AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21861

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21861.t1 MTR_5g007640 95.060 587 14 2 1 572 1 587 0.0 1131
MS.gene21861.t1 MTR_2g105570 67.412 537 164 5 40 568 12 545 0.0 738
MS.gene21861.t1 MTR_4g005750 64.607 534 178 4 40 568 11 538 0.0 692
MS.gene21861.t1 MTR_4g128337 62.030 532 195 4 40 568 17 544 0.0 677
MS.gene21861.t1 MTR_4g057730 43.066 548 279 8 40 571 11 541 2.22e-141 420
MS.gene21861.t1 MTR_2g095510 42.329 541 288 6 40 570 11 537 9.40e-136 405
MS.gene21861.t1 MTR_3g460770 36.727 550 325 8 25 568 5 537 2.68e-128 387
MS.gene21861.t1 MTR_1g063120 41.481 540 278 12 47 564 21 544 1.47e-124 377
MS.gene21861.t1 MTR_1g063110 39.741 541 282 11 47 564 21 540 6.15e-117 358
MS.gene21861.t1 MTR_4g057730 42.050 478 244 8 40 501 11 471 2.54e-115 351
MS.gene21861.t1 MTR_1g026310 37.989 537 317 6 37 564 23 552 2.42e-113 349
MS.gene21861.t1 MTR_5g027480 40.039 507 285 8 72 570 58 553 3.25e-105 328
MS.gene21861.t1 MTR_3g088870 38.600 500 284 8 72 564 67 550 4.16e-104 325
MS.gene21861.t1 MTR_4g057730 40.351 456 239 8 40 479 11 449 4.10e-103 319
MS.gene21861.t1 MTR_8g039720 37.232 513 286 9 72 564 55 551 4.72e-103 322
MS.gene21861.t1 MTR_1g090737 38.447 528 301 8 47 564 45 558 6.73e-101 317
MS.gene21861.t1 MTR_4g077900 40.123 486 272 8 94 570 1 476 3.51e-100 312
MS.gene21861.t1 MTR_5g027500 39.558 498 272 9 92 570 79 566 2.58e-99 313
MS.gene21861.t1 MTR_3g088880 36.056 502 291 8 72 564 68 548 1.95e-98 310
MS.gene21861.t1 MTR_2g095510 39.111 450 250 6 40 479 11 446 1.68e-96 302
MS.gene21861.t1 MTR_1g073180 36.207 522 297 11 58 568 34 530 3.93e-91 290
MS.gene21861.t1 MTR_1g073180 34.930 501 290 11 58 547 56 531 5.59e-80 261
MS.gene21861.t1 MTR_1569s0010 28.350 515 330 11 83 566 23 529 6.01e-52 186
MS.gene21861.t1 MTR_3g035130 29.537 518 315 18 66 562 17 505 7.29e-48 175
MS.gene21861.t1 MTR_3g064420 28.388 546 341 16 58 567 18 549 1.74e-44 166
MS.gene21861.t1 MTR_1g026470 30.829 386 251 6 40 416 26 404 2.23e-44 162
MS.gene21861.t1 MTR_0803s0020 26.899 487 337 9 80 558 259 734 2.04e-42 164
MS.gene21861.t1 MTR_1g026430 30.366 382 250 6 40 412 26 400 2.35e-42 157
MS.gene21861.t1 MTR_5g076220 29.344 518 319 18 81 565 39 542 5.14e-42 159
MS.gene21861.t1 MTR_5g008820 27.839 546 350 18 51 570 9 536 2.82e-41 157
MS.gene21861.t1 MTR_3g035130 29.299 471 285 16 66 516 17 459 1.74e-40 153
MS.gene21861.t1 MTR_5g076200 28.101 516 328 19 81 565 39 542 1.37e-37 147
MS.gene21861.t1 MTR_5g008800 27.223 551 349 17 51 570 9 538 1.44e-37 146
MS.gene21861.t1 MTR_5g076240 26.642 548 354 20 51 565 9 541 3.26e-37 145
MS.gene21861.t1 MTR_5g023730 26.571 557 345 21 52 570 12 542 1.32e-36 144
MS.gene21861.t1 MTR_8g074040 26.168 535 339 16 69 570 71 582 2.03e-36 144
MS.gene21861.t1 MTR_0161s0050 27.186 526 322 19 81 565 39 544 3.46e-36 142
MS.gene21861.t1 MTR_2g030240 25.627 558 349 19 60 570 7 545 8.39e-32 130
MS.gene21861.t1 MTR_2g044180 27.580 533 315 23 82 567 46 554 9.00e-32 130
MS.gene21861.t1 MTR_4g121600 25.960 547 310 18 80 567 44 554 1.05e-31 129
MS.gene21861.t1 MTR_4g011790 24.723 542 345 15 66 565 72 592 5.26e-31 127
MS.gene21861.t1 MTR_4g013210 26.721 494 292 20 66 516 66 532 9.57e-31 127
MS.gene21861.t1 MTR_7g084850 24.906 530 339 16 81 565 202 717 2.53e-30 126
MS.gene21861.t1 MTR_4g011790 24.818 548 349 15 66 571 72 598 6.88e-30 124
MS.gene21861.t1 MTR_4g011790 24.501 551 344 16 66 565 72 601 9.08e-29 121
MS.gene21861.t1 MTR_4g013210 27.387 398 235 14 209 570 65 444 1.24e-28 119
MS.gene21861.t1 MTR_8g074120 29.771 393 229 15 201 570 125 493 1.10e-27 117
MS.gene21861.t1 MTR_8g074040 25.625 480 303 15 124 570 6 464 1.37e-26 113
MS.gene21861.t1 MTR_2g044180 30.208 384 221 16 212 567 99 463 3.00e-26 112
MS.gene21861.t1 MTR_1g104810 25.046 543 298 19 31 489 51 568 1.01e-25 112
MS.gene21861.t1 MTR_1g104810 29.379 354 184 13 196 499 174 511 1.82e-25 111
MS.gene21861.t1 MTR_2g030240 26.076 395 242 11 212 570 71 451 2.41e-25 109
MS.gene21861.t1 MTR_5g009350 27.033 492 268 17 80 499 77 549 4.93e-25 110
MS.gene21861.t1 MTR_5g009350 27.105 487 264 17 80 494 77 544 5.25e-25 109
MS.gene21861.t1 MTR_5g009350 26.978 493 269 17 80 500 77 550 5.25e-25 109
MS.gene21861.t1 MTR_5g009350 27.033 492 268 17 80 499 77 549 5.68e-25 109
MS.gene21861.t1 MTR_5g009360 27.236 492 267 17 80 499 77 549 1.74e-24 108
MS.gene21861.t1 MTR_1g086600 26.680 506 273 20 83 505 100 590 9.60e-24 106
MS.gene21861.t1 MTR_7g109830 27.216 485 270 20 83 499 78 547 1.04e-23 105
MS.gene21861.t1 MTR_5g009360 30.495 364 176 15 194 499 79 423 3.06e-23 103
MS.gene21861.t1 MTR_4g013210 24.176 546 317 21 66 570 66 555 4.50e-23 103
MS.gene21861.t1 MTR_1g034360 25.767 489 271 18 83 499 80 548 2.83e-22 101
MS.gene21861.t1 MTR_4g057755 51.948 77 37 0 424 500 42 118 5.41e-22 92.0
MS.gene21861.t1 MTR_4g068670 24.694 490 288 17 76 499 72 546 6.61e-22 100
MS.gene21861.t1 MTR_4g013210 26.536 407 234 17 66 432 66 447 7.26e-19 90.1
MS.gene21861.t1 MTR_3g084470 33.831 201 100 6 361 536 471 663 1.35e-18 90.1
MS.gene21861.t1 MTR_4g013210 24.485 388 218 14 209 570 65 403 9.78e-18 85.9
MS.gene21861.t1 MTR_3g082660 24.286 490 273 20 83 490 138 611 1.86e-17 86.7
MS.gene21861.t1 MTR_3g084450 31.156 199 109 4 361 536 267 460 3.91e-17 85.1
MS.gene21861.t1 MTR_3g084450 31.156 199 109 4 361 536 475 668 6.98e-17 84.7
MS.gene21861.t1 MTR_8g083170 34.783 161 89 4 363 512 480 635 1.25e-16 84.0
MS.gene21861.t1 MTR_1054s0020 21.643 499 346 14 22 504 232 701 1.90e-15 80.1
MS.gene21861.t1 MTR_3g088890 52.381 63 30 0 474 536 10 72 2.97e-15 71.6
MS.gene21861.t1 MTR_1586s0010 26.994 326 214 11 67 378 53 368 8.13e-15 77.0
MS.gene21861.t1 MTR_1g026350 34.146 123 81 0 37 159 23 145 1.79e-13 69.3
MS.gene21861.t1 MTR_1g030290 33.143 175 91 8 334 494 421 583 3.59e-13 72.8
MS.gene21861.t1 MTR_4g066130 24.561 399 249 13 209 561 646 1038 8.82e-13 72.0
MS.gene21861.t1 MTR_3g087980 32.353 170 99 8 334 494 419 581 1.42e-11 67.8
MS.gene21861.t1 MTR_8g035620 23.185 496 319 18 105 559 142 616 3.90e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21861.t1 AT1G65060 73.162 544 136 4 30 568 22 560 0.0 814
MS.gene21861.t1 AT3G21240 64.599 548 182 4 27 568 9 550 0.0 732
MS.gene21861.t1 AT1G51680 63.521 551 186 4 28 568 12 557 0.0 690
MS.gene21861.t1 AT1G65060 71.335 457 121 4 30 481 22 473 0.0 666
