AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016573

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016573.t1 MTR_8g039720 93.085 564 34 2 1 564 1 559 0.0 1076
MS.gene016573.t1 MTR_1g026310 78.920 574 97 6 1 564 1 560 0.0 899
MS.gene016573.t1 MTR_1g026470 74.880 418 81 6 1 408 1 404 0.0 607
MS.gene016573.t1 MTR_1g026430 74.940 415 80 6 1 405 1 401 0.0 603
MS.gene016573.t1 MTR_3g088870 44.077 574 272 12 6 560 11 554 1.67e-161 472
MS.gene016573.t1 MTR_4g057730 47.166 547 273 6 21 564 9 542 4.33e-160 468
MS.gene016573.t1 MTR_5g027480 44.779 565 291 7 4 564 8 555 3.13e-159 466
MS.gene016573.t1 MTR_3g088880 44.464 569 274 11 6 560 12 552 1.94e-158 464
MS.gene016573.t1 MTR_5g027500 45.326 567 290 8 8 564 12 568 9.93e-155 455
MS.gene016573.t1 MTR_4g077900 46.951 492 243 6 77 564 1 478 1.34e-152 446
MS.gene016573.t1 MTR_2g095510 43.863 554 289 8 15 564 4 539 1.17e-148 438
MS.gene016573.t1 MTR_1g090737 45.276 561 275 14 6 557 22 559 5.52e-146 433
MS.gene016573.t1 MTR_1g063120 44.144 555 284 13 24 564 13 555 5.04e-144 427
MS.gene016573.t1 MTR_1g063110 43.502 554 285 10 24 564 13 551 1.16e-143 426
MS.gene016573.t1 MTR_1g073180 42.342 555 284 9 11 557 1 527 8.52e-136 405
MS.gene016573.t1 MTR_4g057730 45.798 476 242 6 21 493 9 471 2.20e-127 382
MS.gene016573.t1 MTR_1g073180 41.155 537 280 9 11 539 23 531 1.09e-122 372
MS.gene016573.t1 MTR_2g105570 39.560 546 302 11 23 556 12 541 3.67e-121 368
MS.gene016573.t1 MTR_4g128337 38.858 543 304 8 23 556 17 540 1.88e-118 361
MS.gene016573.t1 MTR_4g057730 44.934 454 234 6 21 471 9 449 3.17e-116 352
MS.gene016573.t1 MTR_5g007640 39.489 509 285 7 55 556 87 579 9.27e-116 355
MS.gene016573.t1 MTR_3g460770 35.701 549 317 11 17 554 8 531 4.14e-111 342
MS.gene016573.t1 MTR_4g005750 38.645 546 301 11 23 556 11 534 4.21e-109 337
MS.gene016573.t1 MTR_2g095510 40.781 461 251 8 15 471 4 446 3.40e-103 319
MS.gene016573.t1 MTR_1g026350 82.353 153 24 2 1 150 1 153 8.04e-82 253
MS.gene016573.t1 MTR_1569s0010 28.210 514 339 11 65 556 22 527 1.75e-54 193
MS.gene016573.t1 MTR_3g035130 29.741 501 314 13 65 554 32 505 4.99e-53 189
MS.gene016573.t1 MTR_2g044180 27.839 546 351 17 46 564 29 558 4.87e-47 173
MS.gene016573.t1 MTR_5g008800 27.505 509 324 14 65 550 40 526 8.17e-47 172
MS.gene016573.t1 MTR_4g121600 26.993 552 356 16 46 564 29 566 4.18e-45 168
MS.gene016573.t1 MTR_8g074040 27.553 519 319 14 65 553 82 573 4.64e-45 168
MS.gene016573.t1 MTR_3g064420 28.008 532 324 17 62 556 37 546 1.28e-44 167
MS.gene016573.t1 MTR_2g044180 29.953 424 267 14 158 564 57 467 3.90e-43 160
MS.gene016573.t1 MTR_5g076240 26.642 533 326 14 65 560 40 544 6.37e-42 159
MS.gene016573.t1 MTR_4g013210 29.457 387 232 12 208 563 69 445 9.26e-42 156
MS.gene016573.t1 MTR_3g035130 29.231 455 284 13 65 508 32 459 1.52e-41 156
MS.gene016573.t1 MTR_5g008820 25.292 514 327 14 65 550 40 524 6.51e-41 155
MS.gene016573.t1 MTR_0803s0020 26.667 495 329 11 67 550 263 734 7.09e-41 159
MS.gene016573.t1 MTR_4g011790 27.692 390 247 10 200 563 218 598 5.60e-40 154
MS.gene016573.t1 MTR_8g074040 27.813 471 283 14 113 553 12 455 1.40e-39 151
MS.gene016573.t1 MTR_4g011790 27.204 397 249 10 200 563 218 607 3.98e-38 149
MS.gene016573.t1 MTR_4g011790 27.513 378 239 10 200 551 218 586 1.21e-37 147
MS.gene016573.t1 MTR_8g074120 27.155 464 295 12 113 553 41 484 2.23e-36 142
MS.gene016573.t1 MTR_4g013210 29.775 356 209 12 208 532 221 566 8.26e-36 141
MS.gene016573.t1 MTR_7g084850 24.862 543 366 15 52 564 194 724 1.13e-35 142
MS.gene016573.t1 MTR_5g076220 26.667 525 337 12 65 560 40 545 2.31e-35 140
MS.gene016573.t1 MTR_0161s0050 26.145 524 343 12 65 560 40 547 1.13e-34 138
MS.gene016573.t1 MTR_5g023730 26.095 525 318 17 65 553 43 533 5.91e-34 136
MS.gene016573.t1 MTR_5g076200 26.266 533 329 14 65 560 40 545 1.08e-33 135
MS.gene016573.t1 MTR_4g013210 27.733 375 213 12 208 563 69 404 7.32e-30 122
MS.gene016573.t1 MTR_4g013210 26.667 375 217 11 208 563 221 556 2.73e-29 122
MS.gene016573.t1 MTR_2g030240 24.169 451 308 8 66 496 29 465 3.25e-26 113
MS.gene016573.t1 MTR_2g030240 24.474 380 253 9 208 558 72 446 5.48e-25 108
MS.gene016573.t1 MTR_1054s0020 23.848 499 338 15 62 551 294 759 3.83e-24 107
MS.gene016573.t1 MTR_4g057755 63.014 73 27 0 420 492 46 118 4.03e-23 95.1
MS.gene016573.t1 MTR_3g088890 62.500 64 24 0 466 529 10 73 1.05e-21 90.1
MS.gene016573.t1 MTR_8g099420 24.760 416 243 15 207 557 222 632 4.67e-21 97.8
MS.gene016573.t1 MTR_1g030290 26.559 433 236 15 167 531 201 619 6.98e-21 97.1
MS.gene016573.t1 MTR_1g104810 23.974 463 269 15 59 477 141 564 1.12e-20 96.7
MS.gene016573.t1 MTR_1g104810 23.974 463 269 15 59 477 74 497 1.16e-20 96.3
MS.gene016573.t1 MTR_3g087980 25.722 381 210 11 174 486 206 581 5.21e-20 94.4
MS.gene016573.t1 MTR_4g066130 27.714 433 249 21 186 563 625 1048 2.59e-18 89.7
MS.gene016573.t1 MTR_7g109830 23.715 506 300 20 52 491 62 547 5.44e-18 88.2
MS.gene016573.t1 MTR_4g013210 26.148 283 161 9 208 481 221 464 1.30e-17 86.3
MS.gene016573.t1 MTR_1g086600 24.776 335 194 11 209 491 243 571 1.72e-17 86.7
MS.gene016573.t1 MTR_5g009360 25.708 424 229 18 207 557 95 505 3.19e-17 85.1
MS.gene016573.t1 MTR_5g009360 24.941 421 236 17 207 557 221 631 4.51e-17 85.1
MS.gene016573.t1 MTR_4g068670 24.124 485 296 17 59 486 72 541 8.08e-17 84.3
MS.gene016573.t1 MTR_4g013210 28.807 243 143 9 208 430 221 453 8.93e-17 83.6
MS.gene016573.t1 MTR_3g082660 25.075 335 179 11 210 480 283 609 2.82e-16 82.8
MS.gene016573.t1 MTR_8g083170 34.637 179 102 4 333 500 457 631 1.06e-15 80.9
MS.gene016573.t1 MTR_8g083170 25.352 284 178 9 46 306 88 360 1.95e-11 67.4
MS.gene016573.t1 MTR_2g098490 25.431 464 261 19 149 558 608 1040 2.08e-15 80.5
MS.gene016573.t1 MTR_5g009350 25.836 329 192 12 206 486 220 544 4.00e-15 79.0
MS.gene016573.t1 MTR_5g009350 25.915 328 191 12 207 486 221 544 4.27e-15 79.0
MS.gene016573.t1 MTR_5g009350 25.836 329 192 12 206 486 220 544 4.78e-15 78.6
MS.gene016573.t1 MTR_5g009350 25.836 329 192 12 206 486 220 544 5.19e-15 78.6
MS.gene016573.t1 MTR_3g084470 31.522 184 101 5 333 500 450 624 5.11e-14 75.5
MS.gene016573.t1 MTR_3g084450 33.540 161 82 5 333 477 454 605 1.03e-13 74.7
MS.gene016573.t1 MTR_3g084450 33.540 161 82 5 333 477 246 397 1.10e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016573.t1 AT1G20510 70.397 554 147 4 11 562 4 542 0.0 790
MS.gene016573.t1 AT1G20500 62.655 565 184 6 7 564 6 550 0.0 715
MS.gene016573.t1 AT1G20480 59.507 568 203 5 6 564 16 565 0.0 677
MS.gene016573.t1 AT1G20510 69.072 485 133 4 11 493 4 473 0.0 671
MS.gene016573.t1 AT5G38120 58.741 572 206 8 1 564 1 550 0.0 667
MS.gene016573.t1 AT1G20510 68.251 463 130 4 11 471 4 451 0.0 635
MS.gene016573.t1 AT5G38120 57.463 536 198 8 1 528 1 514 0.0 610
MS.gene016573.t1 AT5G38120 57.285 501 184 8 1 493 1 479 0.0 561
