AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049797

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049797.t1 MTR_4g057730 77.716 543 29 3 1 452 1 542 0.0 809
MS.gene049797.t1 MTR_4g057730 75.372 471 25 2 1 380 1 471 0.0 680
MS.gene049797.t1 MTR_4g057730 84.712 399 23 1 1 361 1 399 0.0 671
MS.gene049797.t1 MTR_2g095510 58.932 543 128 5 1 452 1 539 0.0 602
MS.gene049797.t1 MTR_2g095510 60.553 398 116 3 1 360 1 395 4.00e-165 473
MS.gene049797.t1 MTR_1g063110 46.355 535 188 8 12 449 13 545 3.51e-147 431
MS.gene049797.t1 MTR_1g063120 45.120 543 187 8 12 449 13 549 6.97e-140 412
MS.gene049797.t1 MTR_1g026310 35.766 548 250 8 3 452 17 560 1.77e-97 304
MS.gene049797.t1 MTR_8g039720 35.805 553 243 10 4 452 15 559 1.46e-92 291
MS.gene049797.t1 MTR_1g090737 32.671 554 266 11 3 456 24 570 2.26e-91 288
MS.gene049797.t1 MTR_4g128337 32.895 532 257 9 11 447 17 543 2.02e-82 265
MS.gene049797.t1 MTR_2g105570 31.657 537 263 11 11 447 12 544 3.32e-79 256
MS.gene049797.t1 MTR_5g027480 32.407 540 260 10 2 444 16 547 8.19e-79 255
MS.gene049797.t1 MTR_5g007640 33.886 543 244 12 11 450 55 585 1.70e-78 255
MS.gene049797.t1 MTR_1g073180 34.100 522 223 12 26 447 29 529 1.93e-76 248
MS.gene049797.t1 MTR_3g088870 32.370 519 231 12 29 445 51 551 3.48e-74 243
MS.gene049797.t1 MTR_4g005750 31.028 535 263 11 11 447 11 537 4.56e-74 243
MS.gene049797.t1 MTR_5g027500 32.358 547 255 12 6 444 21 560 1.43e-73 242
MS.gene049797.t1 MTR_3g088880 31.262 515 239 10 29 445 52 549 2.28e-70 233
MS.gene049797.t1 MTR_4g077900 31.753 485 225 8 67 452 1 478 5.21e-68 225
MS.gene049797.t1 MTR_3g460770 26.930 531 282 9 21 454 22 543 1.85e-65 220
MS.gene049797.t1 MTR_1g026470 35.550 391 204 6 3 348 17 404 5.89e-65 215
MS.gene049797.t1 MTR_1g026430 35.567 388 202 6 3 345 17 401 2.95e-64 213
MS.gene049797.t1 MTR_1g073180 32.341 504 220 12 24 427 49 531 1.19e-62 212
MS.gene049797.t1 MTR_4g057755 47.170 159 42 7 222 379 1 118 2.50e-27 106
MS.gene049797.t1 MTR_3g035130 25.882 510 274 13 28 442 5 505 6.71e-27 113
MS.gene049797.t1 MTR_1g026350 41.791 134 75 2 3 135 17 148 5.44e-23 95.9
MS.gene049797.t1 MTR_3g035130 28.117 377 220 11 28 361 5 373 8.92e-20 92.0
MS.gene049797.t1 MTR_5g008820 22.921 541 282 16 27 450 14 536 2.52e-18 87.8
MS.gene049797.t1 MTR_3g064420 27.076 277 179 7 27 287 14 283 2.79e-18 87.8
MS.gene049797.t1 MTR_5g076220 23.708 561 272 17 23 450 10 547 1.60e-16 82.4
MS.gene049797.t1 MTR_5g008800 23.475 541 281 19 27 450 14 538 1.91e-15 79.0
MS.gene049797.t1 MTR_3g084470 26.160 237 135 9 42 248 90 316 2.77e-12 69.3
MS.gene049797.t1 MTR_0803s0020 24.324 296 200 9 7 293 214 494 5.56e-11 65.5
MS.gene049797.t1 MTR_8g074040 24.468 282 190 6 23 290 52 324 6.74e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049797.t1 AT4G05160 54.296 547 152 5 1 452 1 544 0.0 558
MS.gene049797.t1 AT1G20510 35.315 555 233 11 3 450 7 542 1.95e-93 293
MS.gene049797.t1 AT1G20500 35.018 554 240 11 3 452 13 550 9.72e-88 278
MS.gene049797.t1 AT5G38120 34.926 544 234 10 12 452 24 550 1.25e-84 270
MS.gene049797.t1 AT1G20480 34.054 555 250 11 2 452 23 565 1.41e-84 271
MS.gene049797.t1 AT4G19010 33.088 544 242 12 7 444 27 554 6.74e-81 261
MS.gene049797.t1 AT1G65060 32.961 537 249 11 11 447 34 559 6.57e-80 258
MS.gene049797.t1 AT3G21240 32.163 541 258 11 7 447 18 549 6.72e-78 253
MS.gene049797.t1 AT5G63380 33.333 543 240 15 10 444 22 550 2.97e-77 251
MS.gene049797.t1 AT1G51680 31.022 548 270 10 2 447 15 556 3.88e-74 243
MS.gene049797.t1 AT5G38120 33.136 507 220 9 12 415 24 514 5.75e-70 231
MS.gene049797.t1 AT1G62940 28.148 540 275 12 11 452 12 536 2.00e-65 220
MS.gene049797.t1 AT3G21230 30.347 547 268 11 7 447 24 563 3.29e-64 217
MS.gene049797.t1 AT1G51680 29.845 516 255 9 2 415 15 525 3.55e-64 216
MS.gene049797.t1 AT1G20510 31.959 485 205 10 3 380 7 473 7.02e-63 211
MS.gene049797.t1 AT1G20510 34.383 413 199 9 3 361 7 401 7.46e-63 211
MS.gene049797.t1 AT1G65060 33.584 399 208 9 11 362 34 422 3.83e-57 197
MS.gene049797.t1 AT3G21240 32.692 416 224 10 7 374 18 425 3.81e-55 191
MS.gene049797.t1 AT3G21240 32.692 416 224 10 7 374 18 425 3.81e-55 191
MS.gene049797.t1 AT5G38120 33.995 403 197 8 12 361 24 410 1.63e-54 189
MS.gene049797.t1 AT5G38120 33.995 403 197 8 12 361 24 410 1.63e-54 189
MS.gene049797.t1 AT3G21230 29.128 539 263 13 7 439 24 549 2.14e-54 191
MS.gene049797.t1 AT1G20490 33.496 409 206 11 3 359 13 407 3.11e-54 187
MS.gene049797.t1 AT1G20490 33.496 409 206 11 3 359 13 407 3.11e-54 187
MS.gene049797.t1 AT1G51680 31.540 409 226 8 2 361 15 418 5.89e-53 185
