AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61077

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61077.t1 MTR_8g039720 92.908 564 35 2 1 564 1 559 0.0 1073
MS.gene61077.t1 MTR_1g026310 78.746 574 98 6 1 564 1 560 0.0 897
MS.gene61077.t1 MTR_1g026470 75.120 418 80 6 1 408 1 404 0.0 608
MS.gene61077.t1 MTR_1g026430 75.181 415 79 6 1 405 1 401 0.0 605
MS.gene61077.t1 MTR_3g088870 44.077 574 272 12 6 560 11 554 8.53e-161 470
MS.gene61077.t1 MTR_5g027480 44.956 565 290 7 4 564 8 555 1.67e-159 467
MS.gene61077.t1 MTR_4g057730 46.984 547 274 6 21 564 9 542 2.46e-159 466
MS.gene61077.t1 MTR_3g088880 44.464 569 274 11 6 560 12 552 4.97e-158 463
MS.gene61077.t1 MTR_5g027500 45.326 567 290 8 8 564 12 568 3.36e-155 456
MS.gene61077.t1 MTR_4g077900 46.951 492 243 6 77 564 1 478 8.88e-153 447
MS.gene61077.t1 MTR_2g095510 43.682 554 290 8 15 564 4 539 8.24e-148 436
MS.gene61077.t1 MTR_1g090737 45.276 561 275 14 6 557 22 559 2.02e-145 431
MS.gene61077.t1 MTR_1g063110 43.502 554 285 10 24 564 13 551 2.25e-143 425
MS.gene61077.t1 MTR_1g063120 43.964 555 285 13 24 564 13 555 3.43e-142 422
MS.gene61077.t1 MTR_1g073180 42.419 554 283 9 11 556 1 526 1.67e-135 405
MS.gene61077.t1 MTR_4g057730 45.798 476 242 6 21 493 9 471 2.86e-127 381
MS.gene61077.t1 MTR_1g073180 41.155 537 280 9 11 539 23 531 6.01e-123 372
MS.gene61077.t1 MTR_2g105570 39.746 551 303 12 23 560 12 546 2.46e-121 369
MS.gene61077.t1 MTR_4g128337 38.787 544 305 8 23 557 17 541 8.28e-119 362
MS.gene61077.t1 MTR_4g057730 45.154 454 233 6 21 471 9 449 8.59e-117 353
MS.gene61077.t1 MTR_5g007640 39.535 516 288 8 55 562 87 586 7.98e-116 356
MS.gene61077.t1 MTR_3g460770 34.884 559 328 11 17 564 8 541 1.04e-110 342
MS.gene61077.t1 MTR_4g005750 39.020 551 301 12 23 560 11 539 2.07e-109 338
MS.gene61077.t1 MTR_2g095510 40.998 461 250 8 15 471 4 446 8.41e-104 320
MS.gene61077.t1 MTR_1g026350 83.007 153 23 2 1 150 1 153 2.06e-82 255
MS.gene61077.t1 MTR_1569s0010 28.016 514 340 11 65 556 22 527 2.77e-53 189
MS.gene61077.t1 MTR_3g035130 29.541 501 315 13 65 554 32 505 1.56e-52 187
MS.gene61077.t1 MTR_2g044180 27.818 550 351 17 46 564 29 563 4.07e-47 173
MS.gene61077.t1 MTR_5g008800 27.255 521 334 14 65 562 40 538 7.40e-47 172
MS.gene61077.t1 MTR_4g121600 26.993 552 356 16 46 564 29 566 1.54e-45 169
MS.gene61077.t1 MTR_8g074040 27.462 528 326 14 65 562 82 582 2.60e-45 169
MS.gene61077.t1 MTR_3g064420 28.008 532 324 17 62 556 37 546 1.04e-44 167
MS.gene61077.t1 MTR_2g044180 29.907 428 267 14 158 564 57 472 8.01e-43 160
MS.gene61077.t1 MTR_5g076240 26.454 533 327 14 65 560 40 544 7.67e-42 159
MS.gene61077.t1 MTR_4g013210 29.457 387 232 12 208 563 69 445 1.14e-41 156
MS.gene61077.t1 MTR_3g035130 29.011 455 285 13 65 508 32 459 3.90e-41 155
MS.gene61077.t1 MTR_0803s0020 26.869 495 328 11 67 550 263 734 6.35e-41 159
MS.gene61077.t1 MTR_5g008820 25.292 514 327 14 65 550 40 524 9.92e-41 155
MS.gene61077.t1 MTR_4g011790 27.692 390 247 10 200 563 218 598 6.17e-40 154
MS.gene61077.t1 MTR_8g074040 27.500 480 291 14 113 562 12 464 2.81e-39 150
MS.gene61077.t1 MTR_4g011790 27.204 397 249 10 200 563 218 607 5.95e-38 148
MS.gene61077.t1 MTR_4g011790 27.513 378 239 10 200 551 218 586 2.70e-37 146
MS.gene61077.t1 MTR_8g074120 26.680 491 317 12 95 562 23 493 2.84e-36 142
MS.gene61077.t1 MTR_5g076220 26.667 525 337 13 65 560 40 545 1.27e-35 141
MS.gene61077.t1 MTR_4g013210 29.775 356 209 12 208 532 221 566 1.84e-35 140
MS.gene61077.t1 MTR_0161s0050 26.145 524 343 12 65 560 40 547 7.38e-35 139
MS.gene61077.t1 MTR_7g084850 24.678 543 367 15 52 564 194 724 8.77e-35 140
MS.gene61077.t1 MTR_5g023730 26.286 525 317 17 65 553 43 533 4.75e-34 136
MS.gene61077.t1 MTR_5g076200 26.266 533 329 14 65 560 40 545 5.42e-34 136
MS.gene61077.t1 MTR_4g013210 26.667 375 217 11 208 563 69 404 9.58e-30 121
MS.gene61077.t1 MTR_4g013210 26.667 375 217 11 208 563 221 556 2.78e-29 122
MS.gene61077.t1 MTR_2g030240 24.169 451 308 8 66 496 29 465 1.10e-25 111
MS.gene61077.t1 MTR_2g030240 26.733 303 205 5 208 496 72 371 1.86e-24 107
MS.gene61077.t1 MTR_1054s0020 23.913 506 343 15 62 558 294 766 5.32e-24 107
MS.gene61077.t1 MTR_4g057755 63.014 73 27 0 420 492 46 118 1.10e-22 94.0
MS.gene61077.t1 MTR_3g088890 60.938 64 25 0 466 529 10 73 2.40e-21 89.0
MS.gene61077.t1 MTR_1g104810 24.190 463 268 15 59 477 141 564 6.07e-21 97.4
MS.gene61077.t1 MTR_1g104810 24.190 463 268 15 59 477 74 497 6.67e-21 97.1
MS.gene61077.t1 MTR_1g030290 26.559 433 236 15 167 531 201 619 1.53e-20 96.3
MS.gene61077.t1 MTR_8g099420 25.060 415 241 16 207 556 222 631 2.67e-20 95.1
MS.gene61077.t1 MTR_3g087980 25.722 381 210 11 174 486 206 581 5.54e-20 94.4
MS.gene61077.t1 MTR_4g013210 26.148 283 161 9 208 481 221 464 1.23e-17 86.3
MS.gene61077.t1 MTR_4g066130 27.483 433 250 21 186 563 625 1048 2.23e-17 86.7
MS.gene61077.t1 MTR_1g086600 24.699 332 192 11 209 488 243 568 2.91e-17 85.9
MS.gene61077.t1 MTR_7g109830 23.800 479 280 19 52 465 62 520 3.78e-17 85.5
MS.gene61077.t1 MTR_4g013210 28.807 243 143 9 208 430 221 453 9.17e-17 83.6
MS.gene61077.t1 MTR_5g009360 28.012 332 179 14 207 486 95 418 1.67e-16 83.2
MS.gene61077.t1 MTR_5g009360 28.012 332 179 14 207 486 221 544 1.74e-16 83.2
MS.gene61077.t1 MTR_3g082660 25.075 335 179 11 210 480 283 609 2.61e-16 82.8
MS.gene61077.t1 MTR_4g068670 24.124 485 296 17 59 486 72 541 3.03e-16 82.4
MS.gene61077.t1 MTR_8g083170 34.078 179 103 4 333 500 457 631 2.69e-15 79.7
MS.gene61077.t1 MTR_5g009350 25.915 328 191 12 207 486 221 544 4.95e-15 78.6
MS.gene61077.t1 MTR_5g009350 25.836 329 192 12 206 486 220 544 4.98e-15 78.6
MS.gene61077.t1 MTR_5g009350 25.836 329 192 12 206 486 220 544 5.87e-15 78.2
MS.gene61077.t1 MTR_5g009350 25.836 329 192 12 206 486 220 544 6.32e-15 78.2
MS.gene61077.t1 MTR_2g098490 25.431 464 261 19 149 558 608 1040 8.62e-15 78.6
MS.gene61077.t1 MTR_3g084450 33.540 161 82 5 333 477 454 605 1.24e-13 74.3
MS.gene61077.t1 MTR_3g084470 31.522 184 101 5 333 500 450 624 1.25e-13 74.3
MS.gene61077.t1 MTR_3g084450 33.540 161 82 5 333 477 246 397 1.34e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61077.t1 AT1G20510 70.217 554 148 4 11 562 4 542 0.0 788
MS.gene61077.t1 AT1G20500 62.478 565 185 6 7 564 6 550 0.0 713
MS.gene61077.t1 AT1G20480 59.683 568 202 5 6 564 16 565 0.0 678
MS.gene61077.t1 AT1G20510 69.072 485 133 4 11 493 4 473 0.0 671
MS.gene61077.t1 AT5G38120 58.566 572 207 8 1 564 1 550 0.0 664
MS.gene61077.t1 AT1G20510 68.467 463 129 4 11 471 4 451 0.0 637
MS.gene61077.t1 AT5G38120 57.463 536 198 8 1 528 1 514 0.0 610
MS.gene61077.t1 AT5G38120 57.285 501 184 8 1 493 1 479 0.0 561
MS.gene61077.t1 AT5G38120 57.285 501 184 8 1 493 1 479 0.0 561
