	290	13	27	473	51	490	8.80e-26	111
MS.gene009614.t1	AT5G38120	27.103	428	264	14	59	472	85	478	1.68e-24	107
MS.gene009614.t1	AT5G38120	27.103	428	264	14	59	472	85	478	1.68e-24	107
MS.gene009614.t1	AT3G16170	27.249	389	228	16	188	542	235	602	3.71e-24	107
MS.gene009614.t1	AT1G20510	25.225	444	273	15	40	459	58	466	9.32e-24	105
MS.gene009614.t1	AT1G30520	23.667	469	296	11	20	456	13	451	3.15e-22	100
MS.gene009614.t1	AT1G30520	23.667	469	296	11	20	456	13	451	3.15e-22	100
MS.gene009614.t1	AT1G65060	25.835	449	289	14	10	444	46	464	9.54e-21	95.9
MS.gene009614.t1	AT1G20490	24.468	376	239	10	59	420	84	428	2.31e-16	82.0
MS.gene009614.t1	AT1G20490	24.468	376	239	10	59	420	84	428	2.31e-16	82.0
MS.gene009614.t1	AT3G21230	25.000	392	249	15	39	414	73	435	1.26e-13	73.6
MS.gene009614.t1	AT1G77590	45.263	95	44	4	391	479	352	444	3.49e-12	69.3
MS.gene009614.t1	AT1G77590	45.263	95	44	4	391	479	498	590	3.66e-12	69.7

Find 164 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGATAAACCCAGTTAAAATT+TGG	0.167962	5.3:+61112758	None:intergenic
TTCATACATGGCGGGGATAT+TGG	0.217439	5.3:+61113069	None:intergenic
TTTGGTCTTTGATGAGAATA+AGG	0.251554	5.3:+61112864	None:intergenic
CATAGATAAATCGGTTGTTT+TGG	0.282266	5.3:+61112608	None:intergenic
TGGCGAGGGAGGATGAGTTT+TGG	0.295270	5.3:-61111869	MS.gene009614:CDS
ATTGGGTCCCACTCTGAGTT+TGG	0.312073	5.3:+61112737	None:intergenic
AGAGGTGGTTGTGTTATGTT+AGG	0.319020	5.3:-61112098	MS.gene009614:CDS
TCCACCGGACAGAAGCTTTA+GGG	0.321988	5.3:-61112337	MS.gene009614:CDS
GAAGAATTTGCCGCATTATA+TGG	0.322752	5.3:-61111757	MS.gene009614:CDS
TTTCGTATGTTTCAAATGTT+TGG	0.332759	5.3:+61112846	None:intergenic
GACAGAAGCTTTAGGGTTTA+CGG	0.333166	5.3:-61112330	MS.gene009614:CDS
GTGCTCCAGCTGTTAAAATA+TGG	0.337925	5.3:+61112378	None:intergenic
CAAAACAACCGATTTATCTA+TGG	0.342133	5.3:-61112607	MS.gene009614:CDS
TTCAACTTACGAAGATCTAA+TGG	0.345402	5.3:-61112792	MS.gene009614:CDS
GATGTCTACGAAAACGAGTT+TGG	0.355936	5.3:+61112949	None:intergenic
CTCCACCGGACAGAAGCTTT+AGG	0.361731	5.3:-61112338	MS.gene009614:CDS
GTTGTACATGGAAGAAGAAA+TGG	0.364282	5.3:-61112262	MS.gene009614:CDS
TCATACATGGCGGGGATATT+GGG	0.367102	5.3:+61113070	None:intergenic
TGGAGGACCGCCGCAGGCGG+CGG	0.373347	5.3:+61112356	None:intergenic
TCAAAAGATGTTATTATTAG+TGG	0.384798	5.3:-61111966	MS.gene009614:CDS
TACGAAGATCTAATGGCTTC+CGG	0.385659	5.3:-61112785	MS.gene009614:CDS
TTTACGGTAAGTCATGGTTA+TGG	0.387733	5.3:-61112314	MS.gene009614:CDS
TGAGTGGAGAGCTGTTTGCT+TGG	0.402531	5.3:+61113263	None:intergenic
TTACGGTAAGTCATGGTTAT+GGG	0.404988	5.3:-61112313	MS.gene009614:CDS
TGAGAATGAACTACACCTTT+TGG	0.414086	5.3:+61112680	None:intergenic
ATGTTACTCAACTACACTTC+CGG	0.423263	5.3:-61112716	MS.gene009614:CDS
TAGATGATGGAAGGTGTGTT+GGG	0.424936	5.3:+61113202	None:intergenic
CCAGTTAAAATTTGGATCTC+CGG	0.426282	5.3:+61112766	None:intergenic
GGCGCGTGTTGATGTTGTTA+AGG	0.430348	5.3:+61113014	None:intergenic
GGAGAGCTGTTTGCTTGGGT+TGG	0.431299	5.3:+61113268	None:intergenic
GAGTGGAGAGCTGTTTGCTT+GGG	0.433336	5.3:+61113264	None:intergenic
CGCCTGCGGCGGTCCTCCAC+CGG	0.440831	5.3:-61112352	MS.gene009614:CDS
TGGAGCACCGCCGCCTGCGG+CGG	0.446124	5.3:-61112363	MS.gene009614:CDS
TGAAGCGGCGGTGGTGGCGA+GGG	0.447099	5.3:-61111883	MS.gene009614:CDS
AAGAGATATTTGAGTACTGT+AGG	0.450823	5.3:-61111779	MS.gene009614:CDS
TGTTGAGGTCCTTTCTAAGA+AGG	0.453809	5.3:+61113231	None:intergenic
GGTAGCGTCCATAGATAAAT+CGG	0.454879	5.3:+61112599	None:intergenic
GGTGAATGAAGCGGCGGTGG+TGG	0.459912	5.3:-61111889	MS.gene009614:CDS
AGCTGGAGCACCGCCGCCTG+CGG	0.470098	5.3:-61112366	MS.gene009614:CDS
GATTGGTGGTTTGTTGTACA+TGG	0.470182	5.3:-61112274	MS.gene009614:CDS
TGAAAGAAGGGTTGAAGGAA+AGG	0.471669	5.3:-61111818	MS.gene009614:CDS
AAGAAGGTGAGAGGGGTGAG+TGG	0.473343	5.3:+61113247	None:intergenic
GAAGAAATGGAACTTGTTGC+CGG	0.473528	5.3:-61112249	MS.gene009614:CDS
