AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035923

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035923.t1 MTR_5g062320 96.667 780 25 1 1 779 1 780 0.0 1561
MS.gene035923.t1 MTR_5g062370 94.501 782 40 1 1 779 1 782 0.0 1511
MS.gene035923.t1 MTR_5g062430 91.560 782 63 1 1 779 1 782 0.0 1463
MS.gene035923.t1 MTR_5g062650 84.459 785 116 3 1 779 1 785 0.0 1352
MS.gene035923.t1 MTR_3g074060 69.987 773 225 3 8 779 10 776 0.0 1171
MS.gene035923.t1 MTR_5g062370 94.549 587 29 1 1 584 1 587 0.0 1154
MS.gene035923.t1 MTR_5g030860 48.750 800 368 12 1 779 4 782 0.0 776
MS.gene035923.t1 MTR_1g106860 49.933 751 359 12 27 769 18 759 0.0 744
MS.gene035923.t1 MTR_2g008240 48.280 756 362 12 33 779 40 775 0.0 724
MS.gene035923.t1 MTR_2g034720 46.803 782 383 14 1 777 1 754 0.0 724
MS.gene035923.t1 MTR_1g087240 46.530 778 386 10 5 777 3 755 0.0 724
MS.gene035923.t1 MTR_7g109390 47.278 753 370 12 33 777 28 761 0.0 723
MS.gene035923.t1 MTR_4g094285 46.360 783 392 13 5 779 12 774 0.0 710
MS.gene035923.t1 MTR_6g028090 27.886 667 354 29 35 635 16 621 5.23e-42 163
MS.gene035923.t1 MTR_6g028120 28.006 657 346 30 45 635 7 602 1.75e-41 161
MS.gene035923.t1 MTR_2g030000 27.778 630 330 26 54 610 37 614 5.10e-40 157
MS.gene035923.t1 MTR_6g028100 27.202 647 346 28 54 635 35 621 2.53e-39 155
MS.gene035923.t1 MTR_3g079750 27.015 670 364 29 37 641 18 627 2.72e-39 155
MS.gene035923.t1 MTR_3g462820 27.032 603 348 23 47 592 22 589 3.19e-39 154
MS.gene035923.t1 MTR_6g028110 26.488 672 369 28 33 639 15 626 6.61e-39 154
MS.gene035923.t1 MTR_6g028110 26.488 672 369 28 33 639 15 626 1.46e-38 153
MS.gene035923.t1 MTR_7g086030 27.695 668 330 30 47 635 4 597 1.72e-38 152
MS.gene035923.t1 MTR_7g086030 27.695 668 330 30 47 635 29 622 3.10e-38 152
MS.gene035923.t1 MTR_5g069800 25.581 602 355 22 49 592 7 573 3.55e-35 142
MS.gene035923.t1 MTR_5g069740 25.845 592 344 23 54 592 12 561 1.24e-31 131
MS.gene035923.t1 MTR_7g086010 29.539 369 207 18 83 433 119 452 4.06e-24 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035923.t1 AT1G78060 63.479 753 264 7 31 779 22 767 0.0 1011
MS.gene035923.t1 AT5G10560 50.324 771 355 9 31 779 28 792 0.0 790
MS.gene035923.t1 AT3G19620 50.870 747 342 14 33 769 27 758 0.0 754
MS.gene035923.t1 AT5G09730 48.015 781 385 14 4 779 9 773 0.0 726
MS.gene035923.t1 AT5G64570 48.005 777 380 12 12 779 23 784 0.0 724
MS.gene035923.t1 AT1G02640 46.261 789 379 13 1 777 3 758 0.0 718
MS.gene035923.t1 AT5G49360 47.187 782 378 17 6 777 14 770 0.0 701
MS.gene035923.t1 AT5G64570 51.384 578 271 8 12 587 23 592 0.0 601
MS.gene035923.t1 AT5G64570 48.050 641 310 11 147 779 1 626 0.0 594
MS.gene035923.t1 AT5G09700 44.581 489 258 7 297 779 45 526 4.82e-134 408
MS.gene035923.t1 AT3G47040 26.502 649 369 27 47 638 10 607 1.73e-40 158
MS.gene035923.t1 AT3G47000 25.875 657 357 27 47 635 10 604 3.18e-39 154
MS.gene035923.t1 AT5G04885 26.324 623 357 25 53 614 53 634 4.28e-38 152
MS.gene035923.t1 AT5G04885 26.324 623 357 25 53 614 36 617 4.47e-38 152
MS.gene035923.t1 AT5G04885 26.324 623 357 25 53 614 36 617 4.47e-38 152
MS.gene035923.t1 AT3G47010 26.892 621 362 27 47 610 11 596 9.01e-38 150
MS.gene035923.t1 AT3G47040 25.637 667 377 29 47 638 10 632 9.49e-38 150
MS.gene035923.t1 AT3G47050 26.427 613 350 26 43 594 6 578 2.67e-36 145
MS.gene035923.t1 AT3G47010 26.645 623 360 29 47 610 11 595 4.80e-36 145
MS.gene035923.t1 AT5G20950 28.972 428 205 17 57 421 36 427 1.12e-32 135
MS.gene035923.t1 AT5G20950 28.972 428 205 17 57 421 36 427 1.12e-32 135
MS.gene035923.t1 AT5G20950 28.972 428 205 17 57 421 114 505 1.78e-32 135
MS.gene035923.t1 AT3G62710 26.861 618 336 29 59 634 105 648 1.02e-31 132
MS.gene035923.t1 AT5G20940 28.471 425 236 17 57 433 42 446 1.26e-30 128
MS.gene035923.t1 AT3G47000 28.637 433 221 17 47 421 10 412 2.48e-30 125
MS.gene035923.t1 AT3G47040 29.195 435 241 18 47 433 10 425 4.83e-30 124
MS.gene035923.t1 AT3G47010 27.880 434 248 18 47 433 11 426 1.04e-27 117
MS.gene035923.t1 AT3G47000 25.268 467 285 20 191 635 3 427 7.34e-25 108
MS.gene035923.t1 AT3G47010 26.637 443 270 21 193 610 5 417 7.67e-25 108
MS.gene035923.t1 AT3G47050 26.330 376 217 14 43 374 6 365 8.84e-22 99.0

Find 192 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAACTATTGATGATTTAT+TGG 0.145046 5.2:+71640725 None:intergenic
CACCAAACATAAACATATTT+AGG 0.152169 5.2:-71643358 MS.gene035923:CDS
AATAAGTGATTATGTTATTT+TGG 0.156153 5.2:-71640553 MS.gene035923:CDS
TTCTAAGAAGCCTGTTATTT+TGG 0.174390 5.2:-71640430 MS.gene035923:CDS
CTGCCTATGATTTGGAAAAT+TGG 0.179123 5.2:-71643175 MS.gene035923:CDS
GCCAAGAATAATGACAAAAT+TGG 0.214168 5.2:-71640372 MS.gene035923:CDS
TTTGAAGGTGGAAAACTAAT+TGG 0.218848 5.2:-71643236 MS.gene035923:CDS
TTTCCATTTCTACCTTTCTT+TGG 0.223144 5.2:+71639043 None:intergenic
TCAGGTTACTTTACAAGATT+TGG 0.243170 5.2:-71642747 MS.gene035923:intron
TTGATGATTTATTGGCATTA+GGG 0.250324 5.2:+71640733 None:intergenic
AAGCTCAAGGGATGACGTTT+TGG 0.256760 5.2:-71643382 MS.gene035923:CDS
AAACAAGTATCCATATTAAA+AGG 0.276787 5.2:-71640675 MS.gene035923:CDS
ACACTTTACTGCCTATGATT+TGG 0.277559 5.2:-71643183 MS.gene035923:CDS
TCTTGCCCTCTTCCCCATCT+TGG 0.278328 5.2:+71643332 None:intergenic
GTAAATACCCTTGGAGTTAT+AGG 0.279725 5.2:-71640756 MS.gene035923:CDS
ACAAAATTGGAGGCATCATT+TGG 0.281644 5.2:-71640359 MS.gene035923:CDS
ACTGATTCGGTACCAAAGTT+TGG 0.290827 5.2:+71643965 None:intergenic
ATTGATGATTTATTGGCATT+AGG 0.294469 5.2:+71640732 None:intergenic
TGTGCTTACAACCGTGTTAA+TGG 0.296603 5.2:-71642662 MS.gene035923:CDS
TCTTTAGAGCATACTTGATT+TGG 0.301730 5.2:+71640861 None:intergenic
AATTCTGCCATATTGAAGTT+TGG 0.332874 5.2:+71640887 None:intergenic
GGAGGTGGAAAGGGTGAAGT+TGG 0.339877 5.2:-71638977 MS.gene035923:CDS
TACAAACTTGTTTCAGAGTT+AGG 0.340365 5.2:-71639163 MS.gene035923:CDS
AAACTTCAATATGGCAGAAT+TGG 0.347201 5.2:-71640885 MS.gene035923:CDS
CACAAAATTACCAAAATAAC+AGG 0.354358 5.2:+71640420 None:intergenic
CTGATTCGGTACCAAAGTTT+GGG 0.355066 5.2:+71643966 None:intergenic
CCTTTGGTAAATTCAAAGTA+TGG 0.359897 5.2:-71643293 MS.gene035923:CDS
ACATTGGGAATTACAAATAC+TGG 0.364595 5.2:-71639106 MS.gene035923:CDS
CTTCAAGGTGATTCCTTTGA+AGG 0.366164 5.2:-71643251 MS.gene035923:CDS
CGGTGTTTCTTATGTTGGTA+AGG 0.366894 5.2:-71644063 MS.gene035923:CDS
CATGTCCATTTCTGTAACAT+TGG 0.372834 5.2:-71639122 MS.gene035923:CDS
GGCACGGTCGATTTGAGATA+TGG 0.377068 5.2:+71640965 None:intergenic
AAGTAATGGTGATGGAAAAT+TGG 0.378794 5.2:+71644348 None:intergenic
ATCATTTGGGCTGGTTATCC+TGG 0.383440 5.2:-71640345 MS.gene035923:CDS
GCTGGTTATCCTGGTGAAAC+TGG 0.384326 5.2:-71640336 MS.gene035923:CDS
GGTCCAAAGGTCTACGAATT+CGG 0.387773 5.2:-71639301 MS.gene035923:CDS
TTTGACGGAAATGAAGTTGT+AGG 0.388452 5.2:+71639252 None:intergenic
ACAAATACTGGAAGCATGGC+TGG 0.392102 5.2:-71639094 MS.gene035923:CDS
AATTCCCAATGTTACAGAAA+TGG 0.398418 5.2:+71639117 None:intergenic
ACCAAACATAAACATATTTA+GGG 0.398770 5.2:-71643357 MS.gene035923:CDS
AGATTGTAATCTGCACAGTT+TGG 0.398988 5.2:+71642635 None:intergenic
AATCCAACCAAACTTCAATA+TGG 0.399490 5.2:-71640894 MS.gene035923:CDS