MS.gene61077.t1 AT1G20490 55.180 444 170 7 7 441 6 429 5.38e-168 484
MS.gene61077.t1 AT1G20490 55.180 444 170 7 7 441 6 429 5.38e-168 484
MS.gene61077.t1 AT5G63380 43.608 571 286 6 6 561 6 555 4.74e-167 486
MS.gene61077.t1 AT4G19010 42.274 563 305 9 7 564 15 562 1.36e-158 465
MS.gene61077.t1 AT4G05160 44.627 549 286 8 21 564 9 544 1.27e-154 454
MS.gene61077.t1 AT3G21240 39.522 544 310 7 18 556 17 546 1.00e-121 370
MS.gene61077.t1 AT1G65060 39.411 543 300 8 23 556 34 556 1.91e-115 354
MS.gene61077.t1 AT1G51680 39.261 568 316 9 1 560 12 558 1.67e-110 341
MS.gene61077.t1 AT3G21230 37.993 558 316 11 19 561 24 566 1.96e-110 341
MS.gene61077.t1 AT3G21230 36.654 532 302 11 19 535 24 535 7.25e-98 308
MS.gene61077.t1 AT1G62940 35.675 541 321 9 23 556 12 532 9.41e-97 305
MS.gene61077.t1 AT3G21240 37.552 482 282 7 18 494 17 484 5.12e-96 301
MS.gene61077.t1 AT3G21240 37.552 482 282 7 18 494 17 484 5.12e-96 301
MS.gene61077.t1 AT1G51680 37.383 535 307 8 1 528 12 525 6.11e-96 303
MS.gene61077.t1 AT3G21230 36.605 489 279 10 19 492 24 496 4.32e-88 281
MS.gene61077.t1 AT1G51680 37.275 499 285 8 1 492 12 489 8.18e-86 275
MS.gene61077.t1 AT1G65060 35.870 460 266 8 23 473 34 473 2.08e-76 250
MS.gene61077.t1 AT3G21230 32.057 418 255 10 19 422 24 426 8.91e-52 184
MS.gene61077.t1 AT3G48990 27.723 505 321 12 64 554 30 504 4.47e-48 175
MS.gene61077.t1 AT5G16370 29.412 527 327 15 65 564 41 549 4.78e-48 176
MS.gene61077.t1 AT5G16340 29.231 520 324 15 65 558 41 542 6.45e-48 175
MS.gene61077.t1 AT1G20560 28.235 510 329 14 65 553 42 535 7.53e-48 175
MS.gene61077.t1 AT1G21530 28.704 540 314 18 59 560 37 543 1.34e-47 174
MS.gene61077.t1 AT1G77240 28.676 544 328 17 54 562 25 543 6.51e-47 172
MS.gene61077.t1 AT1G21530 28.253 538 321 17 59 560 37 545 1.84e-46 171
MS.gene61077.t1 AT1G21540 29.135 532 313 17 66 562 46 548 3.05e-46 171
MS.gene61077.t1 AT1G75960 28.023 521 330 16 65 560 41 541 1.78e-44 166
MS.gene61077.t1 AT1G65890 28.272 573 332 22 36 560 11 552 1.82e-44 166
MS.gene61077.t1 AT1G66120 28.546 564 339 20 36 562 11 547 4.81e-44 165
MS.gene61077.t1 AT3G16910 26.397 519 343 13 65 556 48 554 4.82e-43 162
MS.gene61077.t1 AT1G65880 28.049 574 333 22 36 560 11 553 5.04e-43 162
MS.gene61077.t1 AT1G76290 27.413 518 333 16 64 560 39 534 6.53e-43 161
MS.gene61077.t1 AT1G20560 28.139 462 295 14 113 553 12 457 6.81e-41 154
MS.gene61077.t1 AT2G17650 26.391 557 366 17 34 560 55 597 3.21e-39 152
MS.gene61077.t1 AT5G36880 24.539 542 371 14 51 564 188 719 1.23e-33 136
MS.gene61077.t1 AT5G36880 24.539 542 371 14 51 564 138 669 1.26e-33 136
MS.gene61077.t1 AT5G36880 24.539 542 371 14 51 564 138 669 1.26e-33 136
MS.gene61077.t1 AT5G36880 24.539 542 371 14 51 564 138 669 1.26e-33 136
MS.gene61077.t1 AT5G36880 24.539 542 371 14 51 564 138 669 1.26e-33 136
MS.gene61077.t1 AT3G16170 26.316 380 240 11 208 558 234 602 1.36e-32 132
MS.gene61077.t1 AT1G30520 27.021 470 294 11 66 507 34 482 1.96e-32 131
MS.gene61077.t1 AT1G30520 27.021 470 294 11 66 507 34 482 1.96e-32 131
MS.gene61077.t1 AT1G68270 26.165 558 331 21 36 559 11 521 2.16e-32 131
MS.gene61077.t1 AT1G30520 26.164 451 281 12 66 488 34 460 9.24e-26 111
MS.gene61077.t1 AT1G30520 26.164 451 281 12 66 488 34 460 9.24e-26 111
MS.gene61077.t1 AT5G36880 23.769 467 321 13 51 492 138 594 3.99e-24 107
MS.gene61077.t1 AT1G64400 24.101 473 286 17 52 465 65 523 2.73e-20 95.5
MS.gene61077.t1 AT1G77590 27.485 342 176 10 209 486 100 433 1.23e-19 92.8
MS.gene61077.t1 AT1G77590 27.485 342 176 10 209 486 246 579 2.05e-19 92.8
MS.gene61077.t1 AT5G27600 27.445 317 173 10 208 477 261 567 3.69e-19 92.0
MS.gene61077.t1 AT1G49430 23.567 471 292 14 52 465 65 524 4.23e-17 85.5
MS.gene61077.t1 AT2G47240 25.836 329 190 11 209 488 221 544 9.41e-17 84.3
MS.gene61077.t1 AT2G47240 25.836 329 190 11 209 488 221 544 9.41e-17 84.3
MS.gene61077.t1 AT2G47240 25.836 329 190 11 209 488 221 544 9.41e-17 84.3
MS.gene61077.t1 AT2G47240 25.836 329 190 11 209 488 162 485 1.09e-16 84.0
MS.gene61077.t1 AT3G05970 26.837 313 180 9 208 477 261 567 1.20e-16 84.0
MS.gene61077.t1 AT4G11030 22.151 465 275 16 66 465 81 523 1.07e-14 77.8
MS.gene61077.t1 AT3G23790 26.587 252 171 5 65 306 111 358 1.23e-12 71.2
MS.gene61077.t1 AT3G23790 31.319 182 100 5 335 500 457 629 2.39e-11 67.0
MS.gene61077.t1 AT4G14070 23.585 318 221 7 3 306 65 374 4.32e-11 66.2
MS.gene61077.t1 AT4G14070 32.292 192 101 7 333 501 471 656 5.65e-11 65.9

Find 187 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGCCATTGAAAAGTTTA+AGG 0.135874 8.2:+60543306 MS.gene61077:CDS
GCTAACTCATCCTGCAATTT+TGG 0.152401 8.2:+60545597 MS.gene61077:CDS
AGGCGATGCTGCCTTGATTT+TGG 0.187811 8.2:-60542873 None:intergenic
AGCTCACCGGTCTGGTTAAC+TGG 0.218343 8.2:-60543643 None:intergenic
CTCCAACATGGGAATCAAAA+AGG 0.240880 8.2:+60542673 MS.gene61077:CDS
TGGTTCAAACTGTATCTTCT+AGG 0.243264 8.2:+60543137 MS.gene61077:CDS
GTAGAGTAGCTGTGTCTTCT+TGG 0.257071 8.2:-60543048 None:intergenic
TTCGCTGGGCTTCTCTCTTT+AGG 0.282480 8.2:+60543238 MS.gene61077:CDS
TACTGCCCAGCCTCCTTATC+TGG 0.284555 8.2:-60546354 None:intergenic
TCGGCTTCCATGAGAATAAT+TGG 0.285788 8.2:-60542902 None:intergenic
GTTGCCATTCTTCAAGGTTA+TGG 0.299320 8.2:+60543490 MS.gene61077:CDS
CACCGCATAACACCATATTT+AGG 0.306737 8.2:-60543414 None:intergenic
CTCTACTCATCTGGAACAAC+GGG 0.315176 8.2:+60543070 MS.gene61077:CDS
CCTTGAAGAATGGCAACATT+AGG 0.315840 8.2:-60543484 None:intergenic
GATAAAGGTGGTGGCATCTA+AGG 0.318164 8.2:-60542543 None:intergenic
GATTCTTATTTGTGGTTGAT+AGG 0.319356 8.2:+60544807 MS.gene61077:CDS
CATGTCATGCATTTCGAACT+TGG 0.321212 8.2:-60543281 None:intergenic
TGACTTGAGTTCCCTAAATA+TGG 0.329156 8.2:+60543402 MS.gene61077:CDS
CCTAATGTTGCCATTCTTCA+AGG 0.342791 8.2:+60543484 MS.gene61077:CDS
ACACACCACAGGGAAGTAAA+TGG 0.353482 8.2:-60542726 None:intergenic
GTTGAGCATAGCAACCAATA+TGG 0.354981 8.2:-60543353 None:intergenic
TTTGGTCCACATGTCATCAT+AGG 0.356686 8.2:-60542984 None:intergenic
AATTAAATACAAGGGGTATC+AGG 0.358754 8.2:+60544841 MS.gene61077:CDS
GAGCTACAAAACCCACTTGT+TGG 0.359716 8.2:-60542467 None:intergenic
CTCACAGAATCCTTTGGAGC+TGG 0.368763 8.2:+60543514 MS.gene61077:CDS
ATTCCCATGTTTCACATATA+CGG 0.370767 8.2:+60543205 MS.gene61077:CDS
TTTGTCCGGTCCAGAACTTT+TGG 0.377948 8.2:-60543002 None:intergenic
TGGTTGACTTGCTCTCTCAT+TGG 0.384100 8.2:-60543028 None:intergenic
ACCGCATAACACCATATTTA+GGG 0.385637 8.2:-60543413 None:intergenic
GTGGCATCTAAGGACTGATT+TGG 0.387656 8.2:-60542533 None:intergenic
ATGGGCGCGGGAGGAGATAA+AGG 0.388513 8.2:-60542558 None:intergenic
ATCATTGTTGACACTGAAAC+TGG 0.390741 8.2:+60543610 MS.gene61077:CDS
CTTGAAGAATGGCAACATTA+GGG 0.399688 8.2:-60543483 None:intergenic
GGGATTGGTGGTGGTGATGA+TGG 0.407542 8.2:-60542771 None:intergenic