MS.gene21861.t1 AT3G21240 65.000 480 156 4 27 500 9 482 0.0 640
MS.gene21861.t1 AT3G21240 65.000 480 156 4 27 500 9 482 0.0 640
MS.gene21861.t1 AT1G51680 62.813 519 178 4 28 536 12 525 0.0 637
MS.gene21861.t1 AT3G21230 56.810 558 226 6 24 570 13 566 0.0 608
MS.gene21861.t1 AT1G51680 63.147 483 163 4 28 500 12 489 0.0 595
MS.gene21861.t1 AT3G21230 55.849 530 219 6 24 542 13 538 0.0 561
MS.gene21861.t1 AT3G21230 56.148 488 199 6 24 500 13 496 0.0 521
MS.gene21861.t1 AT4G05160 43.297 552 272 9 40 570 11 542 3.54e-139 415
MS.gene21861.t1 AT3G21230 52.392 418 184 6 24 430 13 426 3.91e-135 401
MS.gene21861.t1 AT1G20510 38.086 533 308 6 41 564 17 536 1.56e-116 357
MS.gene21861.t1 AT1G62940 38.175 537 318 5 39 570 11 538 5.17e-112 345
MS.gene21861.t1 AT1G20480 34.648 583 348 7 2 571 1 563 2.41e-110 341
MS.gene21861.t1 AT1G20500 36.194 536 324 7 36 564 18 542 3.31e-110 340
MS.gene21861.t1 AT5G63380 38.833 497 284 9 73 564 69 550 1.68e-108 336
MS.gene21861.t1 AT4G19010 37.956 548 317 10 35 571 26 561 5.64e-106 330
MS.gene21861.t1 AT5G38120 34.750 541 314 10 41 564 24 542 7.27e-99 311
MS.gene21861.t1 AT1G20510 35.957 470 279 6 41 501 17 473 1.10e-89 285
MS.gene21861.t1 AT5G38120 33.463 514 303 10 41 537 24 515 7.57e-86 276
MS.gene21861.t1 AT1G20510 34.375 448 272 6 41 479 17 451 2.77e-77 252
MS.gene21861.t1 AT5G38120 32.636 478 283 10 41 501 24 479 1.49e-75 248
MS.gene21861.t1 AT5G38120 32.636 478 283 10 41 501 24 479 1.49e-75 248
MS.gene21861.t1 AT1G20490 31.282 390 238 8 73 448 55 428 1.10e-55 194
MS.gene21861.t1 AT1G20490 31.282 390 238 8 73 448 55 428 1.10e-55 194
MS.gene21861.t1 AT1G21540 29.749 558 336 19 51 570 9 548 4.77e-51 184
MS.gene21861.t1 AT5G16340 30.885 531 303 19 74 565 33 538 1.71e-48 177
MS.gene21861.t1 AT3G48990 30.667 525 311 17 61 562 10 504 3.71e-48 176
MS.gene21861.t1 AT5G16370 30.508 531 305 19 74 565 33 538 2.22e-47 174
MS.gene21861.t1 AT1G77240 27.402 562 339 20 51 570 9 543 2.12e-46 171
MS.gene21861.t1 AT1G21530 27.636 550 347 18 51 565 9 542 2.07e-44 166
MS.gene21861.t1 AT1G65890 27.857 560 340 18 51 565 9 549 1.94e-43 164
MS.gene21861.t1 AT1G21530 27.848 553 340 20 51 565 9 540 3.71e-43 162
MS.gene21861.t1 AT1G75960 27.172 541 357 14 51 565 9 538 3.72e-41 156
MS.gene21861.t1 AT1G65880 27.110 557 349 17 51 565 9 550 7.78e-41 156
MS.gene21861.t1 AT1G66120 26.465 563 337 15 51 565 9 542 7.79e-38 147
MS.gene21861.t1 AT3G16170 24.055 582 368 15 36 570 52 606 6.41e-37 145
MS.gene21861.t1 AT1G20560 25.227 551 364 16 51 570 11 544 3.05e-35 140
MS.gene21861.t1 AT1G30520 26.632 582 335 19 50 570 1 551 3.49e-35 140
MS.gene21861.t1 AT1G30520 26.632 582 335 19 50 570 1 551 3.49e-35 140
MS.gene21861.t1 AT1G76290 25.651 538 362 15 51 565 9 531 4.15e-34 136
MS.gene21861.t1 AT1G68270 27.128 564 311 21 51 566 9 520 4.27e-34 136
MS.gene21861.t1 AT3G16910 25.179 560 368 20 45 567 12 557 5.38e-33 133
MS.gene21861.t1 AT2G17650 25.180 556 328 21 67 567 74 596 9.89e-29 121
MS.gene21861.t1 AT1G30520 27.460 437 241 15 94 484 45 451 9.95e-27 114
MS.gene21861.t1 AT1G30520 27.460 437 241 15 94 484 45 451 9.95e-27 114
MS.gene21861.t1 AT5G27600 25.597 461 276 14 83 487 120 569 2.77e-26 114
MS.gene21861.t1 AT1G64400 27.391 460 250 14 83 474 81 524 1.36e-25 112
MS.gene21861.t1 AT4G23850 28.085 470 234 19 83 474 81 524 1.57e-25 111
MS.gene21861.t1 AT4G11030 26.767 467 244 18 83 474 81 524 7.52e-25 109
MS.gene21861.t1 AT5G36880 23.574 526 347 15 83 565 149 662 8.89e-25 109
MS.gene21861.t1 AT5G36880 23.574 526 347 15 83 565 149 662 8.89e-25 109
MS.gene21861.t1 AT5G36880 23.574 526 347 15 83 565 149 662 8.89e-25 109
MS.gene21861.t1 AT5G36880 23.574 526 347 15 83 565 149 662 8.89e-25 109
MS.gene21861.t1 AT3G05970 30.841 321 166 12 212 487 260 569 9.70e-25 109
MS.gene21861.t1 AT5G36880 23.574 526 347 15 83 565 199 712 9.82e-25 109
MS.gene21861.t1 AT2G47240 25.693 541 299 18 31 499 38 547 1.17e-24 108
MS.gene21861.t1 AT2G47240 25.693 541 299 18 31 499 38 547 1.17e-24 108
MS.gene21861.t1 AT2G47240 25.693 541 299 18 31 499 38 547 1.17e-24 108
MS.gene21861.t1 AT2G47240 26.585 489 268 17 83 499 19 488 3.34e-24 107
MS.gene21861.t1 AT1G20560 26.400 375 246 11 211 570 107 466 9.85e-24 105
MS.gene21861.t1 AT1G49430 26.166 493 266 20 83 499 81 551 2.97e-22 101
MS.gene21861.t1 AT3G23790 22.552 572 316 17 81 536 110 670 2.69e-20 95.5
MS.gene21861.t1 AT5G36880 23.362 458 299 14 83 500 149 594 1.29e-17 87.0
MS.gene21861.t1 AT1G77590 24.547 497 275 20 83 499 108 584 2.81e-17 85.9
MS.gene21861.t1 AT1G77590 27.473 364 174 17 210 499 91 438 4.59e-17 84.7
MS.gene21861.t1 AT4G14070 31.481 162 95 3 360 510 491 647 3.68e-14 76.3

Find 124 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTTTCTGGATGCCTAATT+TGG 0.113190 5.1:-1993529 None:intergenic
TCATAATTACATCGCCTTTC+TGG 0.154790 5.1:-1993542 None:intergenic
CCCAGTACTGTCCATGTCTT+TGG 0.201857 5.1:+1997506 MS.gene21861:CDS
TGGTGTAGAATTTGACTTTA+AGG 0.220793 5.1:+1993752 MS.gene21861:CDS
CCAAGAGAATGACCAGTTTC+AGG 0.223496 5.1:-1997609 None:intergenic
TTCATTGCTGCTTCCATGAT+TGG 0.246905 5.1:+1993600 MS.gene21861:CDS
ATTTAAATATATGAGTAGTT+TGG 0.255838 5.1:-1993338 None:intergenic
GGTGGTTCCGCCGTTGGTTT+TGG 0.268098 5.1:+1994166 MS.gene21861:CDS
TAGAATTCCTCAAGCCGTTT+TGG 0.275615 5.1:+1994295 MS.gene21861:CDS
GGTAGCGCCACCGCGTCTTC+TGG 0.294044 5.1:-1993867 None:intergenic
TCTGTTGTTAAATATAGATT+TGG 0.309547 5.1:-1993984 None:intergenic
ATCTTTCCTGCAGGAGACTT+TGG 0.324085 5.1:-1998665 None:intergenic
GCAGCTGGTTTGTCCAAATT+AGG 0.329485 5.1:+1993516 MS.gene21861:CDS
TTGTCTGGTGCTGCACCGTT+AGG 0.353019 5.1:+1994245 MS.gene21861:CDS
AGCTTTCTAGCTTTGCTCTT+AGG 0.360829 5.1:-1998700 None:intergenic
AAAGGACTTTATAGCTAAAC+AGG 0.362651 5.1:+1998276 MS.gene21861:CDS
TGAAGTTCCTGTTGCCTTTG+TGG 0.364932 5.1:+1998216 MS.gene21861:CDS
TTTAAATATATGAGTAGTTT+GGG 0.366259 5.1:-1993337 None:intergenic
AACCCATTCCCAACAAGTTC+AGG 0.373293 5.1:+1997540 MS.gene21861:CDS
CCAGTACTGTCCATGTCTTT+GGG 0.375039 5.1:+1997507 MS.gene21861:CDS
CCTGTTGTTCCTGAAGAAAA+TGG 0.377277 5.1:-1993888 None:intergenic
ATAGGTTTCGGCGTAGGTAT+AGG 0.384378 5.1:-1993475 None:intergenic
TGTGTTAGAATCACTCCTTT+AGG 0.387631 5.1:-1993915 None:intergenic
TCGACATTGGAGATAGGTTT+CGG 0.392417 5.1:-1993487 None:intergenic
AAAGTTCTTGACCCTGAAAC+TGG 0.398423 5.1:+1997597 MS.gene21861:CDS