TGGTGGAAGGGCTCTGGCTC+AGG 0.399913 5.2:-71640316 MS.gene035923:CDS
TCCCTAAATATGTTTATGTT+TGG 0.400093 5.2:+71643356 None:intergenic
AGGAATAATTTGAGTAGCTT+AGG 0.401616 5.2:+71639272 None:intergenic
CAAACCTAGTCTTATTCTAA+TGG 0.402033 5.2:+71640926 None:intergenic
GCTCTGGCTCAGGTTGTGTT+TGG 0.406314 5.2:-71640306 MS.gene035923:CDS
TAGCCGAATTCGTAGACCTT+TGG 0.407677 5.2:+71639298 None:intergenic
ATAAGACTAGGTTTGTTTGA+TGG 0.411429 5.2:-71640918 MS.gene035923:CDS
ACTCCAAGGGTATTTACTCT+TGG 0.414446 5.2:+71640762 None:intergenic
AACAGCTGGTGAAGATCCTT+TGG 0.418172 5.2:-71643309 MS.gene035923:CDS
AACCCTACCAACTGTTTCAC+TGG 0.418928 5.2:+71639019 None:intergenic
AGGTGGTTATTTGTTGGTTG+TGG 0.420306 5.2:-71638888 MS.gene035923:CDS
ATAAGTTTCTGTTGCTTACC+AGG 0.420753 5.2:+71640471 None:intergenic
TGAAACTGGTGGAAGGGCTC+TGG 0.429489 5.2:-71640322 MS.gene035923:CDS
TAAGACTAGGTTTGTTTGAT+GGG 0.430129 5.2:-71640917 MS.gene035923:CDS
CAGCTTCAAGAGCAAGGTCT+AGG 0.436293 5.2:+71640835 None:intergenic
AAGCCAAAGAAAGGTAGAAA+TGG 0.439382 5.2:-71639046 MS.gene035923:CDS
CAAAATTGGAGGCATCATTT+GGG 0.439628 5.2:-71640358 MS.gene035923:CDS
CTCATTCTCATGTCTGTCAT+TGG 0.443342 5.2:+71639373 None:intergenic
TCCTATGTGAGAGGACTTCA+AGG 0.445249 5.2:-71643266 MS.gene035923:CDS
TTTGAGAGTGTGACGGTGGA+AGG 0.447503 5.2:-71638998 MS.gene035923:CDS
TTTCCCTCAAATCATTCTTA+CGG 0.448886 5.2:-71644003 MS.gene035923:CDS
TGAAGAAGGTGGTTATTTGT+TGG 0.451987 5.2:-71638894 MS.gene035923:CDS
GAGGTGGAAAGGGTGAAGTT+GGG 0.452463 5.2:-71638976 MS.gene035923:CDS
GTGTTTGGTGACTATAACCC+TGG 0.452505 5.2:-71640291 MS.gene035923:intron
AGCCAGACACATTATCGTTC+TGG 0.456155 5.2:-71640636 MS.gene035923:CDS
TTGGCAAAAGTAATATCAAC+AGG 0.457189 5.2:+71640390 None:intergenic
ATGTCCATTTCTGTAACATT+GGG 0.459363 5.2:-71639121 MS.gene035923:CDS
AGTTACTGACCTTACTGATT+CGG 0.462510 5.2:+71643952 None:intergenic
GATCCATCATCAGGCTATCC+TGG 0.464763 5.2:-71639346 MS.gene035923:CDS
GCACGGTCGATTTGAGATAT+GGG 0.464880 5.2:+71640966 None:intergenic
TGGCTCTTTGAGTGATGGTA+AGG 0.468209 5.2:+71644201 None:intergenic
ACGGTGGAAGGAGGTGGAAA+GGG 0.469710 5.2:-71638986 MS.gene035923:CDS
TTATTTGTTGGTTGTGGGAG+AGG 0.471909 5.2:-71638882 MS.gene035923:CDS
GGTAAGGTTGAGATTGCAAA+AGG 0.475896 5.2:+71644217 None:intergenic
CTGTTTGTCAAGCCAAAGAA+AGG 0.476513 5.2:-71639055 MS.gene035923:CDS
TTGCACGGTGTTTCTTATGT+TGG 0.479426 5.2:-71644068 MS.gene035923:CDS
CTGCCATATTGAAGTTTGGT+TGG 0.480427 5.2:+71640891 None:intergenic
GAGCCGTGACACAATGTCTT+TGG 0.481669 5.2:+71644181 None:intergenic
AATATGGATACTTGTTTACA+AGG 0.482332 5.2:+71640681 None:intergenic
GTGTTTCCGTCTCTTGACTT+TGG 0.484702 5.2:+71640517 None:intergenic
CATATTTAGGGATCCAAGAT+GGG 0.485529 5.2:-71643345 MS.gene035923:CDS
ACATATTTAGGGATCCAAGA+TGG 0.488212 5.2:-71643346 MS.gene035923:CDS
GGTGGTTATTTGTTGGTTGT+GGG 0.491601 5.2:-71638887 MS.gene035923:CDS
AGGGTATTTACTCTTGGAAG+TGG 0.494590 5.2:+71640768 None:intergenic
GTTGTATGAATGAAGGTGAT+TGG 0.496646 5.2:-71643437 MS.gene035923:intron
ATCCAGAACGATAATGTGTC+TGG 0.501407 5.2:+71640634 None:intergenic
GGTGTTTCTTATGTTGGTAA+GGG 0.501707 5.2:-71644062 MS.gene035923:CDS
AGGTACATTAGTCGGTGAAT+CGG 0.504246 5.2:+71644283 None:intergenic
GTCTTTGGCTCTTTGAGTGA+TGG 0.506861 5.2:+71644196 None:intergenic
GACGGTGGAAGGAGGTGGAA+AGG 0.507657 5.2:-71638987 MS.gene035923:CDS
ATGAGAGCTGATCCATCATC+AGG 0.511303 5.2:-71639355 MS.gene035923:CDS
TTGGAGATGTCACAGGAGTA+AGG 0.511401 5.2:+71644260 None:intergenic
CGGTATACCGAGTCGAGGAA+TGG 0.513844 5.2:+71644115 None:intergenic
GGGATCCAAGATGGGGAAGA+GGG 0.516839 5.2:-71643337 MS.gene035923:CDS
ACATCAGCTACAACATCCTC+TGG 0.517153 5.2:+71642053 None:intergenic
GAAGGTGGAAAACTAATTGG+AGG 0.518493 5.2:-71643233 MS.gene035923:CDS
TGGTTGACTGGTTGATGTGA+AGG 0.523221 5.2:+71639221 None:intergenic
CTACCAGGATAGCCTGATGA+TGG 0.523266 5.2:+71639343 None:intergenic
TTCTTGCAGCTTCAAGAGCA+AGG 0.526483 5.2:+71640829 None:intergenic
GGTTACTTTACAAGATTTGG+CGG 0.526554 5.2:-71642744 MS.gene035923:CDS
AGGGATCCAAGATGGGGAAG+AGG 0.527272 5.2:-71643338 MS.gene035923:CDS
TATCGTTCTGGATGTACTGA+TGG 0.530389 5.2:-71640624 MS.gene035923:CDS
AAGAATAATGACAAAATTGG+AGG 0.530513 5.2:-71640369 MS.gene035923:CDS
GCTAGAGGAGTGTACAATGC+TGG 0.534160 5.2:-71643407 MS.gene035923:CDS
CAAGGTGATTCCTTTGAAGG+TGG 0.534545 5.2:-71643248 MS.gene035923:CDS
ATACCGAGTCGAGGAATGGC+AGG 0.534851 5.2:+71644119 None:intergenic
ATTGGAGGCATCATTTGGGC+TGG 0.536363 5.2:-71640354 MS.gene035923:CDS
CAGCCGTAAGAATGATTTGA+GGG 0.537119 5.2:+71644000 None:intergenic
TCTTGGAAGTGGGAGAATTG+AGG 0.537861 5.2:+71640779 None:intergenic
AAGGTCTACGAATTCGGCTA+TGG 0.539382 5.2:-71639295 MS.gene035923:CDS
CCTTTGGACCTGTGTAGAAA+CGG 0.540578 5.2:+71639314 None:intergenic
AATGGTAAATAGATTGTGTA+GGG 0.541798 5.2:+71640944 None:intergenic
ATCCAGTGAAACAGTTGGTA+GGG 0.542668 5.2:-71639021 MS.gene035923:CDS
TTTGGAAAATTGGAAGGGTG+TGG 0.544458 5.2:-71643165 MS.gene035923:CDS
CTATGATTTGGAAAATTGGA+AGG 0.547121 5.2:-71643171 MS.gene035923:CDS
GGTGTCAAGGTGGTTGAAGA+AGG 0.548262 5.2:-71638908 MS.gene035923:CDS
TACAATGCTGGACAAGCTCA+AGG 0.548478 5.2:-71643395 MS.gene035923:CDS
CTTCCAAGAGTAAATACCCT+TGG 0.550798 5.2:-71640765 MS.gene035923:CDS
GGCTTGACAAACAGCAACAC+AGG 0.552059 5.2:+71639064 None:intergenic
CAATGTTACAGAAATGGACA+TGG 0.553553 5.2:+71639123 None:intergenic
AGAGTTCATTTAGAGTTACC+TGG 0.556126 5.2:-71640489 MS.gene035923:CDS
GCCCTTCCACCAGTTTCACC+AGG 0.557917 5.2:+71640327 None:intergenic
TAAGGTTGAGATTGCAAAAG+GGG 0.559131 5.2:+71644219 None:intergenic
GGTAAGGGGATAATATTGAA+TGG 0.560036 5.2:-71644047 MS.gene035923:CDS
AATCCAGTGAAACAGTTGGT+AGG 0.561271 5.2:-71639022 MS.gene035923:CDS
GTGTTTCTTATGTTGGTAAG+GGG 0.562805 5.2:-71644061 MS.gene035923:CDS
TCGGTATACCGAGTTATCAA+TGG 0.563582 5.2:-71644103 MS.gene035923:CDS
TCATTCCACCATTGATAACT+CGG 0.565942 5.2:+71644095 None:intergenic
CCATACTTTGAATTTACCAA+AGG 0.567024 5.2:+71643293 None:intergenic
TAATGGTAAATAGATTGTGT+AGG 0.569087 5.2:+71640943 None:intergenic
GTGAATCGGCATGAACGAGT+TGG 0.570073 5.2:+71644297 None:intergenic
ATCCTGGTGAAACTGGTGGA+AGG 0.570539 5.2:-71640329 MS.gene035923:CDS
GCTCTTGAAGCTGCAAGAAG+TGG 0.571675 5.2:-71640825 MS.gene035923:CDS
CAAATACTGGAAGCATGGCT+GGG 0.573487 5.2:-71639093 MS.gene035923:CDS
ACTTTGGTACCGAATCAGTA+AGG 0.574437 5.2:-71643961 MS.gene035923:intron
GAGAGTGTGACGGTGGAAGG+AGG 0.575492 5.2:-71638995 MS.gene035923:CDS
AGTGTGACGGTGGAAGGAGG+TGG 0.578214 5.2:-71638992 MS.gene035923:CDS
GTAAGGTTGAGATTGCAAAA+GGG 0.580172 5.2:+71644218 None:intergenic
AGAACGATAATGTGTCTGGC+TGG 0.580712 5.2:+71640638 None:intergenic
AGCAAATGAGAGTGGTGTCA+AGG 0.581128 5.2:-71638921 MS.gene035923:CDS
CATTGTGTCACGGCTCACAT+TGG 0.582035 5.2:-71644174 MS.gene035923:CDS
GTATCGAATGAGTGGTTGAC+TGG 0.582453 5.2:+71639209 None:intergenic
AATTACAAATACTGGAAGCA+TGG 0.582605 5.2:-71639098 MS.gene035923:CDS
GCAGCCGTAAGAATGATTTG+AGG 0.582798 5.2:+71643999 None:intergenic
GTAGCTGATGTACTTCGAGC+TGG 0.583158 5.2:-71642041 MS.gene035923:intron