TACCTATGTTCCATGCTAAC+GGG	0.476941	5.3:-61112580	MS.gene009614:CDS
GACACACATGTGCGGTGCTC+CGG	0.478003	5.3:-61112456	MS.gene009614:CDS
AAGGGAATAAGGATAAAGCT+TGG	0.478093	5.3:+61112906	None:intergenic
CAAGTTGGAGGCATCGTTGG+TGG	0.479366	5.3:+61113149	None:intergenic
GCCTCCGCCATCACCTCCTT+AGG	0.480944	5.3:-61113127	MS.gene009614:CDS
GAGTTTGAAAGAAGGGTTGA+AGG	0.486977	5.3:-61111823	MS.gene009614:CDS
GTCCGGTGGAGGACCGCCGC+AGG	0.491037	5.3:+61112350	None:intergenic
GGCGGTGAATGAAGCGGCGG+TGG	0.492487	5.3:-61111892	MS.gene009614:CDS
TCAAATATCTCTTTCTCCGT+TGG	0.493592	5.3:+61111789	None:intergenic
CGGCAAGGAGTGAGAACCCT+AGG	0.499171	5.3:-61112200	MS.gene009614:CDS
GGTATTTAGAGATTAAAGAT+AGG	0.504970	5.3:-61111989	MS.gene009614:CDS
GGGGATATTGGGAGCGATGA+CGG	0.505703	5.3:+61113081	None:intergenic
CTACCTATGTTCCATGCTAA+CGG	0.506459	5.3:-61112581	MS.gene009614:CDS
AACGGTGTCGTTGTAGATGA+TGG	0.514741	5.3:+61113189	None:intergenic
GGTTATGGGCTAACGGAGAC+AGG	0.514951	5.3:-61112299	MS.gene009614:CDS
GAACTTCCTAAGACTTCTAC+CGG	0.520177	5.3:-61111708	MS.gene009614:CDS
TTAAGGATAGCGCCGGTGAA+GGG	0.521208	5.3:+61113031	None:intergenic
CACTTCGCCGTCCCCTTCAC+CGG	0.522016	5.3:-61113043	MS.gene009614:CDS
GAGTAGTGTGGAGGTTGAGT+CGG	0.523111	5.3:-61111931	MS.gene009614:CDS
GAAGTGTAGTTGAGTAACAT+TGG	0.523302	5.3:+61112719	None:intergenic
GTTTGGATTCACAGTGGAGG+AGG	0.524317	5.3:+61112966	None:intergenic
CATCAACCTTTGTCATCCCT+AGG	0.524830	5.3:+61112183	None:intergenic
AAGTGGAGTTCATACATGGC+GGG	0.525594	5.3:+61113061	None:intergenic
GTTAAGGATAGCGCCGGTGA+AGG	0.526761	5.3:+61113030	None:intergenic
AGGCAAGTTGGAGGCATCGT+TGG	0.528678	5.3:+61113146	None:intergenic
GCTAACGGAGACAGGTGGAT+TGG	0.530128	5.3:-61112291	MS.gene009614:CDS
AGGTGATGGCGGAGGCAAGT+TGG	0.530518	5.3:+61113134	None:intergenic
CCCCTCTCACCTTCTTAGAA+AGG	0.531424	5.3:-61113240	MS.gene009614:CDS
CTAACGGGTGGAGCTTCCCG+TGG	0.532728	5.3:-61112565	MS.gene009614:CDS
GGAACAACGTCGTCGCCAAA+AGG	0.533622	5.3:-61112695	MS.gene009614:CDS
AGCGGCGGTGGTGGCGAGGG+AGG	0.534214	5.3:-61111880	MS.gene009614:CDS
GGTGAAGTTGTTATGAGAGG+TGG	0.535576	5.3:-61112113	MS.gene009614:CDS
AAGTGTAGTTGAGTAACATT+GGG	0.537573	5.3:+61112720	None:intergenic
GTAGATGATGGAAGGTGTGT+TGG	0.537719	5.3:+61113201	None:intergenic
AAACGAGATGGAGCAACGCT+TGG	0.538085	5.3:-61112134	MS.gene009614:CDS
TAACGGGTGGAGCTTCCCGT+GGG	0.539163	5.3:-61112564	MS.gene009614:CDS
TTCACAGTGGAGGAGGATGT+TGG	0.540188	5.3:+61112973	None:intergenic
GAAAGAAGGGTTGAAGGAAA+GGG	0.542197	5.3:-61111817	MS.gene009614:CDS
CGGTGGAGGACCGCCGCAGG+CGG	0.542338	5.3:+61112353	None:intergenic
GTTGCCACGGCGGATACCTA+AGG	0.542689	5.3:+61113111	None:intergenic
GGAAGCTCCACCCGTTAGCA+TGG	0.553881	5.3:+61112570	None:intergenic
AACGGAGACAGGTGGATTGG+TGG	0.554790	5.3:-61112288	MS.gene009614:CDS
TTAGGGTTTACGGTAAGTCA+TGG	0.559864	5.3:-61112320	MS.gene009614:CDS
ATGAAGCGGCGGTGGTGGCG+AGG	0.560306	5.3:-61111884	MS.gene009614:CDS
TGATGGCGGAGGCAAGTTGG+AGG	0.560492	5.3:+61113137	None:intergenic
CTAAAGCTTCTGTCCGGTGG+AGG	0.563322	5.3:+61112339	None:intergenic
GTAGGTGTAATGCATGAAGA+TGG	0.563846	5.3:-61112011	MS.gene009614:CDS
CCGTCGATTCATTAATCGAA+TGG	0.563892	5.3:-61112637	MS.gene009614:CDS
TCCTTTCTAAGAAGGTGAGA+GGG	0.564104	5.3:+61113239	None:intergenic
GAGGTGGTTGTGTTATGTTA+GGG	0.565042	5.3:-61112097	MS.gene009614:CDS
ACCCTAAAGCTTCTGTCCGG+TGG	0.565348	5.3:+61112336	None:intergenic
GATGACAAAGGTTGATGTAG+TGG	0.565684	5.3:-61112177	MS.gene009614:CDS
AAGTTGGAGGCATCGTTGGT+GGG	0.567587	5.3:+61113150	None:intergenic
AAAGATGTTATTATTAGTGG+TGG	0.569732	5.3:-61111963	MS.gene009614:CDS
ATCAACCTTTGTCATCCCTA+GGG	0.569958	5.3:+61112184	None:intergenic
ACACATGTGCGGTGCTCCGG+TGG	0.575801	5.3:-61112453	MS.gene009614:CDS
GGCGAAGTGGAGTTCATACA+TGG	0.576977	5.3:+61113057	None:intergenic