TGGTTAGAGATAGGTATATC+TGG 0.398994 5.1:-1993369 None:intergenic
AGTTTGATCTGAGTTCAATA+AGG 0.403154 5.1:+1994216 MS.gene21861:CDS
GCATACCTTTCATGATTTGT+TGG 0.408174 5.1:-1997665 None:intergenic
TCCTCAAAATTATCAAGTTT+AGG 0.419228 5.1:-1993300 None:intergenic
TTGATGCATAAATTTGAGAT+TGG 0.424139 5.1:+1994098 MS.gene21861:CDS
GGCGATGGTGGTTCCGCCGT+TGG 0.429042 5.1:+1994160 MS.gene21861:CDS
GATCTTACCACAAAGGCAAC+AGG 0.431165 5.1:-1998223 None:intergenic
AGATACTTCTGCGGTCTGTT+TGG 0.433087 5.1:-1993262 None:intergenic
ACAGCTGCATCTGCAATAGA+TGG 0.434911 5.1:-1998072 None:intergenic
TTTGAGATTGGGACTTTGCT+TGG 0.442815 5.1:+1994110 MS.gene21861:CDS
CCCAAAGACATGGACAGTAC+TGG 0.456217 5.1:-1997507 None:intergenic
GCCTTTGTGGTAAGATCAAA+TGG 0.457862 5.1:+1998229 MS.gene21861:CDS
TTGTTTGAAGATTTCAGCAC+TGG 0.468140 5.1:-1993655 None:intergenic
CCTGAAACTGGTCATTCTCT+TGG 0.471831 5.1:+1997609 MS.gene21861:CDS
TGTTTAATCGTTGCTGCCAC+CGG 0.474076 5.1:+1993447 MS.gene21861:CDS
ATCGAACGAAGAGGATATTC+CGG 0.474093 5.1:+1993830 MS.gene21861:CDS
CAAGAGAATGACCAGTTTCA+GGG 0.474741 5.1:-1997608 None:intergenic
TGATGCATAAATTTGAGATT+GGG 0.474843 5.1:+1994099 MS.gene21861:CDS
GGTTGCGACCGCGCCAATCA+TGG 0.479681 5.1:-1993613 None:intergenic
AGCCTGAACTTGTTGGGAAT+GGG 0.480663 5.1:-1997542 None:intergenic
TTCCTCAATATCTTTCCTGC+AGG 0.481601 5.1:-1998674 None:intergenic
TGCATGTGTCTTCAGGGGTA+CGG 0.483207 5.1:+1997468 MS.gene21861:intron
AGAAGACCTTCAAGTTCAGC+AGG 0.488280 5.1:-1998039 None:intergenic
ATTTCAGCACTGGTGTAGAA+AGG 0.492985 5.1:-1993645 None:intergenic
GGCGAAGAGTCCGACGGTGG+CGG 0.493316 5.1:+1994193 MS.gene21861:CDS
TGATCTGAGTTCAATAAGGT+TGG 0.493627 5.1:+1994220 MS.gene21861:CDS
CAAACTCCGTCAAAATGATC+AGG 0.496294 5.1:+1993728 MS.gene21861:CDS
CCACATGAGCCTGAACTTGT+TGG 0.497161 5.1:-1997549 None:intergenic
TGTCTGGTGCTGCACCGTTA+GGG 0.502213 5.1:+1994246 MS.gene21861:CDS
TTTCGAAGCAGTAGGTATGA+AGG 0.503478 5.1:-1993398 None:intergenic
GGGTACGGTATGACAGAGGC+AGG 0.503975 5.1:+1997483 MS.gene21861:CDS
CTACTATTGATGAGGACGGT+TGG 0.510738 5.1:+1997833 MS.gene21861:CDS
ACCTTTCTGAATTTGCTGAT+CGG 0.512697 5.1:+1993421 MS.gene21861:CDS
CCAAAGACATGGACAGTACT+GGG 0.515005 5.1:-1997506 None:intergenic
ACCTGTCCCAAAACGGCTTG+AGG 0.515069 5.1:-1994302 None:intergenic
CCACGTATGCAAATTTCACC+AGG 0.518053 5.1:-1997642 None:intergenic
CTCCTGCAGGAAAGATATTG+AGG 0.522472 5.1:+1998672 MS.gene21861:CDS
TCCAAATTAGGCATCCAGAA+AGG 0.523845 5.1:+1993528 MS.gene21861:CDS
TCGAAGCAGTAGGTATGAAG+GGG 0.525990 5.1:-1993396 None:intergenic
GTCTGTTTGGCATCAACAGA+AGG 0.530691 5.1:-1993249 None:intergenic
CGAAGAGGATATTCCGGTAG+TGG 0.532410 5.1:+1993836 MS.gene21861:CDS
GAGCCTGAACTTGTTGGGAA+TGG 0.535251 5.1:-1997543 None:intergenic
TGGTCTTATACAGAAACATA+AGG 0.543491 5.1:+1994130 MS.gene21861:CDS
ACAATTCACCGGTGGTTCGT+CGG 0.543658 5.1:-1993784 None:intergenic
GCCGATCAGCAAATTCAGAA+AGG 0.544730 5.1:-1993422 None:intergenic
ACATAAGGTGACGGTGGCGA+TGG 0.547290 5.1:+1994145 MS.gene21861:CDS
AGCACTGGTGTAGAAAGGAT+TGG 0.547952 5.1:-1993640 None:intergenic
CTTTGCAAAGCCCAAAGACA+TGG 0.552300 5.1:-1997517 None:intergenic
TTCGAAGCAGTAGGTATGAA+GGG 0.552748 5.1:-1993397 None:intergenic
AGAGAAAATATATGAAACAA+TGG 0.554403 5.1:-1994029 None:intergenic
AAAGAACTCATCAAATTCAA+AGG 0.555133 5.1:+1997919 MS.gene21861:CDS
GAGGACGGTTGGCTTCATAC+TGG 0.556487 5.1:+1997844 MS.gene21861:CDS
TCTTCAAGCTCCTTCCCTAA+CGG 0.558632 5.1:-1994260 None:intergenic
TGGCTTCATACTGGTGATGT+TGG 0.560966 5.1:+1997853 MS.gene21861:CDS
GCAATTCCAAAGTCTCCTGC+AGG 0.562121 5.1:+1998659 MS.gene21861:CDS
AACAAGTGTAGCTCAACAAG+TGG 0.563353 5.1:+1993950 MS.gene21861:CDS
CACATGAGCCTGAACTTGTT+GGG 0.567491 5.1:-1997548 None:intergenic
TCTAACTGAAGAGATTGTAA+AGG 0.570690 5.1:+1998258 MS.gene21861:CDS
TTGGAGATAGGTTTCGGCGT+AGG 0.573267 5.1:-1993481 None:intergenic
TCTGGATCGATCTCCACTAC+CGG 0.574630 5.1:-1993849 None:intergenic
CCTGGTGAAATTTGCATACG+TGG 0.575951 5.1:+1997642 MS.gene21861:CDS
GGCGTTGGCGAAGAGTCCGA+CGG 0.576837 5.1:+1994187 MS.gene21861:CDS
TTCGCCAACGCCAAAACCAA+CGG 0.577652 5.1:-1994176 None:intergenic
GGAACAACAGGATTACCTAA+AGG 0.579367 5.1:+1993900 MS.gene21861:CDS
CGTGGCCAACAAATCATGAA+AGG 0.583026 5.1:+1997660 MS.gene21861:CDS
TGGTGCTGCACCGTTAGGGA+AGG 0.583252 5.1:+1994250 MS.gene21861:CDS
GATAACAACCGACGAACCAC+CGG 0.584426 5.1:+1993776 MS.gene21861:CDS
TCCATTTGATCTTACCACAA+AGG 0.589752 5.1:-1998230 None:intergenic
TTATTGTGTGCACTGAGAGC+AGG 0.590257 5.1:+1994062 MS.gene21861:CDS
CCAACAAGTTCAGGCTCATG+TGG 0.595377 5.1:+1997549 MS.gene21861:CDS
TCTCTTGGTTATAATCAACC+TGG 0.596556 5.1:+1997624 MS.gene21861:CDS
AGATCAAACTCCGCCACCGT+CGG 0.601146 5.1:-1994203 None:intergenic
TAAGGTGACGGTGGCGATGG+TGG 0.605765 5.1:+1994148 MS.gene21861:CDS
TATCTTCTAAGACATTTAGG+TGG 0.607830 5.1:-1998723 None:intergenic
AGGCAAAAGGATGTTGCTGC+TGG 0.614853 5.1:+1998193 MS.gene21861:intron
CTCCGTCAAAATGATCAGGT+TGG 0.616685 5.1:+1993732 MS.gene21861:CDS
GTGCACTGAGAGCAGGAAGT+GGG 0.619752 5.1:+1994069 MS.gene21861:CDS
GAAGACCTTCAAGTTCAGCA+GGG 0.630277 5.1:-1998038 None:intergenic
TGTGCACTGAGAGCAGGAAG+TGG 0.634610 5.1:+1994068 MS.gene21861:CDS
TGCTGCTTCCATGATTGGCG+CGG 0.635104 5.1:+1993605 MS.gene21861:CDS
AAAACTACTATTGATGAGGA+CGG 0.637706 5.1:+1997829 MS.gene21861:CDS
AAGACCTTCAAGTTCAGCAG+GGG 0.660253 5.1:-1998037 None:intergenic
CGAAGCAGTAGGTATGAAGG+GGG 0.662301 5.1:-1993395 None:intergenic
GTGGCAGCAACGATTAAACA+AGG 0.664886 5.1:-1993444 None:intergenic
TGCACTGAGAGCAGGAAGTG+GGG 0.671062 5.1:+1994070 MS.gene21861:CDS
AAATCTATATTTAACAACAG+AGG 0.672104 5.1:+1993986 MS.gene21861:CDS
AACAGAAGTAGATACTTCTG+CGG 0.673811 5.1:-1993271 None:intergenic
GATTTCTGAATCGAACGAAG+AGG 0.677363 5.1:+1993821 MS.gene21861:CDS
AGTGTAGCTCAACAAGTGGA+CGG 0.679768 5.1:+1993954 MS.gene21861:CDS
TATACAGAAACATAAGGTGA+CGG 0.680297 5.1:+1994136 MS.gene21861:CDS
GCCAACGCCAAAACCAACGG+CGG 0.680356 5.1:-1994173 None:intergenic
GTTGGCGAAGAGTCCGACGG+TGG 0.684404 5.1:+1994190 MS.gene21861:CDS
GGTGTAGAAAGGATTGGCAG+TGG 0.691502 5.1:-1993634 None:intergenic
AAATGTAAACAATTCACCGG+TGG 0.693365 5.1:-1993792 None:intergenic
AGACCTTCAAGTTCAGCAGG+GGG 0.699169 5.1:-1998036 None:intergenic
TCAGGGGTACGGTATGACAG+AGG 0.704387 5.1:+1997479 MS.gene21861:intron
ACAGAAACATAAGGTGACGG+TGG 0.707593 5.1:+1994139 MS.gene21861:CDS
GATCGATCCAGAAGACGCGG+TGG 0.720243 5.1:+1993860 MS.gene21861:CDS