MS.gene016573.t1 AT5G38120 57.285 501 184 8 1 493 1 479 0.0 561
MS.gene016573.t1 AT1G20490 54.955 444 171 7 7 441 6 429 1.43e-167 483
MS.gene016573.t1 AT1G20490 54.955 444 171 7 7 441 6 429 1.43e-167 483
MS.gene016573.t1 AT5G63380 43.433 571 287 6 6 561 6 555 5.34e-166 484
MS.gene016573.t1 AT4G19010 42.096 563 306 8 7 564 15 562 1.60e-158 465
MS.gene016573.t1 AT4G05160 44.991 549 284 8 21 564 9 544 1.64e-156 459
MS.gene016573.t1 AT3G21240 39.338 544 311 7 18 556 17 546 1.87e-121 369
MS.gene016573.t1 AT1G65060 39.411 543 300 8 23 556 34 556 1.13e-115 355
MS.gene016573.t1 AT3G21230 37.862 552 314 10 19 556 24 560 1.90e-110 341
MS.gene016573.t1 AT1G51680 38.899 563 316 8 1 556 12 553 5.54e-110 340
MS.gene016573.t1 AT3G21230 36.654 532 302 11 19 535 24 535 9.78e-98 308
MS.gene016573.t1 AT1G62940 35.675 541 321 9 23 556 12 532 3.97e-97 306
MS.gene016573.t1 AT1G51680 37.196 535 308 8 1 528 12 525 6.79e-96 303
MS.gene016573.t1 AT3G21240 37.344 482 283 7 18 494 17 484 8.56e-96 301
MS.gene016573.t1 AT3G21240 37.344 482 283 7 18 494 17 484 8.56e-96 301
MS.gene016573.t1 AT3G21230 36.605 489 279 10 19 492 24 496 3.76e-88 281
MS.gene016573.t1 AT1G51680 37.074 499 286 8 1 492 12 489 9.10e-86 275
MS.gene016573.t1 AT1G65060 35.435 460 268 8 23 473 34 473 5.54e-76 249
MS.gene016573.t1 AT3G21230 31.818 418 256 10 19 422 24 426 2.31e-51 182
MS.gene016573.t1 AT1G20560 28.235 510 329 14 65 553 42 535 4.80e-48 176
MS.gene016573.t1 AT5G16340 29.038 520 325 15 65 558 41 542 9.15e-48 175
MS.gene016573.t1 AT1G21530 28.889 540 313 18 59 560 37 543 1.14e-47 175
MS.gene016573.t1 AT5G16370 29.222 527 328 15 65 564 41 549 1.19e-47 175
MS.gene016573.t1 AT3G48990 27.525 505 322 12 64 554 30 504 3.44e-47 172
MS.gene016573.t1 AT1G77240 28.702 547 324 18 54 562 25 543 6.07e-47 172
MS.gene016573.t1 AT1G21530 28.439 538 320 17 59 560 37 545 1.21e-46 172
MS.gene016573.t1 AT1G21540 29.323 532 312 17 66 562 46 548 1.65e-46 171
MS.gene016573.t1 AT1G65890 28.397 574 329 23 36 558 11 553 3.38e-44 166
MS.gene016573.t1 AT1G75960 28.023 521 330 16 65 560 41 541 3.50e-44 165
MS.gene016573.t1 AT1G66120 28.546 564 339 20 36 562 11 547 5.36e-44 165
MS.gene016573.t1 AT3G16910 26.590 519 342 13 65 556 48 554 1.78e-43 163
MS.gene016573.t1 AT1G65880 28.348 575 329 23 36 558 11 554 1.04e-42 161
MS.gene016573.t1 AT1G76290 27.413 518 333 16 64 560 39 534 1.14e-42 160
MS.gene016573.t1 AT1G20560 28.355 462 294 14 113 553 12 457 1.38e-41 156
MS.gene016573.t1 AT2G17650 26.391 557 366 17 34 560 55 597 5.83e-39 151
MS.gene016573.t1 AT5G36880 24.723 542 370 14 51 564 138 669 1.19e-34 139
MS.gene016573.t1 AT5G36880 24.723 542 370 14 51 564 138 669 1.19e-34 139
MS.gene016573.t1 AT5G36880 24.723 542 370 14 51 564 138 669 1.19e-34 139
MS.gene016573.t1 AT5G36880 24.723 542 370 14 51 564 138 669 1.19e-34 139
MS.gene016573.t1 AT5G36880 24.723 542 370 14 51 564 188 719 1.80e-34 139
MS.gene016573.t1 AT1G30520 27.234 470 293 11 66 507 34 482 7.86e-33 132
MS.gene016573.t1 AT1G30520 27.234 470 293 11 66 507 34 482 7.86e-33 132
MS.gene016573.t1 AT3G16170 26.316 380 240 11 208 558 234 602 1.02e-32 133
MS.gene016573.t1 AT1G68270 26.306 555 328 21 36 556 11 518 1.37e-32 132
MS.gene016573.t1 AT1G30520 26.164 451 281 12 66 488 34 460 8.42e-26 111
MS.gene016573.t1 AT1G30520 26.164 451 281 12 66 488 34 460 8.42e-26 111
MS.gene016573.t1 AT5G36880 23.983 467 320 13 51 492 138 594 3.96e-25 110
MS.gene016573.t1 AT1G64400 23.328 583 355 22 52 557 65 632 5.51e-21 97.4
MS.gene016573.t1 AT1G77590 27.485 342 176 10 209 486 100 433 1.18e-19 92.8
MS.gene016573.t1 AT1G77590 27.485 342 176 10 209 486 246 579 1.80e-19 92.8
MS.gene016573.t1 AT5G27600 27.445 317 173 10 208 477 261 567 2.93e-19 92.0
MS.gene016573.t1 AT1G49430 23.567 471 292 14 52 465 65 524 1.14e-17 87.0
MS.gene016573.t1 AT2G47240 25.904 332 192 11 209 491 221 547 5.86e-17 84.7
MS.gene016573.t1 AT2G47240 25.904 332 192 11 209 491 221 547 5.86e-17 84.7
MS.gene016573.t1 AT2G47240 25.904 332 192 11 209 491 221 547 5.86e-17 84.7
MS.gene016573.t1 AT2G47240 25.904 332 192 11 209 491 162 488 7.79e-17 84.3
MS.gene016573.t1 AT3G05970 26.667 315 178 9 208 477 261 567 1.39e-16 83.6
MS.gene016573.t1 AT4G11030 21.935 465 276 16 66 465 81 523 5.49e-15 78.6
MS.gene016573.t1 AT3G23790 26.587 252 171 6 65 306 111 358 2.51e-13 73.6
MS.gene016573.t1 AT3G23790 31.319 182 100 5 335 500 457 629 1.14e-11 68.2
MS.gene016573.t1 AT4G14070 23.899 318 220 7 3 306 65 374 7.70e-12 68.6
MS.gene016573.t1 AT4G14070 32.222 180 105 5 333 500 471 645 3.05e-11 66.6

Find 186 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGCCATTGAAAAGTTTA+AGG 0.135874 8.1:+64342922 MS.gene016573:CDS
GCTAACTCATCCTGCAATTT+TGG 0.152401 8.1:+64345220 MS.gene016573:CDS
AGGCGATGCTGCCTTGATTT+TGG 0.187811 8.1:-64342489 None:intergenic
AGCTCACCGGTCTGGTTAAC+TGG 0.218343 8.1:-64343259 None:intergenic
CTCCAACATGGGAATCAAAA+AGG 0.240880 8.1:+64342289 MS.gene016573:CDS
TGGTTCAAACTGTATCTTCT+AGG 0.243264 8.1:+64342753 MS.gene016573:CDS
GTAGAGTAGCTGTGTCTTCT+TGG 0.257071 8.1:-64342664 None:intergenic
TTCGCTGGGCTTCTCTCTTT+AGG 0.282480 8.1:+64342854 MS.gene016573:CDS
TACTGCCCAGCCTCCTTATC+TGG 0.284555 8.1:-64346067 None:intergenic
TCGGCTTCCATGAGAATAAT+TGG 0.285788 8.1:-64342518 None:intergenic
GTTGCCATTCTTCAAGGTTA+TGG 0.299320 8.1:+64343106 MS.gene016573:CDS
CACCGCATAACACCATATTT+AGG 0.306737 8.1:-64343030 None:intergenic
CTCTACTCATCTGGAACAAC+GGG 0.315176 8.1:+64342686 MS.gene016573:CDS
CCTTGAAGAATGGCAACATT+AGG 0.315840 8.1:-64343100 None:intergenic
GATAAAGGTGGTGGCATCTA+AGG 0.318164 8.1:-64342159 None:intergenic
GATTCTTATTTGTGGTTGAT+AGG 0.319356 8.1:+64344428 MS.gene016573:CDS
CATGTCATGCATTTCGAACT+TGG 0.321212 8.1:-64342897 None:intergenic
TGACTTGAGTTCCCTAAATA+TGG 0.329156 8.1:+64343018 MS.gene016573:CDS
CCTAATGTTGCCATTCTTCA+AGG 0.342791 8.1:+64343100 MS.gene016573:CDS
ACACACCACAGGGAAGTAAA+TGG 0.353482 8.1:-64342342 None:intergenic
GTTGAGCATAGCAACCAATA+TGG 0.354981 8.1:-64342969 None:intergenic
TTTGGTCCACATGTCATCAT+AGG 0.356686 8.1:-64342600 None:intergenic
AATTAAATACAAGGGGTATC+AGG 0.358754 8.1:+64344462 MS.gene016573:CDS
GAGCTACAAAACCCACTTGT+TGG 0.359716 8.1:-64342083 None:intergenic
CTCACAGAATCCTTTGGAGC+TGG 0.368763 8.1:+64343130 MS.gene016573:CDS
ATTCCCATGTTTCACATATA+CGG 0.370767 8.1:+64342821 MS.gene016573:CDS
TTTGTCCGGTCCAGAACTTT+TGG 0.377948 8.1:-64342618 None:intergenic
TGGTTGACTTGCTCTCTCAT+TGG 0.384100 8.1:-64342644 None:intergenic
ACCGCATAACACCATATTTA+GGG 0.385637 8.1:-64343029 None:intergenic
GTGGCATCTAAGGACTGATT+TGG 0.387656 8.1:-64342149 None:intergenic
ATGGGCGCGGGAGGAGATAA+AGG 0.388513 8.1:-64342174 None:intergenic
ATCATTGTTGACACTGAAAC+TGG 0.390741 8.1:+64343226 MS.gene016573:CDS
CTTGAAGAATGGCAACATTA+GGG 0.399688 8.1:-64343099 None:intergenic