ACCTAAGGAGGTGATGGCGG+AGG	0.578934	5.3:+61113126	None:intergenic
AACCTTGCTCTCTCAGTCGC+CGG	0.579790	5.3:+61112230	None:intergenic
ACGGGTGGAGCTTCCCGTGG+GGG	0.582132	5.3:-61112562	MS.gene009614:CDS
TAAACCCTAAAGCTTCTGTC+CGG	0.583489	5.3:+61112333	None:intergenic
GCGGATACCTAAGGAGGTGA+TGG	0.586485	5.3:+61113120	None:intergenic
ACTACTGCATCCTTCCTAAG+TGG	0.587459	5.3:+61111639	None:intergenic
GGTGAGAGTGTAAAACGAGA+TGG	0.588528	5.3:-61112146	MS.gene009614:CDS
GGTTTGAGACCATGTGAAAA+CGG	0.588780	5.3:+61113171	None:intergenic
CTAAGGATATGGGACCACTT+AGG	0.590978	5.3:-61111653	MS.gene009614:CDS
TGGTGAGAATTTGAGTAGTG+TGG	0.591809	5.3:-61111943	MS.gene009614:CDS
TGCCGGCGACTGAGAGAGCA+AGG	0.592319	5.3:-61112232	MS.gene009614:CDS
GGATATGGGACCACTTAGGA+AGG	0.592975	5.3:-61111649	MS.gene009614:CDS
GATAGCGCCGGTGAAGGGGA+CGG	0.593787	5.3:+61113036	None:intergenic
GTCCTTTCTAAGAAGGTGAG+AGG	0.597431	5.3:+61113238	None:intergenic
GTTAACATATTGAGAACCAC+CGG	0.598099	5.3:+61112437	None:intergenic
TAGGTGTAATGCATGAAGAT+GGG	0.598284	5.3:-61112010	MS.gene009614:CDS
AAGTCATGGTTATGGGCTAA+CGG	0.601245	5.3:-61112306	MS.gene009614:CDS
AGAGAGCAAGGTTGAAGTCA+CGG	0.602793	5.3:-61112220	MS.gene009614:CDS
TAAGGATAGCGCCGGTGAAG+GGG	0.606863	5.3:+61113032	None:intergenic
CGATTCATTAATCGAATGGA+CGG	0.607542	5.3:-61112633	MS.gene009614:CDS
ATGACAAAGGTTGATGTAGT+GGG	0.607697	5.3:-61112176	MS.gene009614:CDS
GATACCTAAGGAGGTGATGG+CGG	0.608248	5.3:+61113123	None:intergenic
AACGGGTGGAGCTTCCCGTG+GGG	0.610896	5.3:-61112563	MS.gene009614:CDS
GTAAGTTGAAATAAAATCAA+CGG	0.612045	5.3:+61112805	None:intergenic
TGGAGATGATACGCGCGTCA+AGG	0.612771	5.3:+61112993	None:intergenic
CGGTGAAGGGGACGGCGAAG+TGG	0.613496	5.3:+61113044	None:intergenic
AGTGGAGTTCATACATGGCG+GGG	0.619050	5.3:+61113062	None:intergenic
TGACGGAGACGACGTTGCCA+CGG	0.621771	5.3:+61113098	None:intergenic
GGTTTATCCAAACTCAGAGT+GGG	0.624443	5.3:-61112744	MS.gene009614:CDS
ACCGCCGCTTCATTCACCGC+CGG	0.626771	5.3:+61111894	None:intergenic
GATGTTGTTAAGGATAGCGC+CGG	0.631854	5.3:+61113024	None:intergenic
CACCCGTTAGCATGGAACAT+AGG	0.633645	5.3:+61112578	None:intergenic
CTATGTTCCATGCTAACGGG+TGG	0.634027	5.3:-61112577	MS.gene009614:CDS
GGGTATTTGAAAGATAGTGA+AGG	0.636873	5.3:-61112077	MS.gene009614:CDS
GCAAGGTTGAAGTCACGGCA+AGG	0.639269	5.3:-61112215	MS.gene009614:CDS
CCATTCGATTAATGAATCGA+CGG	0.639592	5.3:+61112637	None:intergenic
TTCAAACTCACAAAAGCACA+CGG	0.644342	5.3:+61111837	None:intergenic
CGAGTTTGGATTCACAGTGG+AGG	0.647951	5.3:+61112963	None:intergenic
ACATCCGGCGGTGAATGAAG+CGG	0.648059	5.3:-61111898	MS.gene009614:CDS
AGATGATGGAAGGTGTGTTG+GGG	0.657967	5.3:+61113203	None:intergenic
CTTGGTGAAGTTGTTATGAG+AGG	0.659010	5.3:-61112116	MS.gene009614:CDS
TCCGGCGGTGAATGAAGCGG+CGG	0.659853	5.3:-61111895	MS.gene009614:CDS
GGGTTTATCCAAACTCAGAG+TGG	0.661044	5.3:-61112745	MS.gene009614:CDS
TGTGTTGGGGTAGATTGTTG+AGG	0.663077	5.3:+61113216	None:intergenic
GGCAAGGAGTGAGAACCCTA+GGG	0.664706	5.3:-61112199	MS.gene009614:CDS
CGGTTATGATGAAAGTTCCA+CGG	0.667044	5.3:+61112657	None:intergenic
TATGGGCTAACGGAGACAGG+TGG	0.670119	5.3:-61112296	MS.gene009614:CDS
GCCACGGCGGATACCTAAGG+AGG	0.671985	5.3:+61113114	None:intergenic
AGTTGAAATAAAATCAACGG+TGG	0.674593	5.3:+61112808	None:intergenic
CCTTTCTAAGAAGGTGAGAG+GGG	0.676211	5.3:+61113240	None:intergenic
GTGTCGTTGTAGATGATGGA+AGG	0.678506	5.3:+61113193	None:intergenic
GAAGGAAAGGGAAATACCAA+CGG	0.678611	5.3:-61111805	MS.gene009614:CDS
TGAGAATTTGAGTAGTGTGG+AGG	0.682689	5.3:-61111940	MS.gene009614:CDS
CATCACGTGACACACATGTG+CGG	0.688035	5.3:-61112464	MS.gene009614:CDS
GAAGTGGAGTTCATACATGG+CGG	0.691480	5.3:+61113060	None:intergenic
TTGGAGAACAAGATCACGTG+CGG	0.694992	5.3:+61112925	None:intergenic
AACTTCCTAAGACTTCTACC+GGG	0.701789	5.3:-61111707	MS.gene009614:CDS
CGGAGACGACGTTGCCACGG+CGG	0.706270	5.3:+61113101	None:intergenic