TCCTGGTGAAACTGGTGGAA+GGG 0.585464 5.2:-71640328 MS.gene035923:CDS
ACTCTGAAACAAGTTTGTAA+CGG 0.590668 5.2:+71639167 None:intergenic
GAGTAAGGAGGTACATTAGT+CGG 0.591459 5.2:+71644275 None:intergenic
CATTAGGGCCTATAACTCCA+AGG 0.594911 5.2:+71640748 None:intergenic
GGAAGAGGGCAAGAAACAGC+TGG 0.595728 5.2:-71643323 MS.gene035923:CDS
GGGTATTTACTCTTGGAAGT+GGG 0.605290 5.2:+71640769 None:intergenic
TAGAAACGGTAGGTTCTACC+AGG 0.607742 5.2:+71639328 None:intergenic
CCGTTTCTACACAGGTCCAA+AGG 0.609130 5.2:-71639314 MS.gene035923:CDS
TCAGGGATGGATGTAGAGTG+TGG 0.611464 5.2:-71641038 MS.gene035923:intron
AGAACCTACCGTTTCTACAC+AGG 0.612051 5.2:-71639322 MS.gene035923:CDS
GGTTATCCTGGTGAAACTGG+TGG 0.612813 5.2:-71640333 MS.gene035923:CDS
ACGTGGGTTGGAGATGTCAC+AGG 0.612949 5.2:+71644253 None:intergenic
GTCAAGGTGGTTGAAGAAGG+TGG 0.614362 5.2:-71638905 MS.gene035923:CDS
TGGAAATCCAGTGAAACAGT+TGG 0.620701 5.2:-71639026 MS.gene035923:CDS
GTATACCGAGTTATCAATGG+TGG 0.620903 5.2:-71644100 MS.gene035923:CDS
TTCTATGCAACTATGAAACG+AGG 0.622993 5.2:+71642709 None:intergenic
TTAAATCAGGTATATTGCGT+CGG 0.624270 5.2:-71642126 MS.gene035923:intron
GCTCCTGCCATTCCTCGACT+CGG 0.625159 5.2:-71644122 MS.gene035923:CDS
TGGACCTGTGTAGAAACGGT+AGG 0.625209 5.2:+71639318 None:intergenic
TTTACCATTAGAATAAGACT+AGG 0.630221 5.2:-71640930 MS.gene035923:CDS
TATGGTGTTTCCTATGTGAG+AGG 0.630566 5.2:-71643275 MS.gene035923:CDS
TAAATAGATTGTGTAGGGCA+CGG 0.632594 5.2:+71640949 None:intergenic
CGATACATATATGAGAAACA+AGG 0.634724 5.2:-71642089 MS.gene035923:CDS
GGTAGGGTTTGAGAGTGTGA+CGG 0.635292 5.2:-71639005 MS.gene035923:CDS
AGGGTTTGAGAGTGTGACGG+TGG 0.638866 5.2:-71639002 MS.gene035923:CDS
ATTGGACCAAAGTCAAGAGA+CGG 0.639353 5.2:-71640523 MS.gene035923:CDS
ATAGAACAAGGACGATCTAG+TGG 0.641432 5.2:-71642692 MS.gene035923:CDS
TTTCATAGTTGCATAGAACA+AGG 0.642706 5.2:-71642704 MS.gene035923:CDS
CTTAGTAGAGCAAATGAGAG+TGG 0.648348 5.2:-71638929 MS.gene035923:CDS
GTGATTGGAACTGAGGCTAG+AGG 0.649624 5.2:-71643422 MS.gene035923:CDS
ATTAGGGCCTATAACTCCAA+GGG 0.662705 5.2:+71640749 None:intergenic
GAGCCAAAGACATTGTGTCA+CGG 0.665561 5.2:-71644184 MS.gene035923:CDS
AATGAAGGTGATTGGAACTG+AGG 0.666042 5.2:-71643429 MS.gene035923:intron
AGTTTGGAACTCCATTAACA+CGG 0.668614 5.2:+71642651 None:intergenic
TATGATTTGGAAAATTGGAA+GGG 0.673969 5.2:-71643170 MS.gene035923:CDS
ACAATGCTGGACAAGCTCAA+GGG 0.675868 5.2:-71643394 MS.gene035923:CDS
ACCTTGAAGTCCTCTCACAT+AGG 0.676616 5.2:+71643265 None:intergenic
ATATTTAGGGATCCAAGATG+GGG 0.682736 5.2:-71643344 MS.gene035923:CDS
TCTATGCAACTATGAAACGA+GGG 0.684013 5.2:+71642710 None:intergenic
GAGGTAGACTACCAATGACA+TGG 0.687132 5.2:-71639420 MS.gene035923:CDS
TGGTGGAATGAAGCTTTGCA+CGG 0.702092 5.2:-71644083 MS.gene035923:CDS
ATGGATACTTGTTTACAAGG+AGG 0.708927 5.2:+71640684 None:intergenic
TAACTCGGTATACCGAGTCG+AGG 0.711678 5.2:+71644110 None:intergenic
GAGATGTCACAGGAGTAAGG+AGG 0.715685 5.2:+71644263 None:intergenic
AAATGAGAGTGGTGTCAAGG+TGG 0.736902 5.2:-71638918 MS.gene035923:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGAATTATTATGTGTTTA+CGG - chr5.2:71641235-71641254 MS.gene035923:intron 15.0%
!! ATATACTAGAAAAAGTTATT+TGG + chr5.2:71643704-71643723 None:intergenic 15.0%
!! TATACTAGAAAAAGTTATTT+GGG + chr5.2:71643703-71643722 None:intergenic 15.0%
!! TATTGTTTAATAGAAGATAT+TGG + chr5.2:71640867-71640886 None:intergenic 15.0%
!!! AATAAGTGATTATGTTATTT+TGG - chr5.2:71642653-71642672 MS.gene035923:CDS 15.0%
!!! TTCATCATAATTTTTAGTAT+AGG - chr5.2:71641600-71641619 MS.gene035923:intron 15.0%
!!! TTTCTCATTAGTATTTTTAT+CGG - chr5.2:71641392-71641411 MS.gene035923:intron 15.0%
!!! TTTCTTAATTTTACTCAATT+TGG - chr5.2:71641834-71641853 MS.gene035923:intron 15.0%
!! AAAACTAAAAGACAAATTTG+AGG + chr5.2:71640218-71640237 None:intergenic 20.0%
!! AAACAAAATACAAAAGAAGA+AGG + chr5.2:71641753-71641772 None:intergenic 20.0%
!! AAACAAGTATCCATATTAAA+AGG - chr5.2:71642531-71642550 MS.gene035923:intron 20.0%
!! AAATGAGAGAATATTTAGTT+AGG - chr5.2:71643245-71643264 MS.gene035923:CDS 20.0%
!! ACAAATAAACATACATAATG+TGG - chr5.2:71642964-71642983 MS.gene035923:intron 20.0%
!! ACATAATTCAGTGTAATTAT+AGG + chr5.2:71639363-71639382 None:intergenic 20.0%
!! ACCAAACATAAACATATTTA+GGG - chr5.2:71639849-71639868 MS.gene035923:intron 20.0%
!! ATACTAGAAAAAGTTATTTG+GGG + chr5.2:71643702-71643721 None:intergenic 20.0%
!! ATGGATTTGGATTATTAAAA+AGG + chr5.2:71640430-71640449 None:intergenic 20.0%
!! ATTACAATACAAACAAAACT+CGG + chr5.2:71639724-71639743 None:intergenic 20.0%
!! CTTCAAAAAAATCCAAATAT+GGG + chr5.2:71639481-71639500 None:intergenic 20.0%
!! GTTCTTATAAATTACAAAAG+TGG - chr5.2:71640685-71640704 MS.gene035923:CDS 20.0%
!! TACATAATGTGGTAAAAAAA+TGG - chr5.2:71642975-71642994 MS.gene035923:intron 20.0%
!! TATGTATGTTTATTTGTTCA+TGG + chr5.2:71642961-71642980 None:intergenic 20.0%
!! TCTTCAAAAAAATCCAAATA+TGG + chr5.2:71639482-71639501 None:intergenic 20.0%
!! TGAAGTTTATACATGTTTAA+AGG + chr5.2:71643200-71643219 None:intergenic 20.0%
!! TTTGACATAAACTAAAACTA+AGG + chr5.2:71641899-71641918 None:intergenic 20.0%
!!! AAGAACTATTGATGATTTAT+TGG + chr5.2:71642484-71642503 None:intergenic 20.0%
!!! AGTAAGATAACGATATTTTA+AGG + chr5.2:71641345-71641364 None:intergenic 20.0%
!!! AGTATTTTTAAAATTGTGGT+TGG - chr5.2:71640157-71640176 MS.gene035923:intron 20.0%
!!! ATAATCAATGTTTTCAATTG+TGG + chr5.2:71643633-71643652 None:intergenic 20.0%
!!! GATTATGTTATTTTGGTTAT+GGG - chr5.2:71642660-71642679 MS.gene035923:CDS 20.0%
!!! GTATTTTGATGAAATCTTTT+GGG + chr5.2:71643814-71643833 None:intergenic 20.0%
!!! GTATTTTTAAAATTGTGGTT+GGG - chr5.2:71640158-71640177 MS.gene035923:intron 20.0%
!!! GTCTAGTATTTTTAAAATTG+TGG - chr5.2:71640153-71640172 MS.gene035923:intron 20.0%
!!! TATTTTATATTGGGAAACAA+GGG - chr5.2:71643290-71643309 MS.gene035923:CDS 20.0%
!!! TATTTTTAAAATTGTGGTTG+GGG - chr5.2:71640159-71640178 MS.gene035923:intron 20.0%
!!! TGATTATGTTATTTTGGTTA+TGG - chr5.2:71642659-71642678 MS.gene035923:CDS 20.0%
!!! TTACAATCTTTTAACCAATA+CGG - chr5.2:71640585-71640604 MS.gene035923:CDS 20.0%
!!! TTATTTTATATTGGGAAACA+AGG - chr5.2:71643289-71643308 MS.gene035923:CDS 20.0%
!!! TTGATTAGTATGAATGATTT+TGG - chr5.2:71641054-71641073 MS.gene035923:intron 20.0%
! AAAAATGAAAGTAATGGTGA+TGG + chr5.2:71638869-71638888 None:intergenic 25.0%
! AAGAATAATGACAAAATTGG+AGG - chr5.2:71642837-71642856 MS.gene035923:intron 25.0%
! AAGTGTGATTATAAAGCTTA+AGG + chr5.2:71641870-71641889 None:intergenic 25.0%
! AATATGGATACTTGTTTACA+AGG + chr5.2:71642528-71642547 None:intergenic 25.0%
! AATGGTAAATAGATTGTGTA+GGG + chr5.2:71642265-71642284 None:intergenic 25.0%
! ACCATATAATTAATCATCGA+AGG + chr5.2:71640118-71640137 None:intergenic 25.0%
! AGAGAAAAGAAAACTTACTT+TGG + chr5.2:71640085-71640104 None:intergenic 25.0%
! AGATTCCAAGAAAATAGTTA+AGG - chr5.2:71643450-71643469 MS.gene035923:intron 25.0%
! AGGAAAAAATGGAATTTCAA+TGG - chr5.2:71640610-71640629 MS.gene035923:CDS 25.0%
! AGTAACCTGAATTATTAGAA+TGG + chr5.2:71640449-71640468 None:intergenic 25.0%
! ATATCAAATTGCTACATACA+TGG + chr5.2:71643573-71643592 None:intergenic 25.0%