GGAGATCGATCCAGAAGACG+CGG 0.726053 5.1:+1993857 MS.gene21861:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATAATTAATCTCTAA+TGG + chr5.1:1998154-1998173 MS.gene21861:intron 10.0%
!! AAATCAAAAATAAAAAGAAT+AGG + chr5.1:1997289-1997308 MS.gene21861:intron 10.0%
!! GATTTAATATTTACAATTAT+AGG - chr5.1:1994516-1994535 None:intergenic 10.0%
!! TAAATTAATTAAGATACTTA+CGG - chr5.1:1998102-1998121 None:intergenic 10.0%
!! TAATTATTAATTCAATGATT+TGG - chr5.1:1994454-1994473 None:intergenic 10.0%
!!! AAAAATTAAATTTTATTTCG+TGG - chr5.1:1994556-1994575 None:intergenic 10.0%
!!! AATTATTATTTTGTTATGTT+AGG + chr5.1:1998011-1998030 MS.gene21861:intron 10.0%
!!! ATCAATTTTTTCTTATAAAT+AGG + chr5.1:1995058-1995077 MS.gene21861:intron 10.0%
!!! ATTTTGATAGTAATTTAATA+TGG + chr5.1:1995747-1995766 MS.gene21861:intron 10.0%
!!! TGTATTCTTTTTTTTTTTTT+TGG + chr5.1:1996746-1996765 MS.gene21861:intron 10.0%
!!! TTTTTATTTTTGATTTTCTT+AGG - chr5.1:1997285-1997304 None:intergenic 10.0%
!! AAAAATAAAAAGAATAGGAT+TGG + chr5.1:1997294-1997313 MS.gene21861:intron 15.0%
!! AAAATAAAAAGAATAGGATT+GGG + chr5.1:1997295-1997314 MS.gene21861:intron 15.0%
!! AAATTAATGAAATACATACT+TGG - chr5.1:1997948-1997967 None:intergenic 15.0%
!! AAATTAATTAAGATACTTAC+GGG - chr5.1:1998101-1998120 None:intergenic 15.0%
!! AGAAACTTAAGTTAATAAAA+TGG + chr5.1:1994838-1994857 MS.gene21861:intron 15.0%
!! ATTAAATGTATCTTACAAAT+AGG - chr5.1:1994962-1994981 None:intergenic 15.0%
!! ATTTAAATATATGAGTAGTT+TGG - chr5.1:1993341-1993360 None:intergenic 15.0%
!! CTATAATTACTTATTAATAG+AGG + chr5.1:1995825-1995844 MS.gene21861:intron 15.0%
!! CTCTATTAATAAGTAATTAT+AGG - chr5.1:1995827-1995846 None:intergenic 15.0%
!! GAAGAAAAATATTTATAAGA+AGG - chr5.1:1997711-1997730 None:intergenic 15.0%
!! TAAGCATTAATTATATATGT+CGG - chr5.1:1996435-1996454 None:intergenic 15.0%
!! TATATACATAAAAAGTCAAA+TGG - chr5.1:1995375-1995394 None:intergenic 15.0%
!! TATTCAATAAATAATGTATG+TGG + chr5.1:1995439-1995458 MS.gene21861:intron 15.0%
!! TCATTGCATAAATAATTATT+TGG + chr5.1:1994989-1995008 MS.gene21861:intron 15.0%
!! TTTAAATATATGAGTAGTTT+GGG - chr5.1:1993340-1993359 None:intergenic 15.0%
!!! ACAAATATTAATGTTTTGTT+TGG - chr5.1:1996355-1996374 None:intergenic 15.0%
!!! AGCATAAATTTTATTTAATG+AGG - chr5.1:1997990-1998009 None:intergenic 15.0%
!!! ATCACATAAATTTTTTTTTC+AGG - chr5.1:1995088-1995107 None:intergenic 15.0%
!!! ATTATAAAAATTCCTTTTGT+TGG - chr5.1:1997054-1997073 None:intergenic 15.0%
!!! CTTAAGTTTCTTTTATAAAT+AGG - chr5.1:1994829-1994848 None:intergenic 15.0%
!!! TAAGATTTCTAAACATTTTT+TGG + chr5.1:1996644-1996663 MS.gene21861:intron 15.0%
!!! TAAGCAAAAATTCATTTTTT+AGG + chr5.1:1995414-1995433 MS.gene21861:intron 15.0%
!!! TAAGCAAAATTTTACTTTTT+AGG - chr5.1:1995503-1995522 None:intergenic 15.0%
!!! TATAAATAGGATAGTTTTTT+GGG - chr5.1:1994816-1994835 None:intergenic 15.0%
!!! TGGTAATTAAAAAAAAGTTT+TGG - chr5.1:1997376-1997395 None:intergenic 15.0%
!!! TTATAAATAGGATAGTTTTT+TGG - chr5.1:1994817-1994836 None:intergenic 15.0%
!!! TTTTAATCTCTCTTATAAAT+AGG + chr5.1:1994897-1994916 MS.gene21861:intron 15.0%
!! AAATCTATATTTAACAACAG+AGG + chr5.1:1993986-1994005 MS.gene21861:CDS 20.0%
!! AAATTTATGTGATTGAGAAT+TGG + chr5.1:1995095-1995114 MS.gene21861:intron 20.0%
!! AGAAAGGTAAATATTATTAG+GGG - chr5.1:1996147-1996166 None:intergenic 20.0%
!! AGAGAAAATATATGAAACAA+TGG - chr5.1:1994032-1994051 None:intergenic 20.0%
!! AGAGAAAGGTAAATATTATT+AGG - chr5.1:1996149-1996168 None:intergenic 20.0%
!! ATGAAAGAAAGAAAATTACT+AGG - chr5.1:1997733-1997752 None:intergenic 20.0%
!! ATTAATTATATATGTCGGTA+GGG - chr5.1:1996430-1996449 None:intergenic 20.0%
!! GAGAAAGGTAAATATTATTA+GGG - chr5.1:1996148-1996167 None:intergenic 20.0%
!! TAATTACTTATTAATAGAGG+AGG + chr5.1:1995828-1995847 MS.gene21861:intron 20.0%
!! TCTGTTGTTAAATATAGATT+TGG - chr5.1:1993987-1994006 None:intergenic 20.0%
!! TTAGGTGTATATACAATATT+GGG + chr5.1:1996867-1996886 MS.gene21861:intron 20.0%
!! TTCAATCAAAGTAAAAAACT+AGG + chr5.1:1994386-1994405 MS.gene21861:intron 20.0%
!! TTTCAGAAAAATTAAGAGAA+AGG - chr5.1:1996163-1996182 None:intergenic 20.0%
!!! CATAACTCTCTTTATTTTAT+AGG - chr5.1:1997256-1997275 None:intergenic 20.0%
!!! TTGCAATTATGTACAAATTT+TGG + chr5.1:1995919-1995938 MS.gene21861:intron 20.0%
!!! TTTTCTATGAAATACCTTAT+CGG + chr5.1:1995312-1995331 MS.gene21861:intron 20.0%
! AAAAAACTAGGCAAATTCTA+TGG + chr5.1:1994398-1994417 MS.gene21861:intron 25.0%
! AAAGAACTCATCAAATTCAA+AGG + chr5.1:1997919-1997938 MS.gene21861:CDS 25.0%
! AACAAAAACTACTATTGATG+AGG + chr5.1:1997825-1997844 MS.gene21861:CDS 25.0%
! AAGACAACTGAAAATTTGAA+AGG + chr5.1:1996189-1996208 MS.gene21861:intron 25.0%
! AATCAATCAAATGAGAATGA+AGG - chr5.1:1998523-1998542 None:intergenic 25.0%
! AATCGGTCTTTCTATTATAA+TGG - chr5.1:1998450-1998469 None:intergenic 25.0%
! AATTAACCGATCGTAAAAAA+GGG + chr5.1:1996302-1996321 MS.gene21861:intron 25.0%
! AGTTCATACATCAGAAAATA+AGG + chr5.1:1995552-1995571 MS.gene21861:intron 25.0%
! ATCAATACACTCAAATCTTT+AGG - chr5.1:1994428-1994447 None:intergenic 25.0%
! ATGTATCTTACAAATAGGAT+TGG - chr5.1:1994957-1994976 None:intergenic 25.0%
! ATTCTAGTAGTATTCTTTGT+TGG - chr5.1:1995696-1995715 None:intergenic 25.0%
! CAATTTAGTCCTTAACAAAT+CGG - chr5.1:1998467-1998486 None:intergenic 25.0%
! CATTAATTATATATGTCGGT+AGG - chr5.1:1996431-1996450 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - chr5.1:1995478-1995497 None:intergenic 25.0%
! CTGAAAGAAGATTATTTAAC+TGG + chr5.1:1997410-1997429 MS.gene21861:intron 25.0%
! CTTAGGTGTATATACAATAT+TGG + chr5.1:1996866-1996885 MS.gene21861:intron 25.0%
! GAAAAATGTAAACAATTCAC+CGG - chr5.1:1993798-1993817 None:intergenic 25.0%
! TAATTAACCGATCGTAAAAA+AGG + chr5.1:1996301-1996320 MS.gene21861:intron 25.0%
! TACATAAAAAGTCAAATGGA+AGG - chr5.1:1995371-1995390 None:intergenic 25.0%
! TCCTCAAAATTATCAAGTTT+AGG - chr5.1:1993303-1993322 None:intergenic 25.0%
! TTGTAAAATTACTTCCGATA+AGG - chr5.1:1995329-1995348 None:intergenic 25.0%
! TTTCAGATTCATTGAATAAC+TGG - chr5.1:1997396-1997415 None:intergenic 25.0%
!! ATTTTGCTTATATTTGTGAC+TGG + chr5.1:1995513-1995532 MS.gene21861:intron 25.0%
!! CTTTTGCCTGTTAAAATATT+TGG - chr5.1:1998182-1998201 None:intergenic 25.0%
!! GGTGAATTGTTTACATTTTT+CGG + chr5.1:1993797-1993816 MS.gene21861:CDS 25.0%
!! TGATGCATAAATTTGAGATT+GGG + chr5.1:1994099-1994118 MS.gene21861:CDS 25.0%