TCTTTGATGAGAATAAGGAG+AGG	0.708659	5.3:+61112869	None:intergenic
GAGAACCCTAGGGATGACAA+AGG	0.708804	5.3:-61112189	MS.gene009614:CDS
ACCTCCTTAGGTATCCGCCG+TGG	0.710239	5.3:-61113115	MS.gene009614:CDS
AAACGAGTTTGGATTCACAG+TGG	0.732789	5.3:+61112960	None:intergenic
GTTGATGTAGTGGGTCCCAG+TGG	0.749534	5.3:-61112167	MS.gene009614:CDS
GGTGTAGTTCATTCTCACCG+TGG	0.756588	5.3:-61112674	MS.gene009614:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCAAAAGATGTTATTATTAG+TGG	-	chr5.3:61112937-61112956	MS.gene009614:CDS	20.0%
!!!	AACAAAGAATTGTTTTAAGA+AGG	-	chr5.3:61112849-61112868	MS.gene009614:CDS	20.0%
!!!	ACAAAGAATTGTTTTAAGAA+GGG	-	chr5.3:61112850-61112869	MS.gene009614:CDS	20.0%
!!!	GTAAGTTGAAATAAAATCAA+CGG	+	chr5.3:61112101-61112120	None:intergenic	20.0%
!	AAAGATGTTATTATTAGTGG+TGG	-	chr5.3:61112940-61112959	MS.gene009614:CDS	25.0%
!	AGAAAAATTGCTAAGGATAT+GGG	-	chr5.3:61113240-61113259	MS.gene009614:CDS	25.0%
!	GGTATTTAGAGATTAAAGAT+AGG	-	chr5.3:61112914-61112933	MS.gene009614:CDS	25.0%
!	TAGAAAAATTGCTAAGGATA+TGG	-	chr5.3:61113239-61113258	MS.gene009614:CDS	25.0%
!	TGTACTTAGAAAAATTGCTA+AGG	-	chr5.3:61113233-61113252	MS.gene009614:CDS	25.0%
!	TTTCGTATGTTTCAAATGTT+TGG	+	chr5.3:61112060-61112079	None:intergenic	25.0%
	AAGTGTAGTTGAGTAACATT+GGG	+	chr5.3:61112186-61112205	None:intergenic	30.0%
	AGTTGAAATAAAATCAACGG+TGG	+	chr5.3:61112098-61112117	None:intergenic	30.0%
	GCATTATATGGTTCCAAAAA+CGG	-	chr5.3:61113158-61113177	MS.gene009614:CDS	30.0%
	GGATAAACCCAGTTAAAATT+TGG	+	chr5.3:61112148-61112167	None:intergenic	30.0%
	TTCAACTTACGAAGATCTAA+TGG	-	chr5.3:61112111-61112130	MS.gene009614:CDS	30.0%
!	AAGAGATATTTGAGTACTGT+AGG	-	chr5.3:61113124-61113143	MS.gene009614:CDS	30.0%
!	CAAAACAACCGATTTATCTA+TGG	-	chr5.3:61112296-61112315	MS.gene009614:CDS	30.0%
!	CATAGATAAATCGGTTGTTT+TGG	+	chr5.3:61112298-61112317	None:intergenic	30.0%
!	CTTTTGTGAGTTTGAAAGAA+GGG	-	chr5.3:61113073-61113092	MS.gene009614:CDS	30.0%
!	TACAAACTTCTGAATTTTCC+CGG	+	chr5.3:61113217-61113236	None:intergenic	30.0%
!	TTTGGTCTTTGATGAGAATA+AGG	+	chr5.3:61112042-61112061	None:intergenic	30.0%
!	TTTTGCAACGGTTTATTATC+AGG	+	chr5.3:61112499-61112518	None:intergenic	30.0%
!!!	AGAATTGTTTTAAGAAGGGT+TGG	-	chr5.3:61112854-61112873	MS.gene009614:CDS	30.0%
!!!	AGAGGTTTATGTTGTTTTGA+AGG	+	chr5.3:61112019-61112038	None:intergenic	30.0%
!!!	ATATGGACAGTTTTTTGCAA+CGG	+	chr5.3:61112511-61112530	None:intergenic	30.0%
!!!	ATGTTGTTTTGAAGGGAATA+AGG	+	chr5.3:61112011-61112030	None:intergenic	30.0%
!!!	GAGGTTTATGTTGTTTTGAA+GGG	+	chr5.3:61112018-61112037	None:intergenic	30.0%
!!!	GTTTTTGGAACCATATAATG+CGG	+	chr5.3:61113159-61113178	None:intergenic	30.0%
	AAGGGAATAAGGATAAAGCT+TGG	+	chr5.3:61112000-61112019	None:intergenic	35.0%
	ATGTTACTCAACTACACTTC+CGG	-	chr5.3:61112187-61112206	MS.gene009614:CDS	35.0%
	CCAGTTAAAATTTGGATCTC+CGG	+	chr5.3:61112140-61112159	None:intergenic	35.0%
	CCATTCGATTAATGAATCGA+CGG	+	chr5.3:61112269-61112288	None:intergenic	35.0%
	CGATTCATTAATCGAATGGA+CGG	-	chr5.3:61112270-61112289	MS.gene009614:CDS	35.0%
	GAAGAATTTGCCGCATTATA+TGG	-	chr5.3:61113146-61113165	MS.gene009614:CDS	35.0%
	GAAGTGTAGTTGAGTAACAT+TGG	+	chr5.3:61112187-61112206	None:intergenic	35.0%
	GGGTATTTGAAAGATAGTGA+AGG	-	chr5.3:61112826-61112845	MS.gene009614:CDS	35.0%
	GTTAACATATTGAGAACCAC+CGG	+	chr5.3:61112469-61112488	None:intergenic	35.0%
	GTTGTACATGGAAGAAGAAA+TGG	-	chr5.3:61112641-61112660	MS.gene009614:CDS	35.0%
	TAGGTGTAATGCATGAAGAT+GGG	-	chr5.3:61112893-61112912	MS.gene009614:CDS	35.0%
	TCAAATATCTCTTTCTCCGT+TGG	+	chr5.3:61113117-61113136	None:intergenic	35.0%
	TCTTTGATGAGAATAAGGAG+AGG	+	chr5.3:61112037-61112056	None:intergenic	35.0%
	TTACGGTAAGTCATGGTTAT+GGG	-	chr5.3:61112590-61112609	MS.gene009614:CDS	35.0%
	TTATATGGTTCCAAAAACGG+TGG	-	chr5.3:61113161-61113180	MS.gene009614:CDS	35.0%