! ATTATGTGTTGTATGAATGA+AGG - chr5.2:71639762-71639781 MS.gene035923:intron 25.0%
! ATTTAGTTGTGCTTACTAAA+TGG + chr5.2:71643351-71643370 None:intergenic 25.0%
! CAAAGATGTAACATAATTAG+AGG - chr5.2:71641630-71641649 MS.gene035923:intron 25.0%
! CAAATCATTTAACCCATATT+TGG - chr5.2:71639466-71639485 MS.gene035923:intron 25.0%
! CAAATCCATTCTAATAATTC+AGG - chr5.2:71640441-71640460 MS.gene035923:CDS 25.0%
! CACAAAATTACCAAAATAAC+AGG + chr5.2:71642789-71642808 None:intergenic 25.0%
! CACCAAACATAAACATATTT+AGG - chr5.2:71639848-71639867 MS.gene035923:intron 25.0%
! CTAAACATAGACTAATTCTA+AGG + chr5.2:71641976-71641995 None:intergenic 25.0%
! GAAGAGAAAAATGAAAGTAA+TGG + chr5.2:71638875-71638894 None:intergenic 25.0%
! GGAAAAAATGGAATTTCAAT+GGG - chr5.2:71640611-71640630 MS.gene035923:CDS 25.0%
! GGGATATATACAATGTATTT+CGG + chr5.2:71643681-71643700 None:intergenic 25.0%
! GTTTAATAGAAGATATTGGT+GGG + chr5.2:71640863-71640882 None:intergenic 25.0%
! TAAATCTCAATTACTAGATG+CGG - chr5.2:71643366-71643385 MS.gene035923:CDS 25.0%
! TAATGGTAAATAGATTGTGT+AGG + chr5.2:71642266-71642285 None:intergenic 25.0%
! TACTAGAAAAAGTTATTTGG+GGG + chr5.2:71643701-71643720 None:intergenic 25.0%
! TAGAAAATAGTGTTTGTTTG+CGG + chr5.2:71643548-71643567 None:intergenic 25.0%
! TATACATGTTTAAAGGATCT+TGG + chr5.2:71643193-71643212 None:intergenic 25.0%
! TCCCTAAATATGTTTATGTT+TGG + chr5.2:71639853-71639872 None:intergenic 25.0%
! TCCTTCGATGATTAATTATA+TGG - chr5.2:71640114-71640133 MS.gene035923:intron 25.0%
! TCGTTATCTTACTTTATCAA+TGG - chr5.2:71641352-71641371 MS.gene035923:intron 25.0%
! TGGAAAACATTGTTTCATAA+AGG + chr5.2:71640893-71640912 None:intergenic 25.0%
! TGTTTAATAGAAGATATTGG+TGG + chr5.2:71640864-71640883 None:intergenic 25.0%
! TTACAATACAAACAAAACTC+GGG + chr5.2:71639723-71639742 None:intergenic 25.0%
! TTATATTAAGTCACATGGTT+TGG - chr5.2:71641429-71641448 MS.gene035923:intron 25.0%
! TTCAAATGAATTCTACTACT+GGG - chr5.2:71639645-71639664 MS.gene035923:intron 25.0%
! TTTACCATTAGAATAAGACT+AGG - chr5.2:71642276-71642295 MS.gene035923:intron 25.0%
! TTTAGTTGTGCTTACTAAAT+GGG + chr5.2:71643350-71643369 None:intergenic 25.0%
! TTTCAAATGAATTCTACTAC+TGG - chr5.2:71639644-71639663 MS.gene035923:intron 25.0%
! TTTGCTTATATTAAGTCACA+TGG - chr5.2:71641424-71641443 MS.gene035923:intron 25.0%
!! AATGTTTTCCACTCTATTAA+AGG - chr5.2:71640902-71640921 MS.gene035923:CDS 25.0%
!! AGTAAGTTTTCTTTTCTCTA+TGG - chr5.2:71640086-71640105 MS.gene035923:intron 25.0%
!! AGTGTAAAAGCCTTTTAATA+TGG + chr5.2:71642544-71642563 None:intergenic 25.0%
!! AGTTGAGAAATAGTAGTTTT+AGG + chr5.2:71643730-71643749 None:intergenic 25.0%
!! ATATTTTATCATTGCAATGC+AGG - chr5.2:71643764-71643783 MS.gene035923:intron 25.0%
!! ATGTGGTAAAAAAATGGATT+TGG - chr5.2:71642981-71643000 MS.gene035923:intron 25.0%
!! ATTGATGATTTATTGGCATT+AGG + chr5.2:71642477-71642496 None:intergenic 25.0%
!! CTGAATTATTAGAATGGATT+TGG + chr5.2:71640443-71640462 None:intergenic 25.0%
!! CTTAGAATTAGTCTATGTTT+AGG - chr5.2:71641974-71641993 MS.gene035923:intron 25.0%
!! CTTGTGTATGTTTGAAATTA+TGG + chr5.2:71642092-71642111 None:intergenic 25.0%
!! GTTCTTTTAGCAAACTATTT+TGG - chr5.2:71642498-71642517 MS.gene035923:intron 25.0%
!! TATAACTTGTACCGAAATAA+CGG + chr5.2:71642017-71642036 None:intergenic 25.0%
!! TATGATTTGGAAAATTGGAA+GGG - chr5.2:71640036-71640055 MS.gene035923:intron 25.0%
!! TCCAATTTTGTCATTATTCT+TGG + chr5.2:71642838-71642857 None:intergenic 25.0%
!! TTAACTATTTTCTTGGAATC+TGG + chr5.2:71643451-71643470 None:intergenic 25.0%
!! TTGATGATTTATTGGCATTA+GGG + chr5.2:71642476-71642495 None:intergenic 25.0%
!!! ATTATAATTTTGATGAACCG+TGG - chr5.2:71642116-71642135 MS.gene035923:CDS 25.0%
!!! GGTATTTTGATGAAATCTTT+TGG + chr5.2:71643815-71643834 None:intergenic 25.0%
!!! GTTATTTTGGTAATTTTGTG+TGG - chr5.2:71642789-71642808 MS.gene035923:intron 25.0%
AAAACATATAAAAGGCAACC+CGG - chr5.2:71640797-71640816 MS.gene035923:CDS 30.0%
AAACTTCAATATGGCAGAAT+TGG - chr5.2:71642321-71642340 MS.gene035923:intron 30.0%
AAATTTGAGGACGACATTAT+TGG + chr5.2:71640205-71640224 None:intergenic 30.0%
AACTGTTTCACCAACTAAAT+AGG + chr5.2:71640937-71640956 None:intergenic 30.0%
AAGTCATGATTCAATTTCCA+AGG + chr5.2:71640296-71640315 None:intergenic 30.0%
AATCCAACCAAACTTCAATA+TGG - chr5.2:71642312-71642331 MS.gene035923:intron 30.0%
AATTACAAATACTGGAAGCA+TGG - chr5.2:71644108-71644127 MS.gene035923:CDS 30.0%
AATTCCCAATGTTACAGAAA+TGG + chr5.2:71644092-71644111 None:intergenic 30.0%
AATTCTGCCATATTGAAGTT+TGG + chr5.2:71642322-71642341 None:intergenic 30.0%
ACATTGGGAATTACAAATAC+TGG - chr5.2:71644100-71644119 MS.gene035923:CDS 30.0%
ACGCAATATACCTGATTTAA+CGG + chr5.2:71641080-71641099 None:intergenic 30.0%
AGGAATAATTTGAGTAGCTT+AGG + chr5.2:71643937-71643956 None:intergenic 30.0%
ATGTCCATTTCTGTAACATT+GGG - chr5.2:71644085-71644104 MS.gene035923:CDS 30.0%
ATGTTGTACTACCGTTATTT+CGG - chr5.2:71642003-71642022 MS.gene035923:intron 30.0%
ATTTGGTTGAATTGACTAGA+TGG - chr5.2:71643414-71643433 MS.gene035923:CDS 30.0%
CATGTTTGACAAAATGTTGT+TGG - chr5.2:71639286-71639305 MS.gene035923:CDS 30.0%
CCATACTTTGAATTTACCAA+AGG + chr5.2:71639916-71639935 None:intergenic 30.0%
CCTTTGGTAAATTCAAAGTA+TGG - chr5.2:71639913-71639932 MS.gene035923:intron 30.0%
CGATACATATATGAGAAACA+AGG - chr5.2:71641117-71641136 MS.gene035923:intron 30.0%
GCCAAGAATAATGACAAAAT+TGG - chr5.2:71642834-71642853 MS.gene035923:intron 30.0%
GTTGAAACACTTCTTGAATT+AGG - chr5.2:71639308-71639327 MS.gene035923:CDS 30.0%
TACTTTATCAATGGTCTCAA+TGG - chr5.2:71641361-71641380 MS.gene035923:intron 30.0%
TCTGATTCTGACATAAACAA+AGG + chr5.2:71641206-71641225 None:intergenic 30.0%
TTAAATCAGGTATATTGCGT+CGG - chr5.2:71641080-71641099 MS.gene035923:intron 30.0%
TTATAGAACTAGAGACAAAG+AGG + chr5.2:71641922-71641941 None:intergenic 30.0%
TTCTCAAATTATTAGCGTGT+CGG - chr5.2:71639387-71639406 MS.gene035923:CDS 30.0%
TTGGCAAAAGTAATATCAAC+AGG + chr5.2:71642819-71642838 None:intergenic 30.0%
TTTCATAGTTGCATAGAACA+AGG - chr5.2:71640502-71640521 MS.gene035923:CDS 30.0%
TTTCCATTTCTACCTTTCTT+TGG + chr5.2:71644166-71644185 None:intergenic 30.0%
TTTCCCTCAAATCATTCTTA+CGG - chr5.2:71639203-71639222 MS.gene035923:CDS 30.0%
TTTGAAGGTGGAAAACTAAT+TGG - chr5.2:71639970-71639989 MS.gene035923:intron 30.0%
! ATAAGACTAGGTTTGTTTGA+TGG - chr5.2:71642288-71642307 MS.gene035923:intron 30.0%
! CTACAATTCTAGTATTGAGT+GGG - chr5.2:71639604-71639623 MS.gene035923:intron 30.0%
! CTATGATTTGGAAAATTGGA+AGG - chr5.2:71640035-71640054 MS.gene035923:intron 30.0%
! CTTCCAATTTTCCAAATCAT+AGG + chr5.2:71640037-71640056 None:intergenic 30.0%
! TAAGACTAGGTTTGTTTGAT+GGG - chr5.2:71642289-71642308 MS.gene035923:intron 30.0%
! TACAAACTTGTTTCAGAGTT+AGG - chr5.2:71644043-71644062 MS.gene035923:CDS 30.0%
! TCAGGTTACTTTACAAGATT+TGG - chr5.2:71640459-71640478 MS.gene035923:CDS 30.0%
! TGCGTGATCAAAATTTTTCA+GGG - chr5.2:71642151-71642170 MS.gene035923:intron 30.0%
! TTGCGTGATCAAAATTTTTC+AGG - chr5.2:71642150-71642169 MS.gene035923:intron 30.0%