ACCGCTTGTACCGCCCATAT+TGG 0.410225 8.2:+60543339 MS.gene61077:CDS
GCAGAGGGTTGGCTAAGAAC+TGG 0.411425 8.2:+60544758 MS.gene61077:CDS
AGATGGAGCACGATGGGAAT+AGG 0.422814 8.2:+60542429 None:intergenic
ATCCATCTGGTAAAATTCTT+CGG 0.423771 8.2:+60546655 MS.gene61077:CDS
TCACAGAATCCTTTGGAGCT+GGG 0.423849 8.2:+60543515 MS.gene61077:CDS
TATGGTCTCACAGAATCCTT+TGG 0.427916 8.2:+60543508 MS.gene61077:CDS
TATGGAATTTGTTGCAGCCC+AGG 0.428627 8.2:+60546431 MS.gene61077:CDS
TTAACCAGACCGGTGAGCTT+TGG 0.429385 8.2:+60543647 MS.gene61077:CDS
TGTAAAGGCGAGGACAGGTT+TGG 0.429436 8.2:-60542834 None:intergenic
GGTGAAGTGGTGGCCGGTGG+AGG 0.431493 8.2:-60542606 None:intergenic
AGTCGTAAGTACGGCACGGC+GGG 0.433502 8.2:+60543562 MS.gene61077:CDS
TGTGTTGAGGGGATTGGTGG+TGG 0.436188 8.2:-60542780 None:intergenic
TACTCTTCCAATTATTCTCA+TGG 0.441050 8.2:+60542895 MS.gene61077:CDS
AGACCGGTGAGCTTTGGCTC+AGG 0.441748 8.2:+60543653 MS.gene61077:CDS
GCTACTCTACTCTACTCATC+TGG 0.447509 8.2:+60543061 MS.gene61077:CDS
GACATGTGGACCAAAAGTTC+TGG 0.447652 8.2:+60542992 MS.gene61077:CDS
TACGGTCTAGCAATGTTCGC+TGG 0.453295 8.2:+60543223 MS.gene61077:CDS
ACAGGGAAGTAAATGGAGTT+AGG 0.454014 8.2:-60542719 None:intergenic
CTGCAACAAATTCCATAACT+TGG 0.455674 8.2:-60546425 None:intergenic
GACCGGTGAGCTTTGGCTCA+GGG 0.459780 8.2:+60543654 MS.gene61077:CDS
TAGTGATGGATTCTTATTTG+TGG 0.459992 8.2:+60544799 MS.gene61077:CDS
CTGATTTGGAGGAAGTAGGA+GGG 0.461722 8.2:-60542519 None:intergenic
TAAATATGGTGTTATGCGGT+GGG 0.468767 8.2:+60543416 MS.gene61077:CDS
CACAGAATCCTTTGGAGCTG+GGG 0.472648 8.2:+60543516 MS.gene61077:CDS
CTTTGCTATATTGATAGTGA+TGG 0.473126 8.2:+60544785 MS.gene61077:CDS
AGCTATCCAGATAAGGAGGC+TGG 0.473314 8.2:+60546348 MS.gene61077:intron
TGGAGTTAGGAGAGAGAAGG+AGG 0.474952 8.2:-60542706 None:intergenic
CGATTTCACGTACTGTGTTG+AGG 0.475649 8.2:-60542793 None:intergenic
GGCAGGTTATTTAAATAATG+AGG 0.477455 8.2:+60544712 MS.gene61077:intron
GAGTTTAGAAGTAGCGAGCT+TGG 0.479761 8.2:-60546688 None:intergenic
TTAGCCAACCCTCTGCAGTA+AGG 0.482826 8.2:-60544751 None:intergenic
CAGTGTGGCCGTGATGGGCG+CGG 0.484862 8.2:-60542571 None:intergenic
GATTTCACGTACTGTGTTGA+GGG 0.485874 8.2:-60542792 None:intergenic
CAGAGGGTTGGCTAAGAACT+GGG 0.486461 8.2:+60544759 MS.gene61077:CDS
TGAGCCAAAGCTCACCGGTC+TGG 0.490472 8.2:-60543651 None:intergenic
ACAGCACCATCCAAAATTGC+AGG 0.490623 8.2:-60545607 None:intergenic
TTCCTTACCACATATGCCAT+TGG 0.491549 8.2:-60546378 None:intergenic
CAGTTTGAACCATTGCTATG+AGG 0.492937 8.2:-60543126 None:intergenic
ACCTCCTCTCTCTCCAACAT+GGG 0.494221 8.2:+60542662 MS.gene61077:CDS
CGGGTTGTAAAGGCGAGGAC+AGG 0.496292 8.2:-60542839 None:intergenic
ACTGATTTGGAGGAAGTAGG+AGG 0.500488 8.2:-60542520 None:intergenic
CATGTCAGAAAGCCAAGTTA+TGG 0.500528 8.2:+60546413 MS.gene61077:CDS
AGAGGAGGTGACAGCGTCGA+CGG 0.501433 8.2:-60542648 None:intergenic
CACCTCCTCTCTCTCCAACA+TGG 0.501542 8.2:+60542661 MS.gene61077:CDS
GGCTGTCCAGAGTTGTTTGT+AGG 0.505785 8.2:-60542627 None:intergenic
AACAAAGCCTCTAGTTCAGC+TGG 0.506608 8.2:-60545574 None:intergenic
GCATATGTGGTAAGGAAGGA+TGG 0.507729 8.2:+60546384 MS.gene61077:CDS
ACGTACTGTGTTGAGGGGAT+TGG 0.509970 8.2:-60542786 None:intergenic
AACGAGGGGACGGGTTGTAA+AGG 0.510067 8.2:-60542849 None:intergenic
TTGAGCATAGCAACCAATAT+GGG 0.510556 8.2:-60543352 None:intergenic
TGTCTCAGTGTCATTTCCCT+CGG 0.514271 8.2:+60542746 MS.gene61077:CDS
TCCCCTCGTTTCCAAAATCA+AGG 0.516311 8.2:+60542862 MS.gene61077:CDS
TGAAAGCAGTGTGGCCGTGA+TGG 0.523098 8.2:-60542577 None:intergenic
TACTGTGTTGAGGGGATTGG+TGG 0.525298 8.2:-60542783 None:intergenic
TTTGTAGGTGAAGTGGTGGC+CGG 0.526148 8.2:-60542612 None:intergenic
TAGCCAACCCTCTGCAGTAA+GGG 0.530390 8.2:-60544750 None:intergenic
CTAAATATGGTGTTATGCGG+TGG 0.531565 8.2:+60543415 MS.gene61077:CDS
TATGTATAGCTATCCAGATA+AGG 0.531987 8.2:+60546341 MS.gene61077:intron
ATTCAATCTTCTACAGCAAG+AGG 0.535092 8.2:+60542492 MS.gene61077:CDS
ATCCAATGGCATATGTGGTA+AGG 0.535777 8.2:+60546376 MS.gene61077:CDS
AGTTGAAGCCCCAGCTCCAA+AGG 0.537059 8.2:-60543524 None:intergenic
ACCCCTGAGCCAAAGCTCAC+CGG 0.538756 8.2:-60543656 None:intergenic
GCATCTAAGGACTGATTTGG+AGG 0.539542 8.2:-60542530 None:intergenic
GAAAGCAGTGTGGCCGTGAT+GGG 0.541099 8.2:-60542576 None:intergenic
ACTTCACCTACAAACAACTC+TGG 0.542475 8.2:+60542621 MS.gene61077:CDS
AGTGTGGCCGTGATGGGCGC+GGG 0.545478 8.2:-60542570 None:intergenic
GGTGGTGATGATGGCGCCGA+GGG 0.548903 8.2:-60542762 None:intergenic
GCTCACCGGTCTGGTTAACT+GGG 0.548944 8.2:-60543642 None:intergenic
GATTCCCATGTTGGAGAGAG+AGG 0.548952 8.2:-60542666 None:intergenic
ACTCTACTCATCTGGAACAA+CGG 0.551121 8.2:+60543069 MS.gene61077:CDS
GAAAGAGCTAATTAAATACA+AGG 0.551275 8.2:+60544832 MS.gene61077:CDS
TGATTTGGAGGAAGTAGGAG+GGG 0.551329 8.2:-60542518 None:intergenic
AGCAGAATCAATCCAACAAG+TGG 0.551709 8.2:+60542455 MS.gene61077:CDS
GCAGTATCCAATGGCATATG+TGG 0.553901 8.2:+60546371 MS.gene61077:CDS
AGGACTGATTTGGAGGAAGT+AGG 0.554979 8.2:-60542523 None:intergenic
ACGGTCTAGCAATGTTCGCT+GGG 0.555238 8.2:+60543224 MS.gene61077:CDS
AAATGGAGTTAGGAGAGAGA+AGG 0.560453 8.2:-60542709 None:intergenic
ATCTGGTAAAATTCTTCGGA+GGG 0.562325 8.2:+60546659 MS.gene61077:CDS
ATGAGAATAATTGGAAGAGT+AGG 0.563439 8.2:-60542893 None:intergenic
ATATTGAGATGGAGCACGAT+GGG 0.564263 8.2:+60542423 None:intergenic
TCTGTAACCTCTTTGCTGAG+AGG 0.564949 8.2:-60543442 None:intergenic
AAAAGACAAACCTTTCATGA+TGG 0.565361 8.2:-60543683 None:intergenic
TAATGACGAAGAATATGAGC+GGG 0.565586 8.2:+60543162 MS.gene61077:CDS
ACCGGTGAGCTTTGGCTCAG+GGG 0.566725 8.2:+60543655 MS.gene61077:CDS
ACCAATATGGGCGGTACAAG+CGG 0.569305 8.2:-60543340 None:intergenic
GTGGCCGTGATGGGCGCGGG+AGG 0.569540 8.2:-60542567 None:intergenic
CTCAGCAAAGAGGTTACAGA+AGG 0.569723 8.2:+60543445 MS.gene61077:CDS
AGAGTTGTTTGTAGGTGAAG+TGG 0.569801 8.2:-60542619 None:intergenic
ATCTCCTCCCGCGCCCATCA+CGG 0.570448 8.2:+60542563 MS.gene61077:CDS
GTGGACCAAAAGTTCTGGAC+CGG 0.574866 8.2:+60542997 MS.gene61077:CDS
GGAACAACGGGGCCTAGCAA+AGG 0.580215 8.2:+60543082 MS.gene61077:CDS
TTAGATGAGAGTCGTAAGTA+CGG 0.580230 8.2:+60543553 MS.gene61077:CDS
GAGACCATAACCTTGAAGAA+TGG 0.582202 8.2:-60543494 None:intergenic
GCGGGAGGAGATAAAGGTGG+TGG 0.587456 8.2:-60542552 None:intergenic
GAGGACATGATGAAGAAAGA+AGG 0.589504 8.2:+60542956 MS.gene61077:CDS
ATGACACTGAGACACACCAC+AGG 0.590967 8.2:-60542737 None:intergenic
ATTATTCTCATGGAAGCCGA+TGG 0.594085 8.2:+60542905 MS.gene61077:CDS
CATCTGGTAAAATTCTTCGG+AGG 0.595605 8.2:+60546658 MS.gene61077:CDS
AATGGCATATGTGGTAAGGA+AGG 0.598196 8.2:+60546380 MS.gene61077:CDS
GGTCCCTCCAGCTGAACTAG+AGG 0.600876 8.2:+60545567 MS.gene61077:intron
GCTTTCATCGACGCCTCCAC+CGG 0.601461 8.2:+60542593 MS.gene61077:CDS
TGATGATGTCGAGTTCCCAT+CGG 0.602679 8.2:-60542921 None:intergenic
AAAGAGCTAATTAAATACAA+GGG 0.603340 8.2:+60544833 MS.gene61077:CDS