MS.gene049797.t1 AT3G21230 30.637 408 224 8 7 361 24 425 1.11e-44 162
MS.gene049797.t1 AT3G21230 30.637 408 224 9 7 361 24 425 2.41e-44 162
MS.gene049797.t1 AT3G48990 24.660 515 272 14 29 442 5 504 1.22e-22 100
MS.gene049797.t1 AT1G65890 24.048 578 273 23 23 453 10 568 8.15e-21 95.9
MS.gene049797.t1 AT1G77240 23.412 551 282 22 23 450 10 543 2.36e-19 91.3
MS.gene049797.t1 AT1G65880 24.653 288 195 7 23 295 10 290 1.89e-17 85.5
MS.gene049797.t1 AT1G68270 21.881 521 300 16 23 446 10 520 5.40e-17 84.0
MS.gene049797.t1 AT1G76290 26.370 292 200 8 27 310 14 298 1.45e-16 82.4
MS.gene049797.t1 AT1G66120 26.523 279 185 7 23 287 10 282 6.33e-15 77.4
MS.gene049797.t1 AT2G17650 21.416 565 304 18 12 448 45 597 1.32e-12 70.5
MS.gene049797.t1 AT3G23790 24.125 257 166 9 19 248 67 321 3.67e-12 68.9
MS.gene049797.t1 AT5G16340 21.519 553 295 22 23 451 10 547 7.75e-12 67.8
MS.gene049797.t1 AT1G21540 28.185 259 153 12 56 293 42 288 1.07e-11 67.4
MS.gene049797.t1 AT4G14070 25.439 228 145 9 42 247 112 336 4.32e-11 65.9

Find 112 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATTCTATCTTGTATTT+TGG 0.114739 4.2:+46026643 None:intergenic
TTCACTTTGCTCCATAATTC+AGG 0.226686 4.2:+46029693 None:intergenic
GGAGGTCTAGAGAAGGTCTT+AGG 0.226825 4.2:+46030051 None:intergenic
TCAGCTGGAATGTTGGTTTC+AGG 0.248160 4.2:-46028027 MS.gene049797:CDS
GTTGAGAGAAGGAGAGGGTT+TGG 0.278616 4.2:+46029937 None:intergenic
GAGGAGAGGTTTGGATTGTT+TGG 0.289366 4.2:+46030029 None:intergenic
TCCTGCAATTATCATCAATT+CGG 0.296505 4.2:-46029652 MS.gene049797:CDS
TTATCACTGTCCCTGAATTA+TGG 0.304163 4.2:-46029704 MS.gene049797:CDS
AATGGGGAGGTTTGAGTTAG+AGG 0.311979 4.2:-46028586 MS.gene049797:CDS
TTGAGAGAAGGAGAGGGTTT+GGG 0.319270 4.2:+46029938 None:intergenic
TTACCGATGTTTCATGTGTT+TGG 0.321450 4.2:-46028660 MS.gene049797:CDS
TTCAATCAACGCCTCAAAAC+TGG 0.343424 4.2:+46028878 None:intergenic
AGGAGAGGTTTGGATTGTTT+GGG 0.344237 4.2:+46030030 None:intergenic
AGAGTAGGTATTCGTCATTC+TGG 0.353545 4.2:-46028051 MS.gene049797:CDS
CCCGAATTGATGATAATTGC+AGG 0.355240 4.2:+46029651 None:intergenic
CCTGCAATTATCATCAATTC+GGG 0.363468 4.2:-46029651 MS.gene049797:intron
GCCACTCCCTCCAAAACAAT+TGG 0.363709 4.2:-46027968 MS.gene049797:CDS
TCTCTTTCAATGCAGAAATC+TGG 0.384408 4.2:-46030101 None:intergenic
GCCACCGATGATTCTTGCTT+TGG 0.397468 4.2:-46028514 MS.gene049797:CDS
GGGACAGTGATAACTAGTTT+AGG 0.399120 4.2:+46029714 None:intergenic
AATGAGACTGAGGAGAGGTT+TGG 0.399169 4.2:+46030020 None:intergenic
ACAGGAAACTGGATGTTGTT+GGG 0.406043 4.2:+46029834 None:intergenic
CCACTCCCTCCAAAACAATT+GGG 0.408832 4.2:-46027967 MS.gene049797:CDS
AGGAAGTACGGTGGTTTCAA+TGG 0.410372 4.2:-46028604 MS.gene049797:CDS
CTAGGAAACAGACAGGAAAC+TGG 0.411212 4.2:+46029823 None:intergenic
CATTTACCTTGCATCATGTT+GGG 0.414224 4.2:+46027925 None:intergenic
ACCTCACCAGCCTCATCATC+AGG 0.425444 4.2:+46027035 None:intergenic
TTCCTCGGACAGCGAACTGT+TGG 0.428772 4.2:+46026986 None:intergenic
TCCTCGGACAGCGAACTGTT+GGG 0.429184 4.2:+46026987 None:intergenic
ATTCGTCATTCTGGCTCAGC+TGG 0.439809 4.2:-46028042 MS.gene049797:CDS
TTCTGGCTCAGCTGGAATGT+TGG 0.451563 4.2:-46028034 MS.gene049797:CDS
CTGTACTCATCAGGAACAAC+AGG 0.452237 4.2:-46028792 MS.gene049797:CDS
GGAAGTACGGTGGTTTCAAT+GGG 0.453310 4.2:-46028603 MS.gene049797:CDS
AGTGTTCCTAAGACAGCTTC+AGG 0.454588 4.2:-46026704 MS.gene049797:CDS
AGTATAGAGTGACGAATTTG+TGG 0.460194 4.2:-46028542 MS.gene049797:CDS
TCACTTTGCTCCATAATTCA+GGG 0.464752 4.2:+46029694 None:intergenic
GAACGAACAACATAGGCAAT+TGG 0.465645 4.2:+46027011 None:intergenic
ATCTTGTGCTATTAGGGGTA+TGG 0.465740 4.2:-46028114 MS.gene049797:intron
AGAGGTTTGGATTGTTTGGG+AGG 0.469624 4.2:+46030033 None:intergenic
TTCCTAGCTGCCACCTCCAT+CGG 0.470662 4.2:-46029807 MS.gene049797:CDS
GAATGACGAATACCTACTCT+TGG 0.472314 4.2:+46028054 None:intergenic
GCGGCTTTGCTGTACTCATC+AGG 0.475013 4.2:-46028801 MS.gene049797:CDS
GTTTCATGTGTTTGGATTGG+CGG 0.478530 4.2:-46028652 MS.gene049797:CDS
CGCTGCGATGAAGTTCTTGT+GGG 0.486204 4.2:+46028746 None:intergenic
GACAGGAAACTGGATGTTGT+TGG 0.488377 4.2:+46029833 None:intergenic
AACATGGACGATGATTTAGC+AGG 0.490835 4.2:-46028711 MS.gene049797:CDS
ATGGGGAGGTTTGAGTTAGA+GGG 0.491844 4.2:-46028585 MS.gene049797:CDS
AGGGACCTGTATATTCCATC+TGG 0.491867 4.2:+46030071 None:intergenic
TTATAACATACGCGCAGCTA+AGG 0.495514 4.2:-46028629 MS.gene049797:CDS
TATCTGATAGGTAACGTAAC+GGG 0.496503 4.2:-46028918 MS.gene049797:intron
TCAGAAGTTTATTGCTAACC+AGG 0.499462 4.2:-46026958 MS.gene049797:intron
ACATTTACCTTGCATCATGT+TGG 0.510418 4.2:+46027924 None:intergenic