! TTTTAGTACTTACCCAATCT+CGG - chr5.2:71639540-71639559 MS.gene035923:intron 30.0%
!! AAGTAATGGTGATGGAAAAT+TGG + chr5.2:71638861-71638880 None:intergenic 30.0%
!! ACTCTGAAACAAGTTTGTAA+CGG + chr5.2:71644042-71644061 None:intergenic 30.0%
!! ATTTTGGTAATTTTGTGTGG+TGG - chr5.2:71642792-71642811 MS.gene035923:intron 30.0%
!! CAAACCTAGTCTTATTCTAA+TGG + chr5.2:71642283-71642302 None:intergenic 30.0%
!! TCTTTAGAGCATACTTGATT+TGG + chr5.2:71642348-71642367 None:intergenic 30.0%
!! TTCTAAGAAGCCTGTTATTT+TGG - chr5.2:71642776-71642795 MS.gene035923:intron 30.0%
!!! AATTAGTTTTCCACCTTCAA+AGG + chr5.2:71639971-71639990 None:intergenic 30.0%
!!! TATCACCAACTTTTTTCCAA+TGG + chr5.2:71641548-71641567 None:intergenic 30.0%
!!! TCACTTAGTTGTTTTAGTTC+TGG - chr5.2:71641707-71641726 MS.gene035923:intron 30.0%
!!! TGATCAAAATTTTTCAGGGA+TGG - chr5.2:71642155-71642174 MS.gene035923:intron 30.0%
!!! TGTTATTTTGGTTATGGGAT+TGG - chr5.2:71642665-71642684 MS.gene035923:CDS 30.0%
AAATGAATTCTACTACTGGG+CGG - chr5.2:71639648-71639667 MS.gene035923:intron 35.0%
AAGACAGAAGAAAACTAACC+AGG + chr5.2:71642936-71642955 None:intergenic 35.0%
AAGCCAAAGAAAGGTAGAAA+TGG - chr5.2:71644160-71644179 MS.gene035923:CDS 35.0%
ACACTTTACTGCCTATGATT+TGG - chr5.2:71640023-71640042 MS.gene035923:intron 35.0%
ACATATTTAGGGATCCAAGA+TGG - chr5.2:71639860-71639879 MS.gene035923:intron 35.0%
ACCATTCAATCAAGATTGAG+CGG + chr5.2:71643122-71643141 None:intergenic 35.0%
ACGACATTATTGGTATTGTG+GGG + chr5.2:71640195-71640214 None:intergenic 35.0%
AGACAGAAGAAAACTAACCA+GGG + chr5.2:71642935-71642954 None:intergenic 35.0%
AGATTGTAATCTGCACAGTT+TGG + chr5.2:71640574-71640593 None:intergenic 35.0%
AGTCTCCATTGGAAAAAAGT+TGG - chr5.2:71641540-71641559 MS.gene035923:intron 35.0%
ATATTTAGGGATCCAAGATG+GGG - chr5.2:71639862-71639881 MS.gene035923:intron 35.0%
ATGGATACTTGTTTACAAGG+AGG + chr5.2:71642525-71642544 None:intergenic 35.0%
CAATGTTACAGAAATGGACA+TGG + chr5.2:71644086-71644105 None:intergenic 35.0%
CATATTTAGGGATCCAAGAT+GGG - chr5.2:71639861-71639880 MS.gene035923:intron 35.0%
CATGTCCATTTCTGTAACAT+TGG - chr5.2:71644084-71644103 MS.gene035923:CDS 35.0%
CCACTCAATACTAGAATTGT+AGG + chr5.2:71639606-71639625 None:intergenic 35.0%
GACGACATTATTGGTATTGT+GGG + chr5.2:71640196-71640215 None:intergenic 35.0%
GGTAAGGGGATAATATTGAA+TGG - chr5.2:71639159-71639178 MS.gene035923:CDS 35.0%
GTAAATACCCTTGGAGTTAT+AGG - chr5.2:71642450-71642469 MS.gene035923:intron 35.0%
GTAAGGTTGAGATTGCAAAA+GGG + chr5.2:71638991-71639010 None:intergenic 35.0%
GTTGTATGAATGAAGGTGAT+TGG - chr5.2:71639769-71639788 MS.gene035923:intron 35.0%
TAAATAGATTGTGTAGGGCA+CGG + chr5.2:71642260-71642279 None:intergenic 35.0%
TAAGGTTGAGATTGCAAAAG+GGG + chr5.2:71638990-71639009 None:intergenic 35.0%
TCTATGCAACTATGAAACGA+GGG + chr5.2:71640499-71640518 None:intergenic 35.0%
TCTCAAATTATTAGCGTGTC+GGG - chr5.2:71639388-71639407 MS.gene035923:CDS 35.0%
TGAAGAAGGTGGTTATTTGT+TGG - chr5.2:71644312-71644331 MS.gene035923:CDS 35.0%
TTATCAATGGTCTCAATGGA+AGG - chr5.2:71641365-71641384 MS.gene035923:intron 35.0%
TTCAACCAAATCTCTATCGT+TGG + chr5.2:71643405-71643424 None:intergenic 35.0%
TTCAGTGTAATTATAGGCGT+CGG + chr5.2:71639357-71639376 None:intergenic 35.0%
TTCTATGCAACTATGAAACG+AGG + chr5.2:71640500-71640519 None:intergenic 35.0%
TTGAACCAACGATAGAGATT+TGG - chr5.2:71643397-71643416 MS.gene035923:CDS 35.0%
TTTAGTACTTACCCAATCTC+GGG - chr5.2:71639541-71639560 MS.gene035923:intron 35.0%
TTTGACGGAAATGAAGTTGT+AGG + chr5.2:71643957-71643976 None:intergenic 35.0%
! AATGGCTTGCCTCATATATA+TGG + chr5.2:71641481-71641500 None:intergenic 35.0%
! AGAGTTCATTTAGAGTTACC+TGG - chr5.2:71642717-71642736 MS.gene035923:CDS 35.0%
! AGTTACTGACCTTACTGATT+CGG + chr5.2:71639257-71639276 None:intergenic 35.0%
! AGTTTGGAACTCCATTAACA+CGG + chr5.2:71640558-71640577 None:intergenic 35.0%
! ATAAGTTTCTGTTGCTTACC+AGG + chr5.2:71642738-71642757 None:intergenic 35.0%
! ATCTTTTAACCAATACGGCA+AGG - chr5.2:71640590-71640609 MS.gene035923:CDS 35.0%
! ATGGCTTGCCTCATATATAT+GGG + chr5.2:71641480-71641499 None:intergenic 35.0%
! CCTACAATTCTAGTATTGAG+TGG - chr5.2:71639603-71639622 MS.gene035923:intron 35.0%
! CTGCCTATGATTTGGAAAAT+TGG - chr5.2:71640031-71640050 MS.gene035923:intron 35.0%
! CTTCTTTTGATCCCAAACTT+TGG - chr5.2:71639229-71639248 MS.gene035923:CDS 35.0%
! GGTGTTTCTTATGTTGGTAA+GGG - chr5.2:71639144-71639163 MS.gene035923:CDS 35.0%
! GGTTACTTTACAAGATTTGG+CGG - chr5.2:71640462-71640481 MS.gene035923:CDS 35.0%
! GTGTTTCTTATGTTGGTAAG+GGG - chr5.2:71639145-71639164 MS.gene035923:CDS 35.0%
! TCATTCCACCATTGATAACT+CGG + chr5.2:71639114-71639133 None:intergenic 35.0%
! TGCGACCTTAACTATTTTCT+TGG + chr5.2:71643458-71643477 None:intergenic 35.0%
! TTATGTCGTTGATGAATCCT+TGG - chr5.2:71640276-71640295 MS.gene035923:intron 35.0%
! TTTTAGCAACTTCAACTGCT+CGG + chr5.2:71642635-71642654 None:intergenic 35.0%
! TTTTATCATTGCAATGCAGG+AGG - chr5.2:71643767-71643786 MS.gene035923:intron 35.0%
! TTTTCCAATGGAGACTATGA+TGG + chr5.2:71641536-71641555 None:intergenic 35.0%
!! AAATCTCTATCGTTGGTTCA+AGG + chr5.2:71643398-71643417 None:intergenic 35.0%
!! ACAAAATTGGAGGCATCATT+TGG - chr5.2:71642847-71642866 MS.gene035923:intron 35.0%
!! ATGATTTTGGCCGTTAAATC+AGG - chr5.2:71641067-71641086 MS.gene035923:intron 35.0%
!! CAAAATTGGAGGCATCATTT+GGG - chr5.2:71642848-71642867 MS.gene035923:intron 35.0%
!! GATTAGTCTCCTGAAGTATT+CGG - chr5.2:71639674-71639693 MS.gene035923:intron 35.0%
!!! GTGAAGGTTGTTGTTTTTGA+CGG + chr5.2:71643972-71643991 None:intergenic 35.0%
AATCCAGTGAAACAGTTGGT+AGG - chr5.2:71644184-71644203 MS.gene035923:CDS 40.0%
AATGAAACGAAGCACAGACA+CGG + chr5.2:71639446-71639465 None:intergenic 40.0%
AATGAAGGTGATTGGAACTG+AGG - chr5.2:71639777-71639796 MS.gene035923:intron 40.0%
ACCGCTCAATCTTGATTGAA+TGG - chr5.2:71643118-71643137 MS.gene035923:intron 40.0%
ACGCAACATGTAAATTGCCA+CGG + chr5.2:71642136-71642155 None:intergenic 40.0%
AGACTTTGTAGCTGCAATTG+TGG + chr5.2:71643482-71643501 None:intergenic 40.0%
AGGTACATTAGTCGGTGAAT+CGG + chr5.2:71638926-71638945 None:intergenic 40.0%
AGGTTATGCAAAAACACCAG+AGG - chr5.2:71641137-71641156 MS.gene035923:intron 40.0%
ATAGAACAAGGACGATCTAG+TGG - chr5.2:71640514-71640533 MS.gene035923:CDS 40.0%
ATCCAGAACGATAATGTGTC+TGG + chr5.2:71642575-71642594 None:intergenic 40.0%
ATGTCCATCATAGTCTCCAT+TGG - chr5.2:71641529-71641548 MS.gene035923:intron 40.0%
ATTAGGGCCTATAACTCCAA+GGG + chr5.2:71642460-71642479 None:intergenic 40.0%
ATTGGACCAAAGTCAAGAGA+CGG - chr5.2:71642683-71642702 MS.gene035923:CDS 40.0%
CACTCTATTAAAGGTGAGCA+TGG - chr5.2:71640911-71640930 MS.gene035923:CDS 40.0%
CAGCCGTAAGAATGATTTGA+GGG + chr5.2:71639209-71639228 None:intergenic 40.0%
CATGCTCACCTTTAATAGAG+TGG + chr5.2:71640913-71640932 None:intergenic 40.0%
CCAATACGGCAAGGAAAAAA+TGG - chr5.2:71640599-71640618 MS.gene035923:CDS 40.0%
CCATTCTAAGCCATCAATGA+TGG - chr5.2:71641496-71641515 MS.gene035923:intron 40.0%
CGGTGTTTCTTATGTTGGTA+AGG - chr5.2:71639143-71639162 MS.gene035923:CDS 40.0%
CTCAAATTATTAGCGTGTCG+GGG - chr5.2:71639389-71639408 MS.gene035923:CDS 40.0%