!! TTGATGCATAAATTTGAGAT+TGG + chr5.1:1994098-1994117 MS.gene21861:CDS 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG - chr5.1:1995404-1995423 None:intergenic 25.0%
!!! AATTTTTGAAGTAAGAGTAC+CGG + chr5.1:1994756-1994775 MS.gene21861:intron 25.0%
!!! ACCTAAACTTGATAATTTTG+AGG + chr5.1:1993299-1993318 MS.gene21861:CDS 25.0%
!!! ACTATTTCTTCTTCTTTTGT+TGG + chr5.1:1996541-1996560 MS.gene21861:intron 25.0%
!!! ATGGAACCAAATATTTTAAC+AGG + chr5.1:1998173-1998192 MS.gene21861:intron 25.0%
!!! CAAATATTTTAACAGGCAAA+AGG + chr5.1:1998180-1998199 MS.gene21861:intron 25.0%
!!! TGTTGGTGAAATATTTTTTG+AGG - chr5.1:1995679-1995698 None:intergenic 25.0%
!!! TTTTTACCCTTTTTTACGAT+CGG - chr5.1:1996311-1996330 None:intergenic 25.0%
AAAACTACTATTGATGAGGA+CGG + chr5.1:1997829-1997848 MS.gene21861:CDS 30.0%
AAAGGACTTTATAGCTAAAC+AGG + chr5.1:1998276-1998295 MS.gene21861:CDS 30.0%
ACCTAAATTAAACATGTGTC+TGG + chr5.1:1997341-1997360 MS.gene21861:intron 30.0%
AGTTTGATCTGAGTTCAATA+AGG + chr5.1:1994216-1994235 MS.gene21861:CDS 30.0%
ATCTTACAAATAGGATTGGA+GGG - chr5.1:1994953-1994972 None:intergenic 30.0%
ATGCCCTCATTAAATTAACT+TGG - chr5.1:1995131-1995150 None:intergenic 30.0%
ATGTGGTATTTATTGTGAAC+AGG + chr5.1:1998595-1998614 MS.gene21861:intron 30.0%
CTAGAATACATACGAAAAAC+TGG - chr5.1:1996773-1996792 None:intergenic 30.0%
CTCCAATATTTGACTAAAAG+TGG + chr5.1:1998571-1998590 MS.gene21861:intron 30.0%
TAAGGACTAAATTGTGTCAT+CGG + chr5.1:1998473-1998492 MS.gene21861:intron 30.0%
TATACAGAAACATAAGGTGA+CGG + chr5.1:1994136-1994155 MS.gene21861:CDS 30.0%
TATAGATAAATGACTTCAGC+TGG + chr5.1:1995799-1995818 MS.gene21861:intron 30.0%
TATCTTACAAATAGGATTGG+AGG - chr5.1:1994954-1994973 None:intergenic 30.0%
TCTAACTGAAGAGATTGTAA+AGG + chr5.1:1998258-1998277 MS.gene21861:CDS 30.0%
TGGCCAAGTTAATTTAATGA+GGG + chr5.1:1995125-1995144 MS.gene21861:intron 30.0%
TGTACATAATTGCAAAGACA+AGG - chr5.1:1995914-1995933 None:intergenic 30.0%
TTAGGTTCACAAATCTAACT+AGG - chr5.1:1997327-1997346 None:intergenic 30.0%
TTCTAAGCAATAGCATTTAC+CGG + chr5.1:1996582-1996601 MS.gene21861:intron 30.0%
! ACCAGACACATGTTTAATTT+AGG - chr5.1:1997345-1997364 None:intergenic 30.0%
! GGTTAAGGAAAAACTTTTGT+AGG - chr5.1:1996691-1996710 None:intergenic 30.0%
! TGGTGTAGAATTTGACTTTA+AGG + chr5.1:1993752-1993771 MS.gene21861:CDS 30.0%
! TTGTTAGGTTGCTTATGAAT+TGG - chr5.1:1997139-1997158 None:intergenic 30.0%
! TTTTAGTCAGAGACAGAATT+GGG - chr5.1:1998411-1998430 None:intergenic 30.0%
! TTTTATGTATATACACCCTC+CGG + chr5.1:1995382-1995401 MS.gene21861:intron 30.0%
!! ATAGAAAGACCGATTTGTTA+AGG + chr5.1:1998455-1998474 MS.gene21861:intron 30.0%
!! ATTTTAGTCAGAGACAGAAT+TGG - chr5.1:1998412-1998431 None:intergenic 30.0%
!! TGGTCTTATACAGAAACATA+AGG + chr5.1:1994130-1994149 MS.gene21861:CDS 30.0%
!! TTTTATTTCGTGGACGTTTT+TGG - chr5.1:1994546-1994565 None:intergenic 30.0%
!!! AATTTTTTGCATGTGTCTTC+AGG + chr5.1:1997461-1997480 MS.gene21861:intron 30.0%
!!! ATTTTTTGCATGTGTCTTCA+GGG + chr5.1:1997462-1997481 MS.gene21861:intron 30.0%
!!! GGAAGTAGCACTTTTTTTTT+TGG + chr5.1:1996210-1996229 MS.gene21861:intron 30.0%
!!! GGTGAAATATTTTTTGAGGA+AGG - chr5.1:1995675-1995694 None:intergenic 30.0%
!!! TAGTTTTTTGGGAACTTCTA+TGG - chr5.1:1994805-1994824 None:intergenic 30.0%
!!! TGCCACTTTTAGTCAAATAT+TGG - chr5.1:1998576-1998595 None:intergenic 30.0%
AAAATTGTGAGGGACCATAA+TGG - chr5.1:1998381-1998400 None:intergenic 35.0%
AAATGTAAACAATTCACCGG+TGG - chr5.1:1993795-1993814 None:intergenic 35.0%
AAATTGTGAGGGACCATAAT+GGG - chr5.1:1998380-1998399 None:intergenic 35.0%
AACAGAAGTAGATACTTCTG+CGG - chr5.1:1993274-1993293 None:intergenic 35.0%
ACTACACCATCACAGTTTAA+AGG - chr5.1:1995862-1995881 None:intergenic 35.0%
ACTAGAGTGAAAACCCATTA+TGG + chr5.1:1998364-1998383 MS.gene21861:intron 35.0%
ACTAGTGTTTATTGGCAACT+AGG - chr5.1:1996978-1996997 None:intergenic 35.0%
ACTTTGACCTTATACGTGTT+AGG - chr5.1:1996927-1996946 None:intergenic 35.0%
ATGGTACACCAGCAAAATTA+AGG - chr5.1:1994786-1994805 None:intergenic 35.0%
ATTTGACTAAAAGTGGCATG+TGG + chr5.1:1998578-1998597 MS.gene21861:intron 35.0%
CACTTAACCTAACACGTATA+AGG + chr5.1:1996917-1996936 MS.gene21861:intron 35.0%
CCAATAAACACTAGTGATAG+AGG + chr5.1:1996983-1997002 MS.gene21861:intron 35.0%
CCTCTATCACTAGTGTTTAT+TGG - chr5.1:1996986-1997005 None:intergenic 35.0%
CTGGCCAAGTTAATTTAATG+AGG + chr5.1:1995124-1995143 MS.gene21861:intron 35.0%
CTTATACGTGTTAGGTTAAG+TGG - chr5.1:1996919-1996938 None:intergenic 35.0%
CTTCAACTTCAACCAACAAA+AGG + chr5.1:1997039-1997058 MS.gene21861:intron 35.0%
GAATATGATTGCAAGATACC+AGG + chr5.1:1996473-1996492 MS.gene21861:intron 35.0%
TAACCGCTCAACAAATTGTT+CGG + chr5.1:1995169-1995188 MS.gene21861:intron 35.0%
TAGATGCCTTTAAACTGTGA+TGG + chr5.1:1995853-1995872 MS.gene21861:intron 35.0%
TCATAATTACATCGCCTTTC+TGG - chr5.1:1993545-1993564 None:intergenic 35.0%
TCCATTTGATCTTACCACAA+AGG - chr5.1:1998233-1998252 None:intergenic 35.0%
TCTCTTGGTTATAATCAACC+TGG + chr5.1:1997624-1997643 MS.gene21861:CDS 35.0%
TGATCTGAGTTCAATAAGGT+TGG + chr5.1:1994220-1994239 MS.gene21861:CDS 35.0%
TGCTTATATTTGTGACTGGA+GGG + chr5.1:1995517-1995536 MS.gene21861:intron 35.0%
TGGTATTTATTGTGAACAGG+TGG + chr5.1:1998598-1998617 MS.gene21861:intron 35.0%
TGGTTAGAGATAGGTATATC+TGG - chr5.1:1993372-1993391 None:intergenic 35.0%
TGTGTTAGAATCACTCCTTT+AGG - chr5.1:1993918-1993937 None:intergenic 35.0%
TTGCTTATATTTGTGACTGG+AGG + chr5.1:1995516-1995535 MS.gene21861:intron 35.0%
TTGTTTGAAGATTTCAGCAC+TGG - chr5.1:1993658-1993677 None:intergenic 35.0%
TTTGTCTGTTGCATATGTTG+AGG - chr5.1:1996614-1996633 None:intergenic 35.0%
! AGGAAAAACTTTTGTAGGCT+AGG - chr5.1:1996686-1996705 None:intergenic 35.0%
! CACGTATAAGGTCAAAGTTT+TGG + chr5.1:1996929-1996948 MS.gene21861:intron 35.0%
! GAATTTTACCTGTCCCAAAA+CGG - chr5.1:1994312-1994331 None:intergenic 35.0%
! GCATACCTTTCATGATTTGT+TGG - chr5.1:1997668-1997687 None:intergenic 35.0%
! GGAAAAACTTTTGTAGGCTA+GGG - chr5.1:1996685-1996704 None:intergenic 35.0%
! TAGGGGTATGTTAACAACTT+AGG - chr5.1:1996130-1996149 None:intergenic 35.0%
!! ACCTTTCTGAATTTGCTGAT+CGG + chr5.1:1993421-1993440 MS.gene21861:CDS 35.0%
!! GATTTTTCGACATTGGAGAT+AGG - chr5.1:1993496-1993515 None:intergenic 35.0%
!! GTGTACTCGTATTTTTGCTT+GGG + chr5.1:1996825-1996844 MS.gene21861:intron 35.0%
!! TAGTGATAGAGGTGTCATAT+GGG + chr5.1:1996994-1997013 MS.gene21861:intron 35.0%
!! TGGACTAGTATGCTATTGAA+GGG + chr5.1:1995939-1995958 MS.gene21861:intron 35.0%
!! TGTGTACTCGTATTTTTGCT+TGG + chr5.1:1996824-1996843 MS.gene21861:intron 35.0%
!! TTGGACTAGTATGCTATTGA+AGG + chr5.1:1995938-1995957 MS.gene21861:intron 35.0%
!!! TCAATAAGGTTGGTTTTGTC+TGG + chr5.1:1994230-1994249 MS.gene21861:CDS 35.0%
!!! TTTTTTGCATGTGTCTTCAG+GGG + chr5.1:1997463-1997482 MS.gene21861:intron 35.0%
AAAGTTCTTGACCCTGAAAC+TGG + chr5.1:1997597-1997616 MS.gene21861:CDS 40.0%
AACAAGTGTAGCTCAACAAG+TGG + chr5.1:1993950-1993969 MS.gene21861:CDS 40.0%
ACTAGTATGCTATTGAAGGG+AGG + chr5.1:1995942-1995961 MS.gene21861:intron 40.0%
AGATACCAGGACATTAAACC+TGG + chr5.1:1996486-1996505 MS.gene21861:intron 40.0%
ATCGAACGAAGAGGATATTC+CGG + chr5.1:1993830-1993849 MS.gene21861:CDS 40.0%
CAAACTCCGTCAAAATGATC+AGG + chr5.1:1993728-1993747 MS.gene21861:CDS 40.0%
CAAACTTGACAACGTGACTT+AGG + chr5.1:1996849-1996868 MS.gene21861:intron 40.0%
CAAGAGAATGACCAGTTTCA+GGG - chr5.1:1997611-1997630 None:intergenic 40.0%
CCAGCAAAATTAAGGTGTAC+CGG - chr5.1:1994778-1994797 None:intergenic 40.0%
CCTGTTGTTCCTGAAGAAAA+TGG - chr5.1:1993891-1993910 None:intergenic 40.0%
GATTTCTGAATCGAACGAAG+AGG + chr5.1:1993821-1993840 MS.gene21861:CDS 40.0%
GCATATGTTGAGGATCATAC+CGG - chr5.1:1996604-1996623 None:intergenic 40.0%
GCCTTTGTGGTAAGATCAAA+TGG + chr5.1:1998229-1998248 MS.gene21861:CDS 40.0%
GGAACAACAGGATTACCTAA+AGG + chr5.1:1993900-1993919 MS.gene21861:CDS 40.0%
GTAGTATTTGTGAAGAGCTG+TGG + chr5.1:1995877-1995896 MS.gene21861:intron 40.0%
TAAAGAATCCCAAAGAAGCG+TGG - chr5.1:1996712-1996731 None:intergenic 40.0%
TCCAAATTAGGCATCCAGAA+AGG + chr5.1:1993528-1993547 MS.gene21861:CDS 40.0%
TCGACATTGGAGATAGGTTT+CGG - chr5.1:1993490-1993509 None:intergenic 40.0%
TGACAAGGAGGAGTAAATAC+TGG + chr5.1:1996517-1996536 MS.gene21861:intron 40.0%
TGCTTATATTTGTGACCGGA+GGG - chr5.1:1995400-1995419 None:intergenic 40.0%
TTACTCCTCCTTGTCATTGT+AGG - chr5.1:1996513-1996532 None:intergenic 40.0%
TTCCTCAATATCTTTCCTGC+AGG - chr5.1:1998677-1998696 None:intergenic 40.0%
TTCCTTAACCACGCTTCTTT+GGG + chr5.1:1996701-1996720 MS.gene21861:intron 40.0%
TTCGAAGCAGTAGGTATGAA+GGG - chr5.1:1993400-1993419 None:intergenic 40.0%
TTGAAGTTGACAACATCACG+TGG - chr5.1:1997213-1997232 None:intergenic 40.0%
TTGCTTATATTTGTGACCGG+AGG - chr5.1:1995401-1995420 None:intergenic 40.0%
TTTCCTTAACCACGCTTCTT+TGG + chr5.1:1996700-1996719 MS.gene21861:intron 40.0%
TTTCGAAGCAGTAGGTATGA+AGG - chr5.1:1993401-1993420 None:intergenic 40.0%
TTTGTGAGAAACTCTTGACG+TGG + chr5.1:1995223-1995242 MS.gene21861:intron 40.0%
! AGAAAGGTTTTCGAAGCAGT+AGG - chr5.1:1993409-1993428 None:intergenic 40.0%
! CACCAACCTGATCATTTTGA+CGG - chr5.1:1993737-1993756 None:intergenic 40.0%
! CCATTTTCTTCAGGAACAAC+AGG + chr5.1:1993888-1993907 MS.gene21861:CDS 40.0%
! GGTCCCTCACAATTTTCTTA+CGG + chr5.1:1998385-1998404 MS.gene21861:intron 40.0%
! TAGAATTCCTCAAGCCGTTT+TGG + chr5.1:1994295-1994314 MS.gene21861:CDS 40.0%
! TTCATTGCTGCTTCCATGAT+TGG + chr5.1:1993600-1993619 MS.gene21861:CDS 40.0%
! TTTGAGATTGGGACTTTGCT+TGG + chr5.1:1994110-1994129 MS.gene21861:CDS 40.0%
!! AGAATTCCTCAAGCCGTTTT+GGG + chr5.1:1994296-1994315 MS.gene21861:CDS 40.0%
!! AGACCGAACAATTTGTTGAG+CGG - chr5.1:1995175-1995194 None:intergenic 40.0%
!! AGCTTTCTAGCTTTGCTCTT+AGG - chr5.1:1998703-1998722 None:intergenic 40.0%
!! ATTTCAGCACTGGTGTAGAA+AGG - chr5.1:1993648-1993667 None:intergenic 40.0%
!! CTAGTGATAGAGGTGTCATA+TGG + chr5.1:1996993-1997012 MS.gene21861:intron 40.0%
AACCCATTCCCAACAAGTTC+AGG + chr5.1:1997540-1997559 MS.gene21861:CDS 45.0%
AACCTGGACCTACAATGACA+AGG + chr5.1:1996502-1996521 MS.gene21861:intron 45.0%
AAGAGAAAACAGCCACGTCA+AGG - chr5.1:1995204-1995223 None:intergenic 45.0%
ACAGCTGCATCTGCAATAGA+TGG - chr5.1:1998075-1998094 None:intergenic 45.0%
AGAGAAAACAGCCACGTCAA+GGG - chr5.1:1995203-1995222 None:intergenic 45.0%
AGATACTTCTGCGGTCTGTT+TGG - chr5.1:1993265-1993284 None:intergenic 45.0%
AGCTAGCGTACGAAGAAGAA+AGG + chr5.1:1996791-1996810 MS.gene21861:intron 45.0%
AGTGTAGCTCAACAAGTGGA+CGG + chr5.1:1993954-1993973 MS.gene21861:CDS 45.0%
ATAGGTTTCGGCGTAGGTAT+AGG - chr5.1:1993478-1993497 None:intergenic 45.0%
ATCTTTCCTGCAGGAGACTT+TGG - chr5.1:1998668-1998687 None:intergenic 45.0%
CAACTAGGCAGCAATTGAGA+CGG - chr5.1:1996963-1996982 None:intergenic 45.0%
CAATGTCGAAAAATCGCAGC+TGG + chr5.1:1993501-1993520 MS.gene21861:CDS 45.0%
CCAAAGACATGGACAGTACT+GGG - chr5.1:1997509-1997528 None:intergenic 45.0%
CCAAGAGAATGACCAGTTTC+AGG - chr5.1:1997612-1997631 None:intergenic 45.0%
CCACGTATGCAAATTTCACC+AGG - chr5.1:1997645-1997664 None:intergenic 45.0%
CCAGTACTGTCCATGTCTTT+GGG + chr5.1:1997507-1997526 MS.gene21861:CDS 45.0%
CCTGAAACTGGTCATTCTCT+TGG + chr5.1:1997609-1997628 MS.gene21861:CDS 45.0%
CCTGGTGAAATTTGCATACG+TGG + chr5.1:1997642-1997661 MS.gene21861:CDS 45.0%
CGTGGCCAACAAATCATGAA+AGG + chr5.1:1997660-1997679 MS.gene21861:CDS 45.0%
CTACTATTGATGAGGACGGT+TGG + chr5.1:1997833-1997852 MS.gene21861:CDS 45.0%
CTCCGTCAAAATGATCAGGT+TGG + chr5.1:1993732-1993751 MS.gene21861:CDS 45.0%
CTCCTGCAGGAAAGATATTG+AGG + chr5.1:1998672-1998691 MS.gene21861:CDS 45.0%
GATCTTACCACAAAGGCAAC+AGG - chr5.1:1998226-1998245 None:intergenic 45.0%
GATTGAGAATTGGACAGCTC+TGG + chr5.1:1995105-1995124 MS.gene21861:intron 45.0%
GCCGATCAGCAAATTCAGAA+AGG - chr5.1:1993425-1993444 None:intergenic 45.0%
GCCTTTCTGGATGCCTAATT+TGG - chr5.1:1993532-1993551 None:intergenic 45.0%
GGGCCGTAAGAAAATTGTGA+GGG - chr5.1:1998391-1998410 None:intergenic 45.0%
GTCTGTTTGGCATCAACAGA+AGG - chr5.1:1993252-1993271 None:intergenic 45.0%
GTGGCAGCAACGATTAAACA+AGG - chr5.1:1993447-1993466 None:intergenic 45.0%
TAGGTCCAGGTTTAATGTCC+TGG - chr5.1:1996494-1996513 None:intergenic 45.0%
TCGAAGCAGTAGGTATGAAG+GGG - chr5.1:1993399-1993418 None:intergenic 45.0%
TCTTCAAGCTCCTTCCCTAA+CGG - chr5.1:1994263-1994282 None:intergenic 45.0%
TGAAGTTCCTGTTGCCTTTG+TGG + chr5.1:1998216-1998235 MS.gene21861:CDS 45.0%
TGGGCCGTAAGAAAATTGTG+AGG - chr5.1:1998392-1998411 None:intergenic 45.0%
TGTTTAATCGTTGCTGCCAC+CGG + chr5.1:1993447-1993466 MS.gene21861:CDS 45.0%
TTATTGTGTGCACTGAGAGC+AGG + chr5.1:1994062-1994081 MS.gene21861:CDS 45.0%
! AAGACCTTCAAGTTCAGCAG+GGG - chr5.1:1998040-1998059 None:intergenic 45.0%
! ACAGAAACATAAGGTGACGG+TGG + chr5.1:1994139-1994158 MS.gene21861:CDS 45.0%
! AGAAGACCTTCAAGTTCAGC+AGG - chr5.1:1998042-1998061 None:intergenic 45.0%
! ATCCCAAAGAAGCGTGGTTA+AGG - chr5.1:1996706-1996725 None:intergenic 45.0%
! CACATGAGCCTGAACTTGTT+GGG - chr5.1:1997551-1997570 None:intergenic 45.0%
! CCGGTACACCTTAATTTTGC+TGG + chr5.1:1994775-1994794 MS.gene21861:intron 45.0%
! GAAGACCTTCAAGTTCAGCA+GGG - chr5.1:1998041-1998060 None:intergenic 45.0%
! GGCGTAGGTATAGGTTTTTC+CGG - chr5.1:1993469-1993488 None:intergenic 45.0%
! GTAGGTATAGGTTTTTCCGG+TGG - chr5.1:1993466-1993485 None:intergenic 45.0%
! TGGCTTCATACTGGTGATGT+TGG + chr5.1:1997853-1997872 MS.gene21861:CDS 45.0%
!! AGCACTGGTGTAGAAAGGAT+TGG - chr5.1:1993643-1993662 None:intergenic 45.0%
!! AGCCTGAACTTGTTGGGAAT+GGG - chr5.1:1997545-1997564 None:intergenic 45.0%
!! CAGCTGCGATTTTTCGACAT+TGG - chr5.1:1993503-1993522 None:intergenic 45.0%
!! GCAGCTGGTTTGTCCAAATT+AGG + chr5.1:1993516-1993535 MS.gene21861:CDS 45.0%
!! GGTAGGGACGAGTTTGTTTT+GGG - chr5.1:1996414-1996433 None:intergenic 45.0%
!! AATCTAAAAAAAAAAAAAAA+TGG + chr5.1:1996015-1996034 MS.gene21861:intron 5.0%
!!! TTTAAATTATTTTATTTGTT+AGG - chr5.1:1997154-1997173 None:intergenic 5.0%
!!! TTTATAAATTTCAATATTTT+AGG + chr5.1:1997781-1997800 MS.gene21861:intron 5.0%
AAACAGCCACGTCAAGGGTA+TGG - chr5.1:1995198-1995217 None:intergenic 50.0%
ACAATTCACCGGTGGTTCGT+CGG - chr5.1:1993787-1993806 None:intergenic 50.0%
AGGCAAAAGGATGTTGCTGC+TGG + chr5.1:1998193-1998212 MS.gene21861:intron 50.0%
CCAACAAGTTCAGGCTCATG+TGG + chr5.1:1997549-1997568 MS.gene21861:CDS 50.0%
CCACATGAGCCTGAACTTGT+TGG - chr5.1:1997552-1997571 None:intergenic 50.0%
CCCAAAGACATGGACAGTAC+TGG - chr5.1:1997510-1997529 None:intergenic 50.0%
CCCAGTACTGTCCATGTCTT+TGG + chr5.1:1997506-1997525 MS.gene21861:CDS 50.0%
CGAAGAGGATATTCCGGTAG+TGG + chr5.1:1993836-1993855 MS.gene21861:CDS 50.0%
CGAAGCAGTAGGTATGAAGG+GGG - chr5.1:1993398-1993417 None:intergenic 50.0%
CTCCTTGTCATTGTAGGTCC+AGG - chr5.1:1996507-1996526 None:intergenic 50.0%
CTGGACCTACAATGACAAGG+AGG + chr5.1:1996505-1996524 MS.gene21861:intron 50.0%
GATAACAACCGACGAACCAC+CGG + chr5.1:1993776-1993795 MS.gene21861:CDS 50.0%
GCAATTCCAAAGTCTCCTGC+AGG + chr5.1:1998659-1998678 MS.gene21861:CDS 50.0%
TCTGGATCGATCTCCACTAC+CGG - chr5.1:1993852-1993871 None:intergenic 50.0%
TGCATGTGTCTTCAGGGGTA+CGG + chr5.1:1997468-1997487 MS.gene21861:intron 50.0%
TTCGCCAACGCCAAAACCAA+CGG - chr5.1:1994179-1994198 None:intergenic 50.0%
TTGGAGATAGGTTTCGGCGT+AGG - chr5.1:1993484-1993503 None:intergenic 50.0%
! AGACCTTCAAGTTCAGCAGG+GGG - chr5.1:1998039-1998058 None:intergenic 50.0%
! GGTGTAGAAAGGATTGGCAG+TGG - chr5.1:1993637-1993656 None:intergenic 50.0%
! GTGGCGCTACCATTTTCTTC+AGG + chr5.1:1993879-1993898 MS.gene21861:CDS 50.0%
!! CGGTAGGGACGAGTTTGTTT+TGG - chr5.1:1996415-1996434 None:intergenic 50.0%
!! GAGCCTGAACTTGTTGGGAA+TGG - chr5.1:1997546-1997565 None:intergenic 50.0%
ACCTGTCCCAAAACGGCTTG+AGG - chr5.1:1994305-1994324 None:intergenic 55.0%
AGATCAAACTCCGCCACCGT+CGG - chr5.1:1994206-1994225 None:intergenic 55.0%
AGCAGTAGGTATGAAGGGGG+AGG - chr5.1:1993395-1993414 None:intergenic 55.0%
AGGGGGAGGTGGTTAGAGAT+AGG - chr5.1:1993381-1993400 None:intergenic 55.0%
AGTAGGTATGAAGGGGGAGG+TGG - chr5.1:1993392-1993411 None:intergenic 55.0%
GGAGATCGATCCAGAAGACG+CGG + chr5.1:1993857-1993876 MS.gene21861:CDS 55.0%
GGCAGCAATTGAGACGGTTG+AGG - chr5.1:1996957-1996976 None:intergenic 55.0%
GTGCACTGAGAGCAGGAAGT+GGG + chr5.1:1994069-1994088 MS.gene21861:CDS 55.0%
TGCACTGAGAGCAGGAAGTG+GGG + chr5.1:1994070-1994089 MS.gene21861:CDS 55.0%
TGTGCACTGAGAGCAGGAAG+TGG + chr5.1:1994068-1994087 MS.gene21861:CDS 55.0%
! ACATAAGGTGACGGTGGCGA+TGG + chr5.1:1994145-1994164 MS.gene21861:CDS 55.0%
! TCAGGGGTACGGTATGACAG+AGG + chr5.1:1997479-1997498 MS.gene21861:intron 55.0%
! TGCTGCTTCCATGATTGGCG+CGG + chr5.1:1993605-1993624 MS.gene21861:CDS 55.0%
!! GAGGACGGTTGGCTTCATAC+TGG + chr5.1:1997844-1997863 MS.gene21861:CDS 55.0%
!! TGTCTGGTGCTGCACCGTTA+GGG + chr5.1:1994246-1994265 MS.gene21861:CDS 55.0%
!! TTGTCTGGTGCTGCACCGTT+AGG + chr5.1:1994245-1994264 MS.gene21861:CDS 55.0%
!!! TCCTCAAGCCGTTTTGGGAC+AGG + chr5.1:1994301-1994320 MS.gene21861:CDS 55.0%
CGGTCTCCATACCCTTGACG+TGG + chr5.1:1995189-1995208 MS.gene21861:intron 60.0%
GATCGATCCAGAAGACGCGG+TGG + chr5.1:1993860-1993879 MS.gene21861:CDS 60.0%
GCCAACGCCAAAACCAACGG+CGG - chr5.1:1994176-1994195 None:intergenic 60.0%
GGGTACGGTATGACAGAGGC+AGG + chr5.1:1997483-1997502 MS.gene21861:CDS 60.0%
GTGCCCCCTGCTGAACTTGA+AGG + chr5.1:1998033-1998052 MS.gene21861:CDS 60.0%
! TAAGGTGACGGTGGCGATGG+TGG + chr5.1:1994148-1994167 MS.gene21861:CDS 60.0%
!! TGGTGCTGCACCGTTAGGGA+AGG + chr5.1:1994250-1994269 MS.gene21861:CDS 60.0%
!!! GGTGGTTCCGCCGTTGGTTT+TGG + chr5.1:1994166-1994185 MS.gene21861:CDS 60.0%
!!! TCCGCCGTTGGTTTTGGCGT+TGG + chr5.1:1994172-1994191 MS.gene21861:CDS 60.0%
GGTTGCGACCGCGCCAATCA+TGG - chr5.1:1993616-1993635 None:intergenic 65.0%
GTTGGCGAAGAGTCCGACGG+TGG + chr5.1:1994190-1994209 MS.gene21861:CDS 65.0%
!! GGCGTTGGCGAAGAGTCCGA+CGG + chr5.1:1994187-1994206 MS.gene21861:CDS 65.0%
GGCGAAGAGTCCGACGGTGG+CGG + chr5.1:1994193-1994212 MS.gene21861:CDS 70.0%
GGTAGCGCCACCGCGTCTTC+TGG - chr5.1:1993870-1993889 None:intergenic 70.0%
! GGCGATGGTGGTTCCGCCGT+TGG + chr5.1:1994160-1994179 MS.gene21861:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 1993234 1998730 1993234 ID=MS.gene21861
chr5.1 mRNA 1993234 1998730 1993234 ID=MS.gene21861.t1;Parent=MS.gene21861
chr5.1 exon 1993234 1994322 1993234 ID=MS.gene21861.t1.exon1;Parent=MS.gene21861.t1
chr5.1 CDS 1993234 1994322 1993234 ID=cds.MS.gene21861.t1;Parent=MS.gene21861.t1
chr5.1 exon 1997483 1997681 1997483 ID=MS.gene21861.t1.exon2;Parent=MS.gene21861.t1
chr5.1 CDS 1997483 1997681 1997483 ID=cds.MS.gene21861.t1;Parent=MS.gene21861.t1
chr5.1 exon 1997803 1997948 1997803 ID=MS.gene21861.t1.exon3;Parent=MS.gene21861.t1
chr5.1 CDS 1997803 1997948 1997803 ID=cds.MS.gene21861.t1;Parent=MS.gene21861.t1
chr5.1 exon 1998033 1998100 1998033 ID=MS.gene21861.t1.exon4;Parent=MS.gene21861.t1
chr5.1 CDS 1998033 1998100 1998033 ID=cds.MS.gene21861.t1;Parent=MS.gene21861.t1
chr5.1 exon 1998195 1998297 1998195 ID=MS.gene21861.t1.exon5;Parent=MS.gene21861.t1
chr5.1 CDS 1998195 1998297 1998195 ID=cds.MS.gene21861.t1;Parent=MS.gene21861.t1
chr5.1 exon 1998617 1998730 1998617 ID=MS.gene21861.t1.exon6;Parent=MS.gene21861.t1
chr5.1 CDS 1998617 1998730 1998617 ID=cds.MS.gene21861.t1;Parent=MS.gene21861.t1
Gene Sequence

>MS.gene21861

ATGTTGTCAGTAGCTCCTTCTGTTGATGCCAAACAGACCGCAGAAGTATCTACTTCTGTTTCTATACCTAAACTTGATAATTTTGAGGATGATTCTCTTTCTACCCAAACTACTCATATATTTAAATCAAAATTACCAGATATACCTATCTCTAACCACCTCCCCCTTCATACCTACTGCTTCGAAAACCTTTCTGAATTTGCTGATCGGCCTTGTTTAATCGTTGCTGCCACCGGAAAAACCTATACCTACGCCGAAACCTATCTCCAATGTCGAAAAATCGCAGCTGGTTTGTCCAAATTAGGCATCCAGAAAGGCGATGTAATTATGATTCTTCTACAAAACTCAGCTGAATTTGTTCTCTCTTTCATTGCTGCTTCCATGATTGGCGCGGTCGCAACCACTGCCAATCCTTTCTACACCAGTGCTGAAATCTTCAAACAAATAAAAGCTTCTGAAACAAAACTCATCATTACACAAGCAATGTACGTTGACAAACTCCGTCAAAATGATCAGGTTGGTGTAGAATTTGACTTTAAGGTGATAACAACCGACGAACCACCGGTGAATTGTTTACATTTTTCGGTGATTTCTGAATCGAACGAAGAGGATATTCCGGTAGTGGAGATCGATCCAGAAGACGCGGTGGCGCTACCATTTTCTTCAGGAACAACAGGATTACCTAAAGGAGTGATTCTAACACACAAGAGTTTAACAACAAGTGTAGCTCAACAAGTGGACGGAGAGAATCCAAATCTATATTTAACAACAGAGGATGTTCTTCTTTGTGTTCTTCCATTGTTTCATATATTTTCTCTCAACAGTGTGTTATTGTGTGCACTGAGAGCAGGAAGTGGGGTTTTGTTGATGCATAAATTTGAGATTGGGACTTTGCTTGGTCTTATACAGAAACATAAGGTGACGGTGGCGATGGTGGTTCCGCCGTTGGTTTTGGCGTTGGCGAAGAGTCCGACGGTGGCGGAGTTTGATCTGAGTTCAATAAGGTTGGTTTTGTCTGGTGCTGCACCGTTAGGGAAGGAGCTTGAAGAAACTCTTCATAATAGAATTCCTCAAGCCGTTTTGGGACAGGTAAAATTCTTTTCTTTGATTCTGTTTTTGTCTTTTACGTGTTTTCAGTTAAATTCTAAGTTTTTCAATCAAAGTAAAAAACTAGGCAAATTCTATGGTACACCTAAAGATTTGAGTGTATTGATACACCAAATCATTGAATTAATAATTAAATGTGTTAGTTTTTGAAGAGAAAAATTGTTTTCTATCACCTATAATTGTAAATATTAAATCTTATTTACCAAAAACGTCCACGAAATAAAATTTAATTTTTATGAATTTTTAGTACTCGTAATAGATAATTTTGATTATTTTTTACAATAAAATGTAAAAAAAATTAGTATGATTTCTATAAACAATGAAATGATGTTTTTTTTCTTATGAAATGATATTTTCTAAAATATAAATATCAACACATAGCTCTTTATTTCATAAAAATGATAGTTAATTTATAAATTTTTGAAGTAAGAGTACCGGTACACCTTAATTTTGCTGGTGTACCATAGAAGTTCCCAAAAAACTATCCTATTTATAAAAGAAACTTAAGTTAATAAAATGGTTAAAAAATTGAATCTCATACATCAATTTTTATTTATTTTAATCTCTCTTATAAATAGGATCTGAGTGATCAGATTATACACATTTACTCCCTCCAATCCTATTTGTAAGATACATTTAATTTTTTATTCATTGCATAAATAATTATTTGGTCTATATTCTATATCAAGTACATTAATTAGTTAATGAATCTAAAAAATCAATTTTTTCTTATAAATAGGAGCGCCTGAAAAAAAAATTTATGTGATTGAGAATTGGACAGCTCTGGCCAAGTTAATTTAATGAGGGCATTCTAGTCATTAGAAACATTAACCGCTCAACAAATTGTTCGGTCTCCATACCCTTGACGTGGCTGTTTTCTCTTTTGTGAGAAACTCTTGACGTGGCTTACATCAATATCAATACAAATTTTAACTTTTTAAGAAAAAATAATATACTGTATGCTTTTACTATTTTCTATGAAATACCTTATCGGAAGTAATTTTACAAAAGTTTCATGCATGTTTAGCCTTCCATTTGACTTTTTATGTATATACACCCTCCGGTCACAAATATAAGCAAAAATTCATTTTTTAGGTTTATTCAATAAATAATGTATGTGGACTATTAAATAGACCACATACATCATTTATTGAATGAACCTAAAAAGTAAAATTTTGCTTATATTTGTGACTGGAGGGTGTATATGTTTAAGTTCATACATCAGAAAATAAGGAACTAAATATGAATTAAGTTTTAATAAGAATTGAATTTGATAAGAAAATATTTTATAGTATATGAGCTAAAATATATATATATATCTTACATTCTTACCTTCCTCAAAAAATATTTCACCAACAAAGAATACTACTAGAATGAGATATTATAATTGTTTCTCACAATTAAGTATTTTGATAGTAATTTAATATGGATAATATGTCAGCACAAAAGAAAAGAAATTATAGATAAATGACTTCAGCTGGTTCCTATAATTACTTATTAATAGAGGAGGACTAGATGCCTTTAAACTGTGATGGTGTAGTATTTGTGAAGAGCTGTGGCATGTTTTGTGCCTTGTCTTTGCAATTATGTACAAATTTTGGACTAGTATGCTATTGAAGGGAGGAATAATAATATGAGAAATGTTAATAAGTGTACTTGATGTATTTGTTTAGAAATCTAAAAAAAAAAAAAAATGGAGTTGTATTCAACATATTGAAACTTCAAAAAGAAACATTTTTTACATAAAATTTATAAACTATTTTCTCTTTGAATCATTAATAAGTGTCCTAAGTTGTTAACATACCCCTAATAATATTTACCTTTCTCTTAATTTTTCTGAAACGATTGAAGACAACTGAAAATTTGAAAGGAAGTAGCACTTTTTTTTTTGGACGTGAAATGAAGTAGCACTTTACTATTTAACTAGTAAATACAAATATTGTATTTTTAATAAATACATTAATTAACCGATCGTAAAAAAGGGTAAAAAATACATTAGTTTTTTACTTTGCCAAACAAAACATTAATATTTGTTTAACGTTTACGTAAATTAAAATTTTTAGACAATGTCCCAAAACAAACTCGTCCCTACCGACATATATAATTAATGCTTATATATTCGCATCATCGATGAATATGATTGCAAGATACCAGGACATTAAACCTGGACCTACAATGACAAGGAGGAGTAAATACTGGCACTATTTCTTCTTCTTTTGTTGGTATAATCTTTGCAATTATTTCTAAGCAATAGCATTTACCGGTATGATCCTCAACATATGCAACAGACAAATATGTTCTTTTAAGATTTCTAAACATTTTTTGGTTAAAATTATTTAGACCCTAGCCTACAAAAGTTTTTCCTTAACCACGCTTCTTTGGGATTCTTTAACAAAATTTTCGTATGTATTCTTTTTTTTTTTTTTGGTCCAGTTTTTCGTATGTATTCTAGCTAGCGTACGAAGAAGAAAGGAATATAGTGATGTGTACTCGTATTTTTGCTTGGGTCAAACTTGACAACGTGACTTAGGTGTATATACAATATTGGGTTAGTTTATCTTGTTTAGTTTCAACACCACTTAACCTAACACGTATAAGGTCAAAGTTTTGGTGCCTCAACCGTCTCAATTGCTGCCTAGTTGCCAATAAACACTAGTGATAGAGGTGTCATATGGGCTATAGAAATGTTCATTAAATTCTTCAACTTCAACCAACAAAAGGAATTTTTATAATAACTTTAATAATGTAAAATAAATTCACTCTTAAAATAATTTAAATCATTTTCAGACAGTTTTCCAATTCATAAGCAACCTAACAAATAAAATAATTTAAACTTAGAGAACAAATTAATAAGATGTACTTTTGTTCTCCACGTGATGTTGTCAACTTCAAAATTTATAGTTGAATAACATCCTATAAAATAAAGAGAGTTATGACACAACCTAAGAAAATCAAAAATAAAAAGAATAGGATTGGGACAAAACCTAGTTAGATTTGTGAACCTAAATTAAACATGTGTCTGGTCTATATAACCAAAACTTTTTTTTAATTACCAGTTATTCAATGAATCTGAAAGAAGATTATTTAACTGGAGCATTTGTTTTTTTATTTTTAAATTGAAATTTTTTGCATGTGTCTTCAGGGGTACGGTATGACAGAGGCAGGCCCAGTACTGTCCATGTCTTTGGGCTTTGCAAAGAACCCATTCCCAACAAGTTCAGGCTCATGTGGCACTGTTGTAAGAAATGCAGAGCTCAAAGTTCTTGACCCTGAAACTGGTCATTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATACGTGGCCAACAAATCATGAAAGGTATGCATTATATAAATGCAATATAACCTTCTTATAAATATTTTTCTTCCTAGTAATTTTCTTTCTTTCATGAAATAATATTTTTTTAATTATTTTCTATTTATAAATTTCAATATTTTAGGATATTTGAATGATGAGAATGCAACAAAAACTACTATTGATGAGGACGGTTGGCTTCATACTGGTGATGTTGGCTATATAGATGACAATGATGAGATTTTCATAGTTGATAGAGTGAAAGAACTCATCAAATTCAAAGGCTTCCAAGTATGTATTTCATTAATTTATGAATACATTTAAATTTACCTCATTAAATAAAATTTATGCTTAATTATTATTTTGTTATGTTAGGTGCCCCCTGCTGAACTTGAAGGTCTTCTTGTAAGTCATCCATCTATTGCAGATGCAGCTGTTGTCCCGTAAGTATCTTAATTAATTTATTTGAATCTTGATAATGTCATTGTTTATATATAAATAATAATTAATCTCTAATGGAACCAAATATTTTAACAGGCAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCCTTTGTGGTAAGATCAAATGGAAATGATCTAACTGAAGAGATTGTAAAGGACTTTATAGCTAAACAGGTAATATAAGCATTGCTATATACATTAATTGTGTTATTTGATACAAAGAAATTAAAATTCTACTTGACTAGAGTGAAAACCCATTATGGTCCCTCACAATTTTCTTACGGCCCAATTCTGTCTCTGACTAAAATAAATTTCAAATTAGTCCATTATAATAGAAAGACCGATTTGTTAAGGACTAAATTGTGTCATCGGAAAATTGTGAGAGACTAAAACGAACCTTCATTCTCATTTGATTGATTAAGATCAACATTTTTAAAAGACTTTGAACTCCAATATTTGACTAAAAGTGGCATGTGGTATTTATTGTGAACAGGTGGTATTTTATAAAAGACTGCACAAAGTATATTTTGTTCATGCAATTCCAAAGTCTCCTGCAGGAAAGATATTGAGGAAAGACCTAAGAGCAAAGCTAGAAAGCTCCACCTAA
Protein sequence

>MS.gene21861.t1

MLSVAPSVDAKQTAEVSTSVSIPKLDNFEDDSLSTQTTHIFKSKLPDIPISNHLPLHTYCFENLSEFADRPCLIVAATGKTYTYAETYLQCRKIAAGLSKLGIQKGDVIMILLQNSAEFVLSFIAASMIGAVATTANPFYTSAEIFKQIKASETKLIITQAMYVDKLRQNDQVGVEFDFKVITTDEPPVNCLHFSVISESNEEDIPVVEIDPEDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMHKFEIGTLLGLIQKHKVTVAMVVPPLVLALAKSPTVAEFDLSSIRLVLSGAAPLGKELEETLHNRIPQAVLGQGYGMTEAGPVLSMSLGFAKNPFPTSSGSCGTVVRNAELKVLDPETGHSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEDGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEIVKDFIAKQVVFYKRLHKVYFVHAIPKSPAGKILRKDLRAKLESST