GGGATTGGTGGTGGTGATGA+TGG 0.407542 8.1:-64342387 None:intergenic
ACCGCTTGTACCGCCCATAT+TGG 0.410225 8.1:+64342955 MS.gene016573:CDS
GCAGAGGGTTGGCTAAGAAC+TGG 0.411425 8.1:+64344379 MS.gene016573:CDS
AGATGGAGCACGATGGGAAT+AGG 0.422814 8.1:+64342045 None:intergenic
ATCCATCTGGTAAAATTCTT+CGG 0.423771 8.1:+64346368 MS.gene016573:CDS
TCACAGAATCCTTTGGAGCT+GGG 0.423849 8.1:+64343131 MS.gene016573:CDS
TATGGTCTCACAGAATCCTT+TGG 0.427916 8.1:+64343124 MS.gene016573:CDS
TATGGAATTTGTTGCAGCCC+AGG 0.428627 8.1:+64346144 MS.gene016573:CDS
TTAACCAGACCGGTGAGCTT+TGG 0.429385 8.1:+64343263 MS.gene016573:CDS
TGTAAAGGCGAGGACAGGTT+TGG 0.429436 8.1:-64342450 None:intergenic
GGTGAAGTGGTGGCCGGTGG+AGG 0.431493 8.1:-64342222 None:intergenic
AGTCGTAAGTACGGCACGGC+GGG 0.433502 8.1:+64343178 MS.gene016573:CDS
TGTGTTGAGGGGATTGGTGG+TGG 0.436188 8.1:-64342396 None:intergenic
TACTCTTCCAATTATTCTCA+TGG 0.441050 8.1:+64342511 MS.gene016573:CDS
AGACCGGTGAGCTTTGGCTC+AGG 0.441748 8.1:+64343269 MS.gene016573:CDS
GCTACTCTACTCTACTCATC+TGG 0.447509 8.1:+64342677 MS.gene016573:CDS
GACATGTGGACCAAAAGTTC+TGG 0.447652 8.1:+64342608 MS.gene016573:CDS
TACGGTCTAGCAATGTTCGC+TGG 0.453295 8.1:+64342839 MS.gene016573:CDS
ACAGGGAAGTAAATGGAGTT+AGG 0.454014 8.1:-64342335 None:intergenic
CTGCAACAAATTCCATAACT+TGG 0.455674 8.1:-64346138 None:intergenic
GACCGGTGAGCTTTGGCTCA+GGG 0.459780 8.1:+64343270 MS.gene016573:CDS
TAGTGATGGATTCTTATTTG+TGG 0.459992 8.1:+64344420 MS.gene016573:CDS
CTGATTTGGAGGAAGTAGGA+GGG 0.461722 8.1:-64342135 None:intergenic
TAAATATGGTGTTATGCGGT+GGG 0.468767 8.1:+64343032 MS.gene016573:CDS
CACAGAATCCTTTGGAGCTG+GGG 0.472648 8.1:+64343132 MS.gene016573:CDS
CTTTGCTATATTGATAGTGA+TGG 0.473126 8.1:+64344406 MS.gene016573:CDS
AGCTATCCAGATAAGGAGGC+TGG 0.473314 8.1:+64346061 MS.gene016573:intron
CGATTTCACGTACTGTGTTG+AGG 0.475649 8.1:-64342409 None:intergenic
GGCAGGTTATTTAAATAATG+AGG 0.477455 8.1:+64344333 MS.gene016573:intron
TTAGCCAACCCTCTGCAGTA+AGG 0.482826 8.1:-64344372 None:intergenic
ACAGCAGCATCCAAAATTGC+AGG 0.483805 8.1:-64345230 None:intergenic
CAGTGTGGCCGTGATGGGCG+CGG 0.484862 8.1:-64342187 None:intergenic
GATTTCACGTACTGTGTTGA+GGG 0.485874 8.1:-64342408 None:intergenic
CAGAGGGTTGGCTAAGAACT+GGG 0.486461 8.1:+64344380 MS.gene016573:CDS
TGAGCCAAAGCTCACCGGTC+TGG 0.490472 8.1:-64343267 None:intergenic
TTCCTTACCACATATGCCAT+TGG 0.491549 8.1:-64346091 None:intergenic
CAGTTTGAACCATTGCTATG+AGG 0.492937 8.1:-64342742 None:intergenic
ACCTCCTCTCTCTCCAACAT+GGG 0.494221 8.1:+64342278 MS.gene016573:CDS
CGGGTTGTAAAGGCGAGGAC+AGG 0.496292 8.1:-64342455 None:intergenic
ACTGATTTGGAGGAAGTAGG+AGG 0.500488 8.1:-64342136 None:intergenic
CATGTCAGAAAGCCAAGTTA+TGG 0.500528 8.1:+64346126 MS.gene016573:CDS
AGAGGAGGTGACAGCGTCGA+CGG 0.501433 8.1:-64342264 None:intergenic
CACCTCCTCTCTCTCCAACA+TGG 0.501542 8.1:+64342277 MS.gene016573:CDS
AAATGGAGTTAGGAGAGAAA+AGG 0.502885 8.1:-64342325 None:intergenic
GGCTGTCCAGAGTTGTTTGT+AGG 0.505785 8.1:-64342243 None:intergenic
AACAAAGCCTCTAGTTCAGC+TGG 0.506608 8.1:-64345197 None:intergenic
GCATATGTGGTAAGGAAGGA+TGG 0.507729 8.1:+64346097 MS.gene016573:CDS
ACGTACTGTGTTGAGGGGAT+TGG 0.509970 8.1:-64342402 None:intergenic
AACGAGGGGACGGGTTGTAA+AGG 0.510067 8.1:-64342465 None:intergenic
TTGAGCATAGCAACCAATAT+GGG 0.510556 8.1:-64342968 None:intergenic
TGTCTCAGTGTCATTTCCCT+CGG 0.514271 8.1:+64342362 MS.gene016573:CDS
TCCCCTCGTTTCCAAAATCA+AGG 0.516311 8.1:+64342478 MS.gene016573:CDS
TGAAAGCAGTGTGGCCGTGA+TGG 0.523098 8.1:-64342193 None:intergenic
TACTGTGTTGAGGGGATTGG+TGG 0.525298 8.1:-64342399 None:intergenic
TTTGTAGGTGAAGTGGTGGC+CGG 0.526148 8.1:-64342228 None:intergenic
TGGAGTTAGGAGAGAAAAGG+AGG 0.526620 8.1:-64342322 None:intergenic
TAGCCAACCCTCTGCAGTAA+GGG 0.530390 8.1:-64344371 None:intergenic
CTAAATATGGTGTTATGCGG+TGG 0.531565 8.1:+64343031 MS.gene016573:CDS
TATGTATAGCTATCCAGATA+AGG 0.531987 8.1:+64346054 MS.gene016573:intron
ATTCAATCTTCTACAGCAAG+AGG 0.535092 8.1:+64342108 MS.gene016573:CDS
ATCCAATGGCATATGTGGTA+AGG 0.535777 8.1:+64346089 MS.gene016573:CDS
AGTTGAAGCCCCAGCTCCAA+AGG 0.537059 8.1:-64343140 None:intergenic
ACCCCTGAGCCAAAGCTCAC+CGG 0.538756 8.1:-64343272 None:intergenic
GCATCTAAGGACTGATTTGG+AGG 0.539542 8.1:-64342146 None:intergenic
GAAAGCAGTGTGGCCGTGAT+GGG 0.541099 8.1:-64342192 None:intergenic
ACTTCACCTACAAACAACTC+TGG 0.542475 8.1:+64342237 MS.gene016573:CDS
AGTGTGGCCGTGATGGGCGC+GGG 0.545478 8.1:-64342186 None:intergenic
GGTGGTGATGATGGCGCCGA+GGG 0.548903 8.1:-64342378 None:intergenic
GCTCACCGGTCTGGTTAACT+GGG 0.548944 8.1:-64343258 None:intergenic
GATTCCCATGTTGGAGAGAG+AGG 0.548952 8.1:-64342282 None:intergenic
ACTCTACTCATCTGGAACAA+CGG 0.551121 8.1:+64342685 MS.gene016573:CDS
GAAAGAGCTAATTAAATACA+AGG 0.551275 8.1:+64344453 MS.gene016573:CDS
TGATTTGGAGGAAGTAGGAG+GGG 0.551329 8.1:-64342134 None:intergenic
AGCAGAATCAATCCAACAAG+TGG 0.551709 8.1:+64342071 MS.gene016573:CDS
GCAGTATCCAATGGCATATG+TGG 0.553901 8.1:+64346084 MS.gene016573:CDS
AGGACTGATTTGGAGGAAGT+AGG 0.554979 8.1:-64342139 None:intergenic
ACGGTCTAGCAATGTTCGCT+GGG 0.555238 8.1:+64342840 MS.gene016573:CDS
ATCTGGTAAAATTCTTCGGA+GGG 0.562325 8.1:+64346372 MS.gene016573:CDS
ATGAGAATAATTGGAAGAGT+AGG 0.563439 8.1:-64342509 None:intergenic
ATATTGAGATGGAGCACGAT+GGG 0.564263 8.1:+64342039 None:intergenic
TCTGTAACCTCTTTGCTGAG+AGG 0.564949 8.1:-64343058 None:intergenic
AAAAGACAAACCTTTCATGA+TGG 0.565361 8.1:-64343299 None:intergenic
TAATGACGAAGAATATGAGC+GGG 0.565586 8.1:+64342778 MS.gene016573:CDS
ACCGGTGAGCTTTGGCTCAG+GGG 0.566725 8.1:+64343271 MS.gene016573:CDS
ACCAATATGGGCGGTACAAG+CGG 0.569305 8.1:-64342956 None:intergenic
GTGGCCGTGATGGGCGCGGG+AGG 0.569540 8.1:-64342183 None:intergenic
CTCAGCAAAGAGGTTACAGA+AGG 0.569723 8.1:+64343061 MS.gene016573:CDS
AGAGTTGTTTGTAGGTGAAG+TGG 0.569801 8.1:-64342235 None:intergenic
ATCTCCTCCCGCGCCCATCA+CGG 0.570448 8.1:+64342179 MS.gene016573:CDS
GTGGACCAAAAGTTCTGGAC+CGG 0.574866 8.1:+64342613 MS.gene016573:CDS
GGAACAACGGGGCCTAGCAA+AGG 0.580215 8.1:+64342698 MS.gene016573:CDS
TTAGATGAGAGTCGTAAGTA+CGG 0.580230 8.1:+64343169 MS.gene016573:CDS
GAGACCATAACCTTGAAGAA+TGG 0.582202 8.1:-64343110 None:intergenic
GCGGGAGGAGATAAAGGTGG+TGG 0.587456 8.1:-64342168 None:intergenic
GAGGACATGATGAAGAAAGA+AGG 0.589504 8.1:+64342572 MS.gene016573:CDS
ATGACACTGAGACACACCAC+AGG 0.590967 8.1:-64342353 None:intergenic
ATTATTCTCATGGAAGCCGA+TGG 0.594085 8.1:+64342521 MS.gene016573:CDS
CATCTGGTAAAATTCTTCGG+AGG 0.595605 8.1:+64346371 MS.gene016573:CDS
AATGGCATATGTGGTAAGGA+AGG 0.598196 8.1:+64346093 MS.gene016573:CDS
GGTCCCTCCAGCTGAACTAG+AGG 0.600876 8.1:+64345190 MS.gene016573:intron
GCTTTCATCGACGCCTCCAC+CGG 0.601461 8.1:+64342209 MS.gene016573:CDS
TGATGATGTCGAGTTCCCAT+CGG 0.602679 8.1:-64342537 None:intergenic