CTCATTCTCATGTCTGTCAT+TGG + chr5.2:71643836-71643855 None:intergenic 40.0%
CTGCCATATTGAAGTTTGGT+TGG + chr5.2:71642318-71642337 None:intergenic 40.0%
CTGTTTGTCAAGCCAAAGAA+AGG - chr5.2:71644151-71644170 MS.gene035923:CDS 40.0%
CTTAGTAGAGCAAATGAGAG+TGG - chr5.2:71644277-71644296 MS.gene035923:CDS 40.0%
CTTCAAGGTGATTCCTTTGA+AGG - chr5.2:71639955-71639974 MS.gene035923:intron 40.0%
CTTCCAAGAGTAAATACCCT+TGG - chr5.2:71642441-71642460 MS.gene035923:intron 40.0%
GAAGGTGGAAAACTAATTGG+AGG - chr5.2:71639973-71639992 MS.gene035923:intron 40.0%
GGACGACATTATTGGTATTG+TGG + chr5.2:71640197-71640216 None:intergenic 40.0%
GGGTATTTACTCTTGGAAGT+GGG + chr5.2:71642440-71642459 None:intergenic 40.0%
GGTAAGGTTGAGATTGCAAA+AGG + chr5.2:71638992-71639011 None:intergenic 40.0%
GGTCTCAAACCATATACCAT+CGG + chr5.2:71639572-71639591 None:intergenic 40.0%
GTATACCGAGTTATCAATGG+TGG - chr5.2:71639106-71639125 MS.gene035923:CDS 40.0%
GTGGGGTCTAATGAAAATGT+AGG + chr5.2:71641455-71641474 None:intergenic 40.0%
TAAGCCATCAATGATGGTCA+TGG - chr5.2:71641502-71641521 MS.gene035923:intron 40.0%
TATGGTGTTTCCTATGTGAG+AGG - chr5.2:71639931-71639950 MS.gene035923:intron 40.0%
TCAGGTTACATCTGGAGATT+GGG - chr5.2:71643030-71643049 MS.gene035923:intron 40.0%
TCGGTATACCGAGTTATCAA+TGG - chr5.2:71639103-71639122 MS.gene035923:CDS 40.0%
TGGAAATCCAGTGAAACAGT+TGG - chr5.2:71644180-71644199 MS.gene035923:CDS 40.0%
TGTGCTTACAACCGTGTTAA+TGG - chr5.2:71640544-71640563 MS.gene035923:CDS 40.0%
TTAGTACTTACCCAATCTCG+GGG - chr5.2:71639542-71639561 MS.gene035923:intron 40.0%
TTGCACGGTGTTTCTTATGT+TGG - chr5.2:71639138-71639157 MS.gene035923:CDS 40.0%
TTTGGAAAATTGGAAGGGTG+TGG - chr5.2:71640041-71640060 MS.gene035923:intron 40.0%
! AAGGGGAAGAATTTTGTACG+TGG + chr5.2:71638973-71638992 None:intergenic 40.0%
! ACTTTGGTACCGAATCAGTA+AGG - chr5.2:71639245-71639264 MS.gene035923:CDS 40.0%
! AGGGGAAGAATTTTGTACGT+GGG + chr5.2:71638972-71638991 None:intergenic 40.0%
! AGGGTATTTACTCTTGGAAG+TGG + chr5.2:71642441-71642460 None:intergenic 40.0%
! AGGTGGTTATTTGTTGGTTG+TGG - chr5.2:71644318-71644337 MS.gene035923:CDS 40.0%
! ATCCAGTGAAACAGTTGGTA+GGG - chr5.2:71644185-71644204 MS.gene035923:CDS 40.0%
! CCATCATTGATGGCTTAGAA+TGG + chr5.2:71641499-71641518 None:intergenic 40.0%
! GAAGAATTTTGTACGTGGGT+TGG + chr5.2:71638968-71638987 None:intergenic 40.0%
! GAGTAAGGAGGTACATTAGT+CGG + chr5.2:71638934-71638953 None:intergenic 40.0%
! GGTGGTTATTTGTTGGTTGT+GGG - chr5.2:71644319-71644338 MS.gene035923:CDS 40.0%
! GTATTGAGTGGGTTCATACA+TGG - chr5.2:71639615-71639634 MS.gene035923:intron 40.0%
! TATCGTTCTGGATGTACTGA+TGG - chr5.2:71642582-71642601 MS.gene035923:intron 40.0%
! TGGCTTGCCTCATATATATG+GGG + chr5.2:71641479-71641498 None:intergenic 40.0%
! TGGTATATGGTTTGAGACCT+AGG - chr5.2:71639573-71639592 MS.gene035923:intron 40.0%
! TTATTTGTTGGTTGTGGGAG+AGG - chr5.2:71644324-71644343 MS.gene035923:CDS 40.0%
!! ACTCCAAGGGTATTTACTCT+TGG + chr5.2:71642447-71642466 None:intergenic 40.0%
!! ACTGATTCGGTACCAAAGTT+TGG + chr5.2:71639244-71639263 None:intergenic 40.0%
!! ATGGAGACTATGATGGACAT+TGG + chr5.2:71641529-71641548 None:intergenic 40.0%
!! CTGATTCGGTACCAAAGTTT+GGG + chr5.2:71639243-71639262 None:intergenic 40.0%
!! TCTTTTGGGTACCATGTCAT+TGG + chr5.2:71643800-71643819 None:intergenic 40.0%
!! TGGAGACTATGATGGACATT+GGG + chr5.2:71641528-71641547 None:intergenic 40.0%
!!! CCATTTTTTCCTTGCCGTAT+TGG + chr5.2:71640602-71640621 None:intergenic 40.0%
!!! GTTTTCGAGTATCGAATGAG+TGG + chr5.2:71644008-71644027 None:intergenic 40.0%
AACAGCTGGTGAAGATCCTT+TGG - chr5.2:71639897-71639916 MS.gene035923:intron 45.0%
AACCCTACCAACTGTTTCAC+TGG + chr5.2:71644190-71644209 None:intergenic 45.0%
AAGGTCTACGAATTCGGCTA+TGG - chr5.2:71643911-71643930 MS.gene035923:intron 45.0%
ACAAAACTCGGGTATCTGCT+TGG + chr5.2:71639712-71639731 None:intergenic 45.0%
ACAATGCTGGACAAGCTCAA+GGG - chr5.2:71639812-71639831 MS.gene035923:intron 45.0%
ACATCAGCTACAACATCCTC+TGG + chr5.2:71641156-71641175 None:intergenic 45.0%
ACCTTGAAGTCCTCTCACAT+AGG + chr5.2:71639944-71639963 None:intergenic 45.0%
AGAACCTACCGTTTCTACAC+AGG - chr5.2:71643884-71643903 MS.gene035923:intron 45.0%
AGAACGATAATGTGTCTGGC+TGG + chr5.2:71642571-71642590 None:intergenic 45.0%
AGCCAGACACATTATCGTTC+TGG - chr5.2:71642570-71642589 MS.gene035923:intron 45.0%
ATGAGAGCTGATCCATCATC+AGG - chr5.2:71643851-71643870 MS.gene035923:intron 45.0%
CATTAGGGCCTATAACTCCA+AGG + chr5.2:71642461-71642480 None:intergenic 45.0%
CCTCATATATATGGGGAGTG+GGG + chr5.2:71641472-71641491 None:intergenic 45.0%
CCTTTGGACCTGTGTAGAAA+CGG + chr5.2:71643895-71643914 None:intergenic 45.0%
GAGCCAAAGACATTGTGTCA+CGG - chr5.2:71639022-71639041 MS.gene035923:CDS 45.0%
GAGGTAGACTACCAATGACA+TGG - chr5.2:71643786-71643805 MS.gene035923:intron 45.0%
GCAGCCGTAAGAATGATTTG+AGG + chr5.2:71639210-71639229 None:intergenic 45.0%
GCCTCATATATATGGGGAGT+GGG + chr5.2:71641473-71641492 None:intergenic 45.0%
GGTCCAAAGGTCTACGAATT+CGG - chr5.2:71643905-71643924 MS.gene035923:intron 45.0%
GTATCGAATGAGTGGTTGAC+TGG + chr5.2:71644000-71644019 None:intergenic 45.0%
GTCAGGTTACATCTGGAGAT+TGG - chr5.2:71643029-71643048 MS.gene035923:intron 45.0%
GTGAGCATGGCCTATTTAGT+TGG - chr5.2:71640924-71640943 MS.gene035923:CDS 45.0%
GTGTTTCCGTCTCTTGACTT+TGG + chr5.2:71642692-71642711 None:intergenic 45.0%
TACAATGCTGGACAAGCTCA+AGG - chr5.2:71639811-71639830 MS.gene035923:intron 45.0%
TAGAAACGGTAGGTTCTACC+AGG + chr5.2:71643881-71643900 None:intergenic 45.0%
TAGCCGAATTCGTAGACCTT+TGG + chr5.2:71643911-71643930 None:intergenic 45.0%
TCCTATGTGAGAGGACTTCA+AGG - chr5.2:71639940-71639959 MS.gene035923:intron 45.0%
TCTTGGAAGTGGGAGAATTG+AGG + chr5.2:71642430-71642449 None:intergenic 45.0%
TGCACGCAGTTATGTAGTTG+TGG - chr5.2:71643157-71643176 MS.gene035923:CDS 45.0%
TGCCTCATATATATGGGGAG+TGG + chr5.2:71641474-71641493 None:intergenic 45.0%
TGCTTACTAAATGGGTGCAC+AGG + chr5.2:71643342-71643361 None:intergenic 45.0%
TGGCTCTTTGAGTGATGGTA+AGG + chr5.2:71639008-71639027 None:intergenic 45.0%
TGGTGGAATGAAGCTTTGCA+CGG - chr5.2:71639123-71639142 MS.gene035923:CDS 45.0%
TTCTTGCAGCTTCAAGAGCA+AGG + chr5.2:71642380-71642399 None:intergenic 45.0%
TTGGAGATGTCACAGGAGTA+AGG + chr5.2:71638949-71638968 None:intergenic 45.0%
! AAATGAGAGTGGTGTCAAGG+TGG - chr5.2:71644288-71644307 MS.gene035923:CDS 45.0%
! AAGCTCAAGGGATGACGTTT+TGG - chr5.2:71639824-71639843 MS.gene035923:intron 45.0%
! ACAAATACTGGAAGCATGGC+TGG - chr5.2:71644112-71644131 MS.gene035923:CDS 45.0%
! AGCAAATGAGAGTGGTGTCA+AGG - chr5.2:71644285-71644304 MS.gene035923:CDS 45.0%
! AGCTCAAGGGATGACGTTTT+GGG - chr5.2:71639825-71639844 MS.gene035923:intron 45.0%
! CAAATACTGGAAGCATGGCT+GGG - chr5.2:71644113-71644132 MS.gene035923:CDS 45.0%
! CAAGGTGATTCCTTTGAAGG+TGG - chr5.2:71639958-71639977 MS.gene035923:intron 45.0%
! GTGTTTGGTGACTATAACCC+TGG - chr5.2:71642915-71642934 MS.gene035923:intron 45.0%
! TGGTTGACTGGTTGATGTGA+AGG + chr5.2:71643988-71644007 None:intergenic 45.0%
!! ATCATTTGGGCTGGTTATCC+TGG - chr5.2:71642861-71642880 MS.gene035923:intron 45.0%