GCTATCCAGATAAGGAGGCT+GGG 0.604731 8.2:+60546349 MS.gene61077:intron
TGGTGGTGATGATGGCGCCG+AGG 0.605849 8.2:-60542763 None:intergenic
AGGGGTCCTACCATCATGAA+AGG 0.608266 8.2:+60543673 MS.gene61077:CDS
AAATCAACCCTTACTGCAGA+GGG 0.608690 8.2:+60544743 MS.gene61077:CDS
ATTTCACGTACTGTGTTGAG+GGG 0.610197 8.2:-60542791 None:intergenic
GTCAATCCTATGATGACATG+TGG 0.610834 8.2:+60542978 MS.gene61077:CDS
TAGACCGTATATGTGAAACA+TGG 0.611992 8.2:-60543209 None:intergenic
GAAGATACTACTCCTTTGCT+AGG 0.612380 8.2:-60543094 None:intergenic
TTATTCTCATGGAAGCCGAT+GGG 0.618658 8.2:+60542906 MS.gene61077:CDS
GTAGGTGAAGTGGTGGCCGG+TGG 0.618668 8.2:-60542609 None:intergenic
GTCGTAAGTACGGCACGGCG+GGG 0.620732 8.2:+60543563 MS.gene61077:CDS
CAACCCTTACTGCAGAGGGT+TGG 0.621353 8.2:+60544747 MS.gene61077:CDS
TAACTCCATTTACTTCCCTG+TGG 0.626740 8.2:+60542721 MS.gene61077:CDS
ACATAGAAACCTCATAGCAA+TGG 0.627190 8.2:+60543117 MS.gene61077:CDS
CTGCTCCCAGTTAACCAGAC+CGG 0.629599 8.2:+60543637 MS.gene61077:CDS
GACATCATCATCAAACACAC+TGG 0.632350 8.2:+60542934 MS.gene61077:CDS
AAATATGGTGTTATGCGGTG+GGG 0.633272 8.2:+60543417 MS.gene61077:CDS
GGAGGCTGGGCAGTATCCAA+TGG 0.633360 8.2:+60546362 MS.gene61077:CDS
GCAGAATCAATCCAACAAGT+GGG 0.638311 8.2:+60542456 MS.gene61077:CDS
GTATAGCTATCCAGATAAGG+AGG 0.640405 8.2:+60546344 MS.gene61077:intron
AGACCGTATATGTGAAACAT+GGG 0.640574 8.2:-60543208 None:intergenic
AAGAGCTAATTAAATACAAG+GGG 0.641036 8.2:+60544834 MS.gene61077:CDS
AGGTTATTTAAATAATGAGG+AGG 0.643847 8.2:+60544715 MS.gene61077:intron
AAAGCCTCTAGTTCAGCTGG+AGG 0.643862 8.2:-60545571 None:intergenic
GATATTGAGATGGAGCACGA+TGG 0.644594 8.2:+60542422 None:intergenic
TAAATCAACCCTTACTGCAG+AGG 0.647491 8.2:+60544742 MS.gene61077:CDS
AACAATGATAGCCTCAGTGG+AGG 0.647619 8.2:-60543596 None:intergenic
TCCCTAAATATGGTGTTATG+CGG 0.653366 8.2:+60543412 MS.gene61077:CDS
AAGCCTCTAGTTCAGCTGGA+GGG 0.656701 8.2:-60545570 None:intergenic
GAACTTGGAGAGAACGACGA+TGG 0.658132 8.2:-60543266 None:intergenic
TGGGGCTCCTCTCAGCAAAG+AGG 0.665361 8.2:+60543435 MS.gene61077:CDS
ATCATCATCAAACACACTGG+AGG 0.669966 8.2:+60542937 MS.gene61077:CDS
GACAAACCTTTCATGATGGT+AGG 0.670435 8.2:-60543679 None:intergenic
TGAAATCGCAAAACAGATCG+CGG 0.670658 8.2:+60542808 MS.gene61077:CDS
GTCAACAATGATAGCCTCAG+TGG 0.671199 8.2:-60543599 None:intergenic
GTTGTTTGTAGGTGAAGTGG+TGG 0.672725 8.2:-60542616 None:intergenic
TCCCATGTTGGAGAGAGAGG+AGG 0.674861 8.2:-60542663 None:intergenic
ATATGGGCGGTACAAGCGGT+AGG 0.676986 8.2:-60543336 None:intergenic
AGCATAGCAACCAATATGGG+CGG 0.683092 8.2:-60543349 None:intergenic
TCAGCAAAGAGGTTACAGAA+GGG 0.687926 8.2:+60543446 MS.gene61077:CDS
GGGGACGGGTTGTAAAGGCG+AGG 0.691124 8.2:-60542844 None:intergenic
TTAATGACGAAGAATATGAG+CGG 0.698072 8.2:+60543161 MS.gene61077:CDS
GGCGCGGGAGGAGATAAAGG+TGG 0.699855 8.2:-60542555 None:intergenic
TGAGAGTCGTAAGTACGGCA+CGG 0.707187 8.2:+60543558 MS.gene61077:CDS
AGAGGGTTGGCTAAGAACTG+GGG 0.714900 8.2:+60544760 MS.gene61077:CDS
GAGTCGTAAGTACGGCACGG+CGG 0.718486 8.2:+60543561 MS.gene61077:CDS
TGACACTGAGACACACCACA+GGG 0.725682 8.2:-60542736 None:intergenic
AATGACGAAGAATATGAGCG+GGG 0.743826 8.2:+60543163 MS.gene61077:CDS
AGGCGTCGATGAAAGCAGTG+TGG 0.757006 8.2:-60542586 None:intergenic
TCTACTCATCTGGAACAACG+GGG 0.774289 8.2:+60543071 MS.gene61077:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTATATCAAATTATTAA+CGG + chr8.2:60543932-60543951 MS.gene61077:intron 10.0%
!!! CATTTTATAATTATTTTTCA+TGG + chr8.2:60545703-60545722 MS.gene61077:intron 10.0%
!!! TATTTTTGTATAAAAATATG+AGG + chr8.2:60545641-60545660 MS.gene61077:intron 10.0%
!!! TTTTTATACAAAAATACTTA+CGG - chr8.2:60545637-60545656 None:intergenic 10.0%
!! AATAACTTTACGAATTTATA+AGG + chr8.2:60544218-60544237 MS.gene61077:intron 15.0%
!! ATAATCTTTGGTATAAATTA+AGG - chr8.2:60545781-60545800 None:intergenic 15.0%
!! TAATCTTTGGTATAAATTAA+GGG - chr8.2:60545780-60545799 None:intergenic 15.0%
!! TTTATATCATAAGATTTCAT+AGG + chr8.2:60543997-60544016 MS.gene61077:intron 15.0%
!!! AGTATTTTTTTTTTTTTGAG+AGG + chr8.2:60544923-60544942 MS.gene61077:intron 15.0%
!!! ATCTTATTAAGCTTTATTAT+TGG - chr8.2:60545171-60545190 None:intergenic 15.0%
!!! ATTATTTATTTTATTCGAGT+AGG + chr8.2:60546219-60546238 MS.gene61077:intron 15.0%
!!! GATTTTTTTTTTAATGTTAC+AGG + chr8.2:60545546-60545565 MS.gene61077:intron 15.0%
!!! TACTAATTATTTTTTATGCA+TGG + chr8.2:60546568-60546587 MS.gene61077:intron 15.0%
!!! TCATTTTTTCACTATAATTT+AGG + chr8.2:60543716-60543735 MS.gene61077:intron 15.0%
!!! TTGAATCAAACAATTTTTTA+CGG - chr8.2:60544372-60544391 None:intergenic 15.0%
!! AAAGAGCTAATTAAATACAA+GGG + chr8.2:60544833-60544852 MS.gene61077:CDS 20.0%
!! AACAAAAGCAAAATATTGTA+AGG + chr8.2:60545059-60545078 MS.gene61077:intron 20.0%
!! ACAAAAGCAAAATATTGTAA+GGG + chr8.2:60545060-60545079 MS.gene61077:intron 20.0%
!! ATTTATTAAAGTAGCATTGT+TGG + chr8.2:60545679-60545698 MS.gene61077:intron 20.0%
!! GATGTGATTTATTGAATTAA+AGG + chr8.2:60544131-60544150 MS.gene61077:intron 20.0%
!! TACAAGTAACCTATTATAAT+TGG + chr8.2:60546161-60546180 MS.gene61077:intron 20.0%
!! TCAATTTAGCCAATTATAAT+AGG - chr8.2:60546173-60546192 None:intergenic 20.0%
!! TTATACCAAAGATTATATGT+TGG + chr8.2:60545785-60545804 MS.gene61077:intron 20.0%
!! TTTAATTAACGTCAAAGATA+TGG + chr8.2:60544685-60544704 MS.gene61077:intron 20.0%
!!! AATATTTTGCTTTTGTTTTC+CGG - chr8.2:60545056-60545075 None:intergenic 20.0%
!!! ATATTTCGTTTTTGTGTTTT+TGG - chr8.2:60544949-60544968 None:intergenic 20.0%
!!! ATGAGTTTAACTTGTTAAAT+TGG + chr8.2:60546535-60546554 MS.gene61077:intron 20.0%
!!! ATGTACAATTAAATTAGTCT+TGG - chr8.2:60544180-60544199 None:intergenic 20.0%
!!! CATTTGTTTCTTTTGAAAAA+TGG - chr8.2:60546253-60546272 None:intergenic 20.0%
!!! TTATTAAGCTTTATTATTGG+TGG - chr8.2:60545168-60545187 None:intergenic 20.0%
! AAATAGTGTTTGTGTTTGAT+AGG - chr8.2:60543840-60543859 None:intergenic 25.0%
! AAGAGAAATACTTTCTTGTA+TGG + chr8.2:60544274-60544293 MS.gene61077:intron 25.0%
! AAGAGCTAATTAAATACAAG+GGG + chr8.2:60544834-60544853 MS.gene61077:CDS 25.0%
! ACACTAAAGTCCTAAAAAAA+TGG + chr8.2:60544299-60544318 MS.gene61077:intron 25.0%
! ACTAAATGATTAAACTCAAG+TGG - chr8.2:60544447-60544466 None:intergenic 25.0%
! ACTATAAAGATAGATTCAAG+AGG - chr8.2:60544885-60544904 None:intergenic 25.0%
! AGGTTATTTAAATAATGAGG+AGG + chr8.2:60544715-60544734 MS.gene61077:intron 25.0%
! CACTAAAGTCCTAAAAAAAT+GGG + chr8.2:60544300-60544319 MS.gene61077:intron 25.0%
! CTAAATCATCTTCTTTGTAT+GGG - chr8.2:60545093-60545112 None:intergenic 25.0%
! CTTCTAAATACACCAAATAT+CGG + chr8.2:60545246-60545265 MS.gene61077:intron 25.0%
! GAAAATATGAAAGTTGTTTG+AGG + chr8.2:60545945-60545964 MS.gene61077:intron 25.0%
! GAAAGAGCTAATTAAATACA+AGG + chr8.2:60544832-60544851 MS.gene61077:CDS 25.0%
! GACCAAACTTCATATTATTA+TGG - chr8.2:60544327-60544346 None:intergenic 25.0%
! GACCATAATAATATGAAGTT+TGG + chr8.2:60544322-60544341 MS.gene61077:intron 25.0%
! GCTTAATAAGATCTAGTAAT+TGG + chr8.2:60545179-60545198 MS.gene61077:intron 25.0%
! GTAGAAAATAAAGTTGTGTA+TGG + chr8.2:60544153-60544172 MS.gene61077:intron 25.0%
! TACTACAATTGTGATTTCTT+TGG - chr8.2:60545419-60545438 None:intergenic 25.0%
! TAGTAAAAAAAACTTGTGCA+TGG - chr8.2:60544072-60544091 None:intergenic 25.0%
! TATTCTATCTATGCTAATCA+TGG + chr8.2:60544654-60544673 MS.gene61077:intron 25.0%
! TCATATCACATTTGATTCAA+TGG - chr8.2:60544113-60544132 None:intergenic 25.0%
! TCTAAATCATCTTCTTTGTA+TGG - chr8.2:60545094-60545113 None:intergenic 25.0%
! TTGAAGTCGTAATAAAAGTT+AGG + chr8.2:60545124-60545143 MS.gene61077:intron 25.0%
! TTTATTACGACTTCAATTCA+TGG - chr8.2:60545120-60545139 None:intergenic 25.0%
!! ACTATAATTTAGGAGTGTAT+TGG + chr8.2:60543726-60543745 MS.gene61077:intron 25.0%
!! ACTTTTCGAATTCTTTTGTA+CGG - chr8.2:60546609-60546628 None:intergenic 25.0%
!! TTTTTATGCATGGATTTTAC+AGG + chr8.2:60546578-60546597 MS.gene61077:intron 25.0%
!!! AATTTTACCAGATGGATTTT+TGG - chr8.2:60546652-60546671 None:intergenic 25.0%
!!! ATCTAAAGCTTTATTCACTT+AGG - chr8.2:60544590-60544609 None:intergenic 25.0%
!!! ATTTTACCAGATGGATTTTT+GGG - chr8.2:60546651-60546670 None:intergenic 25.0%
!!! GCACAAGTTTTTTTTACTAT+TGG + chr8.2:60544073-60544092 MS.gene61077:intron 25.0%
!!! TATTATGGTCCCATTTTTTT+AGG - chr8.2:60544312-60544331 None:intergenic 25.0%
AAAAGACAAACCTTTCATGA+TGG - chr8.2:60543686-60543705 None:intergenic 30.0%
ACAAGTTAAACTCATAATCC+AGG - chr8.2:60546530-60546549 None:intergenic 30.0%
AGATTTCATAGGATGTGAAT+TGG + chr8.2:60544008-60544027 MS.gene61077:intron 30.0%
ATCCATCTGGTAAAATTCTT+CGG + chr8.2:60546655-60546674 MS.gene61077:CDS 30.0%
ATGAGAATAATTGGAAGAGT+AGG - chr8.2:60542896-60542915 None:intergenic 30.0%
ATTCCCATGTTTCACATATA+CGG + chr8.2:60543205-60543224 MS.gene61077:CDS 30.0%
CATAGAAACAAGACATTCAA+AGG - chr8.2:60546325-60546344 None:intergenic 30.0%
GAATTGCACTATCAATATGT+GGG - chr8.2:60545865-60545884 None:intergenic 30.0%
GACTTAATTGTGAATCAAGA+TGG - chr8.2:60546303-60546322 None:intergenic 30.0%
GATTTCATAGGATGTGAATT+GGG + chr8.2:60544009-60544028 MS.gene61077:intron 30.0%
GGCAGGTTATTTAAATAATG+AGG + chr8.2:60544712-60544731 MS.gene61077:intron 30.0%
GTAATTTCACTCATTGCAAT+TGG + chr8.2:60546052-60546071 MS.gene61077:intron 30.0%
TACTCTTCCAATTATTCTCA+TGG + chr8.2:60542895-60542914 MS.gene61077:CDS 30.0%
TATGTATAGCTATCCAGATA+AGG + chr8.2:60546341-60546360 MS.gene61077:intron 30.0%
TATTGTCTTAAAGTGTGATC+TGG - chr8.2:60545276-60545295 None:intergenic 30.0%
TGAATTGCACTATCAATATG+TGG - chr8.2:60545866-60545885 None:intergenic 30.0%
TGTTCCAAATTAACAAACCT+GGG - chr8.2:60546451-60546470 None:intergenic 30.0%
TTAATGACGAAGAATATGAG+CGG + chr8.2:60543161-60543180 MS.gene61077:CDS 30.0%
TTCAGCCATTGAAAAGTTTA+AGG + chr8.2:60543306-60543325 MS.gene61077:CDS 30.0%
TTGATAGACAAGAATAAACG+TGG + chr8.2:60543758-60543777 MS.gene61077:intron 30.0%
TTGATTCAAGAATCAAACTC+AGG + chr8.2:60544383-60544402 MS.gene61077:intron 30.0%
TTGCACCAACATATAATCTT+TGG - chr8.2:60545793-60545812 None:intergenic 30.0%
! GATTCTTATTTGTGGTTGAT+AGG + chr8.2:60544807-60544826 MS.gene61077:CDS 30.0%
! GTGATTTCTTTGGTAGTATT+TGG - chr8.2:60545409-60545428 None:intergenic 30.0%
!! AATTAAATACAAGGGGTATC+AGG + chr8.2:60544841-60544860 MS.gene61077:CDS 30.0%
!! ATTTTAATCACATTTGCACC+TGG + chr8.2:60546509-60546528 MS.gene61077:intron 30.0%
!! CTTTGCTATATTGATAGTGA+TGG + chr8.2:60544785-60544804 MS.gene61077:CDS 30.0%
!! TAGTGATGGATTCTTATTTG+TGG + chr8.2:60544799-60544818 MS.gene61077:CDS 30.0%
!! TTAAGCTTTATTATTGGTGG+TGG - chr8.2:60545165-60545184 None:intergenic 30.0%
ACATAGAAACCTCATAGCAA+TGG + chr8.2:60543117-60543136 MS.gene61077:CDS 35.0%
ACCGCATAACACCATATTTA+GGG - chr8.2:60543416-60543435 None:intergenic 35.0%
ACCTATAAGTGCAGTGTATA+TGG - chr8.2:60546087-60546106 None:intergenic 35.0%
AGACCGTATATGTGAAACAT+GGG - chr8.2:60543211-60543230 None:intergenic 35.0%
ATCATTGTTGACACTGAAAC+TGG + chr8.2:60543610-60543629 MS.gene61077:CDS 35.0%
ATCTGGTAAAATTCTTCGGA+GGG + chr8.2:60546659-60546678 MS.gene61077:CDS 35.0%
ATTACGACTTCAATTCATGG+TGG - chr8.2:60545117-60545136 None:intergenic 35.0%
ATTCAATCTTCTACAGCAAG+AGG + chr8.2:60542492-60542511 MS.gene61077:CDS 35.0%
CTTGAAGAATGGCAACATTA+GGG - chr8.2:60543486-60543505 None:intergenic 35.0%
GGTATACACCCAAAATACTA+GGG - chr8.2:60546282-60546301 None:intergenic 35.0%
GTGTTCCAAATTAACAAACC+TGG - chr8.2:60546452-60546471 None:intergenic 35.0%
GTTTGTGATTGCAAGTCTAT+TGG + chr8.2:60545461-60545480 MS.gene61077:intron 35.0%
TAACGTCAAAGATATGGTGA+TGG + chr8.2:60544691-60544710 MS.gene61077:intron 35.0%
TAATGACGAAGAATATGAGC+GGG + chr8.2:60543162-60543181 MS.gene61077:CDS 35.0%
TAGACCGTATATGTGAAACA+TGG - chr8.2:60543212-60543231 None:intergenic 35.0%
TCCAACATGGGAATCAAAAA+GGG + chr8.2:60542674-60542693 MS.gene61077:CDS 35.0%
TCCATATACACTGCACTTAT+AGG + chr8.2:60546083-60546102 MS.gene61077:intron 35.0%
TGACTTGAGTTCCCTAAATA+TGG + chr8.2:60543402-60543421 MS.gene61077:CDS 35.0%
TGGTATACACCCAAAATACT+AGG - chr8.2:60546283-60546302 None:intergenic 35.0%
TGGTTCAAACTGTATCTTCT+AGG + chr8.2:60543137-60543156 MS.gene61077:CDS 35.0%
TTAGATGAGAGTCGTAAGTA+CGG + chr8.2:60543553-60543572 MS.gene61077:CDS 35.0%
TTCAACGTGATCATATGTGT+TGG - chr8.2:60543907-60543926 None:intergenic 35.0%
TTGAGCATAGCAACCAATAT+GGG - chr8.2:60543355-60543374 None:intergenic 35.0%
! AGGTTTTCATGAGTTTAGGA+AGG - chr8.2:60545311-60545330 None:intergenic 35.0%
! ATGCTACATCCCTAGTATTT+TGG + chr8.2:60546270-60546289 MS.gene61077:intron 35.0%
! CGTGACCTTAAACTTTTCAA+TGG - chr8.2:60543314-60543333 None:intergenic 35.0%
! GTAGAGAGAGTATACATTAC+AGG + chr8.2:60545014-60545033 MS.gene61077:intron 35.0%
! TACTCTCTCTACTTCCTTTT+AGG - chr8.2:60545006-60545025 None:intergenic 35.0%
! TGCTACATCCCTAGTATTTT+GGG + chr8.2:60546271-60546290 MS.gene61077:intron 35.0%
! TTATGCATGGATTTTACAGG+TGG + chr8.2:60546581-60546600 MS.gene61077:intron 35.0%
!! AAAACTCTCTTTGAAGCACA+AGG + chr8.2:60544976-60544995 MS.gene61077:intron 35.0%
!! AAGGGGTATCAGGTTATAAT+CGG + chr8.2:60544851-60544870 MS.gene61077:intron 35.0%
!! TAAATATGGTGTTATGCGGT+GGG + chr8.2:60543416-60543435 MS.gene61077:CDS 35.0%
!! TCCCTAAATATGGTGTTATG+CGG + chr8.2:60543412-60543431 MS.gene61077:CDS 35.0%
AAATCAACCCTTACTGCAGA+GGG + chr8.2:60544743-60544762 MS.gene61077:CDS 40.0%
AAATGGAGTTAGGAGAGAGA+AGG - chr8.2:60542712-60542731 None:intergenic 40.0%
AATGACGAAGAATATGAGCG+GGG + chr8.2:60543163-60543182 MS.gene61077:CDS 40.0%
AATGGCATATGTGGTAAGGA+AGG + chr8.2:60546380-60546399 MS.gene61077:CDS 40.0%
ACAGGGAAGTAAATGGAGTT+AGG - chr8.2:60542722-60542741 None:intergenic 40.0%
ACTTCACCTACAAACAACTC+TGG + chr8.2:60542621-60542640 MS.gene61077:CDS 40.0%
AGAGTTGTTTGTAGGTGAAG+TGG - chr8.2:60542622-60542641 None:intergenic 40.0%
AGCAGAATCAATCCAACAAG+TGG + chr8.2:60542455-60542474 MS.gene61077:CDS 40.0%
ATCATCATCAAACACACTGG+AGG + chr8.2:60542937-60542956 MS.gene61077:CDS 40.0%
ATCCAATGGCATATGTGGTA+AGG + chr8.2:60546376-60546395 MS.gene61077:CDS 40.0%
ATGAAGCACGAATACAGACA+TGG - chr8.2:60543975-60543994 None:intergenic 40.0%
ATTATTCTCATGGAAGCCGA+TGG + chr8.2:60542905-60542924 MS.gene61077:CDS 40.0%
ATTTCACGTACTGTGTTGAG+GGG - chr8.2:60542794-60542813 None:intergenic 40.0%
CACCGCATAACACCATATTT+AGG - chr8.2:60543417-60543436 None:intergenic 40.0%
CACTGTGTTCTTAGTTGGTT+GGG - chr8.2:60545386-60545405 None:intergenic 40.0%
CAGTTTGAACCATTGCTATG+AGG - chr8.2:60543129-60543148 None:intergenic 40.0%
CATCTGGTAAAATTCTTCGG+AGG + chr8.2:60546658-60546677 MS.gene61077:CDS 40.0%
CATGCTCTCCAATATCATGA+AGG + chr8.2:60545344-60545363 MS.gene61077:intron 40.0%
CATGTCATGCATTTCGAACT+TGG - chr8.2:60543284-60543303 None:intergenic 40.0%
CCTAATGTTGCCATTCTTCA+AGG + chr8.2:60543484-60543503 MS.gene61077:CDS 40.0%
CCTTGAAGAATGGCAACATT+AGG - chr8.2:60543487-60543506 None:intergenic 40.0%
CTCCAACATGGGAATCAAAA+AGG + chr8.2:60542673-60542692 MS.gene61077:CDS 40.0%
CTTCATGATATTGGAGAGCA+TGG - chr8.2:60545346-60545365 None:intergenic 40.0%
GAAGATACTACTCCTTTGCT+AGG - chr8.2:60543097-60543116 None:intergenic 40.0%
GAATTACACCATCATCTCCA+TGG - chr8.2:60545828-60545847 None:intergenic 40.0%
GACAAACCTTTCATGATGGT+AGG - chr8.2:60543682-60543701 None:intergenic 40.0%
GACATCATCATCAAACACAC+TGG + chr8.2:60542934-60542953 MS.gene61077:CDS 40.0%
GAGACCATAACCTTGAAGAA+TGG - chr8.2:60543497-60543516 None:intergenic 40.0%
GAGGACATGATGAAGAAAGA+AGG + chr8.2:60542956-60542975 MS.gene61077:CDS 40.0%
GATTTCACGTACTGTGTTGA+GGG - chr8.2:60542795-60542814 None:intergenic 40.0%
GCAGAATCAATCCAACAAGT+GGG + chr8.2:60542456-60542475 MS.gene61077:CDS 40.0%
GTATAGCTATCCAGATAAGG+AGG + chr8.2:60546344-60546363 MS.gene61077:intron 40.0%
GTCAATCCTATGATGACATG+TGG + chr8.2:60542978-60542997 MS.gene61077:CDS 40.0%
GTTGAGCATAGCAACCAATA+TGG - chr8.2:60543356-60543375 None:intergenic 40.0%
GTTGCCATTCTTCAAGGTTA+TGG + chr8.2:60543490-60543509 MS.gene61077:CDS 40.0%
TAAATCAACCCTTACTGCAG+AGG + chr8.2:60544742-60544761 MS.gene61077:CDS 40.0%
TAACTCCATTTACTTCCCTG+TGG + chr8.2:60542721-60542740 MS.gene61077:CDS 40.0%
TAGTTGGTTGGGAATCTCAA+CGG - chr8.2:60545375-60545394 None:intergenic 40.0%
TATGGTCTCACAGAATCCTT+TGG + chr8.2:60543508-60543527 MS.gene61077:CDS 40.0%
TCAGCAAAGAGGTTACAGAA+GGG + chr8.2:60543446-60543465 MS.gene61077:CDS 40.0%
TCCATACCCAAAAATCCATC+TGG + chr8.2:60546642-60546661 MS.gene61077:CDS 40.0%
TCGGCTTCCATGAGAATAAT+TGG - chr8.2:60542905-60542924 None:intergenic 40.0%
TGAAATCGCAAAACAGATCG+CGG + chr8.2:60542808-60542827 MS.gene61077:CDS 40.0%
TGTGAATTGGGTCAGATCTA+TGG + chr8.2:60544021-60544040 MS.gene61077:intron 40.0%
TTATTCTCATGGAAGCCGAT+GGG + chr8.2:60542906-60542925 MS.gene61077:CDS 40.0%
TTCCTTACCACATATGCCAT+TGG - chr8.2:60546381-60546400 None:intergenic 40.0%
TTTGGCACTGTGTTCTTAGT+TGG - chr8.2:60545391-60545410 None:intergenic 40.0%
TTTGGTCCACATGTCATCAT+AGG - chr8.2:60542987-60543006 None:intergenic 40.0%
! ACTCATCCTGCAATTTTGGA+TGG + chr8.2:60545601-60545620 MS.gene61077:CDS 40.0%
! ACTCTACTCATCTGGAACAA+CGG + chr8.2:60543069-60543088 MS.gene61077:CDS 40.0%
! CTCCGAAGAATTTTACCAGA+TGG - chr8.2:60546660-60546679 None:intergenic 40.0%
! GCTAACTCATCCTGCAATTT+TGG + chr8.2:60545597-60545616 MS.gene61077:CDS 40.0%
! GGAGAGCATGGTTTGTAATT+CGG - chr8.2:60545334-60545353 None:intergenic 40.0%
! GTGATCATATGTGTTGGTGT+TGG - chr8.2:60543901-60543920 None:intergenic 40.0%
! TCGGAGGTTTTCATGAGTTT+AGG - chr8.2:60545315-60545334 None:intergenic 40.0%
!! AAATATGGTGTTATGCGGTG+GGG + chr8.2:60543417-60543436 MS.gene61077:CDS 40.0%
!! ACCCTTTTTGATTCCCATGT+TGG - chr8.2:60542678-60542697 None:intergenic 40.0%
!! CTAAATATGGTGTTATGCGG+TGG + chr8.2:60543415-60543434 MS.gene61077:CDS 40.0%
!! TGCCTTGATTTTGGAAACGA+GGG - chr8.2:60542867-60542886 None:intergenic 40.0%
!!! ACCAGATGGATTTTTGGGTA+TGG - chr8.2:60546646-60546665 None:intergenic 40.0%
!!! GATGGATTTTTGGGTATGGA+AGG - chr8.2:60546642-60546661 None:intergenic 40.0%
!!! TCTCTCATTGGTCTTTTGTC+CGG - chr8.2:60543019-60543038 None:intergenic 40.0%
AACAATGATAGCCTCAGTGG+AGG - chr8.2:60543599-60543618 None:intergenic 45.0%
ACACACCACAGGGAAGTAAA+TGG - chr8.2:60542729-60542748 None:intergenic 45.0%
ACAGCACCATCCAAAATTGC+AGG - chr8.2:60545610-60545629 None:intergenic 45.0%
AGCATAGCAACCAATATGGG+CGG - chr8.2:60543352-60543371 None:intergenic 45.0%
AGGCAGACTAGAAACAATGC+CGG + chr8.2:60545034-60545053 MS.gene61077:intron 45.0%
CGATTTCACGTACTGTGTTG+AGG - chr8.2:60542796-60542815 None:intergenic 45.0%
CGGTTCAGCCTTCATGATAT+TGG - chr8.2:60545355-60545374 None:intergenic 45.0%
CTCAGCAAAGAGGTTACAGA+AGG + chr8.2:60543445-60543464 MS.gene61077:CDS 45.0%
GACAAGTGAGAGACAAGTCT+TGG + chr8.2:60544045-60544064 MS.gene61077:intron 45.0%
GACATGTGGACCAAAAGTTC+TGG + chr8.2:60542992-60543011 MS.gene61077:CDS 45.0%
GAGCTACAAAACCCACTTGT+TGG - chr8.2:60542470-60542489 None:intergenic 45.0%
GAGTTTAGAAGTAGCGAGCT+TGG - chr8.2:60546691-60546710 None:intergenic 45.0%
GCACTGTGTTCTTAGTTGGT+TGG - chr8.2:60545387-60545406 None:intergenic 45.0%
GCAGTATCCAATGGCATATG+TGG + chr8.2:60546371-60546390 MS.gene61077:CDS 45.0%
GCATATGTGGTAAGGAAGGA+TGG + chr8.2:60546384-60546403 MS.gene61077:CDS 45.0%
GCTACTCTACTCTACTCATC+TGG + chr8.2:60543061-60543080 MS.gene61077:CDS 45.0%
GTAGAGTAGCTGTGTCTTCT+TGG - chr8.2:60543051-60543070 None:intergenic 45.0%
GTCAACAATGATAGCCTCAG+TGG - chr8.2:60543602-60543621 None:intergenic 45.0%
GTCTTAAAGTGTGATCTGGC+TGG - chr8.2:60545272-60545291 None:intergenic 45.0%
GTGGCATCTAAGGACTGATT+TGG - chr8.2:60542536-60542555 None:intergenic 45.0%
GTTGTTTGTAGGTGAAGTGG+TGG - chr8.2:60542619-60542638 None:intergenic 45.0%
TACAGACATGGACACTGACA+AGG - chr8.2:60543963-60543982 None:intergenic 45.0%
TCCCCTCGTTTCCAAAATCA+AGG + chr8.2:60542862-60542881 MS.gene61077:CDS 45.0%
TCTGTAACCTCTTTGCTGAG+AGG - chr8.2:60543445-60543464 None:intergenic 45.0%
! AACAAAGCCTCTAGTTCAGC+TGG - chr8.2:60545577-60545596 None:intergenic 45.0%
! CTCTACTCATCTGGAACAAC+GGG + chr8.2:60543070-60543089 MS.gene61077:CDS 45.0%
! CTTTTGCACCATGGAGATGA+TGG + chr8.2:60545817-60545836 MS.gene61077:intron 45.0%
! GAGCATGGTTTGTAATTCGG+AGG - chr8.2:60545331-60545350 None:intergenic 45.0%
! GATAAAGGTGGTGGCATCTA+AGG - chr8.2:60542546-60542565 None:intergenic 45.0%
! TCTACTCATCTGGAACAACG+GGG + chr8.2:60543071-60543090 MS.gene61077:CDS 45.0%
! TGATGATGTCGAGTTCCCAT+CGG - chr8.2:60542924-60542943 None:intergenic 45.0%
! TGATTTGGAGGAAGTAGGAG+GGG - chr8.2:60542521-60542540 None:intergenic 45.0%
! TTTGTCCGGTCCAGAACTTT+TGG - chr8.2:60543005-60543024 None:intergenic 45.0%
!! ACTGATTTGGAGGAAGTAGG+AGG - chr8.2:60542523-60542542 None:intergenic 45.0%
!! AGGACTGATTTGGAGGAAGT+AGG - chr8.2:60542526-60542545 None:intergenic 45.0%
!! CTGATTTGGAGGAAGTAGGA+GGG - chr8.2:60542522-60542541 None:intergenic 45.0%
!! CTGCCTTGATTTTGGAAACG+AGG - chr8.2:60542868-60542887 None:intergenic 45.0%
!! GAGAGATGAAAGCACTCTTG+TGG + chr8.2:60545994-60546013 MS.gene61077:intron 45.0%
!! GCAGCCCAGGTTTGTTAATT+TGG + chr8.2:60546444-60546463 MS.gene61077:intron 45.0%
!! GCATCTAAGGACTGATTTGG+AGG - chr8.2:60542533-60542552 None:intergenic 45.0%
!! GCCTTGATTTTGGAAACGAG+GGG - chr8.2:60542866-60542885 None:intergenic 45.0%
!! GTCAAAGATATGGTGATGGC+AGG + chr8.2:60544695-60544714 MS.gene61077:intron 45.0%
!! TATGGAATTTGTTGCAGCCC+AGG + chr8.2:60546431-60546450 MS.gene61077:CDS 45.0%
!! TCACAGAATCCTTTGGAGCT+GGG + chr8.2:60543515-60543534 MS.gene61077:CDS 45.0%
!! TGATTTTGGAAACGAGGGGA+CGG - chr8.2:60542862-60542881 None:intergenic 45.0%
!! TGCAACTCACTTTTGCACCA+TGG + chr8.2:60545808-60545827 MS.gene61077:intron 45.0%
!! TGGTTGACTTGCTCTCTCAT+TGG - chr8.2:60543031-60543050 None:intergenic 45.0%
!! TGTCTCAGTGTCATTTCCCT+CGG + chr8.2:60542746-60542765 MS.gene61077:CDS 45.0%
AAGCACAAGGCGTGCCTAAA+AGG + chr8.2:60544989-60545008 MS.gene61077:intron 50.0%
ACCAATATGGGCGGTACAAG+CGG - chr8.2:60543343-60543362 None:intergenic 50.0%
ACCTCCTCTCTCTCCAACAT+GGG + chr8.2:60542662-60542681 MS.gene61077:CDS 50.0%
ACGGTCTAGCAATGTTCGCT+GGG + chr8.2:60543224-60543243 MS.gene61077:CDS 50.0%
ACGTACTGTGTTGAGGGGAT+TGG - chr8.2:60542789-60542808 None:intergenic 50.0%
AGCTATCCAGATAAGGAGGC+TGG + chr8.2:60546348-60546367 MS.gene61077:intron 50.0%
AGGGGTCCTACCATCATGAA+AGG + chr8.2:60543673-60543692 MS.gene61077:CDS 50.0%
ATGACACTGAGACACACCAC+AGG - chr8.2:60542740-60542759 None:intergenic 50.0%
GAACTTGGAGAGAACGACGA+TGG - chr8.2:60543269-60543288 None:intergenic 50.0%
GATTCCCATGTTGGAGAGAG+AGG - chr8.2:60542669-60542688 None:intergenic 50.0%
GCTATCCAGATAAGGAGGCT+GGG + chr8.2:60546349-60546368 MS.gene61077:intron 50.0%
GGCTGTCCAGAGTTGTTTGT+AGG - chr8.2:60542630-60542649 None:intergenic 50.0%
TACGGTCTAGCAATGTTCGC+TGG + chr8.2:60543223-60543242 MS.gene61077:CDS 50.0%
TACTGTGTTGAGGGGATTGG+TGG - chr8.2:60542786-60542805 None:intergenic 50.0%
TAGCCAACCCTCTGCAGTAA+GGG - chr8.2:60544753-60544772 None:intergenic 50.0%
TGACACTGAGACACACCACA+GGG - chr8.2:60542739-60542758 None:intergenic 50.0%
TGAGAGTCGTAAGTACGGCA+CGG + chr8.2:60543558-60543577 MS.gene61077:CDS 50.0%
TGGAGTTAGGAGAGAGAAGG+AGG - chr8.2:60542709-60542728 None:intergenic 50.0%
TGTAAAGGCGAGGACAGGTT+TGG - chr8.2:60542837-60542856 None:intergenic 50.0%
TTAACCAGACCGGTGAGCTT+TGG + chr8.2:60543647-60543666 MS.gene61077:CDS 50.0%
TTAGCCAACCCTCTGCAGTA+AGG - chr8.2:60544754-60544773 None:intergenic 50.0%
TTCGCTGGGCTTCTCTCTTT+AGG + chr8.2:60543238-60543257 MS.gene61077:CDS 50.0%
TTTGTAGGTGAAGTGGTGGC+CGG - chr8.2:60542615-60542634 None:intergenic 50.0%
! AAAGCCTCTAGTTCAGCTGG+AGG - chr8.2:60545574-60545593 None:intergenic 50.0%
! AAGCCTCTAGTTCAGCTGGA+GGG - chr8.2:60545573-60545592 None:intergenic 50.0%
! AGGCGATGCTGCCTTGATTT+TGG - chr8.2:60542876-60542895 None:intergenic 50.0%
! GCTTTTGTCTTCCTCCACTG+AGG + chr8.2:60543585-60543604 MS.gene61077:CDS 50.0%
! TGATCTGGCTGGCCGATATT+TGG - chr8.2:60545261-60545280 None:intergenic 50.0%
!! AGAGGGTTGGCTAAGAACTG+GGG + chr8.2:60544760-60544779 MS.gene61077:CDS 50.0%
!! CACAGAATCCTTTGGAGCTG+GGG + chr8.2:60543516-60543535 MS.gene61077:CDS 50.0%
!! CAGAGGGTTGGCTAAGAACT+GGG + chr8.2:60544759-60544778 MS.gene61077:CDS 50.0%
!! CTCACAGAATCCTTTGGAGC+TGG + chr8.2:60543514-60543533 MS.gene61077:CDS 50.0%
!! GATTTTGGAAACGAGGGGAC+GGG - chr8.2:60542861-60542880 None:intergenic 50.0%
!! GTGGACCAAAAGTTCTGGAC+CGG + chr8.2:60542997-60543016 MS.gene61077:CDS 50.0%
ACCGCTTGTACCGCCCATAT+TGG + chr8.2:60543339-60543358 MS.gene61077:CDS 55.0%
AGCTCACCGGTCTGGTTAAC+TGG - chr8.2:60543646-60543665 None:intergenic 55.0%
AGTTGAAGCCCCAGCTCCAA+AGG - chr8.2:60543527-60543546 None:intergenic 55.0%
ATATGGGCGGTACAAGCGGT+AGG - chr8.2:60543339-60543358 None:intergenic 55.0%
CAACCCTTACTGCAGAGGGT+TGG + chr8.2:60544747-60544766 MS.gene61077:CDS 55.0%
CACCTCCTCTCTCTCCAACA+TGG + chr8.2:60542661-60542680 MS.gene61077:CDS 55.0%
CTGCTCCCAGTTAACCAGAC+CGG + chr8.2:60543637-60543656 MS.gene61077:CDS 55.0%
GAAAGCAGTGTGGCCGTGAT+GGG - chr8.2:60542579-60542598 None:intergenic 55.0%
GCTCACCGGTCTGGTTAACT+GGG - chr8.2:60543645-60543664 None:intergenic 55.0%
TACTGCCCAGCCTCCTTATC+TGG - chr8.2:60546357-60546376 None:intergenic 55.0%
TCCCATGTTGGAGAGAGAGG+AGG - chr8.2:60542666-60542685 None:intergenic 55.0%
TGAAAGCAGTGTGGCCGTGA+TGG - chr8.2:60542580-60542599 None:intergenic 55.0%
! TGTGTTGAGGGGATTGGTGG+TGG - chr8.2:60542783-60542802 None:intergenic 55.0%
!! AACGAGGGGACGGGTTGTAA+AGG - chr8.2:60542852-60542871 None:intergenic 55.0%
!! AGGCGTCGATGAAAGCAGTG+TGG - chr8.2:60542589-60542608 None:intergenic 55.0%
!! GCAGAGGGTTGGCTAAGAAC+TGG + chr8.2:60544758-60544777 MS.gene61077:CDS 55.0%
!! GGGATTGGTGGTGGTGATGA+TGG - chr8.2:60542774-60542793 None:intergenic 55.0%
ACCCCTGAGCCAAAGCTCAC+CGG - chr8.2:60543659-60543678 None:intergenic 60.0%
AGTCGTAAGTACGGCACGGC+GGG + chr8.2:60543562-60543581 MS.gene61077:CDS 60.0%
ATGGGCGCGGGAGGAGATAA+AGG - chr8.2:60542561-60542580 None:intergenic 60.0%
CGGGTTGTAAAGGCGAGGAC+AGG - chr8.2:60542842-60542861 None:intergenic 60.0%
GAGTCGTAAGTACGGCACGG+CGG + chr8.2:60543561-60543580 MS.gene61077:CDS 60.0%
GCGGGAGGAGATAAAGGTGG+TGG - chr8.2:60542555-60542574 None:intergenic 60.0%
GCTTTCATCGACGCCTCCAC+CGG + chr8.2:60542593-60542612 MS.gene61077:CDS 60.0%
GGAACAACGGGGCCTAGCAA+AGG + chr8.2:60543082-60543101 MS.gene61077:CDS 60.0%
GGAGGCTGGGCAGTATCCAA+TGG + chr8.2:60546362-60546381 MS.gene61077:CDS 60.0%
GGTCCCTCCAGCTGAACTAG+AGG + chr8.2:60545567-60545586 MS.gene61077:intron 60.0%
TGAGCCAAAGCTCACCGGTC+TGG - chr8.2:60543654-60543673 None:intergenic 60.0%
TGGGGCTCCTCTCAGCAAAG+AGG + chr8.2:60543435-60543454 MS.gene61077:CDS 60.0%
! ACCGGTGAGCTTTGGCTCAG+GGG + chr8.2:60543655-60543674 MS.gene61077:CDS 60.0%
! AGACCGGTGAGCTTTGGCTC+AGG + chr8.2:60543653-60543672 MS.gene61077:CDS 60.0%
! AGAGGAGGTGACAGCGTCGA+CGG - chr8.2:60542651-60542670 None:intergenic 60.0%
! GACCGGTGAGCTTTGGCTCA+GGG + chr8.2:60543654-60543673 MS.gene61077:CDS 60.0%
ATCTCCTCCCGCGCCCATCA+CGG + chr8.2:60542563-60542582 MS.gene61077:CDS 65.0%
GGCGCGGGAGGAGATAAAGG+TGG - chr8.2:60542558-60542577 None:intergenic 65.0%
GTAGGTGAAGTGGTGGCCGG+TGG - chr8.2:60542612-60542631 None:intergenic 65.0%
GTCGTAAGTACGGCACGGCG+GGG + chr8.2:60543563-60543582 MS.gene61077:CDS 65.0%
!! GGGGACGGGTTGTAAAGGCG+AGG - chr8.2:60542847-60542866 None:intergenic 65.0%
!! GGTGGTGATGATGGCGCCGA+GGG - chr8.2:60542765-60542784 None:intergenic 65.0%
!! TGGTGGTGATGATGGCGCCG+AGG - chr8.2:60542766-60542785 None:intergenic 65.0%
GGTGAAGTGGTGGCCGGTGG+AGG - chr8.2:60542609-60542628 None:intergenic 70.0%
!! AGTGTGGCCGTGATGGGCGC+GGG - chr8.2:60542573-60542592 None:intergenic 70.0%
!! CAGTGTGGCCGTGATGGGCG+CGG - chr8.2:60542574-60542593 None:intergenic 70.0%
!!! GTGGCCGTGATGGGCGCGGG+AGG - chr8.2:60542570-60542589 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 60542431 60546713 60542431 ID=MS.gene61077
chr8.2 mRNA 60542431 60546713 60542431 ID=MS.gene61077.t1;Parent=MS.gene61077
chr8.2 exon 60542431 60543694 60542431 ID=MS.gene61077.t1.exon1;Parent=MS.gene61077.t1
chr8.2 CDS 60542431 60543694 60542431 ID=cds.MS.gene61077.t1;Parent=MS.gene61077.t1
chr8.2 exon 60544717 60544862 60544717 ID=MS.gene61077.t1.exon2;Parent=MS.gene61077.t1
chr8.2 CDS 60544717 60544862 60544717 ID=cds.MS.gene61077.t1;Parent=MS.gene61077.t1
chr8.2 exon 60545568 60545635 60545568 ID=MS.gene61077.t1.exon3;Parent=MS.gene61077.t1
chr8.2 CDS 60545568 60545635 60545568 ID=cds.MS.gene61077.t1;Parent=MS.gene61077.t1
chr8.2 exon 60546350 60546452 60546350 ID=MS.gene61077.t1.exon4;Parent=MS.gene61077.t1
chr8.2 CDS 60546350 60546452 60546350 ID=cds.MS.gene61077.t1;Parent=MS.gene61077.t1
chr8.2 exon 60546600 60546713 60546600 ID=MS.gene61077.t1.exon5;Parent=MS.gene61077.t1
chr8.2 CDS 60546600 60546713 60546600 ID=cds.MS.gene61077.t1;Parent=MS.gene61077.t1
Gene Sequence

>MS.gene61077

ATGGAGCACGATGGGAATAGGAATAGCAGAATCAATCCAACAAGTGGGTTTTGTAGCTCTAATTCAATCTTCTACAGCAAGAGGAAACCCCTCCTACTTCCTCCAAATCAGTCCTTAGATGCCACCACCTTTATCTCCTCCCGCGCCCATCACGGCCACACTGCTTTCATCGACGCCTCCACCGGCCACCACTTCACCTACAAACAACTCTGGACAGCCGTCGACGCTGTCACCTCCTCTCTCTCCAACATGGGAATCAAAAAGGGTGATGTTATCCTCCTTCTCTCTCCTAACTCCATTTACTTCCCTGTGGTGTGTCTCAGTGTCATTTCCCTCGGCGCCATCATCACCACCACCAATCCCCTCAACACAGTACGTGAAATCGCAAAACAGATCGCGGATTCCAAACCTGTCCTCGCCTTTACAACCCGTCCCCTCGTTTCCAAAATCAAGGCAGCATCGCCTACTCTTCCAATTATTCTCATGGAAGCCGATGGGAACTCGACATCATCATCAAACACACTGGAGGACATGATGAAGAAAGAAGGTCAATCCTATGATGACATGTGGACCAAAAGTTCTGGACCGGACAAAAGACCAATGAGAGAGCAAGTCAACCAAGAAGACACAGCTACTCTACTCTACTCATCTGGAACAACGGGGCCTAGCAAAGGAGTAGTATCTTCACATAGAAACCTCATAGCAATGGTTCAAACTGTATCTTCTAGGTTTAATGACGAAGAATATGAGCGGGGACAAACATTCATATGCACAATTCCCATGTTTCACATATACGGTCTAGCAATGTTCGCTGGGCTTCTCTCTTTAGGTTCAACCATCGTCGTTCTCTCCAAGTTCGAAATGCATGACATGCTTTCAGCCATTGAAAAGTTTAAGGTCACGTTCCTACCGCTTGTACCGCCCATATTGGTTGCTATGCTCAACAATGCTGATGCGATTAAGAGCAAATATGACTTGAGTTCCCTAAATATGGTGTTATGCGGTGGGGCTCCTCTCAGCAAAGAGGTTACAGAAGGGTTTGTTGATAAGTACCCTAATGTTGCCATTCTTCAAGGTTATGGTCTCACAGAATCCTTTGGAGCTGGGGCTTCAACTGATTCTTTAGATGAGAGTCGTAAGTACGGCACGGCGGGGCTTTTGTCTTCCTCCACTGAGGCTATCATTGTTGACACTGAAACTGGTAAACTGCTCCCAGTTAACCAGACCGGTGAGCTTTGGCTCAGGGGTCCTACCATCATGAAAGGTTTGTCTTTTTTTGTTTGTTTCATTTTTTCACTATAATTTAGGAGTGTATTGGATTCAAACTTTGATAGACAAGAATAAACGTGGTTTCAAAAGACTTTGATGATCAATATTTTGTAATGTAGATTTCAATTCATTTATATCCTATCAAACACAAACACTATTTGAATTAAGCGTGTTCACGTGTCAGACACGCTTCAATAGCCAACACCAACACATATGATCACGTTGAATTATGTGATTATATCAAATTATTAACGGTGTCGCCTTGTCAGTGTCCATGTCTGTATTCGTGCTTCATAGTTTATATCATAAGATTTCATAGGATGTGAATTGGGTCAGATCTATGGTGACAAGTGAGAGACAAGTCTTGGACCATGCACAAGTTTTTTTTACTATTGGATCAATAAATCTTACCATTGAATCAAATGTGATATGATGTGATTTATTGAATTAAAGGTAGAAAATAAAGTTGTGTATGGTCCAAGACTAATTTAATTGTACATATTAGACAAAGTCTTTGAAATAACTTTACGAATTTATAAGGTTTCAAGTTATTCAATAATTTATACAAATTTTGAAGAGAAATACTTTCTTGTATGGTAACACTAAAGTCCTAAAAAAATGGGACCATAATAATATGAAGTTTGGTCTAGAGTTAAGCTAAGTAAAGTTCCGTAAAAAATTGTTTGATTCAAGAATCAAACTCAGGTTCTCTCGAATGTTTAATCATTAAGTGAAACTTATTAACCACTTGAGTTTAATCATTTAGTTTTTGAAGAGAAATACTAGCAAAACATTGTATAACACTCTTAGTAGTCTCAATACTCTATCTTGTTAAAGAAAATAAAGTAAAAATGTGTTTAAAAGTAACAATTTGAAAAGAAAAAACTCCTAAGTGAATAAAGCTTTAGATAGTTGCTCATATTAGTTAGATATAAGCAAGCTCACTTAATTGTTTATTCTATCTATGCTAATCATGGTTGTTGTTTTTAATTAACGTCAAAGATATGGTGATGGCAGGTTATTTAAATAATGAGGAGGCAACTAAATCAACCCTTACTGCAGAGGGTTGGCTAAGAACTGGGGATCTTTGCTATATTGATAGTGATGGATTCTTATTTGTGGTTGATAGGTTGAAAGAGCTAATTAAATACAAGGGGTATCAGGTTATAATCGGATTCTCATCCTCTTGAATCTATCTTTATAGTTTTTCTATAAACAAGTTTAGTATTTTTTTTTTTTTGAGAGGCCAAAAACACAAAAACGAAATATAGATTAAAAAACTCTCTTTGAAGCACAAGGCGTGCCTAAAAGGAAGTAGAGAGAGTATACATTACAGGCAGACTAGAAACAATGCCGGAAAACAAAAGCAAAATATTGTAAGGGAGTATAACCCATACAAAGAAGATGATTTAGACCACCATGAATTGAAGTCGTAATAAAAGTTAGGAAATTAGAACTTCAACCACCACCAATAATAAAGCTTAATAAGATCTAGTAATTGGTCTAACGATAATTCTTTGTTGCTAAAGATACGAACATTACGCTACTTCTAAATACACCAAATATCGGCCAGCCAGATCACACTTTAAGACAATACTTAATTGATATCCTTCCTAAACTCATGAAAACCTCCGAATTACAAACCATGCTCTCCAATATCATGAAGGCTGAACCGTTGAGATTCCCAACCAACTAAGAACACAGTGCCAAATACTACCAAAGAAATCACAATTGTAGTAATTATTTACAAACTTAACAACTGTTTGTGATTGCAAGTCTATTGGTAGCTACTTGTTGCTTATTCAATTAAGAATATAAATATTGTTAATCTCATGAAATTTTTCTTGATTTTTTTTTTAATGTTACAGGTCCCTCCAGCTGAACTAGAGGCTTTGTTGCTAACTCATCCTGCAATTTTGGATGGTGCTGTCATACCGTAAGTATTTTTGTATAAAAATATGAGGAAAAATAAAATTATTATTTATTAAAGTAGCATTGTTGGTCATTTTATAATTATTTTTCATGGAATTTGAACTCGCTATAAAGTTATACTTAGAAATAAACTTTACAGTGTAAGCCCTTAATTTATACCAAAGATTATATGTTGGTGCAACTCACTTTTGCACCATGGAGATGATGGTGTAATTCATTTTACACGTTCTCCCACATATTGATAGTGCAATTCACTCTTGCACTTACACACATTCACTGTTTGTTACTAGAGTATCAATGAAGAAGAATAATAGAAAATATGAAAGTTGTTTGAGGAAGTTTTAGAGAGAGAGAGAGAGAGAGAGAGATGAAAGCACTCTTGTGGAATAGAATTGATCACTTTACTTGTGATTCTCACTTGTAATTTCACTCATTGCAATTGGTTATGTTTTCCATATACACTGCACTTATAGGTCACAAAGTGCATAGCTGTGTCAACATTCTGCACTCTGACTCTTATTACTTTCACTACAAGTAACCTATTATAATTGGCTAAATTGAATTACAACTCACAACATTATACATGAATTATTTATTTTATTCGAGTAGGTATTCTCTCCATTTTTCAAAAGAAACAAATGCTACATCCCTAGTATTTTGGGTGTATACCATCTTGATTCACAATTAAGTCCTTTGAATGTCTTGTTTCTATGTATAGCTATCCAGATAAGGAGGCTGGGCAGTATCCAATGGCATATGTGGTAAGGAAGGATGGAAGTAACATGTCAGAAAGCCAAGTTATGGAATTTGTTGCAGCCCAGGTTTGTTAATTTGGAACACTTCTCAACAATGCTCATCTTAATAAAGTTATAAAATAATTTTAATCACATTTGCACCTGGATTATGAGTTTAACTTGTTAAATTGGTAAATTACATTACTAATTATTTTTTATGCATGGATTTTACAGGTGGCTCCGTACAAAAGAATTCGAAAAGTTGCATTCATACCTTCCATACCCAAAAATCCATCTGGTAAAATTCTTCGGAGGGATCTCACCAAGCTCGCTACTTCTAAACTCTGA
Protein sequence

>MS.gene61077.t1

MEHDGNRNSRINPTSGFCSSNSIFYSKRKPLLLPPNQSLDATTFISSRAHHGHTAFIDASTGHHFTYKQLWTAVDAVTSSLSNMGIKKGDVILLLSPNSIYFPVVCLSVISLGAIITTTNPLNTVREIAKQIADSKPVLAFTTRPLVSKIKAASPTLPIILMEADGNSTSSSNTLEDMMKKEGQSYDDMWTKSSGPDKRPMREQVNQEDTATLLYSSGTTGPSKGVVSSHRNLIAMVQTVSSRFNDEEYERGQTFICTIPMFHIYGLAMFAGLLSLGSTIVVLSKFEMHDMLSAIEKFKVTFLPLVPPILVAMLNNADAIKSKYDLSSLNMVLCGGAPLSKEVTEGFVDKYPNVAILQGYGLTESFGAGASTDSLDESRKYGTAGLLSSSTEAIIVDTETGKLLPVNQTGELWLRGPTIMKGYLNNEEATKSTLTAEGWLRTGDLCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDGAVIPYPDKEAGQYPMAYVVRKDGSNMSESQVMEFVAAQVAPYKRIRKVAFIPSIPKNPSGKILRRDLTKLATSKL