AAAGAGCTAATTAAATACAA+GGG 0.603340 8.1:+64344454 MS.gene016573:CDS
GCTATCCAGATAAGGAGGCT+GGG 0.604731 8.1:+64346062 MS.gene016573:intron
TGGTGGTGATGATGGCGCCG+AGG 0.605849 8.1:-64342379 None:intergenic
AGGGGTCCTACCATCATGAA+AGG 0.608266 8.1:+64343289 MS.gene016573:CDS
AAATCAACCCTTACTGCAGA+GGG 0.608690 8.1:+64344364 MS.gene016573:CDS
ATTTCACGTACTGTGTTGAG+GGG 0.610197 8.1:-64342407 None:intergenic
GTCAATCCTATGATGACATG+TGG 0.610834 8.1:+64342594 MS.gene016573:CDS
TAGACCGTATATGTGAAACA+TGG 0.611992 8.1:-64342825 None:intergenic
GAAGATACTACTCCTTTGCT+AGG 0.612380 8.1:-64342710 None:intergenic
TTATTCTCATGGAAGCCGAT+GGG 0.618658 8.1:+64342522 MS.gene016573:CDS
GTAGGTGAAGTGGTGGCCGG+TGG 0.618668 8.1:-64342225 None:intergenic
GTCGTAAGTACGGCACGGCG+GGG 0.620732 8.1:+64343179 MS.gene016573:CDS
CAACCCTTACTGCAGAGGGT+TGG 0.621353 8.1:+64344368 MS.gene016573:CDS
TAACTCCATTTACTTCCCTG+TGG 0.626740 8.1:+64342337 MS.gene016573:CDS
ACATAGAAACCTCATAGCAA+TGG 0.627190 8.1:+64342733 MS.gene016573:CDS
CTGCTCCCAGTTAACCAGAC+CGG 0.629599 8.1:+64343253 MS.gene016573:CDS
GACATCATCATCAAACACAC+TGG 0.632350 8.1:+64342550 MS.gene016573:CDS
AAATATGGTGTTATGCGGTG+GGG 0.633272 8.1:+64343033 MS.gene016573:CDS
GGAGGCTGGGCAGTATCCAA+TGG 0.633360 8.1:+64346075 MS.gene016573:CDS
GCAGAATCAATCCAACAAGT+GGG 0.638311 8.1:+64342072 MS.gene016573:CDS
GTATAGCTATCCAGATAAGG+AGG 0.640405 8.1:+64346057 MS.gene016573:intron
AGACCGTATATGTGAAACAT+GGG 0.640574 8.1:-64342824 None:intergenic
AAGAGCTAATTAAATACAAG+GGG 0.641036 8.1:+64344455 MS.gene016573:CDS
AGGTTATTTAAATAATGAGG+AGG 0.643847 8.1:+64344336 MS.gene016573:intron
AAAGCCTCTAGTTCAGCTGG+AGG 0.643862 8.1:-64345194 None:intergenic
GATATTGAGATGGAGCACGA+TGG 0.644594 8.1:+64342038 None:intergenic
TAAATCAACCCTTACTGCAG+AGG 0.647491 8.1:+64344363 MS.gene016573:CDS
AACAATGATAGCCTCAGTGG+AGG 0.647619 8.1:-64343212 None:intergenic
TCCCTAAATATGGTGTTATG+CGG 0.653366 8.1:+64343028 MS.gene016573:CDS
AAGCCTCTAGTTCAGCTGGA+GGG 0.656701 8.1:-64345193 None:intergenic
GAACTTGGAGAGAACGACGA+TGG 0.658132 8.1:-64342882 None:intergenic
TGGGGCTCCTCTCAGCAAAG+AGG 0.665361 8.1:+64343051 MS.gene016573:CDS
ATCATCATCAAACACACTGG+AGG 0.669966 8.1:+64342553 MS.gene016573:CDS
GACAAACCTTTCATGATGGT+AGG 0.670435 8.1:-64343295 None:intergenic
TGAAATCGCAAAACAGATCG+CGG 0.670658 8.1:+64342424 MS.gene016573:CDS
GTCAACAATGATAGCCTCAG+TGG 0.671199 8.1:-64343215 None:intergenic
GTTGTTTGTAGGTGAAGTGG+TGG 0.672725 8.1:-64342232 None:intergenic
TCCCATGTTGGAGAGAGAGG+AGG 0.674861 8.1:-64342279 None:intergenic
ATATGGGCGGTACAAGCGGT+AGG 0.676986 8.1:-64342952 None:intergenic
AGCATAGCAACCAATATGGG+CGG 0.683092 8.1:-64342965 None:intergenic
TCAGCAAAGAGGTTACAGAA+GGG 0.687926 8.1:+64343062 MS.gene016573:CDS
GGGGACGGGTTGTAAAGGCG+AGG 0.691124 8.1:-64342460 None:intergenic
TTAATGACGAAGAATATGAG+CGG 0.698072 8.1:+64342777 MS.gene016573:CDS
GGCGCGGGAGGAGATAAAGG+TGG 0.699855 8.1:-64342171 None:intergenic
TGAGAGTCGTAAGTACGGCA+CGG 0.707187 8.1:+64343174 MS.gene016573:CDS
AGAGGGTTGGCTAAGAACTG+GGG 0.714900 8.1:+64344381 MS.gene016573:CDS
GAGTCGTAAGTACGGCACGG+CGG 0.718486 8.1:+64343177 MS.gene016573:CDS
TGACACTGAGACACACCACA+GGG 0.725682 8.1:-64342352 None:intergenic
AATGACGAAGAATATGAGCG+GGG 0.743826 8.1:+64342779 MS.gene016573:CDS
AGGCGTCGATGAAAGCAGTG+TGG 0.757006 8.1:-64342202 None:intergenic
TCTACTCATCTGGAACAACG+GGG 0.774289 8.1:+64342687 MS.gene016573:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTATATCAAATTATTAA+CGG + chr8.1:64343548-64343567 MS.gene016573:intron 10.0%
!!! CATTTTATAATTATTTTTCA+TGG + chr8.1:64345326-64345345 MS.gene016573:intron 10.0%
!!! TATTTTTGTATAAAAATATG+AGG + chr8.1:64345264-64345283 MS.gene016573:intron 10.0%
!!! TATTTTTTTTTTTTTTTGAG+AGG + chr8.1:64344546-64344565 MS.gene016573:intron 10.0%
!!! TTTTTATACAAAAATACTTA+CGG - chr8.1:64345260-64345279 None:intergenic 10.0%
!! AATAACTTTACGAATTTATA+AGG + chr8.1:64343839-64343858 MS.gene016573:intron 15.0%
!! ATAATCTTTGGTATAAATTA+AGG - chr8.1:64345404-64345423 None:intergenic 15.0%
!! TAATCTTTGGTATAAATTAA+GGG - chr8.1:64345403-64345422 None:intergenic 15.0%
!! TTTATATCATAAGATTTCAT+AGG + chr8.1:64343613-64343632 MS.gene016573:intron 15.0%
!!! ATCTTATTAAGCTTTATTAT+TGG - chr8.1:64344794-64344813 None:intergenic 15.0%
!!! ATTATTTATTTTATTCGAGT+AGG + chr8.1:64345932-64345951 MS.gene016573:intron 15.0%
!!! GATTTTTTTTTTAATGTTAC+AGG + chr8.1:64345169-64345188 MS.gene016573:intron 15.0%
!!! TACTAATTATTTTTTATGCA+TGG + chr8.1:64346281-64346300 MS.gene016573:intron 15.0%
!!! TCATTTTTTCACTATAATTT+AGG + chr8.1:64343332-64343351 MS.gene016573:intron 15.0%
!!! TTGAATCAAACAATTTTTTA+CGG - chr8.1:64343993-64344012 None:intergenic 15.0%
!! AAAGAGCTAATTAAATACAA+GGG + chr8.1:64344454-64344473 MS.gene016573:CDS 20.0%
!! AACAAAAGCAAAATATTGTA+AGG + chr8.1:64344682-64344701 MS.gene016573:intron 20.0%
!! ACAAAAGCAAAATATTGTAA+GGG + chr8.1:64344683-64344702 MS.gene016573:intron 20.0%
!! ATTTATTAAAGTAGCATTGT+TGG + chr8.1:64345302-64345321 MS.gene016573:intron 20.0%
!! GATGTGATTTATTGAATTAA+AGG + chr8.1:64343752-64343771 MS.gene016573:intron 20.0%
!! TACAAGTAACCTATTATAAT+TGG + chr8.1:64345874-64345893 MS.gene016573:intron 20.0%
!! TCAATTTAGCCAATTATAAT+AGG - chr8.1:64345886-64345905 None:intergenic 20.0%
!! TTATACCAAAGATTATATGT+TGG + chr8.1:64345408-64345427 MS.gene016573:intron 20.0%
!! TTTAATTAACGTCAAAGATA+TGG + chr8.1:64344306-64344325 MS.gene016573:intron 20.0%
!!! AATATTTTGCTTTTGTTTTC+CGG - chr8.1:64344679-64344698 None:intergenic 20.0%
!!! ATATTTCGTTTTTGTGTTTT+TGG - chr8.1:64344572-64344591 None:intergenic 20.0%
!!! ATGAGTTTAACTTGTTAAAT+TGG + chr8.1:64346248-64346267 MS.gene016573:intron 20.0%
!!! ATGTACAATTAAATTAGTCT+TGG - chr8.1:64343801-64343820 None:intergenic 20.0%
!!! CATTTGTTTCTTTTGAAAAA+TGG - chr8.1:64345966-64345985 None:intergenic 20.0%
!!! TTATTAAGCTTTATTATTGG+TGG - chr8.1:64344791-64344810 None:intergenic 20.0%
! AAATAGTGTTTGTGTTTGAT+AGG - chr8.1:64343456-64343475 None:intergenic 25.0%
! AAGAGAAATACTTTCTTGTA+TGG + chr8.1:64343895-64343914 MS.gene016573:intron 25.0%
! AAGAGCTAATTAAATACAAG+GGG + chr8.1:64344455-64344474 MS.gene016573:CDS 25.0%
! ACACTAAAGTCCTAAAAAAA+TGG + chr8.1:64343920-64343939 MS.gene016573:intron 25.0%
! ACTAAATGATTAAACTCAAG+TGG - chr8.1:64344068-64344087 None:intergenic 25.0%
! ACTATAAAGATAGATTCAAG+AGG - chr8.1:64344506-64344525 None:intergenic 25.0%
! AGGTTATTTAAATAATGAGG+AGG + chr8.1:64344336-64344355 MS.gene016573:intron 25.0%
! CACTAAAGTCCTAAAAAAAT+GGG + chr8.1:64343921-64343940 MS.gene016573:intron 25.0%
! CTAAATCATCTTCTTTGTAT+GGG - chr8.1:64344716-64344735 None:intergenic 25.0%
! CTTCTAAATACACCAAATAT+CGG + chr8.1:64344869-64344888 MS.gene016573:intron 25.0%
! GAAAATATGAAAGTTGTTTG+AGG + chr8.1:64345568-64345587 MS.gene016573:intron 25.0%
! GAAAGAGCTAATTAAATACA+AGG + chr8.1:64344453-64344472 MS.gene016573:CDS 25.0%
! GACCAAACTTCATATTATTA+TGG - chr8.1:64343948-64343967 None:intergenic 25.0%
! GACCATAATAATATGAAGTT+TGG + chr8.1:64343943-64343962 MS.gene016573:intron 25.0%
! GCTTAATAAGATCTAGTAAT+TGG + chr8.1:64344802-64344821 MS.gene016573:intron 25.0%
! GTAGAAAATAAAGTTGTGTA+TGG + chr8.1:64343774-64343793 MS.gene016573:intron 25.0%
! TACTACAATTGTGATTTCTT+TGG - chr8.1:64345042-64345061 None:intergenic 25.0%
! TAGTAAAAAAAACTTGTGCA+TGG - chr8.1:64343688-64343707 None:intergenic 25.0%
! TATTCTATCTATGCTAATCA+TGG + chr8.1:64344275-64344294 MS.gene016573:intron 25.0%
! TCTAAATCATCTTCTTTGTA+TGG - chr8.1:64344717-64344736 None:intergenic 25.0%
! TTGAAGTCGTAATAAAAGTT+AGG + chr8.1:64344747-64344766 MS.gene016573:intron 25.0%
! TTTATTACGACTTCAATTCA+TGG - chr8.1:64344743-64344762 None:intergenic 25.0%
!! ACTATAATTTAGGAGTGTAT+TGG + chr8.1:64343342-64343361 MS.gene016573:intron 25.0%
!! ACTTTTCGAATTCTTTTGTA+CGG - chr8.1:64346322-64346341 None:intergenic 25.0%
!! TTTTTATGCATGGATTTTAC+AGG + chr8.1:64346291-64346310 MS.gene016573:intron 25.0%
!!! AATTTTACCAGATGGATTTT+TGG - chr8.1:64346365-64346384 None:intergenic 25.0%
!!! ATCTAAAGCTTTATTCACTT+AGG - chr8.1:64344211-64344230 None:intergenic 25.0%
!!! ATTTTACCAGATGGATTTTT+GGG - chr8.1:64346364-64346383 None:intergenic 25.0%
!!! GCACAAGTTTTTTTTACTAT+TGG + chr8.1:64343689-64343708 MS.gene016573:intron 25.0%
!!! TATTATGGTCCCATTTTTTT+AGG - chr8.1:64343933-64343952 None:intergenic 25.0%
AAAAGACAAACCTTTCATGA+TGG - chr8.1:64343302-64343321 None:intergenic 30.0%
AGATTTCATAGGATGTGAAT+TGG + chr8.1:64343624-64343643 MS.gene016573:intron 30.0%
ATCCATCTGGTAAAATTCTT+CGG + chr8.1:64346368-64346387 MS.gene016573:CDS 30.0%
ATGAGAATAATTGGAAGAGT+AGG - chr8.1:64342512-64342531 None:intergenic 30.0%
ATTCCCATGTTTCACATATA+CGG + chr8.1:64342821-64342840 MS.gene016573:CDS 30.0%
GAATTGCACTATCAATATGT+GGG - chr8.1:64345488-64345507 None:intergenic 30.0%
GACTTAATTGTGAATCAAGA+TGG - chr8.1:64346016-64346035 None:intergenic 30.0%
GATTTCATAGGATGTGAATT+GGG + chr8.1:64343625-64343644 MS.gene016573:intron 30.0%
GGCAGGTTATTTAAATAATG+AGG + chr8.1:64344333-64344352 MS.gene016573:intron 30.0%
GTAATTTCACTCATTGCAAT+TGG + chr8.1:64345765-64345784 MS.gene016573:intron 30.0%
TAAACTATGAAGCACGAATA+CGG - chr8.1:64343597-64343616 None:intergenic 30.0%
TACTCTTCCAATTATTCTCA+TGG + chr8.1:64342511-64342530 MS.gene016573:CDS 30.0%
TATGTATAGCTATCCAGATA+AGG + chr8.1:64346054-64346073 MS.gene016573:intron 30.0%
TATTGTCTTAAAGTGTGATC+TGG - chr8.1:64344899-64344918 None:intergenic 30.0%
TCACATCACATTTGATTCAA+TGG - chr8.1:64343729-64343748 None:intergenic 30.0%
TGAATTGCACTATCAATATG+TGG - chr8.1:64345489-64345508 None:intergenic 30.0%
TGTTCCAAATTAACAAACCT+GGG - chr8.1:64346164-64346183 None:intergenic 30.0%
TTAATGACGAAGAATATGAG+CGG + chr8.1:64342777-64342796 MS.gene016573:CDS 30.0%
TTCAGCCATTGAAAAGTTTA+AGG + chr8.1:64342922-64342941 MS.gene016573:CDS 30.0%
TTGATAGACAAGAATAAACG+TGG + chr8.1:64343374-64343393 MS.gene016573:intron 30.0%
TTGATTCAAGAATCAAACTC+AGG + chr8.1:64344004-64344023 MS.gene016573:intron 30.0%
TTGCACCAACATATAATCTT+TGG - chr8.1:64345416-64345435 None:intergenic 30.0%
! GATTCTTATTTGTGGTTGAT+AGG + chr8.1:64344428-64344447 MS.gene016573:CDS 30.0%
! GTGATTTCTTTGGTAGTATT+TGG - chr8.1:64345032-64345051 None:intergenic 30.0%
!! AATTAAATACAAGGGGTATC+AGG + chr8.1:64344462-64344481 MS.gene016573:CDS 30.0%
!! ATTTTAATCCCATTTGCATC+TGG + chr8.1:64346222-64346241 MS.gene016573:intron 30.0%
!! CTTTGCTATATTGATAGTGA+TGG + chr8.1:64344406-64344425 MS.gene016573:CDS 30.0%
!! TAGTGATGGATTCTTATTTG+TGG + chr8.1:64344420-64344439 MS.gene016573:CDS 30.0%
!! TTAAGCTTTATTATTGGTGG+TGG - chr8.1:64344788-64344807 None:intergenic 30.0%
AAATGGAGTTAGGAGAGAAA+AGG - chr8.1:64342328-64342347 None:intergenic 35.0%
ACATAGAAACCTCATAGCAA+TGG + chr8.1:64342733-64342752 MS.gene016573:CDS 35.0%
ACCGCATAACACCATATTTA+GGG - chr8.1:64343032-64343051 None:intergenic 35.0%
ACCTATAAGTGCAGTGTATA+TGG - chr8.1:64345800-64345819 None:intergenic 35.0%
ACTCATAATCCAGATGCAAA+TGG - chr8.1:64346234-64346253 None:intergenic 35.0%
AGACCGTATATGTGAAACAT+GGG - chr8.1:64342827-64342846 None:intergenic 35.0%
ATCATTGTTGACACTGAAAC+TGG + chr8.1:64343226-64343245 MS.gene016573:CDS 35.0%
ATCTGGTAAAATTCTTCGGA+GGG + chr8.1:64346372-64346391 MS.gene016573:CDS 35.0%
ATTACGACTTCAATTCATGG+TGG - chr8.1:64344740-64344759 None:intergenic 35.0%
ATTCAATCTTCTACAGCAAG+AGG + chr8.1:64342108-64342127 MS.gene016573:CDS 35.0%
CTCATAATCCAGATGCAAAT+GGG - chr8.1:64346233-64346252 None:intergenic 35.0%
CTGCAACAAATTCCATAACT+TGG - chr8.1:64346141-64346160 None:intergenic 35.0%
CTTGAAGAATGGCAACATTA+GGG - chr8.1:64343102-64343121 None:intergenic 35.0%
GGTATACACCCAAAATACTA+GGG - chr8.1:64345995-64346014 None:intergenic 35.0%
GTGTTCCAAATTAACAAACC+TGG - chr8.1:64346165-64346184 None:intergenic 35.0%
GTTTGTGATTGCAAGTCTAT+TGG + chr8.1:64345084-64345103 MS.gene016573:intron 35.0%
TAACGTCAAAGATATGGTGA+TGG + chr8.1:64344312-64344331 MS.gene016573:intron 35.0%
TAATGACGAAGAATATGAGC+GGG + chr8.1:64342778-64342797 MS.gene016573:CDS 35.0%
TAGACCGTATATGTGAAACA+TGG - chr8.1:64342828-64342847 None:intergenic 35.0%
TCCAACATGGGAATCAAAAA+GGG + chr8.1:64342290-64342309 MS.gene016573:CDS 35.0%
TCCATATACACTGCACTTAT+AGG + chr8.1:64345796-64345815 MS.gene016573:intron 35.0%
TGACTTGAGTTCCCTAAATA+TGG + chr8.1:64343018-64343037 MS.gene016573:CDS 35.0%
TGGTATACACCCAAAATACT+AGG - chr8.1:64345996-64346015 None:intergenic 35.0%
TGGTTCAAACTGTATCTTCT+AGG + chr8.1:64342753-64342772 MS.gene016573:CDS 35.0%
TTAGATGAGAGTCGTAAGTA+CGG + chr8.1:64343169-64343188 MS.gene016573:CDS 35.0%
TTCAACGTGATCATATGTGT+CGG - chr8.1:64343523-64343542 None:intergenic 35.0%
TTGAGCATAGCAACCAATAT+GGG - chr8.1:64342971-64342990 None:intergenic 35.0%
! AGGTTTTCATGAGTTTAGGA+AGG - chr8.1:64344934-64344953 None:intergenic 35.0%
! ATGCTACATCCCTAGTATTT+TGG + chr8.1:64345983-64346002 MS.gene016573:intron 35.0%
! CGTGACCTTAAACTTTTCAA+TGG - chr8.1:64342930-64342949 None:intergenic 35.0%
! GTAGAGAGAGTATACATTAC+AGG + chr8.1:64344637-64344656 MS.gene016573:intron 35.0%
! TACTCTCTCTACTTCCTTTT+AGG - chr8.1:64344629-64344648 None:intergenic 35.0%
! TGCTACATCCCTAGTATTTT+GGG + chr8.1:64345984-64346003 MS.gene016573:intron 35.0%
! TTATGCATGGATTTTACAGG+TGG + chr8.1:64346294-64346313 MS.gene016573:intron 35.0%
!! AAAACTCTCTTTGAAGCACA+AGG + chr8.1:64344599-64344618 MS.gene016573:intron 35.0%
!! AAGGGGTATCAGGTTATAAT+CGG + chr8.1:64344472-64344491 MS.gene016573:intron 35.0%
!! TAAATATGGTGTTATGCGGT+GGG + chr8.1:64343032-64343051 MS.gene016573:CDS 35.0%
!! TCCCTAAATATGGTGTTATG+CGG + chr8.1:64343028-64343047 MS.gene016573:CDS 35.0%
AAATCAACCCTTACTGCAGA+GGG + chr8.1:64344364-64344383 MS.gene016573:CDS 40.0%
AATGACGAAGAATATGAGCG+GGG + chr8.1:64342779-64342798 MS.gene016573:CDS 40.0%
AATGGCATATGTGGTAAGGA+AGG + chr8.1:64346093-64346112 MS.gene016573:CDS 40.0%
ACAGGGAAGTAAATGGAGTT+AGG - chr8.1:64342338-64342357 None:intergenic 40.0%
ACTTCACCTACAAACAACTC+TGG + chr8.1:64342237-64342256 MS.gene016573:CDS 40.0%
AGAGTTGTTTGTAGGTGAAG+TGG - chr8.1:64342238-64342257 None:intergenic 40.0%
AGCAGAATCAATCCAACAAG+TGG + chr8.1:64342071-64342090 MS.gene016573:CDS 40.0%
ATCATCATCAAACACACTGG+AGG + chr8.1:64342553-64342572 MS.gene016573:CDS 40.0%
ATCCAATGGCATATGTGGTA+AGG + chr8.1:64346089-64346108 MS.gene016573:CDS 40.0%
ATTATTCTCATGGAAGCCGA+TGG + chr8.1:64342521-64342540 MS.gene016573:CDS 40.0%
ATTTCACGTACTGTGTTGAG+GGG - chr8.1:64342410-64342429 None:intergenic 40.0%
CACCGCATAACACCATATTT+AGG - chr8.1:64343033-64343052 None:intergenic 40.0%
CACTGTGTTCTTAGTTGGTT+GGG - chr8.1:64345009-64345028 None:intergenic 40.0%
CAGTTTGAACCATTGCTATG+AGG - chr8.1:64342745-64342764 None:intergenic 40.0%
CATCTGGTAAAATTCTTCGG+AGG + chr8.1:64346371-64346390 MS.gene016573:CDS 40.0%
CATGCTCTCCAATATCATGA+AGG + chr8.1:64344967-64344986 MS.gene016573:intron 40.0%
CATGTCAGAAAGCCAAGTTA+TGG + chr8.1:64346126-64346145 MS.gene016573:CDS 40.0%
CATGTCATGCATTTCGAACT+TGG - chr8.1:64342900-64342919 None:intergenic 40.0%
CCTAATGTTGCCATTCTTCA+AGG + chr8.1:64343100-64343119 MS.gene016573:CDS 40.0%
CCTTGAAGAATGGCAACATT+AGG - chr8.1:64343103-64343122 None:intergenic 40.0%
CTCCAACATGGGAATCAAAA+AGG + chr8.1:64342289-64342308 MS.gene016573:CDS 40.0%
CTTCATGATATTGGAGAGCA+TGG - chr8.1:64344969-64344988 None:intergenic 40.0%
GAAGATACTACTCCTTTGCT+AGG - chr8.1:64342713-64342732 None:intergenic 40.0%
GAATTACACCATCATCTCCA+TGG - chr8.1:64345451-64345470 None:intergenic 40.0%
GACAAACCTTTCATGATGGT+AGG - chr8.1:64343298-64343317 None:intergenic 40.0%
GACATCATCATCAAACACAC+TGG + chr8.1:64342550-64342569 MS.gene016573:CDS 40.0%
GAGACCATAACCTTGAAGAA+TGG - chr8.1:64343113-64343132 None:intergenic 40.0%
GAGGACATGATGAAGAAAGA+AGG + chr8.1:64342572-64342591 MS.gene016573:CDS 40.0%
GATTTCACGTACTGTGTTGA+GGG - chr8.1:64342411-64342430 None:intergenic 40.0%
GCAGAATCAATCCAACAAGT+GGG + chr8.1:64342072-64342091 MS.gene016573:CDS 40.0%
GTATAGCTATCCAGATAAGG+AGG + chr8.1:64346057-64346076 MS.gene016573:intron 40.0%
GTCAATCCTATGATGACATG+TGG + chr8.1:64342594-64342613 MS.gene016573:CDS 40.0%
GTTGAGCATAGCAACCAATA+TGG - chr8.1:64342972-64342991 None:intergenic 40.0%
GTTGCCATTCTTCAAGGTTA+TGG + chr8.1:64343106-64343125 MS.gene016573:CDS 40.0%
TAAATCAACCCTTACTGCAG+AGG + chr8.1:64344363-64344382 MS.gene016573:CDS 40.0%
TAACTCCATTTACTTCCCTG+TGG + chr8.1:64342337-64342356 MS.gene016573:CDS 40.0%
TAGTTGGTTGGGAATCTCAA+CGG - chr8.1:64344998-64345017 None:intergenic 40.0%
TATGGTCTCACAGAATCCTT+TGG + chr8.1:64343124-64343143 MS.gene016573:CDS 40.0%
TCAGCAAAGAGGTTACAGAA+GGG + chr8.1:64343062-64343081 MS.gene016573:CDS 40.0%
TCCATACCCAAAAATCCATC+TGG + chr8.1:64346355-64346374 MS.gene016573:CDS 40.0%
TCGGCTTCCATGAGAATAAT+TGG - chr8.1:64342521-64342540 None:intergenic 40.0%
TGAAATCGCAAAACAGATCG+CGG + chr8.1:64342424-64342443 MS.gene016573:CDS 40.0%
TGTGAATTGGGTCAGATCTA+TGG + chr8.1:64343637-64343656 MS.gene016573:intron 40.0%
TTATTCTCATGGAAGCCGAT+GGG + chr8.1:64342522-64342541 MS.gene016573:CDS 40.0%
TTCCTTACCACATATGCCAT+TGG - chr8.1:64346094-64346113 None:intergenic 40.0%
TTTGGCACTGTGTTCTTAGT+TGG - chr8.1:64345014-64345033 None:intergenic 40.0%
TTTGGTCCACATGTCATCAT+AGG - chr8.1:64342603-64342622 None:intergenic 40.0%
! ACTCTACTCATCTGGAACAA+CGG + chr8.1:64342685-64342704 MS.gene016573:CDS 40.0%
! CTCCGAAGAATTTTACCAGA+TGG - chr8.1:64346373-64346392 None:intergenic 40.0%
! GCTAACTCATCCTGCAATTT+TGG + chr8.1:64345220-64345239 MS.gene016573:CDS 40.0%
! GGAGAGCATGGTTTGTAATT+CGG - chr8.1:64344957-64344976 None:intergenic 40.0%
! TCGGAGGTTTTCATGAGTTT+AGG - chr8.1:64344938-64344957 None:intergenic 40.0%
!! AAATATGGTGTTATGCGGTG+GGG + chr8.1:64343033-64343052 MS.gene016573:CDS 40.0%
!! ACCCTTTTTGATTCCCATGT+TGG - chr8.1:64342294-64342313 None:intergenic 40.0%
!! CTAAATATGGTGTTATGCGG+TGG + chr8.1:64343031-64343050 MS.gene016573:CDS 40.0%
!! TGCCTTGATTTTGGAAACGA+GGG - chr8.1:64342483-64342502 None:intergenic 40.0%
!!! ACCAGATGGATTTTTGGGTA+TGG - chr8.1:64346359-64346378 None:intergenic 40.0%
!!! GATGGATTTTTGGGTATGGA+AGG - chr8.1:64346355-64346374 None:intergenic 40.0%
!!! TCTCTCATTGGTCTTTTGTC+CGG - chr8.1:64342635-64342654 None:intergenic 40.0%
AACAATGATAGCCTCAGTGG+AGG - chr8.1:64343215-64343234 None:intergenic 45.0%
ACACACCACAGGGAAGTAAA+TGG - chr8.1:64342345-64342364 None:intergenic 45.0%
ACAGCAGCATCCAAAATTGC+AGG - chr8.1:64345233-64345252 None:intergenic 45.0%
AGCATAGCAACCAATATGGG+CGG - chr8.1:64342968-64342987 None:intergenic 45.0%
AGGCAGACTAGAAACAATGC+CGG + chr8.1:64344657-64344676 MS.gene016573:intron 45.0%
ATGAAGCACGAATACGGACA+TGG - chr8.1:64343591-64343610 None:intergenic 45.0%
CGATTTCACGTACTGTGTTG+AGG - chr8.1:64342412-64342431 None:intergenic 45.0%
CGGTTCAGCCTTCATGATAT+TGG - chr8.1:64344978-64344997 None:intergenic 45.0%
CTCAGCAAAGAGGTTACAGA+AGG + chr8.1:64343061-64343080 MS.gene016573:CDS 45.0%
GACAAGTGAGAGACAAGTCT+TGG + chr8.1:64343661-64343680 MS.gene016573:intron 45.0%
GACATGTGGACCAAAAGTTC+TGG + chr8.1:64342608-64342627 MS.gene016573:CDS 45.0%
GAGCTACAAAACCCACTTGT+TGG - chr8.1:64342086-64342105 None:intergenic 45.0%
GCACTGTGTTCTTAGTTGGT+TGG - chr8.1:64345010-64345029 None:intergenic 45.0%
GCAGTATCCAATGGCATATG+TGG + chr8.1:64346084-64346103 MS.gene016573:CDS 45.0%
GCATATGTGGTAAGGAAGGA+TGG + chr8.1:64346097-64346116 MS.gene016573:CDS 45.0%
GCTACTCTACTCTACTCATC+TGG + chr8.1:64342677-64342696 MS.gene016573:CDS 45.0%
GTAGAGTAGCTGTGTCTTCT+TGG - chr8.1:64342667-64342686 None:intergenic 45.0%
GTCAACAATGATAGCCTCAG+TGG - chr8.1:64343218-64343237 None:intergenic 45.0%
GTCTTAAAGTGTGATCTGGC+TGG - chr8.1:64344895-64344914 None:intergenic 45.0%
GTGGCATCTAAGGACTGATT+TGG - chr8.1:64342152-64342171 None:intergenic 45.0%
GTTGTTTGTAGGTGAAGTGG+TGG - chr8.1:64342235-64342254 None:intergenic 45.0%
TCCCCTCGTTTCCAAAATCA+AGG + chr8.1:64342478-64342497 MS.gene016573:CDS 45.0%
TCTGTAACCTCTTTGCTGAG+AGG - chr8.1:64343061-64343080 None:intergenic 45.0%
TGGAGTTAGGAGAGAAAAGG+AGG - chr8.1:64342325-64342344 None:intergenic 45.0%
! AACAAAGCCTCTAGTTCAGC+TGG - chr8.1:64345200-64345219 None:intergenic 45.0%
! CTCTACTCATCTGGAACAAC+GGG + chr8.1:64342686-64342705 MS.gene016573:CDS 45.0%
! CTTTTGCACCATGGAGATGA+TGG + chr8.1:64345440-64345459 MS.gene016573:intron 45.0%
! GAGCATGGTTTGTAATTCGG+AGG - chr8.1:64344954-64344973 None:intergenic 45.0%
! GATAAAGGTGGTGGCATCTA+AGG - chr8.1:64342162-64342181 None:intergenic 45.0%
! GTGATCATATGTGTCGGTGT+TGG - chr8.1:64343517-64343536 None:intergenic 45.0%
! TCTACTCATCTGGAACAACG+GGG + chr8.1:64342687-64342706 MS.gene016573:CDS 45.0%
! TGATGATGTCGAGTTCCCAT+CGG - chr8.1:64342540-64342559 None:intergenic 45.0%
! TGATTTGGAGGAAGTAGGAG+GGG - chr8.1:64342137-64342156 None:intergenic 45.0%
! TTTGTCCGGTCCAGAACTTT+TGG - chr8.1:64342621-64342640 None:intergenic 45.0%
!! ACTGATTTGGAGGAAGTAGG+AGG - chr8.1:64342139-64342158 None:intergenic 45.0%
!! AGGACTGATTTGGAGGAAGT+AGG - chr8.1:64342142-64342161 None:intergenic 45.0%
!! CTGATTTGGAGGAAGTAGGA+GGG - chr8.1:64342138-64342157 None:intergenic 45.0%
!! CTGCCTTGATTTTGGAAACG+AGG - chr8.1:64342484-64342503 None:intergenic 45.0%
!! GAGAGATGAAAGCACTCTTG+TGG + chr8.1:64345707-64345726 MS.gene016573:intron 45.0%
!! GCAGCCCAGGTTTGTTAATT+TGG + chr8.1:64346157-64346176 MS.gene016573:intron 45.0%
!! GCATCTAAGGACTGATTTGG+AGG - chr8.1:64342149-64342168 None:intergenic 45.0%
!! GCCTTGATTTTGGAAACGAG+GGG - chr8.1:64342482-64342501 None:intergenic 45.0%
!! GTCAAAGATATGGTGATGGC+AGG + chr8.1:64344316-64344335 MS.gene016573:intron 45.0%
!! TATGGAATTTGTTGCAGCCC+AGG + chr8.1:64346144-64346163 MS.gene016573:CDS 45.0%
!! TCACAGAATCCTTTGGAGCT+GGG + chr8.1:64343131-64343150 MS.gene016573:CDS 45.0%
!! TGATTTTGGAAACGAGGGGA+CGG - chr8.1:64342478-64342497 None:intergenic 45.0%
!! TGCAACTCACTTTTGCACCA+TGG + chr8.1:64345431-64345450 MS.gene016573:intron 45.0%
!! TGGTTGACTTGCTCTCTCAT+TGG - chr8.1:64342647-64342666 None:intergenic 45.0%
!! TGTCTCAGTGTCATTTCCCT+CGG + chr8.1:64342362-64342381 MS.gene016573:CDS 45.0%
AAGCACAAGGCGTGCCTAAA+AGG + chr8.1:64344612-64344631 MS.gene016573:intron 50.0%
ACCAATATGGGCGGTACAAG+CGG - chr8.1:64342959-64342978 None:intergenic 50.0%
ACCTCCTCTCTCTCCAACAT+GGG + chr8.1:64342278-64342297 MS.gene016573:CDS 50.0%
ACGGTCTAGCAATGTTCGCT+GGG + chr8.1:64342840-64342859 MS.gene016573:CDS 50.0%
ACGTACTGTGTTGAGGGGAT+TGG - chr8.1:64342405-64342424 None:intergenic 50.0%
AGCTATCCAGATAAGGAGGC+TGG + chr8.1:64346061-64346080 MS.gene016573:intron 50.0%
AGGGGTCCTACCATCATGAA+AGG + chr8.1:64343289-64343308 MS.gene016573:CDS 50.0%
ATGACACTGAGACACACCAC+AGG - chr8.1:64342356-64342375 None:intergenic 50.0%
GAACTTGGAGAGAACGACGA+TGG - chr8.1:64342885-64342904 None:intergenic 50.0%
GATTCCCATGTTGGAGAGAG+AGG - chr8.1:64342285-64342304 None:intergenic 50.0%
GCTATCCAGATAAGGAGGCT+GGG + chr8.1:64346062-64346081 MS.gene016573:intron 50.0%
GGCTGTCCAGAGTTGTTTGT+AGG - chr8.1:64342246-64342265 None:intergenic 50.0%
TACGGACATGGACACTGACA+AGG - chr8.1:64343579-64343598 None:intergenic 50.0%
TACGGTCTAGCAATGTTCGC+TGG + chr8.1:64342839-64342858 MS.gene016573:CDS 50.0%
TACTGTGTTGAGGGGATTGG+TGG - chr8.1:64342402-64342421 None:intergenic 50.0%
TAGCCAACCCTCTGCAGTAA+GGG - chr8.1:64344374-64344393 None:intergenic 50.0%
TGACACTGAGACACACCACA+GGG - chr8.1:64342355-64342374 None:intergenic 50.0%
TGAGAGTCGTAAGTACGGCA+CGG + chr8.1:64343174-64343193 MS.gene016573:CDS 50.0%
TGTAAAGGCGAGGACAGGTT+TGG - chr8.1:64342453-64342472 None:intergenic 50.0%
TTAACCAGACCGGTGAGCTT+TGG + chr8.1:64343263-64343282 MS.gene016573:CDS 50.0%
TTAGCCAACCCTCTGCAGTA+AGG - chr8.1:64344375-64344394 None:intergenic 50.0%
TTCGCTGGGCTTCTCTCTTT+AGG + chr8.1:64342854-64342873 MS.gene016573:CDS 50.0%
TTTGTAGGTGAAGTGGTGGC+CGG - chr8.1:64342231-64342250 None:intergenic 50.0%
! AAAGCCTCTAGTTCAGCTGG+AGG - chr8.1:64345197-64345216 None:intergenic 50.0%
! AAGCCTCTAGTTCAGCTGGA+GGG - chr8.1:64345196-64345215 None:intergenic 50.0%
! AGGCGATGCTGCCTTGATTT+TGG - chr8.1:64342492-64342511 None:intergenic 50.0%
! GCTTTTGTCTTCCTCCACTG+AGG + chr8.1:64343201-64343220 MS.gene016573:CDS 50.0%
! TGATCTGGCTGGCCGATATT+TGG - chr8.1:64344884-64344903 None:intergenic 50.0%
!! AGAGGGTTGGCTAAGAACTG+GGG + chr8.1:64344381-64344400 MS.gene016573:CDS 50.0%
!! CACAGAATCCTTTGGAGCTG+GGG + chr8.1:64343132-64343151 MS.gene016573:CDS 50.0%
!! CAGAGGGTTGGCTAAGAACT+GGG + chr8.1:64344380-64344399 MS.gene016573:CDS 50.0%
!! CTCACAGAATCCTTTGGAGC+TGG + chr8.1:64343130-64343149 MS.gene016573:CDS 50.0%
!! GATTTTGGAAACGAGGGGAC+GGG - chr8.1:64342477-64342496 None:intergenic 50.0%
!! GTGGACCAAAAGTTCTGGAC+CGG + chr8.1:64342613-64342632 MS.gene016573:CDS 50.0%
ACCGCTTGTACCGCCCATAT+TGG + chr8.1:64342955-64342974 MS.gene016573:CDS 55.0%
AGCTCACCGGTCTGGTTAAC+TGG - chr8.1:64343262-64343281 None:intergenic 55.0%
AGTTGAAGCCCCAGCTCCAA+AGG - chr8.1:64343143-64343162 None:intergenic 55.0%
ATATGGGCGGTACAAGCGGT+AGG - chr8.1:64342955-64342974 None:intergenic 55.0%
CAACCCTTACTGCAGAGGGT+TGG + chr8.1:64344368-64344387 MS.gene016573:CDS 55.0%
CACCTCCTCTCTCTCCAACA+TGG + chr8.1:64342277-64342296 MS.gene016573:CDS 55.0%
CTGCTCCCAGTTAACCAGAC+CGG + chr8.1:64343253-64343272 MS.gene016573:CDS 55.0%
GAAAGCAGTGTGGCCGTGAT+GGG - chr8.1:64342195-64342214 None:intergenic 55.0%
GCTCACCGGTCTGGTTAACT+GGG - chr8.1:64343261-64343280 None:intergenic 55.0%
TACTGCCCAGCCTCCTTATC+TGG - chr8.1:64346070-64346089 None:intergenic 55.0%
TCCCATGTTGGAGAGAGAGG+AGG - chr8.1:64342282-64342301 None:intergenic 55.0%
TGAAAGCAGTGTGGCCGTGA+TGG - chr8.1:64342196-64342215 None:intergenic 55.0%
! TGTGTTGAGGGGATTGGTGG+TGG - chr8.1:64342399-64342418 None:intergenic 55.0%
!! AACGAGGGGACGGGTTGTAA+AGG - chr8.1:64342468-64342487 None:intergenic 55.0%
!! AGGCGTCGATGAAAGCAGTG+TGG - chr8.1:64342205-64342224 None:intergenic 55.0%
!! GCAGAGGGTTGGCTAAGAAC+TGG + chr8.1:64344379-64344398 MS.gene016573:CDS 55.0%
!! GGGATTGGTGGTGGTGATGA+TGG - chr8.1:64342390-64342409 None:intergenic 55.0%
ACCCCTGAGCCAAAGCTCAC+CGG - chr8.1:64343275-64343294 None:intergenic 60.0%
AGTCGTAAGTACGGCACGGC+GGG + chr8.1:64343178-64343197 MS.gene016573:CDS 60.0%
ATGGGCGCGGGAGGAGATAA+AGG - chr8.1:64342177-64342196 None:intergenic 60.0%
CGGGTTGTAAAGGCGAGGAC+AGG - chr8.1:64342458-64342477 None:intergenic 60.0%
GAGTCGTAAGTACGGCACGG+CGG + chr8.1:64343177-64343196 MS.gene016573:CDS 60.0%
GCGGGAGGAGATAAAGGTGG+TGG - chr8.1:64342171-64342190 None:intergenic 60.0%
GCTTTCATCGACGCCTCCAC+CGG + chr8.1:64342209-64342228 MS.gene016573:CDS 60.0%
GGAACAACGGGGCCTAGCAA+AGG + chr8.1:64342698-64342717 MS.gene016573:CDS 60.0%
GGAGGCTGGGCAGTATCCAA+TGG + chr8.1:64346075-64346094 MS.gene016573:CDS 60.0%
GGTCCCTCCAGCTGAACTAG+AGG + chr8.1:64345190-64345209 MS.gene016573:intron 60.0%
TGAGCCAAAGCTCACCGGTC+TGG - chr8.1:64343270-64343289 None:intergenic 60.0%
TGGGGCTCCTCTCAGCAAAG+AGG + chr8.1:64343051-64343070 MS.gene016573:CDS 60.0%
! ACCGGTGAGCTTTGGCTCAG+GGG + chr8.1:64343271-64343290 MS.gene016573:CDS 60.0%
! AGACCGGTGAGCTTTGGCTC+AGG + chr8.1:64343269-64343288 MS.gene016573:CDS 60.0%
! AGAGGAGGTGACAGCGTCGA+CGG - chr8.1:64342267-64342286 None:intergenic 60.0%
! GACCGGTGAGCTTTGGCTCA+GGG + chr8.1:64343270-64343289 MS.gene016573:CDS 60.0%
ATCTCCTCCCGCGCCCATCA+CGG + chr8.1:64342179-64342198 MS.gene016573:CDS 65.0%
GGCGCGGGAGGAGATAAAGG+TGG - chr8.1:64342174-64342193 None:intergenic 65.0%
GTAGGTGAAGTGGTGGCCGG+TGG - chr8.1:64342228-64342247 None:intergenic 65.0%
GTCGTAAGTACGGCACGGCG+GGG + chr8.1:64343179-64343198 MS.gene016573:CDS 65.0%
!! GGGGACGGGTTGTAAAGGCG+AGG - chr8.1:64342463-64342482 None:intergenic 65.0%
!! GGTGGTGATGATGGCGCCGA+GGG - chr8.1:64342381-64342400 None:intergenic 65.0%
!! TGGTGGTGATGATGGCGCCG+AGG - chr8.1:64342382-64342401 None:intergenic 65.0%
GGTGAAGTGGTGGCCGGTGG+AGG - chr8.1:64342225-64342244 None:intergenic 70.0%
!! AGTGTGGCCGTGATGGGCGC+GGG - chr8.1:64342189-64342208 None:intergenic 70.0%
!! CAGTGTGGCCGTGATGGGCG+CGG - chr8.1:64342190-64342209 None:intergenic 70.0%
!!! GTGGCCGTGATGGGCGCGGG+AGG - chr8.1:64342186-64342205 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 64342047 64346426 64342047 ID=MS.gene016573
chr8.1 mRNA 64342047 64346426 64342047 ID=MS.gene016573.t1;Parent=MS.gene016573
chr8.1 exon 64342047 64343310 64342047 ID=MS.gene016573.t1.exon1;Parent=MS.gene016573.t1
chr8.1 CDS 64342047 64343310 64342047 ID=cds.MS.gene016573.t1;Parent=MS.gene016573.t1
chr8.1 exon 64344338 64344483 64344338 ID=MS.gene016573.t1.exon2;Parent=MS.gene016573.t1
chr8.1 CDS 64344338 64344483 64344338 ID=cds.MS.gene016573.t1;Parent=MS.gene016573.t1
chr8.1 exon 64345191 64345258 64345191 ID=MS.gene016573.t1.exon3;Parent=MS.gene016573.t1
chr8.1 CDS 64345191 64345258 64345191 ID=cds.MS.gene016573.t1;Parent=MS.gene016573.t1
chr8.1 exon 64346063 64346165 64346063 ID=MS.gene016573.t1.exon4;Parent=MS.gene016573.t1
chr8.1 CDS 64346063 64346165 64346063 ID=cds.MS.gene016573.t1;Parent=MS.gene016573.t1
chr8.1 exon 64346313 64346426 64346313 ID=MS.gene016573.t1.exon5;Parent=MS.gene016573.t1
chr8.1 CDS 64346313 64346426 64346313 ID=cds.MS.gene016573.t1;Parent=MS.gene016573.t1
Gene Sequence

>MS.gene016573

ATGGAGCACGATGGGAATAGGAATAGCAGAATCAATCCAACAAGTGGGTTTTGTAGCTCTAATTCAATCTTCTACAGCAAGAGGAAACCCCTCCTACTTCCTCCAAATCAGTCCTTAGATGCCACCACCTTTATCTCCTCCCGCGCCCATCACGGCCACACTGCTTTCATCGACGCCTCCACCGGCCACCACTTCACCTACAAACAACTCTGGACAGCCGTCGACGCTGTCACCTCCTCTCTCTCCAACATGGGAATCAAAAAGGGTGATGTTATCCTCCTTTTCTCTCCTAACTCCATTTACTTCCCTGTGGTGTGTCTCAGTGTCATTTCCCTCGGCGCCATCATCACCACCACCAATCCCCTCAACACAGTACGTGAAATCGCAAAACAGATCGCGGATTCCAAACCTGTCCTCGCCTTTACAACCCGTCCCCTCGTTTCCAAAATCAAGGCAGCATCGCCTACTCTTCCAATTATTCTCATGGAAGCCGATGGGAACTCGACATCATCATCAAACACACTGGAGGACATGATGAAGAAAGAAGGTCAATCCTATGATGACATGTGGACCAAAAGTTCTGGACCGGACAAAAGACCAATGAGAGAGCAAGTCAACCAAGAAGACACAGCTACTCTACTCTACTCATCTGGAACAACGGGGCCTAGCAAAGGAGTAGTATCTTCACATAGAAACCTCATAGCAATGGTTCAAACTGTATCTTCTAGGTTTAATGACGAAGAATATGAGCGGGGACAAACATTCATATGCACAATTCCCATGTTTCACATATACGGTCTAGCAATGTTCGCTGGGCTTCTCTCTTTAGGTTCAACCATCGTCGTTCTCTCCAAGTTCGAAATGCATGACATGCTTTCAGCCATTGAAAAGTTTAAGGTCACGTTCCTACCGCTTGTACCGCCCATATTGGTTGCTATGCTCAACAATGCTGATGCGATTAAGAGCAAATATGACTTGAGTTCCCTAAATATGGTGTTATGCGGTGGGGCTCCTCTCAGCAAAGAGGTTACAGAAGGGTTTGTTGATAAGTACCCTAATGTTGCCATTCTTCAAGGTTATGGTCTCACAGAATCCTTTGGAGCTGGGGCTTCAACTGATTCTTTAGATGAGAGTCGTAAGTACGGCACGGCGGGGCTTTTGTCTTCCTCCACTGAGGCTATCATTGTTGACACTGAAACTGGTAAACTGCTCCCAGTTAACCAGACCGGTGAGCTTTGGCTCAGGGGTCCTACCATCATGAAAGGTTTGTCTTTTTTTGTTTGTTTCATTTTTTCACTATAATTTAGGAGTGTATTGGATTCAAACTTTGATAGACAAGAATAAACGTGGTTTCAAAAGACTTTGATGATCAATATTTTGTAATGTAGATTTCAATTCATTTATATCCTATCAAACACAAACACTATTTGAATTAAGCGTGTTCACGTGTCAGACACGCTTCAATAGCCAACACCGACACATATGATCACGTTGAATTATGTGATTATATCAAATTATTAACGGTGTCGCCTTGTCAGTGTCCATGTCCGTATTCGTGCTTCATAGTTTATATCATAAGATTTCATAGGATGTGAATTGGGTCAGATCTATGGTGACAAGTGAGAGACAAGTCTTGGACCATGCACAAGTTTTTTTTACTATTGGATCAATAAATCTTACCATTGAATCAAATGTGATGTGATGTGATGTGATTTATTGAATTAAAGGTAGAAAATAAAGTTGTGTATGGTCCAAGACTAATTTAATTGTACATATTAGACAAAGTCTTTGAAATAACTTTACGAATTTATAAGGTTTCAAGTTATTCAATAATTTATACAAATTTTGAAGAGAAATACTTTCTTGTATGGTAACACTAAAGTCCTAAAAAAATGGGACCATAATAATATGAAGTTTGGTCTAGAGTTAAGCTAAGTAAAGTTCCGTAAAAAATTGTTTGATTCAAGAATCAAACTCAGGTTCTCTCGAATGTTTAATCATTAAGTGAAACTTATTAACCACTTGAGTTTAATCATTTAGTTTTTGAAGAGAAATACTAGCAAAACATTGTATAACACTCTTAGTAGTCTCAATACTCTATCTTGTTAAAGAAAATAAAGTAAAAATGTGTTTAAAAGTAACAATTTGAAAAGAAAAAACTCCTAAGTGAATAAAGCTTTAGATAGTTGCTCATATTAGTTAGATATAAGCAAGCTCACTTAATTGTTTATTCTATCTATGCTAATCATGGTTGTTGTTTTTAATTAACGTCAAAGATATGGTGATGGCAGGTTATTTAAATAATGAGGAGGCAACTAAATCAACCCTTACTGCAGAGGGTTGGCTAAGAACTGGGGATCTTTGCTATATTGATAGTGATGGATTCTTATTTGTGGTTGATAGGTTGAAAGAGCTAATTAAATACAAGGGGTATCAGGTTATAATCGGATTCTCATCCTCTTGAATCTATCTTTATAGTTTTTCTATAAACAAGTTTAGTATTTTTTTTTTTTTTTGAGAGGCCAAAAACACAAAAACGAAATATAGATTAAAAAACTCTCTTTGAAGCACAAGGCGTGCCTAAAAGGAAGTAGAGAGAGTATACATTACAGGCAGACTAGAAACAATGCCGGAAAACAAAAGCAAAATATTGTAAGGGAGTATAACCCATACAAAGAAGATGATTTAGACCACCATGAATTGAAGTCGTAATAAAAGTTAGGAAATTAGAACTTCAACCACCACCAATAATAAAGCTTAATAAGATCTAGTAATTGGTCTAACGATAATTCTTTGTTGCTAAAGATACGAACATTACGCTACTTCTAAATACACCAAATATCGGCCAGCCAGATCACACTTTAAGACAATACTTAATTGATATCCTTCCTAAACTCATGAAAACCTCCGAATTACAAACCATGCTCTCCAATATCATGAAGGCTGAACCGTTGAGATTCCCAACCAACTAAGAACACAGTGCCAAATACTACCAAAGAAATCACAATTGTAGTAATTATTTACAAACTTAACAACTGTTTGTGATTGCAAGTCTATTGGTAGCTACTTGTTGCTTATTCAATTAAGAATATAAATATTGTTAATCTCATGAAATTTTTCTTGATTTTTTTTTTAATGTTACAGGTCCCTCCAGCTGAACTAGAGGCTTTGTTGCTAACTCATCCTGCAATTTTGGATGCTGCTGTCATACCGTAAGTATTTTTGTATAAAAATATGAGGAAAAATAAAATTATTATTTATTAAAGTAGCATTGTTGGTCATTTTATAATTATTTTTCATGGAATTTGAACTCGCTATAAAGTTATACTTAGAAATAAACTTTACAGTGTAAGCCCTTAATTTATACCAAAGATTATATGTTGGTGCAACTCACTTTTGCACCATGGAGATGATGGTGTAATTCATTTTACACGTTCTCCCACATATTGATAGTGCAATTCACTCTTGCACTTACACACATTCACTGTTTGTTACTAGAGTATCAATGAAGAAGAATAATAGAAAATATGAAAGTTGTTTGAGGAAGTTTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAAGCACTCTTGTGGAATAGAATTGATCACTTTACTTGTGATTCTCACTTGTAATTTCACTCATTGCAATTGGTTATGTTTTCCATATACACTGCACTTATAGGTCACAAAGTGCATAGCTGTGTCAACATTCTGCACTCTGACTCTTATTACTTTCACTACAAGTAACCTATTATAATTGGCTAAATTGAATTACAACTCACAACATTATACATGAATTATTTATTTTATTCGAGTAGGTATTCTCTCCATTTTTCAAAAGAAACAAATGCTACATCCCTAGTATTTTGGGTGTATACCATCTTGATTCACAATTAAGTCCTTTGAATGTCTTGTTTCTATGTATAGCTATCCAGATAAGGAGGCTGGGCAGTATCCAATGGCATATGTGGTAAGGAAGGATGGAAGTAACATGTCAGAAAGCCAAGTTATGGAATTTGTTGCAGCCCAGGTTTGTTAATTTGGAACACTTCTCAACAATGCTAATCTTAATAAAGTTATAAAATAATTTTAATCCCATTTGCATCTGGATTATGAGTTTAACTTGTTAAATTGGTAAATTATATTACTAATTATTTTTTATGCATGGATTTTACAGGTGGCTCCGTACAAAAGAATTCGAAAAGTTGCATTCATACCTTCCATACCCAAAAATCCATCTGGTAAAATTCTTCGGAGGGATCTCATCAAGCTCGCTACTTCTAAACTCTGA
Protein sequence

>MS.gene016573.t1

MEHDGNRNSRINPTSGFCSSNSIFYSKRKPLLLPPNQSLDATTFISSRAHHGHTAFIDASTGHHFTYKQLWTAVDAVTSSLSNMGIKKGDVILLFSPNSIYFPVVCLSVISLGAIITTTNPLNTVREIAKQIADSKPVLAFTTRPLVSKIKAASPTLPIILMEADGNSTSSSNTLEDMMKKEGQSYDDMWTKSSGPDKRPMREQVNQEDTATLLYSSGTTGPSKGVVSSHRNLIAMVQTVSSRFNDEEYERGQTFICTIPMFHIYGLAMFAGLLSLGSTIVVLSKFEMHDMLSAIEKFKVTFLPLVPPILVAMLNNADAIKSKYDLSSLNMVLCGGAPLSKEVTEGFVDKYPNVAILQGYGLTESFGAGASTDSLDESRKYGTAGLLSSSTEAIIVDTETGKLLPVNQTGELWLRGPTIMKGYLNNEEATKSTLTAEGWLRTGDLCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQYPMAYVVRKDGSNMSESQVMEFVAAQVAPYKRIRKVAFIPSIPKNPSGKILRRDLIKLATSKL