!! GCACGGTCGATTTGAGATAT+GGG + chr5.2:71642243-71642262 None:intergenic 45.0%
!! GTAATTATAGGCGTCGGTGT+CGG + chr5.2:71639351-71639370 None:intergenic 45.0%
!! GTCTTTGGCTCTTTGAGTGA+TGG + chr5.2:71639013-71639032 None:intergenic 45.0%
!! TATATTTAAAAACATATAAA+AGG - chr5.2:71640789-71640808 MS.gene035923:CDS 5.0%
!!! TTTATTGTTTATTTTATATT+GGG - chr5.2:71643281-71643300 MS.gene035923:CDS 5.0%
!!! TTTTATTGTTTATTTTATAT+TGG - chr5.2:71643280-71643299 MS.gene035923:CDS 5.0%
ATCCTGGTGAAACTGGTGGA+AGG - chr5.2:71642877-71642896 MS.gene035923:intron 50.0%
CAGCTTCAAGAGCAAGGTCT+AGG + chr5.2:71642374-71642393 None:intergenic 50.0%
CATAGACACCGAACACGACA+AGG + chr5.2:71639422-71639441 None:intergenic 50.0%
CATCGGAAAACCCCGAGATT+GGG + chr5.2:71639555-71639574 None:intergenic 50.0%
CATTGTGTCACGGCTCACAT+TGG - chr5.2:71639032-71639051 MS.gene035923:CDS 50.0%
CCCCACTCCCCATATATATG+AGG - chr5.2:71641469-71641488 MS.gene035923:intron 50.0%
CCGTTTCTACACAGGTCCAA+AGG - chr5.2:71643892-71643911 MS.gene035923:intron 50.0%
CTACCAGGATAGCCTGATGA+TGG + chr5.2:71643866-71643885 None:intergenic 50.0%
CTGACGTGACCGAATACTTC+AGG + chr5.2:71639686-71639705 None:intergenic 50.0%
GAATTGTAGGCCACACTCCT+AGG + chr5.2:71639593-71639612 None:intergenic 50.0%
GAGATGTCACAGGAGTAAGG+AGG + chr5.2:71638946-71638965 None:intergenic 50.0%
GAGCCGTGACACAATGTCTT+TGG + chr5.2:71639028-71639047 None:intergenic 50.0%
GAGGTGGAAAGGGTGAAGTT+GGG - chr5.2:71644230-71644249 MS.gene035923:CDS 50.0%
GATCCATCATCAGGCTATCC+TGG - chr5.2:71643860-71643879 MS.gene035923:intron 50.0%
GCTCTTGAAGCTGCAAGAAG+TGG - chr5.2:71642381-71642400 MS.gene035923:intron 50.0%
GCTGGTTATCCTGGTGAAAC+TGG - chr5.2:71642870-71642889 MS.gene035923:intron 50.0%
GGCTTGACAAACAGCAACAC+AGG + chr5.2:71644145-71644164 None:intergenic 50.0%
GGTGTCAAGGTGGTTGAAGA+AGG - chr5.2:71644298-71644317 MS.gene035923:CDS 50.0%
GGTTACATCTGGAGATTGGG+CGG - chr5.2:71643033-71643052 MS.gene035923:intron 50.0%
GGTTATCCTGGTGAAACTGG+TGG - chr5.2:71642873-71642892 MS.gene035923:intron 50.0%
GTAGCTGATGTACTTCGAGC+TGG - chr5.2:71641165-71641184 MS.gene035923:intron 50.0%
GTCAAGGTGGTTGAAGAAGG+TGG - chr5.2:71644301-71644320 MS.gene035923:CDS 50.0%
GTCAGTGTCCTTGTCGTGTT+CGG - chr5.2:71639411-71639430 MS.gene035923:CDS 50.0%
GTGAATCGGCATGAACGAGT+TGG + chr5.2:71638912-71638931 None:intergenic 50.0%
GTGATTGGAACTGAGGCTAG+AGG - chr5.2:71639784-71639803 MS.gene035923:intron 50.0%
TAACTCGGTATACCGAGTCG+AGG + chr5.2:71639099-71639118 None:intergenic 50.0%
TCAGGGATGGATGTAGAGTG+TGG - chr5.2:71642168-71642187 MS.gene035923:intron 50.0%
TCCTGGTGAAACTGGTGGAA+GGG - chr5.2:71642878-71642897 MS.gene035923:intron 50.0%
TGGACCTGTGTAGAAACGGT+AGG + chr5.2:71643891-71643910 None:intergenic 50.0%
TGGGCCATGACCATCATTGA+TGG + chr5.2:71641509-71641528 None:intergenic 50.0%
! CGGGGTTTTCCGATGGTATA+TGG - chr5.2:71639560-71639579 MS.gene035923:intron 50.0%
! GCTAGAGGAGTGTACAATGC+TGG - chr5.2:71639799-71639818 MS.gene035923:intron 50.0%
! GGTAGGGTTTGAGAGTGTGA+CGG - chr5.2:71644201-71644220 MS.gene035923:CDS 50.0%
! TAGTGTTACTGCACGCAGTC+AGG - chr5.2:71643012-71643031 MS.gene035923:intron 50.0%
! TGGTTTGAGACCTAGGAGTG+TGG - chr5.2:71639580-71639599 MS.gene035923:intron 50.0%
! TTTGAGAGTGTGACGGTGGA+AGG - chr5.2:71644208-71644227 MS.gene035923:CDS 50.0%
!! ATTGGAGGCATCATTTGGGC+TGG - chr5.2:71642852-71642871 MS.gene035923:intron 50.0%
!! GGCACGGTCGATTTGAGATA+TGG + chr5.2:71642244-71642263 None:intergenic 50.0%
ACGGTGGAAGGAGGTGGAAA+GGG - chr5.2:71644220-71644239 MS.gene035923:CDS 55.0%
AGGGATCCAAGATGGGGAAG+AGG - chr5.2:71639868-71639887 MS.gene035923:intron 55.0%
ATACCGAGTCGAGGAATGGC+AGG + chr5.2:71639090-71639109 None:intergenic 55.0%
ATATTGGTGGGACCCCTTCC+CGG + chr5.2:71640851-71640870 None:intergenic 55.0%
CCATCGGAAAACCCCGAGAT+TGG + chr5.2:71639556-71639575 None:intergenic 55.0%
CGGTATACCGAGTCGAGGAA+TGG + chr5.2:71639094-71639113 None:intergenic 55.0%
GCACGCAGTCAGGTTACATC+TGG - chr5.2:71643022-71643041 MS.gene035923:intron 55.0%
GGAAGAGGGCAAGAAACAGC+TGG - chr5.2:71639883-71639902 MS.gene035923:intron 55.0%
GGAGGTGGAAAGGGTGAAGT+TGG - chr5.2:71644229-71644248 MS.gene035923:CDS 55.0%
GGGATCCAAGATGGGGAAGA+GGG - chr5.2:71639869-71639888 MS.gene035923:intron 55.0%
TCTTGCCCTCTTCCCCATCT+TGG + chr5.2:71639877-71639896 None:intergenic 55.0%
TGAAACTGGTGGAAGGGCTC+TGG - chr5.2:71642884-71642903 MS.gene035923:intron 55.0%
! AGGGTTTGAGAGTGTGACGG+TGG - chr5.2:71644204-71644223 MS.gene035923:CDS 55.0%
! CCAATCTCGGGGTTTTCCGA+TGG - chr5.2:71639553-71639572 MS.gene035923:intron 55.0%
! GCTCTGGCTCAGGTTGTGTT+TGG - chr5.2:71642900-71642919 MS.gene035923:intron 55.0%
!! ACGTGGGTTGGAGATGTCAC+AGG + chr5.2:71638956-71638975 None:intergenic 55.0%
ACTGAAGCTCCCGCATACGC+AGG - chr5.2:71640823-71640842 MS.gene035923:CDS 60.0%
AGTGTGACGGTGGAAGGAGG+TGG - chr5.2:71644214-71644233 MS.gene035923:CDS 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr5.2:71640819-71640838 None:intergenic 60.0%
CTGAAGCTCCCGCATACGCA+GGG - chr5.2:71640824-71640843 MS.gene035923:CDS 60.0%
GACGGTGGAAGGAGGTGGAA+AGG - chr5.2:71644219-71644238 MS.gene035923:CDS 60.0%
GCCCTTCCACCAGTTTCACC+AGG + chr5.2:71642882-71642901 None:intergenic 60.0%
GCTCCTGCCATTCCTCGACT+CGG - chr5.2:71639084-71639103 MS.gene035923:CDS 60.0%
! GAGAGTGTGACGGTGGAAGG+AGG - chr5.2:71644211-71644230 MS.gene035923:CDS 60.0%
CATACGCAGGGTCCGGGAAG+GGG - chr5.2:71640836-71640855 MS.gene035923:CDS 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr5.2:71640836-71640855 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr5.2:71640835-71640854 MS.gene035923:CDS 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr5.2:71640818-71640837 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr5.2:71640835-71640854 None:intergenic 65.0%
! TGGTGGAAGGGCTCTGGCTC+AGG - chr5.2:71642890-71642909 MS.gene035923:intron 65.0%
!! GTCGGTGTCGGACACGACAC+AGG + chr5.2:71639339-71639358 None:intergenic 65.0%
CGCATACGCAGGGTCCGGGA+AGG - chr5.2:71640834-71640853 MS.gene035923:CDS 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr5.2:71640830-71640849 MS.gene035923:CDS 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr5.2:71640829-71640848 MS.gene035923:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 71638853 71644375 71638853 ID=MS.gene035923
chr5.2 mRNA 71638853 71644375 71638853 ID=MS.gene035923.t1;Parent=MS.gene035923
chr5.2 exon 71643962 71644375 71643962 ID=MS.gene035923.t1.exon1;Parent=MS.gene035923.t1
chr5.2 CDS 71643962 71644375 71643962 ID=cds.MS.gene035923.t1;Parent=MS.gene035923.t1
chr5.2 exon 71643142 71643444 71643142 ID=MS.gene035923.t1.exon2;Parent=MS.gene035923.t1
chr5.2 CDS 71643142 71643444 71643142 ID=cds.MS.gene035923.t1;Parent=MS.gene035923.t1
chr5.2 exon 71642596 71642765 71642596 ID=MS.gene035923.t1.exon3;Parent=MS.gene035923.t1
chr5.2 CDS 71642596 71642765 71642596 ID=cds.MS.gene035923.t1;Parent=MS.gene035923.t1
chr5.2 exon 71642042 71642139 71642042 ID=MS.gene035923.t1.exon4;Parent=MS.gene035923.t1