	TTTACGGTAAGTCATGGTTA+TGG	-	chr5.3:61112589-61112608	MS.gene009614:CDS	35.0%
!	GCTTTTGTGAGTTTGAAAGA+AGG	-	chr5.3:61113072-61113091	MS.gene009614:CDS	35.0%
!	TCTTTAAACACCACCGTTTT+TGG	+	chr5.3:61113174-61113193	None:intergenic	35.0%
!	TGAGAATGAACTACACCTTT+TGG	+	chr5.3:61112226-61112245	None:intergenic	35.0%
!	TTCAAACTCACAAAAGCACA+CGG	+	chr5.3:61113069-61113088	None:intergenic	35.0%
!!	ATGACAAAGGTTGATGTAGT+GGG	-	chr5.3:61112727-61112746	MS.gene009614:CDS	35.0%
!!!	ACTGTCCATATTTTAACAGC+TGG	-	chr5.3:61112520-61112539	MS.gene009614:CDS	35.0%
!!!	CGGAGATCCAAATTTTAACT+GGG	-	chr5.3:61112138-61112157	MS.gene009614:CDS	35.0%
	AAACGAGTTTGGATTCACAG+TGG	+	chr5.3:61111946-61111965	None:intergenic	40.0%
	AACTTCCTAAGACTTCTACC+GGG	-	chr5.3:61113196-61113215	MS.gene009614:CDS	40.0%
	AGAGGTGGTTGTGTTATGTT+AGG	-	chr5.3:61112805-61112824	MS.gene009614:CDS	40.0%
	ATCAACCTTTGTCATCCCTA+GGG	+	chr5.3:61112722-61112741	None:intergenic	40.0%
	CGGTTATGATGAAAGTTCCA+CGG	+	chr5.3:61112249-61112268	None:intergenic	40.0%
	CTACCTATGTTCCATGCTAA+CGG	-	chr5.3:61112322-61112341	MS.gene009614:CDS	40.0%
	CTTGGTGAAGTTGTTATGAG+AGG	-	chr5.3:61112787-61112806	MS.gene009614:CDS	40.0%
	GAAAGAAGGGTTGAAGGAAA+GGG	-	chr5.3:61113086-61113105	MS.gene009614:CDS	40.0%
	GAACTTCCTAAGACTTCTAC+CGG	-	chr5.3:61113195-61113214	MS.gene009614:CDS	40.0%
	GAAGGAAAGGGAAATACCAA+CGG	-	chr5.3:61113098-61113117	MS.gene009614:CDS	40.0%
	GAGGTGGTTGTGTTATGTTA+GGG	-	chr5.3:61112806-61112825	MS.gene009614:CDS	40.0%
	GAGTTTGAAAGAAGGGTTGA+AGG	-	chr5.3:61113080-61113099	MS.gene009614:CDS	40.0%
	GATGTCTACGAAAACGAGTT+TGG	+	chr5.3:61111957-61111976	None:intergenic	40.0%
	GGTAGCGTCCATAGATAAAT+CGG	+	chr5.3:61112307-61112326	None:intergenic	40.0%
	GGTTTATCCAAACTCAGAGT+GGG	-	chr5.3:61112159-61112178	MS.gene009614:CDS	40.0%
	GTAGGTGTAATGCATGAAGA+TGG	-	chr5.3:61112892-61112911	MS.gene009614:CDS	40.0%
	GTGCTCCAGCTGTTAAAATA+TGG	+	chr5.3:61112528-61112547	None:intergenic	40.0%
	TAAACCCTAAAGCTTCTGTC+CGG	+	chr5.3:61112573-61112592	None:intergenic	40.0%
	TACCTATGTTCCATGCTAAC+GGG	-	chr5.3:61112323-61112342	MS.gene009614:CDS	40.0%
	TACGAAGATCTAATGGCTTC+CGG	-	chr5.3:61112118-61112137	MS.gene009614:CDS	40.0%
	TGAAAGAAGGGTTGAAGGAA+AGG	-	chr5.3:61113085-61113104	MS.gene009614:CDS	40.0%
	TGAGAATTTGAGTAGTGTGG+AGG	-	chr5.3:61112963-61112982	MS.gene009614:CDS	40.0%
	TGGTGAGAATTTGAGTAGTG+TGG	-	chr5.3:61112960-61112979	MS.gene009614:CDS	40.0%
	TTAGGGTTTACGGTAAGTCA+TGG	-	chr5.3:61112583-61112602	MS.gene009614:CDS	40.0%
!	AAGTCATGGTTATGGGCTAA+CGG	-	chr5.3:61112597-61112616	MS.gene009614:CDS	40.0%
!	ATTTTCCCGGTAGAAGTCTT+AGG	+	chr5.3:61113204-61113223	None:intergenic	40.0%
!	GGTTTGAGACCATGTGAAAA+CGG	+	chr5.3:61111735-61111754	None:intergenic	40.0%
!	TCCTTTCTAAGAAGGTGAGA+GGG	+	chr5.3:61111667-61111686	None:intergenic	40.0%
!	TGTTGAGGTCCTTTCTAAGA+AGG	+	chr5.3:61111675-61111694	None:intergenic	40.0%
!!	CCGGAGATCCAAATTTTAAC+TGG	-	chr5.3:61112137-61112156	MS.gene009614:CDS	40.0%
!!	CCGTCGATTCATTAATCGAA+TGG	-	chr5.3:61112266-61112285	MS.gene009614:CDS	40.0%
!!	GAAGAAATGGAACTTGTTGC+CGG	-	chr5.3:61112654-61112673	MS.gene009614:CDS	40.0%
!!	GACAGAAGCTTTAGGGTTTA+CGG	-	chr5.3:61112573-61112592	MS.gene009614:CDS	40.0%
!!	GATGACAAAGGTTGATGTAG+TGG	-	chr5.3:61112726-61112745	MS.gene009614:CDS	40.0%
!!	GATTGGTGGTTTGTTGTACA+TGG	-	chr5.3:61112629-61112648	MS.gene009614:CDS	40.0%
!!	TAGATGATGGAAGGTGTGTT+GGG	+	chr5.3:61111704-61111723	None:intergenic	40.0%
!!	TGGTTTTACACTGGTGATGT+AGG	-	chr5.3:61112874-61112893	MS.gene009614:CDS	40.0%
!!!	AAGAAGGGTTGGTTTTACAC+TGG	-	chr5.3:61112865-61112884	MS.gene009614:CDS	40.0%
!!!	TTGCTTGGGTTGGTTTTAGT+TGG	+	chr5.3:61111628-61111647	None:intergenic	40.0%
	AAGTGGAGTTCATACATGGC+GGG	+	chr5.3:61111845-61111864	None:intergenic	45.0%
	ACTACTGCATCCTTCCTAAG+TGG	+	chr5.3:61113267-61113286	None:intergenic	45.0%
	AGAGAGCAAGGTTGAAGTCA+CGG	-	chr5.3:61112683-61112702	MS.gene009614:CDS	45.0%
	CATCAACCTTTGTCATCCCT+AGG	+	chr5.3:61112723-61112742	None:intergenic	45.0%
	CTAAGGATATGGGACCACTT+AGG	-	chr5.3:61113250-61113269	MS.gene009614:CDS	45.0%
	GAAGTGGAGTTCATACATGG+CGG	+	chr5.3:61111846-61111865	None:intergenic	45.0%
	GATGTTGTTAAGGATAGCGC+CGG	+	chr5.3:61111882-61111901	None:intergenic	45.0%
	GGGTTTATCCAAACTCAGAG+TGG	-	chr5.3:61112158-61112177	MS.gene009614:CDS	45.0%
	GGTGAAGTTGTTATGAGAGG+TGG	-	chr5.3:61112790-61112809	MS.gene009614:CDS	45.0%
	TGTGTTGGGGTAGATTGTTG+AGG	+	chr5.3:61111690-61111709	None:intergenic	45.0%
	TTGGAGAACAAGATCACGTG+CGG	+	chr5.3:61111981-61112000	None:intergenic	45.0%
!	ACAACGACACCGTTTTCACA+TGG	-	chr5.3:61111723-61111742	MS.gene009614:CDS	45.0%
!	CCTTTCTAAGAAGGTGAGAG+GGG	+	chr5.3:61111666-61111685	None:intergenic	45.0%
!	CGTTTTACACTCTCACCACT+GGG	+	chr5.3:61112754-61112773	None:intergenic	45.0%
!	GGTGAGAGTGTAAAACGAGA+TGG	-	chr5.3:61112757-61112776	MS.gene009614:CDS	45.0%
!	GTCCTTTCTAAGAAGGTGAG+AGG	+	chr5.3:61111668-61111687	None:intergenic	45.0%
!	TCATACATGGCGGGGATATT+GGG	+	chr5.3:61111836-61111855	None:intergenic	45.0%
!	TCGTTTTACACTCTCACCAC+TGG	+	chr5.3:61112755-61112774	None:intergenic	45.0%
!	TTCATACATGGCGGGGATAT+TGG	+	chr5.3:61111837-61111856	None:intergenic	45.0%
!!	AACGGTGTCGTTGTAGATGA+TGG	+	chr5.3:61111717-61111736	None:intergenic	45.0%
!!	AGATGATGGAAGGTGTGTTG+GGG	+	chr5.3:61111703-61111722	None:intergenic	45.0%
!!	GAGGTTGAGTCGGTTTTGTA+TGG	-	chr5.3:61112982-61113001	MS.gene009614:CDS	45.0%
!!	GTAGATGATGGAAGGTGTGT+TGG	+	chr5.3:61111705-61111724	None:intergenic	45.0%
!!	GTCGGTTTTGTATGGACATC+CGG	-	chr5.3:61112990-61113009	MS.gene009614:CDS	45.0%
!!	GTGTCGTTGTAGATGATGGA+AGG	+	chr5.3:61111713-61111732	None:intergenic	45.0%
	AAACGAGATGGAGCAACGCT+TGG	-	chr5.3:61112769-61112788	MS.gene009614:CDS	50.0%
	AGTGGAGTTCATACATGGCG+GGG	+	chr5.3:61111844-61111863	None:intergenic	50.0%
	ATTGGGTCCCACTCTGAGTT+TGG	+	chr5.3:61112169-61112188	None:intergenic	50.0%
	CACCCGTTAGCATGGAACAT+AGG	+	chr5.3:61112328-61112347	None:intergenic	50.0%
	CATCACGTGACACACATGTG+CGG	-	chr5.3:61112439-61112458	MS.gene009614:CDS	50.0%
	CCCCTCTCACCTTCTTAGAA+AGG	-	chr5.3:61111663-61111682	MS.gene009614:CDS	50.0%
	CGAGTTTGGATTCACAGTGG+AGG	+	chr5.3:61111943-61111962	None:intergenic	50.0%
	CTATGTTCCATGCTAACGGG+TGG	-	chr5.3:61112326-61112345	MS.gene009614:CDS	50.0%
	GAGAACCCTAGGGATGACAA+AGG	-	chr5.3:61112714-61112733	MS.gene009614:CDS	50.0%
	GAGTAGTGTGGAGGTTGAGT+CGG	-	chr5.3:61112972-61112991	MS.gene009614:CDS	50.0%
	GAGTGGAGAGCTGTTTGCTT+GGG	+	chr5.3:61111642-61111661	None:intergenic	50.0%
	GGATATGGGACCACTTAGGA+AGG	-	chr5.3:61113254-61113273	MS.gene009614:CDS	50.0%
	GGCGAAGTGGAGTTCATACA+TGG	+	chr5.3:61111849-61111868	None:intergenic	50.0%
	GGTGTAGTTCATTCTCACCG+TGG	-	chr5.3:61112229-61112248	MS.gene009614:CDS	50.0%
	GTTTGGATTCACAGTGGAGG+AGG	+	chr5.3:61111940-61111959	None:intergenic	50.0%
	TCCACCGGACAGAAGCTTTA+GGG	-	chr5.3:61112566-61112585	MS.gene009614:CDS	50.0%
	TGAGTGGAGAGCTGTTTGCT+TGG	+	chr5.3:61111643-61111662	None:intergenic	50.0%
	TTCACAGTGGAGGAGGATGT+TGG	+	chr5.3:61111933-61111952	None:intergenic	50.0%
!	GATACCTAAGGAGGTGATGG+CGG	+	chr5.3:61111783-61111802	None:intergenic	50.0%
!	GGCGCGTGTTGATGTTGTTA+AGG	+	chr5.3:61111892-61111911	None:intergenic	50.0%
!	TTTTGGCGACGACGTTGTTC+CGG	+	chr5.3:61112209-61112228	None:intergenic	50.0%
!!	AAGTTGGAGGCATCGTTGGT+GGG	+	chr5.3:61111756-61111775	None:intergenic	50.0%
!!	GGTTTTGTATGGACATCCGG+CGG	-	chr5.3:61112993-61113012	MS.gene009614:CDS	50.0%
!!	TTAAGGATAGCGCCGGTGAA+GGG	+	chr5.3:61111875-61111894	None:intergenic	50.0%
	AACCTTGCTCTCTCAGTCGC+CGG	+	chr5.3:61112676-61112695	None:intergenic	55.0%
	AAGAAGGTGAGAGGGGTGAG+TGG	+	chr5.3:61111659-61111678	None:intergenic	55.0%
	ACATCCGGCGGTGAATGAAG+CGG	-	chr5.3:61113005-61113024	MS.gene009614:CDS	55.0%
	ACCCTAAAGCTTCTGTCCGG+TGG	+	chr5.3:61112570-61112589	None:intergenic	55.0%
	CTAAAGCTTCTGTCCGGTGG+AGG	+	chr5.3:61112567-61112586	None:intergenic	55.0%
	CTCCACCGGACAGAAGCTTT+AGG	-	chr5.3:61112565-61112584	MS.gene009614:CDS	55.0%
	GCAAGGTTGAAGTCACGGCA+AGG	-	chr5.3:61112688-61112707	MS.gene009614:CDS	55.0%
	GCGGATACCTAAGGAGGTGA+TGG	+	chr5.3:61111786-61111805	None:intergenic	55.0%
	GCTAACGGAGACAGGTGGAT+TGG	-	chr5.3:61112612-61112631	MS.gene009614:CDS	55.0%
	GGAACAACGTCGTCGCCAAA+AGG	-	chr5.3:61112208-61112227	MS.gene009614:CDS	55.0%
	GGAGAGCTGTTTGCTTGGGT+TGG	+	chr5.3:61111638-61111657	None:intergenic	55.0%
	GGCAAGGAGTGAGAACCCTA+GGG	-	chr5.3:61112704-61112723	MS.gene009614:CDS	55.0%
	GGGGATATTGGGAGCGATGA+CGG	+	chr5.3:61111825-61111844	None:intergenic	55.0%
	TGGAGATGATACGCGCGTCA+AGG	+	chr5.3:61111913-61111932	None:intergenic	55.0%
!	GCGAGGGAGGATGAGTTTTG+GGG	-	chr5.3:61113036-61113055	MS.gene009614:CDS	55.0%
!	GGCGAGGGAGGATGAGTTTT+GGG	-	chr5.3:61113035-61113054	MS.gene009614:CDS	55.0%
!	GGTTATGGGCTAACGGAGAC+AGG	-	chr5.3:61112604-61112623	MS.gene009614:CDS	55.0%
!	TATGGGCTAACGGAGACAGG+TGG	-	chr5.3:61112607-61112626	MS.gene009614:CDS	55.0%
!	TGGCGAGGGAGGATGAGTTT+TGG	-	chr5.3:61113034-61113053	MS.gene009614:CDS	55.0%
!!	AACGGAGACAGGTGGATTGG+TGG	-	chr5.3:61112615-61112634	MS.gene009614:CDS	55.0%
!!	AGGCAAGTTGGAGGCATCGT+TGG	+	chr5.3:61111760-61111779	None:intergenic	55.0%
!!	CAAGTTGGAGGCATCGTTGG+TGG	+	chr5.3:61111757-61111776	None:intergenic	55.0%
!!	CGAGGGAGGATGAGTTTTGG+GGG	-	chr5.3:61113037-61113056	MS.gene009614:CDS	55.0%
!!	GTTAAGGATAGCGCCGGTGA+AGG	+	chr5.3:61111876-61111895	None:intergenic	55.0%
!!	GTTGATGTAGTGGGTCCCAG+TGG	-	chr5.3:61112736-61112755	MS.gene009614:CDS	55.0%
!!	TAAGGATAGCGCCGGTGAAG+GGG	+	chr5.3:61111874-61111893	None:intergenic	55.0%
!!!	GAGGGAGGATGAGTTTTGGG+GGG	-	chr5.3:61113038-61113057	MS.gene009614:CDS	55.0%
	ACCTCCTTAGGTATCCGCCG+TGG	-	chr5.3:61111788-61111807	MS.gene009614:CDS	60.0%
	CAACAGCTGCAATCCCCCAC+GGG	+	chr5.3:61112357-61112376	None:intergenic	60.0%
	CCAACAGCTGCAATCCCCCA+CGG	+	chr5.3:61112358-61112377	None:intergenic	60.0%
	CGGCAAGGAGTGAGAACCCT+AGG	-	chr5.3:61112703-61112722	MS.gene009614:CDS	60.0%
	GACACACATGTGCGGTGCTC+CGG	-	chr5.3:61112447-61112466	MS.gene009614:CDS	60.0%
	GGAAGCTCCACCCGTTAGCA+TGG	+	chr5.3:61112336-61112355	None:intergenic	60.0%
	GTTGCCACGGCGGATACCTA+AGG	+	chr5.3:61111795-61111814	None:intergenic	60.0%
	TGACGGAGACGACGTTGCCA+CGG	+	chr5.3:61111808-61111827	None:intergenic	60.0%
	TGGGGGATTGCAGCTGTTGG+TGG	-	chr5.3:61112358-61112377	MS.gene009614:CDS	60.0%
!	TAACGGGTGGAGCTTCCCGT+GGG	-	chr5.3:61112339-61112358	MS.gene009614:CDS	60.0%
!!	ACCTAAGGAGGTGATGGCGG+AGG	+	chr5.3:61111780-61111799	None:intergenic	60.0%
!!	AGGTGATGGCGGAGGCAAGT+TGG	+	chr5.3:61111772-61111791	None:intergenic	60.0%
!!	TGATGGCGGAGGCAAGTTGG+AGG	+	chr5.3:61111769-61111788	None:intergenic	60.0%
	AACGGGTGGAGCTTCCCGTG+GGG	-	chr5.3:61112340-61112359	MS.gene009614:CDS	65.0%
	ACACATGTGCGGTGCTCCGG+TGG	-	chr5.3:61112450-61112469	MS.gene009614:CDS	65.0%
	ACCGCCGCTTCATTCACCGC+CGG	+	chr5.3:61113012-61113031	None:intergenic	65.0%
	CACTTCGCCGTCCCCTTCAC+CGG	-	chr5.3:61111860-61111879	MS.gene009614:CDS	65.0%
	CCGTGGGGGATTGCAGCTGT+TGG	-	chr5.3:61112355-61112374	MS.gene009614:CDS	65.0%
	GCCACGGCGGATACCTAAGG+AGG	+	chr5.3:61111792-61111811	None:intergenic	65.0%
	GCCTCCGCCATCACCTCCTT+AGG	-	chr5.3:61111776-61111795	MS.gene009614:CDS	65.0%
	GGTGAATGAAGCGGCGGTGG+TGG	-	chr5.3:61113014-61113033	MS.gene009614:CDS	65.0%
	TCCGGCGGTGAATGAAGCGG+CGG	-	chr5.3:61113008-61113027	MS.gene009614:CDS	65.0%
	TGCCGGCGACTGAGAGAGCA+AGG	-	chr5.3:61112671-61112690	MS.gene009614:CDS	65.0%
!	CTAACGGGTGGAGCTTCCCG+TGG	-	chr5.3:61112338-61112357	MS.gene009614:CDS	65.0%
!!	GATAGCGCCGGTGAAGGGGA+CGG	+	chr5.3:61111870-61111889	None:intergenic	65.0%
	ACGGGTGGAGCTTCCCGTGG+GGG	-	chr5.3:61112341-61112360	MS.gene009614:CDS	70.0%
	CGGAGACGACGTTGCCACGG+CGG	+	chr5.3:61111805-61111824	None:intergenic	70.0%
	CGGTGAAGGGGACGGCGAAG+TGG	+	chr5.3:61111862-61111881	None:intergenic	70.0%
	GGCGGTGAATGAAGCGGCGG+TGG	-	chr5.3:61113011-61113030	MS.gene009614:CDS	70.0%
!	ATGAAGCGGCGGTGGTGGCG+AGG	-	chr5.3:61113019-61113038	MS.gene009614:CDS	70.0%
!	TGAAGCGGCGGTGGTGGCGA+GGG	-	chr5.3:61113020-61113039	MS.gene009614:CDS	70.0%
!!	AGCTGGAGCACCGCCGCCTG+CGG	-	chr5.3:61112537-61112556	MS.gene009614:CDS	75.0%
!	CGCCTGCGGCGGTCCTCCAC+CGG	-	chr5.3:61112551-61112570	MS.gene009614:CDS	80.0%
!	CGGTGGAGGACCGCCGCAGG+CGG	+	chr5.3:61112553-61112572	None:intergenic	80.0%
!	GTCCGGTGGAGGACCGCCGC+AGG	+	chr5.3:61112556-61112575	None:intergenic	80.0%
!	TGGAGGACCGCCGCAGGCGG+CGG	+	chr5.3:61112550-61112569	None:intergenic	80.0%
!!	AGCGGCGGTGGTGGCGAGGG+AGG	-	chr5.3:61113023-61113042	MS.gene009614:CDS	80.0%
!!!	TGGAGCACCGCCGCCTGCGG+CGG	-	chr5.3:61112540-61112559	MS.gene009614:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	61111620	61113305	61111620	ID=MS.gene009614
chr5.3	mRNA	61111620	61113305	61111620	ID=MS.gene009614.t1;Parent=MS.gene009614
chr5.3	exon	61111620	61113305	61111620	ID=MS.gene009614.t1.exon1;Parent=MS.gene009614.t1
chr5.3	CDS	61111620	61113305	61111620	ID=cds.MS.gene009614.t1;Parent=MS.gene009614.t1

Gene Sequence

>MS.gene009614

ATGGACCAACTAAAACCAACCCAAGCAAACAGCTCTCCACTCACCCCTCTCACCTTCTTAGAAAGGACCTCAACAATCTACCCCAACACACCTTCCATCATCTACAACGACACCGTTTTCACATGGTCTCAAACCCACCAACGATGCCTCCAACTTGCCTCCGCCATCACCTCCTTAGGTATCCGCCGTGGCAACGTCGTCTCCGTCATCGCTCCCAATATCCCCGCCATGTATGAACTCCACTTCGCCGTCCCCTTCACCGGCGCTATCCTTAACAACATCAACACGCGCCTTGACGCGCGTATCATCTCCAACATCCTCCTCCACTGTGAATCCAAACTCGTTTTCGTAGACATCGCCGCACGTGATCTTGTTCTCCAAGCTTTATCCTTATTCCCTTCAAAACAACATAAACCTCTCCTTATTCTCATCAAAGACCAAACATTTGAAACATACGAAAATGTTTCTTCATCTTCCACCGTTGATTTTATTTCAACTTACGAAGATCTAATGGCTTCCGGAGATCCAAATTTTAACTGGGTTTATCCAAACTCAGAGTGGGACCCAATGTTACTCAACTACACTTCCGGAACAACGTCGTCGCCAAAAGGTGTAGTTCATTCTCACCGTGGAACTTTCATCATAACCGTCGATTCATTAATCGAATGGACGGTTCCAAAACAACCGATTTATCTATGGACGCTACCTATGTTCCATGCTAACGGGTGGAGCTTCCCGTGGGGGATTGCAGCTGTTGGTGGAACAAACATCTGTGTAAGAAAATTCGACGCTGAAATTGTTTTTTCTCTCATCAGAAAACATCACGTGACACACATGTGCGGTGCTCCGGTGGTTCTCAATATGTTAACTAACTCACCTGATAATAAACCGTTGCAAAAAACTGTCCATATTTTAACAGCTGGAGCACCGCCGCCTGCGGCGGTCCTCCACCGGACAGAAGCTTTAGGGTTTACGGTAAGTCATGGTTATGGGCTAACGGAGACAGGTGGATTGGTGGTTTGTTGTACATGGAAGAAGAAATGGAACTTGTTGCCGGCGACTGAGAGAGCAAGGTTGAAGTCACGGCAAGGAGTGAGAACCCTAGGGATGACAAAGGTTGATGTAGTGGGTCCCAGTGGTGAGAGTGTAAAACGAGATGGAGCAACGCTTGGTGAAGTTGTTATGAGAGGTGGTTGTGTTATGTTAGGGTATTTGAAAGATAGTGAAGGAACAAAGAATTGTTTTAAGAAGGGTTGGTTTTACACTGGTGATGTAGGTGTAATGCATGAAGATGGGTATTTAGAGATTAAAGATAGGTCAAAAGATGTTATTATTAGTGGTGGTGAGAATTTGAGTAGTGTGGAGGTTGAGTCGGTTTTGTATGGACATCCGGCGGTGAATGAAGCGGCGGTGGTGGCGAGGGAGGATGAGTTTTGGGGGGAGACACCGTGTGCTTTTGTGAGTTTGAAAGAAGGGTTGAAGGAAAGGGAAATACCAACGGAGAAAGAGATATTTGAGTACTGTAGGAAGAATTTGCCGCATTATATGGTTCCAAAAACGGTGGTGTTTAAAGATGAACTTCCTAAGACTTCTACCGGGAAAATTCAGAAGTTTGTACTTAGAAAAATTGCTAAGGATATGGGACCACTTAGGAAGGATGCAGTAGTCACAAAAAGTCGTATGTGA

Protein sequence

>MS.gene009614.t1

MDQLKPTQANSSPLTPLTFLERTSTIYPNTPSIIYNDTVFTWSQTHQRCLQLASAITSLGIRRGNVVSVIAPNIPAMYELHFAVPFTGAILNNINTRLDARIISNILLHCESKLVFVDIAARDLVLQALSLFPSKQHKPLLILIKDQTFETYENVSSSSTVDFISTYEDLMASGDPNFNWVYPNSEWDPMLLNYTSGTTSSPKGVVHSHRGTFIITVDSLIEWTVPKQPIYLWTLPMFHANGWSFPWGIAAVGGTNICVRKFDAEIVFSLIRKHHVTHMCGAPVVLNMLTNSPDNKPLQKTVHILTAGAPPPAAVLHRTEALGFTVSHGYGLTETGGLVVCCTWKKKWNLLPATERARLKSRQGVRTLGMTKVDVVGPSGESVKRDGATLGEVVMRGGCVMLGYLKDSEGTKNCFKKGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVNEAAVVAREDEFWGETPCAFVSLKEGLKEREIPTEKEIFEYCRKNLPHYMVPKTVVFKDELPKTSTGKIQKFVLRKIAKDMGPLRKDAVVTKSRM