AGGAACAACAGGAGAGAGCA+AGG 0.512764 4.2:-46028781 MS.gene049797:CDS
GATGTTTCATGTGTTTGGAT+TGG 0.513148 4.2:-46028655 MS.gene049797:CDS
TCCTGATGATGAGGCTGGTG+AGG 0.518043 4.2:-46027036 MS.gene049797:CDS
CTAAAGATTTCCTGATGATG+AGG 0.519902 4.2:-46027045 MS.gene049797:intron
AAACTTCTGAATTTCTTCCT+CGG 0.530812 4.2:+46026971 None:intergenic
GCTCACAGTTTACTCAACCT+TGG 0.534615 4.2:-46029891 MS.gene049797:CDS
TTTGAGTTGAGAGAAGGAGA+GGG 0.536638 4.2:+46029932 None:intergenic
GGAAGAGTCTGCGTCGATGA+GGG 0.545519 4.2:+46029959 None:intergenic
CCGCTGCGATGAAGTTCTTG+TGG 0.545678 4.2:+46028745 None:intergenic
CAGGAAACTGGATGTTGTTG+GGG 0.547944 4.2:+46029835 None:intergenic
ATAGTCCAGATGGAATATAC+AGG 0.549923 4.2:-46030076 MS.gene049797:CDS
GTATAGAGTGACGAATTTGT+GGG 0.551602 4.2:-46028541 MS.gene049797:CDS
GAGGCGTTGATTGAATCAGC+AGG 0.553384 4.2:-46028870 MS.gene049797:CDS
AGATTTCCTGATGATGAGGC+TGG 0.559057 4.2:-46027041 MS.gene049797:CDS
AAATCTGGTTATAGTCCAGA+TGG 0.559141 4.2:-46030086 MS.gene049797:CDS
ACATGGACGATGATTTAGCA+GGG 0.561737 4.2:-46028710 MS.gene049797:CDS
GCAGCTAAGGAGAGGAAGTA+CGG 0.565977 4.2:-46028616 MS.gene049797:CDS
CACCGATGGAGGTGGCAGCT+AGG 0.571967 4.2:+46029805 None:intergenic
GGGAAGAGTCTGCGTCGATG+AGG 0.577257 4.2:+46029958 None:intergenic
CACTCCCTCCAAAACAATTG+GGG 0.578348 4.2:-46027966 MS.gene049797:CDS
CGAAGCTCAAATAGTGAGTG+TGG 0.579940 4.2:-46028001 MS.gene049797:CDS
AGCTCCGCAACGGTGTAAAG+AGG 0.580041 4.2:+46029762 None:intergenic
ACCCAACAGTTCGCTGTCCG+AGG 0.582426 4.2:-46026988 MS.gene049797:CDS
TTATCTGATAGGTAACGTAA+CGG 0.583069 4.2:-46028919 MS.gene049797:intron
GTTGGGTGAACGAACAACAT+AGG 0.583728 4.2:+46027004 None:intergenic
GAGGTCTAGAGAAGGTCTTA+GGG 0.584498 4.2:+46030052 None:intergenic
AAGAGGAGACACTTGTGAAG+AGG 0.595466 4.2:+46029997 None:intergenic
GACTATTGCACCGATGGAGG+TGG 0.596107 4.2:+46029797 None:intergenic
TTCGCCAAAGCAAGAATCAT+CGG 0.605055 4.2:+46028510 None:intergenic
AGTGATAACTAGTTTAGGAT+CGG 0.607330 4.2:+46029719 None:intergenic
GCCCACTCAAAAGATTGCGA+AGG 0.609714 4.2:-46026742 MS.gene049797:CDS
AGAGGAATGAGACTGAGGAG+AGG 0.610234 4.2:+46030015 None:intergenic
GTGGCAGCTAGGAAACAGAC+AGG 0.611923 4.2:+46029816 None:intergenic
AAATCCTCTTTACACCGTTG+CGG 0.617647 4.2:-46029766 MS.gene049797:CDS
GTACGGTGGTTTCAATGGGG+AGG 0.625711 4.2:-46028599 MS.gene049797:CDS
CCCACTCAAAAGATTGCGAA+GGG 0.627536 4.2:-46026741 MS.gene049797:CDS
TTGTTTAGAGAGCTCCGCAA+CGG 0.628130 4.2:+46029752 None:intergenic
TTTCAGAGTGAGAAACGAGA+AGG 0.633065 4.2:+46027250 None:intergenic
CAAGGTCCCAACATGATGCA+AGG 0.635220 4.2:-46027931 MS.gene049797:intron
AGAGTCTGCGTCGATGAGGG+CGG 0.635882 4.2:+46029962 None:intergenic
GGAACAACAGGAGAGAGCAA+GGG 0.638442 4.2:-46028780 MS.gene049797:CDS
TCTATCGAGAATCCAAGAGT+AGG 0.639153 4.2:-46028066 MS.gene049797:CDS
TGCTTTGGCGAAACAGAGTG+TGG 0.643161 4.2:-46028499 MS.gene049797:intron
TTGTTTGGGAGGTCTAGAGA+AGG 0.651428 4.2:+46030044 None:intergenic
CATGGACGATGATTTAGCAG+GGG 0.652854 4.2:-46028709 MS.gene049797:CDS
ACATACGCGCAGCTAAGGAG+AGG 0.659076 4.2:-46028624 MS.gene049797:CDS
ACTCCCTCCAAAACAATTGG+GGG 0.667004 4.2:-46027965 MS.gene049797:CDS
AATCCAAACACATGAAACAT+CGG 0.667167 4.2:+46028657 None:intergenic
GGTGACTATTGCACCGATGG+AGG 0.673270 4.2:+46029794 None:intergenic
AGTGGTGACTATTGCACCGA+TGG 0.675842 4.2:+46029791 None:intergenic
TGGATTCTCGATAGAAACAA+CGG 0.681308 4.2:+46028074 None:intergenic
TGTGAAGAGGAATGAGACTG+AGG 0.688626 4.2:+46030010 None:intergenic
GCCAAAGCAAGAATCATCGG+TGG 0.703214 4.2:+46028513 None:intergenic
AGCGGCGTTAATGATTAACA+TGG 0.703668 4.2:-46028727 MS.gene049797:CDS
TGTGAAACAAAGCGATACAG+CGG 0.712100 4.2:-46028820 MS.gene049797:CDS
GAAGTACGGTGGTTTCAATG+GGG 0.715971 4.2:-46028602 MS.gene049797:CDS
AGGAAACTGGATGTTGTTGG+GGG 0.723943 4.2:+46029836 None:intergenic
CCACAAGAACTTCATCGCAG+CGG 0.725068 4.2:-46028745 MS.gene049797:CDS
GGTGTAAAGAGGATTTGCAG+TGG 0.728663 4.2:+46029773 None:intergenic
GCTAAGGAGAGGAAGTACGG+TGG 0.774505 4.2:-46028613 MS.gene049797:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTTATTAATTTATAAGT+TGG - chr4.2:46028515-46028534 MS.gene049797:CDS 10.0%
!! ACACATAAAGAATAATAATT+TGG + chr4.2:46029312-46029331 None:intergenic 15.0%
!! ACATAAAGAATAATAATTTG+GGG + chr4.2:46029310-46029329 None:intergenic 15.0%
!! CACATAAAGAATAATAATTT+GGG + chr4.2:46029311-46029330 None:intergenic 15.0%
!!! AAAGGAAAAAAAGTTTTTTT+TGG + chr4.2:46027346-46027365 None:intergenic 15.0%
!!! AAGGAAAAAAAGTTTTTTTT+GGG + chr4.2:46027345-46027364 None:intergenic 15.0%
!!! TGATTAAAATCTGTAATTTT+TGG - chr4.2:46028438-46028457 MS.gene049797:intron 15.0%
!!! TTATATCTTTGCTATATAAT+TGG - chr4.2:46029130-46029149 MS.gene049797:intron 15.0%
!! AATAGATATGTACATCTAAA+CGG + chr4.2:46027577-46027596 None:intergenic 20.0%
!! ATAACCTGAAATATTTGAAT+AGG + chr4.2:46029240-46029259 None:intergenic 20.0%
!! TTAAATAGCTATCTTTAATC+CGG + chr4.2:46028407-46028426 None:intergenic 20.0%
!!! AATTATTTGAAAGCATGAAA+AGG + chr4.2:46029021-46029040 None:intergenic 20.0%
!!! GAAAATGATTATTTTTGACA+AGG - chr4.2:46029382-46029401 MS.gene049797:intron 20.0%
!!! GTTTTACTTAATGTAAAAGT+TGG - chr4.2:46029172-46029191 MS.gene049797:intron 20.0%
!!! TAACTTTTCAATATAGTAGA+TGG - chr4.2:46027488-46027507 MS.gene049797:intron 20.0%
!!! TAAGAAACTTTTTATCTGAT+AGG - chr4.2:46027790-46027809 MS.gene049797:intron 20.0%
!!! TCATTTTTATACACGTTTAT+AGG - chr4.2:46029949-46029968 MS.gene049797:CDS 20.0%
!!! TGATGATAATGTTTTACTTA+CGG + chr4.2:46029516-46029535 None:intergenic 20.0%
!!! TTGAATGAAACTGTTTTTAA+TGG - chr4.2:46029873-46029892 MS.gene049797:CDS 20.0%
! AAAACAAACTTTAGATAGTG+AGG - chr4.2:46029280-46029299 MS.gene049797:intron 25.0%
! AAACAAACTTTAGATAGTGA+GGG - chr4.2:46029281-46029300 MS.gene049797:intron 25.0%
! AGATACAAAGTTAGTTAGAT+TGG - chr4.2:46027099-46027118 MS.gene049797:intron 25.0%
! ATTGTTAGAGAAATGTCAAT+TGG + chr4.2:46029631-46029650 None:intergenic 25.0%
! TGAAGGAATTTAGAAAGAAA+GGG - chr4.2:46028842-46028861 MS.gene049797:CDS 25.0%
! TTAGTATAACTATAACCAAC+TGG + chr4.2:46027182-46027201 None:intergenic 25.0%
! TTCTCCTATTCAAATATTTC+AGG - chr4.2:46029233-46029252 MS.gene049797:intron 25.0%
! TTGAAGGAATTTAGAAAGAA+AGG - chr4.2:46028841-46028860 MS.gene049797:CDS 25.0%
!! ATTGATTATCTTGTGCTATT+AGG - chr4.2:46028599-46028618 MS.gene049797:CDS 25.0%
!! ATTTTCACACATACAACAAA+AGG + chr4.2:46029368-46029387 None:intergenic 25.0%
!! TTGATTATCTTGTGCTATTA+GGG - chr4.2:46028600-46028619 MS.gene049797:CDS 25.0%
!! TTGCATTCTATCTTGTATTT+TGG + chr4.2:46030080-46030099 None:intergenic 25.0%
!! TTTTCACACATACAACAAAA+GGG + chr4.2:46029367-46029386 None:intergenic 25.0%
!!! AATGAAACTGTTTTTAATGG+TGG - chr4.2:46029876-46029895 MS.gene049797:CDS 25.0%
!!! GATGATAATGTTTTACTTAC+GGG + chr4.2:46029515-46029534 None:intergenic 25.0%
!!! TTGTCTCTTTGAAATTAACA+AGG - chr4.2:46029425-46029444 MS.gene049797:intron 25.0%
AAACTTCTGAATTTCTTCCT+CGG + chr4.2:46029752-46029771 None:intergenic 30.0%
AACAAACTTTAGATAGTGAG+GGG - chr4.2:46029282-46029301 MS.gene049797:intron 30.0%
AATCCAAACACATGAAACAT+CGG + chr4.2:46028066-46028085 None:intergenic 30.0%
AATTAGCTGTTCTCATCATT+TGG - chr4.2:46027763-46027782 MS.gene049797:intron 30.0%
ACCATATAAATATACCGTGA+TGG - chr4.2:46029589-46029608 MS.gene049797:intron 30.0%
AGATACAACTAAAACAGTGT+TGG + chr4.2:46029099-46029118 None:intergenic 30.0%
AGGTTATTGTAACAATCAAG+AGG - chr4.2:46029253-46029272 MS.gene049797:intron 30.0%
AGTAGTTATGATCAATGAAG+AGG - chr4.2:46027434-46027453 MS.gene049797:intron 30.0%
GAACAACTAACTTATAAGCA+AGG + chr4.2:46027693-46027712 None:intergenic 30.0%
GTTTATCTCATTTGGATGAT+TGG - chr4.2:46029902-46029921 MS.gene049797:CDS 30.0%
TCCATCACGGTATATTTATA+TGG + chr4.2:46029593-46029612 None:intergenic 30.0%
TCCTGCAATTATCATCAATT+CGG - chr4.2:46027068-46027087 MS.gene049797:intron 30.0%
TGAATAGGAGAAGTTTCATA+TGG + chr4.2:46029225-46029244 None:intergenic 30.0%
TTATCATCACTTGTAACAGT+TGG - chr4.2:46029527-46029546 MS.gene049797:intron 30.0%
TTATCTGATAGGTAACGTAA+CGG - chr4.2:46027801-46027820 MS.gene049797:intron 30.0%
! AGTGATAACTAGTTTAGGAT+CGG + chr4.2:46027004-46027023 None:intergenic 30.0%
! GATTGGTTAGTTATAGTTAC+TGG - chr4.2:46027116-46027135 MS.gene049797:intron 30.0%
! TGATTATCTTGTGCTATTAG+GGG - chr4.2:46028601-46028620 MS.gene049797:CDS 30.0%
! TTTCTTCGTTGTAGAGTATT+GGG - chr4.2:46028259-46028278 MS.gene049797:intron 30.0%
!! TAAATCATTTTTAACCCAGC+TGG + chr4.2:46028569-46028588 None:intergenic 30.0%
!! TGGAGATAAAACTTGTTACT+TGG + chr4.2:46029798-46029817 None:intergenic 30.0%
AAATCTGGTTATAGTCCAGA+TGG - chr4.2:46026634-46026653 MS.gene049797:CDS 35.0%
ACATTTACCTTGCATCATGT+TGG + chr4.2:46028799-46028818 None:intergenic 35.0%
ACCTTTCTATCAAGATCAGT+CGG - chr4.2:46028380-46028399 MS.gene049797:intron 35.0%
AGACAATGATCAGACAGTTA+GGG - chr4.2:46028327-46028346 MS.gene049797:intron 35.0%
AGTATAGAGTGACGAATTTG+TGG - chr4.2:46028178-46028197 MS.gene049797:intron 35.0%
ATAGTCCAGATGGAATATAC+AGG - chr4.2:46026644-46026663 MS.gene049797:CDS 35.0%
CAAGTTATCTAGCGAATGAT+GGG + chr4.2:46027715-46027734 None:intergenic 35.0%
CATTGATGCATTCAGATCAT+TGG + chr4.2:46028489-46028508 None:intergenic 35.0%
CATTTACCTTGCATCATGTT+GGG + chr4.2:46028798-46028817 None:intergenic 35.0%
CCTGCAATTATCATCAATTC+GGG - chr4.2:46027069-46027088 MS.gene049797:intron 35.0%
GAATGTTGATCTTGATCAGA+CGG - chr4.2:46028460-46028479 MS.gene049797:intron 35.0%
GATAGAAAGGTTACTGATGT+CGG + chr4.2:46028371-46028390 None:intergenic 35.0%
GATGTTTCATGTGTTTGGAT+TGG - chr4.2:46028065-46028084 MS.gene049797:CDS 35.0%
GTAAAAGTTTGTCGAAGCAA+AGG + chr4.2:46027364-46027383 None:intergenic 35.0%
GTATAGAGTGACGAATTTGT+GGG - chr4.2:46028179-46028198 MS.gene049797:intron 35.0%
GTTTCTTCGTTGTAGAGTAT+TGG - chr4.2:46028258-46028277 MS.gene049797:intron 35.0%
TACAAGTCACTAGAGTACAA+TGG - chr4.2:46029073-46029092 MS.gene049797:intron 35.0%
TACATCTAAACGGAGCAATT+TGG + chr4.2:46027567-46027586 None:intergenic 35.0%
TAGACAATGATCAGACAGTT+AGG - chr4.2:46028326-46028345 MS.gene049797:intron 35.0%
TAGTCCAACTGTAACTAACT+GGG + chr4.2:46027744-46027763 None:intergenic 35.0%
TATCTGATAGGTAACGTAAC+GGG - chr4.2:46027802-46027821 MS.gene049797:intron 35.0%
TCAAGTTATCTAGCGAATGA+TGG + chr4.2:46027716-46027735 None:intergenic 35.0%
TCACTTTGCTCCATAATTCA+GGG + chr4.2:46027029-46027048 None:intergenic 35.0%
TCAGAAGTTTATTGCTAACC+AGG - chr4.2:46029762-46029781 MS.gene049797:CDS 35.0%
TGGATTCTCGATAGAAACAA+CGG + chr4.2:46028649-46028668 None:intergenic 35.0%
TTACCGATGTTTCATGTGTT+TGG - chr4.2:46028060-46028079 MS.gene049797:CDS 35.0%
TTAGTCCAACTGTAACTAAC+TGG + chr4.2:46027745-46027764 None:intergenic 35.0%
TTATCACTGTCCCTGAATTA+TGG - chr4.2:46027016-46027035 MS.gene049797:CDS 35.0%
TTCACTTTGCTCCATAATTC+AGG + chr4.2:46027030-46027049 None:intergenic 35.0%
! AGTGTTGTTGTTATGCTTGA+AGG - chr4.2:46028825-46028844 MS.gene049797:CDS 35.0%
! ATTTTTCCTGAAGCTGTCTT+AGG + chr4.2:46030025-46030044 None:intergenic 35.0%
! CATATTTCCCCCAATTGTTT+TGG + chr4.2:46028765-46028784 None:intergenic 35.0%
! CATTGCATTGATCCTATTTG+GGG - chr4.2:46028541-46028560 MS.gene049797:CDS 35.0%
! CTAAAGATTTCCTGATGATG+AGG - chr4.2:46029675-46029694 MS.gene049797:CDS 35.0%
! GCATTGCATTGATCCTATTT+GGG - chr4.2:46028540-46028559 MS.gene049797:CDS 35.0%
! TGCATTGCATTGATCCTATT+TGG - chr4.2:46028539-46028558 MS.gene049797:CDS 35.0%
! TGTTGTAACTTGTAAGTGCA+TGG + chr4.2:46029818-46029837 None:intergenic 35.0%
!! CTTTGTTTCACATCGTTTTC+TGG + chr4.2:46027892-46027911 None:intergenic 35.0%
!!! CGTCGTTTTTATTTATGCCA+AGG + chr4.2:46026849-46026868 None:intergenic 35.0%
!!! TGAGTTAGAGGGTTTTTTGA+AGG - chr4.2:46028146-46028165 MS.gene049797:intron 35.0%
!!! TTGTGTTTTGAGTTGAGAGA+AGG + chr4.2:46026797-46026816 None:intergenic 35.0%
AAATCCTCTTTACACCGTTG+CGG - chr4.2:46026954-46026973 MS.gene049797:intron 40.0%
AACATGGACGATGATTTAGC+AGG - chr4.2:46028009-46028028 MS.gene049797:CDS 40.0%
AAGAAAGGGACTTGCATTCT+TGG - chr4.2:46028856-46028875 MS.gene049797:CDS 40.0%
ACAGGAAACTGGATGTTGTT+GGG + chr4.2:46026889-46026908 None:intergenic 40.0%
ACATGGACGATGATTTAGCA+GGG - chr4.2:46028010-46028029 MS.gene049797:CDS 40.0%
ACCGACTGATCTTGATAGAA+AGG + chr4.2:46028384-46028403 None:intergenic 40.0%
AGAGTAGGTATTCGTCATTC+TGG - chr4.2:46028669-46028688 MS.gene049797:CDS 40.0%
AGCGGCGTTAATGATTAACA+TGG - chr4.2:46027993-46028012 MS.gene049797:CDS 40.0%
AGGAGAGGTTTGGATTGTTT+GGG + chr4.2:46026693-46026712 None:intergenic 40.0%
CTCAACAGAAGAAGTTGCAT+TGG + chr4.2:46028969-46028988 None:intergenic 40.0%
CTCTGACATTAAGTGTGTCT+CGG - chr4.2:46027266-46027285 MS.gene049797:intron 40.0%
GAACGAACAACATAGGCAAT+TGG + chr4.2:46029712-46029731 None:intergenic 40.0%
GAATGACGAATACCTACTCT+TGG + chr4.2:46028669-46028688 None:intergenic 40.0%
GACACTTCTACGAGGTTTAA+AGG - chr4.2:46027403-46027422 MS.gene049797:intron 40.0%
GGTGGTCAGTTTATCTCATT+TGG - chr4.2:46029894-46029913 MS.gene049797:CDS 40.0%
TATAAGCAAGGACTCTGACT+CGG + chr4.2:46027681-46027700 None:intergenic 40.0%
TCCATTAATTCCTTCCCAAG+AGG + chr4.2:46028297-46028316 None:intergenic 40.0%
TCCTCTTGGGAAGGAATTAA+TGG - chr4.2:46028293-46028312 MS.gene049797:intron 40.0%
TCTATCGAGAATCCAAGAGT+AGG - chr4.2:46028654-46028673 MS.gene049797:CDS 40.0%
TCTTGGGAAGGAATTAATGG+AGG - chr4.2:46028296-46028315 MS.gene049797:intron 40.0%
TGTGAAACAAAGCGATACAG+CGG - chr4.2:46027900-46027919 MS.gene049797:intron 40.0%
TGTTCCCAGTTAGTTACAGT+TGG - chr4.2:46027737-46027756 MS.gene049797:intron 40.0%
TTATAACATACGCGCAGCTA+AGG - chr4.2:46028091-46028110 MS.gene049797:CDS 40.0%
TTCAATCAACGCCTCAAAAC+TGG + chr4.2:46027845-46027864 None:intergenic 40.0%
TTCACTATACTGCTACCAGT+TGG - chr4.2:46027164-46027183 MS.gene049797:intron 40.0%
TTCGCCAAAGCAAGAATCAT+CGG + chr4.2:46028213-46028232 None:intergenic 40.0%
TTTCAGAGTGAGAAACGAGA+AGG + chr4.2:46029473-46029492 None:intergenic 40.0%
! AAGTGTCTGAGATGTGTCTA+AGG + chr4.2:46027390-46027409 None:intergenic 40.0%
! AGTGTCTGAGATGTGTCTAA+GGG + chr4.2:46027389-46027408 None:intergenic 40.0%
! ATCTTGTGCTATTAGGGGTA+TGG - chr4.2:46028606-46028625 MS.gene049797:CDS 40.0%
! CCCGAATTGATGATAATTGC+AGG + chr4.2:46027072-46027091 None:intergenic 40.0%
! GGGACAGTGATAACTAGTTT+AGG + chr4.2:46027009-46027028 None:intergenic 40.0%
! GTGACTTGTACAAGTAAGTG+TGG + chr4.2:46029063-46029082 None:intergenic 40.0%
! GTTTCATGTGTTTGGATTGG+CGG - chr4.2:46028068-46028087 MS.gene049797:CDS 40.0%
! TTCAAACTTCGCCAGTTTTG+AGG - chr4.2:46027831-46027850 MS.gene049797:intron 40.0%
!! AACAGTTTTGTCGTCCATCA+CGG + chr4.2:46029606-46029625 None:intergenic 40.0%
!! TTACTTGGCTTTTTCTCACC+TGG + chr4.2:46029783-46029802 None:intergenic 40.0%
!! TTTGAGTTGAGAGAAGGAGA+GGG + chr4.2:46026791-46026810 None:intergenic 40.0%
!!! ATTTCCCCCAATTGTTTTGG+AGG + chr4.2:46028762-46028781 None:intergenic 40.0%
!!! TTTCCCCCAATTGTTTTGGA+GGG + chr4.2:46028761-46028780 None:intergenic 40.0%
!!! TTTTGAGTTGAGAGAAGGAG+AGG + chr4.2:46026792-46026811 None:intergenic 40.0%
AAGAGGAGACACTTGTGAAG+AGG + chr4.2:46026726-46026745 None:intergenic 45.0%
AATGAGACTGAGGAGAGGTT+TGG + chr4.2:46026703-46026722 None:intergenic 45.0%
ACATCTCAGACACTTCTACG+AGG - chr4.2:46027395-46027414 MS.gene049797:intron 45.0%
ACTCCCTCCAAAACAATTGG+GGG - chr4.2:46028755-46028774 MS.gene049797:CDS 45.0%
AGAGGTTTGGATTGTTTGGG+AGG + chr4.2:46026690-46026709 None:intergenic 45.0%
AGGAAACTGGATGTTGTTGG+GGG + chr4.2:46026887-46026906 None:intergenic 45.0%
AGGGACCTGTATATTCCATC+TGG + chr4.2:46026652-46026671 None:intergenic 45.0%
AGTGTTCCTAAGACAGCTTC+AGG - chr4.2:46030016-46030035 MS.gene049797:CDS 45.0%
CACTCCCTCCAAAACAATTG+GGG - chr4.2:46028754-46028773 MS.gene049797:CDS 45.0%
CAGGAAACTGGATGTTGTTG+GGG + chr4.2:46026888-46026907 None:intergenic 45.0%
CATGGACGATGATTTAGCAG+GGG - chr4.2:46028011-46028030 MS.gene049797:CDS 45.0%
CCACTCCCTCCAAAACAATT+GGG - chr4.2:46028753-46028772 MS.gene049797:CDS 45.0%
CCCACTCAAAAGATTGCGAA+GGG - chr4.2:46029979-46029998 MS.gene049797:CDS 45.0%
CGAAGCTCAAATAGTGAGTG+TGG - chr4.2:46028719-46028738 MS.gene049797:CDS 45.0%
CTAGGAAACAGACAGGAAAC+TGG + chr4.2:46026900-46026919 None:intergenic 45.0%
CTGTACTCATCAGGAACAAC+AGG - chr4.2:46027928-46027947 MS.gene049797:intron 45.0%
GAAGTACGGTGGTTTCAATG+GGG - chr4.2:46028118-46028137 MS.gene049797:intron 45.0%
GACACGTGTCATACAAGTGT+TGG + chr4.2:46027312-46027331 None:intergenic 45.0%
GACAGGAAACTGGATGTTGT+TGG + chr4.2:46026890-46026909 None:intergenic 45.0%
GAGGAGAGGTTTGGATTGTT+TGG + chr4.2:46026694-46026713 None:intergenic 45.0%
GAGGTCTAGAGAAGGTCTTA+GGG + chr4.2:46026671-46026690 None:intergenic 45.0%
GCTCACAGTTTACTCAACCT+TGG - chr4.2:46026829-46026848 MS.gene049797:intron 45.0%
GGTGTAAAGAGGATTTGCAG+TGG + chr4.2:46026950-46026969 None:intergenic 45.0%
GTTGGGTGAACGAACAACAT+AGG + chr4.2:46029719-46029738 None:intergenic 45.0%
TCTATCAAGATCAGTCGGTC+CGG - chr4.2:46028385-46028404 MS.gene049797:intron 45.0%
TGTGAAGAGGAATGAGACTG+AGG + chr4.2:46026713-46026732 None:intergenic 45.0%
TTGAGAGAAGGAGAGGGTTT+GGG + chr4.2:46026785-46026804 None:intergenic 45.0%
TTGGGGGAAATATGCGTACA+AGG - chr4.2:46028771-46028790 MS.gene049797:CDS 45.0%
TTGTTTAGAGAGCTCCGCAA+CGG + chr4.2:46026971-46026990 None:intergenic 45.0%
TTGTTTGGGAGGTCTAGAGA+AGG + chr4.2:46026679-46026698 None:intergenic 45.0%
! AATGGGGAGGTTTGAGTTAG+AGG - chr4.2:46028134-46028153 MS.gene049797:intron 45.0%
! ACCCTTCGCAATCTTTTGAG+TGG + chr4.2:46029983-46030002 None:intergenic 45.0%
! AGAAGGTCTTCAAGTTCTGC+TGG + chr4.2:46029456-46029475 None:intergenic 45.0%
! AGATTTCCTGATGATGAGGC+TGG - chr4.2:46029679-46029698 MS.gene049797:CDS 45.0%
! AGGAAGTACGGTGGTTTCAA+TGG - chr4.2:46028116-46028135 MS.gene049797:intron 45.0%
! ATGGGGAGGTTTGAGTTAGA+GGG - chr4.2:46028135-46028154 MS.gene049797:intron 45.0%
! GGAAGTACGGTGGTTTCAAT+GGG - chr4.2:46028117-46028136 MS.gene049797:intron 45.0%
! GTGTCTGAGATGTGTCTAAG+GGG + chr4.2:46027388-46027407 None:intergenic 45.0%
!! CCCTTCGCAATCTTTTGAGT+GGG + chr4.2:46029982-46030001 None:intergenic 45.0%
!! TCAGCTGGAATGTTGGTTTC+AGG - chr4.2:46028693-46028712 MS.gene049797:CDS 45.0%
!! TCGTTGTAGAGTATTGGGTC+TGG - chr4.2:46028264-46028283 MS.gene049797:intron 45.0%
AGAGGAATGAGACTGAGGAG+AGG + chr4.2:46026708-46026727 None:intergenic 50.0%
AGGAACAACAGGAGAGAGCA+AGG - chr4.2:46027939-46027958 MS.gene049797:CDS 50.0%
AGTGGTGACTATTGCACCGA+TGG + chr4.2:46026932-46026951 None:intergenic 50.0%
CAAGGTCCCAACATGATGCA+AGG - chr4.2:46028789-46028808 MS.gene049797:CDS 50.0%
CCACAAGAACTTCATCGCAG+CGG - chr4.2:46027975-46027994 MS.gene049797:CDS 50.0%
CGCTGCGATGAAGTTCTTGT+GGG + chr4.2:46027977-46027996 None:intergenic 50.0%
GCAGCTAAGGAGAGGAAGTA+CGG - chr4.2:46028104-46028123 MS.gene049797:intron 50.0%
GCCAAAGCAAGAATCATCGG+TGG + chr4.2:46028210-46028229 None:intergenic 50.0%
GCCACCGATGATTCTTGCTT+TGG - chr4.2:46028206-46028225 MS.gene049797:intron 50.0%
GCCACTCCCTCCAAAACAAT+TGG - chr4.2:46028752-46028771 MS.gene049797:CDS 50.0%
GCCCACTCAAAAGATTGCGA+AGG - chr4.2:46029978-46029997 MS.gene049797:CDS 50.0%
GGAACAACAGGAGAGAGCAA+GGG - chr4.2:46027940-46027959 MS.gene049797:CDS 50.0%
GGAGGTCTAGAGAAGGTCTT+AGG + chr4.2:46026672-46026691 None:intergenic 50.0%
GTTGAGAGAAGGAGAGGGTT+TGG + chr4.2:46026786-46026805 None:intergenic 50.0%
TGCTTTGGCGAAACAGAGTG+TGG - chr4.2:46028221-46028240 MS.gene049797:intron 50.0%
TGGCGAAACAGAGTGTGGTT+GGG - chr4.2:46028226-46028245 MS.gene049797:intron 50.0%
TTGGCGAAACAGAGTGTGGT+TGG - chr4.2:46028225-46028244 MS.gene049797:intron 50.0%
!! ATTCGTCATTCTGGCTCAGC+TGG - chr4.2:46028678-46028697 MS.gene049797:CDS 50.0%
!! GAGGCGTTGATTGAATCAGC+AGG - chr4.2:46027850-46027869 MS.gene049797:intron 50.0%
!! TTCTGGCTCAGCTGGAATGT+TGG - chr4.2:46028686-46028705 MS.gene049797:CDS 50.0%
!!! CCCAATTGTTTTGGAGGGAG+TGG + chr4.2:46028756-46028775 None:intergenic 50.0%
!!! GGCGGTTTTGTTGAGAGAAG+AGG + chr4.2:46026743-46026762 None:intergenic 50.0%
ACATACGCGCAGCTAAGGAG+AGG - chr4.2:46028096-46028115 MS.gene049797:CDS 55.0%
ACCTCACCAGCCTCATCATC+AGG + chr4.2:46029688-46029707 None:intergenic 55.0%
ACTGGATGTTGTTGGGGGAG+AGG + chr4.2:46026882-46026901 None:intergenic 55.0%
AGCTCCGCAACGGTGTAAAG+AGG + chr4.2:46026961-46026980 None:intergenic 55.0%
CCGCTGCGATGAAGTTCTTG+TGG + chr4.2:46027978-46027997 None:intergenic 55.0%
GTACGGTGGTTTCAATGGGG+AGG - chr4.2:46028121-46028140 MS.gene049797:intron 55.0%
GTGGCAGCTAGGAAACAGAC+AGG + chr4.2:46026907-46026926 None:intergenic 55.0%
TCCTCGGACAGCGAACTGTT+GGG + chr4.2:46029736-46029755 None:intergenic 55.0%
TGTTGTTGGGGGAGAGGATG+AGG + chr4.2:46026876-46026895 None:intergenic 55.0%
TTCCTAGCTGCCACCTCCAT+CGG - chr4.2:46026913-46026932 MS.gene049797:intron 55.0%
TTCCTCGGACAGCGAACTGT+TGG + chr4.2:46029737-46029756 None:intergenic 55.0%
! ATCCTATTTGGGGCACCAGC+TGG - chr4.2:46028551-46028570 MS.gene049797:CDS 55.0%
! GACTATTGCACCGATGGAGG+TGG + chr4.2:46026926-46026945 None:intergenic 55.0%
! GCGGCTTTGCTGTACTCATC+AGG - chr4.2:46027919-46027938 MS.gene049797:intron 55.0%
! GCTAAGGAGAGGAAGTACGG+TGG - chr4.2:46028107-46028126 MS.gene049797:intron 55.0%
! GGAAGAGTCTGCGTCGATGA+GGG + chr4.2:46026764-46026783 None:intergenic 55.0%
! GGTGACTATTGCACCGATGG+AGG + chr4.2:46026929-46026948 None:intergenic 55.0%
! TCCTATTTGGGGCACCAGCT+GGG - chr4.2:46028552-46028571 MS.gene049797:CDS 55.0%
! TCCTGATGATGAGGCTGGTG+AGG - chr4.2:46029684-46029703 MS.gene049797:CDS 55.0%
ACCCAACAGTTCGCTGTCCG+AGG - chr4.2:46029732-46029751 MS.gene049797:CDS 60.0%
ACCCAGCTGGTGCCCCAAAT+AGG + chr4.2:46028556-46028575 None:intergenic 60.0%
! AGAGTCTGCGTCGATGAGGG+CGG + chr4.2:46026761-46026780 None:intergenic 60.0%
! GGGAAGAGTCTGCGTCGATG+AGG + chr4.2:46026765-46026784 None:intergenic 60.0%
!! GGTCTGGTGCTGCTCCTCTT+GGG - chr4.2:46028280-46028299 MS.gene049797:intron 60.0%
!! TGGTGCTGCTCCTCTTGGGA+AGG - chr4.2:46028284-46028303 MS.gene049797:intron 60.0%
CACCGATGGAGGTGGCAGCT+AGG + chr4.2:46026918-46026937 None:intergenic 65.0%
!! GGGTCTGGTGCTGCTCCTCT+TGG - chr4.2:46028279-46028298 MS.gene049797:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 46026628 46030114 46026628 ID=MS.gene049797
chr4.2 mRNA 46026628 46030114 46026628 ID=MS.gene049797.t1;Parent=MS.gene049797
chr4.2 exon 46029652 46030114 46029652 ID=MS.gene049797.t1.exon1;Parent=MS.gene049797.t1
chr4.2 CDS 46029652 46030114 46029652 ID=cds.MS.gene049797.t1;Parent=MS.gene049797.t1
chr4.2 exon 46028500 46028930 46028500 ID=MS.gene049797.t1.exon2;Parent=MS.gene049797.t1
chr4.2 CDS 46028500 46028930 46028500 ID=cds.MS.gene049797.t1;Parent=MS.gene049797.t1
chr4.2 exon 46027932 46028121 46027932 ID=MS.gene049797.t1.exon3;Parent=MS.gene049797.t1
chr4.2 CDS 46027932 46028121 46027932 ID=cds.MS.gene049797.t1;Parent=MS.gene049797.t1
chr4.2 exon 46027228 46027282 46027228 ID=MS.gene049797.t1.exon4;Parent=MS.gene049797.t1
chr4.2 CDS 46027228 46027282 46027228 ID=cds.MS.gene049797.t1;Parent=MS.gene049797.t1
chr4.2 exon 46026959 46027061 46026959 ID=MS.gene049797.t1.exon5;Parent=MS.gene049797.t1
chr4.2 CDS 46026959 46027061 46026959 ID=cds.MS.gene049797.t1;Parent=MS.gene049797.t1
chr4.2 exon 46026628 46026771 46026628 ID=MS.gene049797.t1.exon6;Parent=MS.gene049797.t1
chr4.2 CDS 46026628 46026771 46026628 ID=cds.MS.gene049797.t1;Parent=MS.gene049797.t1
Gene Sequence

>MS.gene049797

ATGCAGAAATCTGGTTATAGTCCAGATGGAATATACAGGTCCCTAAGACCTTCTCTAGACCTCCCAAACAATCCAAACCTCTCCTCAGTCTCATTCCTCTTCACAAGTGTCTCCTCTTCTCTCAACAAAACCGCCCTCATCGACGCAGACTCTTCCCAAACCCTCTCCTTCTCTCAACTCAAAACACAAGTTGCAAAACTTGCTCACAGTTTACTCAACCTTGGCATAAATAAAAACGACGTCGTCCTCATCCTCTCCCCCAACAACATCCAGTTTCCTGTCTGTTTCCTAGCTGCCACCTCCATCGGTGCAATAGTCACCACTGCAAATCCTCTTTACACCGTTGCGGAGCTCTCTAAACAAATATATTATTCCGATCCTAAACTAGTTATCACTGTCCCTGAATTATGGAGCAAAGTGAAGAGTTTCAGTTTCAACTTTCCTGCAATTATCATCAATTCGGGTAATATTAGATACAAAGTTAGTTAGATTGGTTAGTTATAGTTACTGGTTAGACTAGTTAGTTATTCTCATCATTCACTATACTGCTACCAGTTGGTTATAGTTATACTAATTAGCTGTTTTCTTCATTAGCTATATATTTGTTGCATCAGTTGTATTCTTTGAAGCACAGACAACTCTGACATTAAGTGTGTCTCGGTGTGCAACACGTGTAAGTGTCCAACACTTGTATGACACGTGTCAGACAAGTGTCCCAAAAAAAACTTTTTTTCCTTTGCTTCGACAAACTTTTACACCCCTTAGACACATCTCAGACACTTCTACGAGGTTTAAAGGCGTGTCGAAGTAGTTATGATCAATGAAGAGGTTGAAGACATTAATTTTGATAACGTCATTTTTAACTTTTCAATATAGTAGATGGATGAATCATGTGAAAATATGTCATATTTTGTTTATGAACTTCTTTGTAGTGTACCAAATTGCTCCGTTTAGATGTACATATCTATTTTAGTTCTCAACTTAGATATTTTATTGATAATGTTCGTATTTTATTTAATATATATACTATATGCTATATTGTCGACGTGTCCGAGTCAGAGTCCTTGCTTATAAGTTAGTTGTTCCCATCATTCGCTAGATAACTTGACTGTTCCCAGTTAGTTACAGTTGGACTAATTAGCTGTTCTCATCATTTGGTATATAAGAAACTTTTTATCTGATAGGTAACGTAACGGGTTCAAATTCAAACTTCGCCAGTTTTGAGGCGTTGATTGAATCAGCAGGAGAAGTAACAGAATTACCAGAAAACGATGTGAAACAAAGCGATACAGCGGCTTTGCTGTACTCATCAGGAACAACAGGAGAGAGCAAGGGCGTGATACTCACCCACAAGAACTTCATCGCAGCGGCGTTAATGATTAACATGGACGATGATTTAGCAGGGGAATTAAACAATGTGTTCATCTGCGTTTTACCGATGTTTCATGTGTTTGGATTGGCGGTTATAACATACGCGCAGCTAAGGAGAGGAAGTACGGTGGTTTCAATGGGGAGGTTTGAGTTAGAGGGTTTTTTGAAGGTGATTGAGAAGTATAGAGTGACGAATTTGTGGGTTGTGCCACCGATGATTCTTGCTTTGGCGAAACAGAGTGTGGTTGGGAAATATGATGTTTCTTCGTTGTAGAGTATTGGGTCTGGTGCTGCTCCTCTTGGGAAGGAATTAATGGAGGAGTGTGCTAGACAATGATCAGACAGTTAGGGAGCACACATTCACAAATTCCGACATCAGTAACCTTTCTATCAAGATCAGTCGGTCCGGATTAAAGATAGCTATTTAAAGTTATAAAACTGATTAAAATCTGTAATTTTTGGAATGTTGATCTTGATCAGACGGCTACCAATGATCTGAATGCATCAATGCATGCTTTCTTTATTAATTTATAAGTTGGTTGCATTGCATTGATCCTATTTGGGGCACCAGCTGGGTTAAAAATGATTTATGTATTATTAATTGATTATCTTGTGCTATTAGGGGTATGGTATGACAGAAACTTGTGCCGTTGTTTCTATCGAGAATCCAAGAGTAGGTATTCGTCATTCTGGCTCAGCTGGAATGTTGGTTTCAGGAGTCGAAGCTCAAATAGTGAGTGTGGATACAGAGAAGCCACTCCCTCCAAAACAATTGGGGGAAATATGCGTACAAGGTCCCAACATGATGCAAGGTAAATGTACATGTAGTGTTGTTGTTATGCTTGAAGGAATTTAGAAAGAAAGGGACTTGCATTCTTGGAAATGCTACATATACTTTATGATTTATACAAGTATATTCTTTATATTAAAAAATTCAAATTCTTGATATACATGTAACTTCTCTATACCAATGCAACTTCTTCTGTTGAGCTAATAATTAGAAACATGCACTTTAAGTTCCTTTTCATGCTTTCAAATAATTTTGTAATCAAATTTTATGACCACACTTACTTGTACAAGTCACTAGAGTACAATGGCCAACACTGTTTTAGTTGTATCTTTACTTTCAAATTATATCTTTGCTATATAATTGGAATTGCAAAGAGTTGACATGTTTTACTTAATGTAAAAGTTGGCATTTATTTTTATTACGTGAATATTTTCCATATGAAACTTCTCCTATTCAAATATTTCAGGTTATTGTAACAATCAAGAGGCTACAAAACAAACTTTAGATAGTGAGGGGTGCCCCAAATTATTATTCTTTATGTGTCAATCAATATTTGAGTGATTATTTGTTTATAACCCTTTTGTTGTATGTGTGAAAATGATTATTTTTGACAAGGAATTTCACATTATGTAATACTTGTCTCTTTGAAATTAACAAGGTTGCGCCAGCAGAACTTGAAGACCTTCTCGTTTCTCACTCTGAAATACAAGATGCTGTCGTTATCCCGTAAGTAAAACATTATCATCACTTGTAACAGTTGGTTTGACATATAGAAAAAAGTAATAAAAATGAAATTGTACACCATATAAATATACCGTGATGGACGACAAAACTGTTTTCCAATTGACATTTCTCTAACAATAATTCACATTTGAGTTACATATTTCTAAAGATTTCCTGATGATGAGGCTGGTGAGGTTCCAATTGCCTATGTTGTTCGTTCACCCAACAGTTCGCTGTCCGAGGAAGAAATTCAGAAGTTTATTGCTAACCAGGTGAGAAAAAGCCAAGTAACAAGTTTTATCTCCATGCACTTACAAGTTACAACAAAAGAAACACATTTGCAAGTTTTAAACTATGACACTTGAATGAAACTGTTTTTAATGGTGGTCAGTTTATCTCATTTGGATGATTGGTTTGTGTCATTCGTCAATTTAAACTCATTTTTATACACGTTTATAGGTTGCGCGCCCACTCAAAAGATTGCGAAGGGTTACATTCATCAACAGTGTTCCTAAGACAGCTTCAGGAAAAATTCTCAGAAGAGAGCTAATTGCAAAAGCACGATCCAAAATACAAGATAGAATGCAATTTCAAAGTGTATAG
Protein sequence

>MS.gene049797.t1

MQKSGYSPDGIYRSLRPSLDLPNNPNLSSVSFLFTSVSSSLNKTALIDADSSQTLSFSQLKTQVAKLAHSLLNLGINKNDVVLILSPNNIQFPVCFLAATSIGAIVTTANPLYTVAELSKQIYYSDPKLVITVPELWSKVKSFSFNFPAIIINSGNVTGSNSNFASFEALIESAGEVTELPENDVKQSDTAALLYSSGTTGESKGVILTHKNFIAAALMINMDDDLAGELNNVFICVLPMFHVFGLAVITYAQLRRGSTVVSMGRFELEGFLKVIEKYRVTNLWVVPPMILALAKQSVGYGMTETCAVVSIENPRVGIRHSGSAGMLVSGVEAQIVSVDTEKPLPPKQLGEICVQGPNMMQELEDLLVSHSEIQDAVVIPFPDDEAGEVPIAYVVRSPNSSLSEEEIQKFIANQVARPLKRLRRVTFINSVPKTASGKILRRELIAKARSKIQDRMQFQSV