chr5.2 CDS 71642042 71642139 71642042 ID=cds.MS.gene035923.t1;Parent=MS.gene035923.t1
chr5.2 exon 71640292 71641056 71640292 ID=MS.gene035923.t1.exon5;Parent=MS.gene035923.t1
chr5.2 CDS 71640292 71641056 71640292 ID=cds.MS.gene035923.t1;Parent=MS.gene035923.t1
chr5.2 exon 71638853 71639442 71638853 ID=MS.gene035923.t1.exon6;Parent=MS.gene035923.t1
chr5.2 CDS 71638853 71639442 71638853 ID=cds.MS.gene035923.t1;Parent=MS.gene035923.t1
Gene Sequence

>MS.gene035923

ATGGGCCAATTTTCCATCACCATTACTTTCATTTTTCTCTTCTTAACTCGCTACAACCAACTCGTTCATGCCGATTCACCGACTAATGTACCTCCTTACTCCTGTGACATCTCCAACCCACGTACAAAATTCTTCCCCTTTTGCAATCTCAACCTTACCATCACTCAAAGAGCCAAAGACATTGTGTCACGGCTCACATTGGATGAGAAAATCTCTCAACTCGTTAACACAGCTCCTGCCATTCCTCGACTCGGTATACCGAGTTATCAATGGTGGAATGAAGCTTTGCACGGTGTTTCTTATGTTGGTAAGGGGATAATATTGAATGGTAGTGTTACAGCTGCAACTAGTTTCCCTCAAATCATTCTTACGGCTGCTTCTTTTGATCCCAAACTTTGGTACCGAATCAGTAAGGTCAGTAACTCTTTTAACACATGTTTGACAAAATGTTGTTGGTTGAAACACTTCTTGAATTAGGCGTGTCCTGTGTCGTGTCCGACACCGACGCCTATAATTACACTGAATTATGTGATTTTCTCAAATTATTAGCGTGTCGGGGTCAGTGTCCTTGTCGTGTTCGGTGTCTATGTCCGTGTCTGTGCTTCGTTTCATTCAAATCATTTAACCCATATTTGGATTTTTTTGAAGATTAAAATTATATTTTTCATTTAGTATTTAGTAAATAAGTTTTAGTACTTACCCAATCTCGGGGTTTTCCGATGGTATATGGTTTGAGACCTAGGAGTGTGGCCTACAATTCTAGTATTGAGTGGGTTCATACATGGTTATGATTTCAAATGAATTCTACTACTGGGCGGTGAGATTAGTCTCCTGAAGTATTCGGTCACGTCAGTCACCAAGCAGATACCCGAGTTTTGTTTGTATTGTAATTTGTAATTTGTAATTATTATTATGTGTTGTATGAATGAAGGTGATTGGAACTGAGGCTAGAGGAGTGTACAATGCTGGACAAGCTCAAGGGATGACGTTTTGGGCACCAAACATAAACATATTTAGGGATCCAAGATGGGGAAGAGGGCAAGAAACAGCTGGTGAAGATCCTTTGGTAAATTCAAAGTATGGTGTTTCCTATGTGAGAGGACTTCAAGGTGATTCCTTTGAAGGTGGAAAACTAATTGGAGGTCGTCTTAAAGCTTCTGCTTGTTGCAAACACTTTACTGCCTATGATTTGGAAAATTGGAAGGGTGTGGATCGTTATGTTTTTGATGCCAAAGTAAGTTTTCTTTTCTCTATGGTATAGTCCTTCGATGATTAATTATATGGTGAACAAATAAGATAAGTCTAGTATTTTTAAAATTGTGGTTGGGGTCTAACACAACCCCACAATACCAATAATGTCGTCCTCAAATTTGTCTTTTAGTTTTGTTTGTTGTGTTGTGCAGACTGCAAAGCATGCTTTGTTTTATGTCGTTGATGAATCCTTGGAAATTGAATCATGACTTGCAAAAGAACAGTAAATTAAATTTTGAAATTCAAAAATGATATGATACTTTTTCTTTAAACTGTTATGCTAATGATTCTTATTCTTATATTCTTCAACTTTTAACTTTTTTCCTTTTTAATAATCCAAATCCATTCTAATAATTCAGGTTACTTTACAAGATTTGGCGGATACGTATCAACCCTCGTTTCATAGTTGCATAGAACAAGGACGATCTAGTGGAATAATGTGTGCTTACAACCGTGTTAATGGAGTTCCAAACTGTGCAGATTACAATCTTTTAACCAATACGGCAAGGAAAAAATGGAATTTCAATGGGTATATATAATTATTTCAATTTTGTTTTGTTAATTCTTTAATCTACTTTTTAGTTCTTATAAATTACAAAAGTGGAAACACAAAATATGTAGTTTTGTAATTTTTTAGATATTTAAAAGTGAGTACAAAAATGTAAATTTTATAAAAATTTAACAATATATTTAAAAACATATAAAAGGCAACCCGGTGCACTGAAGCTCCCGCATACGCAGGGTCCGGGAAGGGGTCCCACCAATATCTTCTATTAAACAATATCTCCTTTATGAAACAATGTTTTCCACTCTATTAAAGGTGAGCATGGCCTATTTAGTTGGTGAAACAGTTTTCAATTCAAACTTTTCAGTTTTCTCTCTTTTTGAAGCTACATATTTATAATGTATGATTCATCAAAATGTGAAATTGAAATTTAATTTTTAATTACTTGATTAGTATGAATGATTTTGGCCGTTAAATCAGGTATATTGCGTCGGATTGTGACGCAGTTCGATACATATATGAGAAACAAGGTTATGCAAAAACACCAGAGGATGTTGTAGCTGATGTACTTCGAGCTGGTATACTTTCACTCTTCCTTTGTTTATGTCAGAATCAGAAGTAGATAAATAGAATTATTATGTGTTTACGGATTCTTATCAAAATTTACTTGAACTTTTATGTGTTTTAGAATTGATTTATAACTCTAAATGAAATCACAGCAATGACAATGTGACCTTAAAATATCGTTATCTTACTTTATCAATGGTCTCAATGGAAGGTACTTTTCTCATTAGTATTTTTATCGGTTTACAATTTTTGCTTATATTAAGTCACATGGTTTGGCCTACATTTTCATTAGACCCCACTCCCCATATATATGAGGCAAGCCATTCTAAGCCATCAATGATGGTCATGGCCCAATGTCCATCATAGTCTCCATTGGAAAAAAGTTGGTGATAATGTAGATTTGTATACAATTTATATGTTTATTTTCATCATAATTTTTAGTATAGGTTGCAGACAAAGATGTAACATAATTAGAGGTATATTAGTAAATAAATAAATAATGAACACAATTAGATAGCATTTTGATTGTCATCACTTAGTTGTTTTAGTTCTGGTTTAGTTAAAGTTGTGACTTCCTTCTTCTTTTGTATTTTGTTTGCAACTGTCTAAGATAAATTAAGATTCATTCATGCACTCTAAAGTTTTATGATTGCATACTTTTCTTAATTTTACTCAATTTGGACATTTACTACCTTAAGCTTTATAATCACACTTTCTTTGCCTTAGTTTTAGTTTATGTCAAACCTCTTTGTCTCTAGTTCTATAATCACTTTAGTTATCTTTATTTTGCAACAGAACCTTAGAATTAGTCTATGTTTAGGAGAATCATGTTGTACTACCGTTATTTCGGTACAAGTTATACTTTAGAACTTTTCAACAAAATCATAGTATCATTGTAATTTTGTCAAACTCGCCATAATTTCAAACATACACAAGTACTATTATAATTTTGATGAACCGTGGCAATTTACATGTTGCGTGATCAAAATTTTTCAGGGATGGATGTAGAGTGTGGTGATTACATGACAAAGCATGCAAAGTCAGCAGTATTACAAAAAAAAATTCCCATATCTCAAATCGACCGTGCCCTACACAATCTATTTACCATTAGAATAAGACTAGGTTTGTTTGATGGGAATCCAACCAAACTTCAATATGGCAGAATTGGTCCAAATCAAGTATGCTCTAAAGAAAACCTAGACCTTGCTCTTGAAGCTGCAAGAAGTGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCACTTCCAAGAGTAAATACCCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCAATAGTTCTTTTAGCAAACTATTTTGGTCCTCCTTGTAAACAAGTATCCATATTAAAAGGCTTTTACACTTATGCCAGCCAGACACATTATCGTTCTGGATGTACTGATGGAGTAAAGTGTGCTTCAGCTGAAATTGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTGGACCAAAGTCAAGAGACGGAAACACTTGATAGAGTTCATTTAGAGTTACCTGGTAAGCAACAGAAACTTATTAACAGTGTTGCTAAAGCTTCTAAGAAGCCTGTTATTTTGGTAATTTTGTGTGGTGGTCCTGTTGATATTACTTTTGCCAAGAATAATGACAAAATTGGAGGCATCATTTGGGCTGGTTATCCTGGTGAAACTGGTGGAAGGGCTCTGGCTCAGGTTGTGTTTGGTGACTATAACCCTGGTTAGTTTTCTTCTGTCTTATCCATGAACAAATAAACATACATAATGTGGTAAAAAAATGGATTTGGATTGTTTGTAGTGTTACTGCACGCAGTCAGGTTACATCTGGAGATTGGGCGGTTCAGATTTCAATGACGATTTTGATTTTTTTTAAAATGTAAAATATCAAGTTTGAAATGTAGACCGCTCAATCTTGATTGAATGGTTCACGTCTTGCTAACTGCACGCAGTTATGTAGTTGTGGCTGCGCATGACCAAGATCCTTTAAACATGTATAAACTTCATAGATTCTGAAAAGTCTTAATTATTAAATGAGAGAATATTTAGTTAGGCAAAAAGAATTTTTTTATTGTTTATTTTATATTGGGAAACAAGGGAAAGAGTCTGAAAAATTAGCTTCGATCCTGTGCACCCATTTAGTAAGCACAACTAAATCTCAATTACTAGATGCGGAATGAACCTTGAACCAACGATAGAGATTTGGTTGAATTGACTAGATGGCAGCAGAGTATCCAGATTCCAAGAAAATAGTTAAGGTCGCAACCACAATTGCAGCTACAAAGTCTTTATGTCATAGTATTTAAAAATTGTCTGCAACTGTGATTGTGACCGCAAACAAACACTATTTTCTATACCATGTATGTAGCAATTTGATATATATTGAACAAATGTTTTCAATGTTACTTAAAAGTGTCCACAATTGAAAACATTGATTATAGTGTTGTATGATTTGTCTTGTTGACCGAAATACATTGTATATATCCCCCAAATAACTTTTTCTAGTATATTTTCCTAAAACTACTATTTCTCAACTAATGTGATGCTTTGATATTTTATCATTGCAATGCAGGAGGTAGACTACCAATGACATGGTACCCAAAAGATTTCATCAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCATCATCAGGCTATCCTGGTAGAACCTACCGTTTCTACACAGGTCCAAAGGTCTACGAATTCGGCTATGGCCTAAGCTACTCAAATTATTCCTACAACTTCATTTCCGTCAAAAACAACAACCTTCACATCAACCAGTCAACCACTCATTCGATACTCGAAAACTCTGAAACAATCCGTTACAAACTTGTTTCAGAGTTAGGCAAAAAAGCATGTAAAACCATGTCCATTTCTGTAACATTGGGAATTACAAATACTGGAAGCATGGCTGGGAAACATCCTGTGTTGCTGTTTGTCAAGCCAAAGAAAGGTAGAAATGGAAATCCAGTGAAACAGTTGGTAGGGTTTGAGAGTGTGACGGTGGAAGGAGGTGGAAAGGGTGAAGTTGGGTTCGAAGTTAGTGTTTGTGAGCATCTTAGTAGAGCAAATGAGAGTGGTGTCAAGGTGGTTGAAGAAGGTGGTTATTTGTTGGTTGTGGGAGAGGAAGAGTACTCAATAAGTATCACTCTTTGA
Protein sequence

>MS.gene035923.t1

MGQFSITITFIFLFLTRYNQLVHADSPTNVPPYSCDISNPRTKFFPFCNLNLTITQRAKDIVSRLTLDEKISQLVNTAPAIPRLGIPSYQWWNEALHGVSYVGKGIILNGSVTAATSFPQIILTAASFDPKLWYRISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGGRLKASACCKHFTAYDLENWKGVDRYVFDAKVTLQDLADTYQPSFHSCIEQGRSSGIMCAYNRVNGVPNCADYNLLTNTARKKWNFNGYIASDCDAVRYIYEKQGYAKTPEDVVADVLRAGMDVECGDYMTKHAKSAVLQKKIPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGRIGPNQVCSKENLDLALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSIVLLANYFGPPCKQVSILKGFYTYASQTHYRSGCTDGVKCASAEIDRAVEVAKISDYVILVMGLDQSQETETLDRVHLELPGKQQKLINSVAKASKKPVILVILCGGPVDITFAKNNDKIGGIIWAGYPGETGGRALAQVVFGDYNPGGRLPMTWYPKDFIKIPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNFISVKNNNLHINQSTTHSILENSETIRYKLVSELGKKACKTMSISVTLGITNTGSMAGKHPVLLFVKPKKGRNGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVVEEGGYLLVVGEEEYSISITL