Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038424.t1 | XP_027187359.1 | 84.8 | 263 | 24 | 2 | 1 | 263 | 1 | 247 | 5.30E-120 | 440.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038424.t1 | Q946Y7 | 67.9 | 212 | 64 | 3 | 1 | 211 | 1 | 209 | 1.1e-73 | 278.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038424.t1 | A0A3Q7X0P4 | 84.8 | 263 | 24 | 2 | 1 | 263 | 1 | 247 | 3.8e-120 | 440.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038424 | MS.gene02663 | PPI |
| MS.gene038424 | MS.gene69311 | PPI |
| MS.gene038424 | MS.gene056096 | PPI |
| MS.gene038424 | MS.gene78212 | PPI |
| MS.gene038424 | MS.gene81965 | PPI |
| MS.gene038424 | MS.gene063476 | PPI |
| MS.gene038424 | MS.gene40807 | PPI |
| MS.gene038424 | MS.gene033077 | PPI |
| MS.gene038424 | MS.gene77217 | PPI |
| MS.gene65117 | MS.gene038424 | PPI |
| MS.gene038424 | MS.gene052932 | PPI |
| MS.gene038424 | MS.gene072972 | PPI |
| MS.gene66057 | MS.gene038424 | PPI |
| MS.gene038424 | MS.gene44168 | PPI |
| MS.gene038424 | MS.gene005292 | PPI |
| MS.gene038424 | MS.gene044431 | PPI |
| MS.gene038424 | MS.gene013657 | PPI |
| MS.gene038424 | MS.gene44169 | PPI |
| MS.gene038424 | MS.gene056094 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038424.t1 | MTR_5g092870 | 99.052 | 211 | 2 | 0 | 1 | 211 | 1 | 211 | 1.90e-153 | 429 |
| MS.gene038424.t1 | MTR_3g052210 | 77.251 | 211 | 44 | 2 | 1 | 211 | 1 | 207 | 4.11e-116 | 333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038424.t1 | AT1G28490 | 67.925 | 212 | 64 | 3 | 1 | 211 | 1 | 209 | 3.98e-100 | 293 |
| MS.gene038424.t1 | AT1G28490 | 68.153 | 157 | 47 | 2 | 55 | 211 | 11 | 164 | 1.05e-69 | 214 |
| MS.gene038424.t1 | AT1G28490 | 68.153 | 157 | 47 | 2 | 55 | 211 | 17 | 170 | 2.40e-69 | 214 |
Find 65 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTTGACAACGTAAAA+TGG | 0.199042 | 5.4:+73483484 | None:intergenic |
| TCTTGGTTGTAAATGCAAAA+AGG | 0.254892 | 5.4:-73478629 | MS.gene038424:CDS |
| TACCTGGGTGCGAGCATTGC+TGG | 0.310121 | 5.4:+73481848 | None:intergenic |
| TGAAGAATACCAAGATAAAA+AGG | 0.311255 | 5.4:+73478670 | None:intergenic |
| GGAAAAGATTCTAGATGAAC+TGG | 0.327556 | 5.4:-73478944 | MS.gene038424:CDS |
| TGATAGAAAGGTGGATGAAT+TGG | 0.340172 | 5.4:-73481952 | MS.gene038424:intron |
| GACGTACTTTGATGAGAATC+TGG | 0.370989 | 5.4:+73481532 | None:intergenic |
| CATTATCCCCAGAGGCATAT+TGG | 0.373000 | 5.4:+73481500 | None:intergenic |
| TAGCATCTAGAGATCCTTCT+TGG | 0.380240 | 5.4:-73481914 | MS.gene038424:CDS |
| TGGGAAAACACTTCTGATAC+TGG | 0.386415 | 5.4:-73482858 | MS.gene038424:CDS |
| GATGATGATATGTGGTTTGC+TGG | 0.410145 | 5.4:-73478706 | MS.gene038424:CDS |
| CATTGCTGGTCCACCTCCTC+CGG | 0.425273 | 5.4:+73481862 | None:intergenic |
| CAATACATGAAGAGCTCCTT+GGG | 0.426328 | 5.4:-73479158 | MS.gene038424:CDS |
| AAGTCTAACCAATATGCCTC+TGG | 0.429106 | 5.4:-73481508 | MS.gene038424:CDS |
| ATGAAGAAGGCCAGTGCAAA+GGG | 0.430950 | 5.4:-73478735 | MS.gene038424:CDS |
| CATCATCTGCCCCTTTGCAC+TGG | 0.444110 | 5.4:+73478725 | None:intergenic |
| AGTTTAAGTGTACAGAGAAT+CGG | 0.466460 | 5.4:-73479195 | MS.gene038424:CDS |
| CAGCAAGAACTTCCTTTGAA+AGG | 0.473857 | 5.4:+73482823 | None:intergenic |
| TTGTGGAAGTATTGAGTGGC+AGG | 0.474925 | 5.4:-73482799 | MS.gene038424:intron |
| AAGGAAGTTCTTGCTGCTTG+TGG | 0.475725 | 5.4:-73482816 | MS.gene038424:CDS |
| CTAGTATAAGTGGGATGCAC+AGG | 0.476219 | 5.4:-73481570 | MS.gene038424:CDS |
| ACAATACATGAAGAGCTCCT+TGG | 0.478003 | 5.4:-73479159 | MS.gene038424:CDS |
| CTAGTCGTTTCTGAATGTCT+TGG | 0.480262 | 5.4:-73478646 | MS.gene038424:CDS |
| ACAACTCATGCTAGTATAAG+TGG | 0.493222 | 5.4:-73481580 | MS.gene038424:CDS |
| ATTAAGAGAACAGTGGAAGC+TGG | 0.496755 | 5.4:-73481619 | MS.gene038424:CDS |
| TACTGCTATTGATAGGCAGC+AGG | 0.501024 | 5.4:-73479238 | MS.gene038424:intron |
| TCATAGAATCAGAATCAGAT+AGG | 0.505091 | 5.4:-73481471 | MS.gene038424:CDS |
| ATGAAGTGGAGATTGAAAAC+CGG | 0.508658 | 5.4:-73481881 | MS.gene038424:CDS |
| GAGAACAGTGGAAGCTGGAA+AGG | 0.519334 | 5.4:-73481614 | MS.gene038424:CDS |
| ACATGAAGAGCTCCTTGGGC+AGG | 0.525155 | 5.4:-73479154 | MS.gene038424:intron |
| AGTCTAACCAATATGCCTCT+GGG | 0.528315 | 5.4:-73481507 | MS.gene038424:CDS |
| AGATTGAAAACCGGAGGAGG+TGG | 0.529877 | 5.4:-73481872 | MS.gene038424:CDS |
| TCGAAAAGCGGAAACTCACT+TGG | 0.531086 | 5.4:+73478881 | None:intergenic |
| TTGGACAAAATCTAGACGAT+TGG | 0.532143 | 5.4:+73478900 | None:intergenic |
| GTACAGAGAATCGGAGGTGT+TGG | 0.534643 | 5.4:-73479186 | MS.gene038424:CDS |
| TCTAGAGATCCTTCTTGGTA+TGG | 0.537717 | 5.4:-73481909 | MS.gene038424:CDS |
| AGATGAACTGGGAAATGAGA+TGG | 0.539156 | 5.4:-73478932 | MS.gene038424:CDS |
| TATTGATAGGCAGCAGGACG+AGG | 0.542113 | 5.4:-73479232 | MS.gene038424:intron |
| AGTGGCAATGGTGATGAAGA+AGG | 0.556318 | 5.4:-73478748 | MS.gene038424:CDS |
| ATTTCAGAAAAGAGTGGCAA+TGG | 0.560428 | 5.4:-73478760 | MS.gene038424:intron |
| AGAACAGTGGAAGCTGGAAA+GGG | 0.568137 | 5.4:-73481613 | MS.gene038424:CDS |
| GATGAAGAAGGCCAGTGCAA+AGG | 0.571528 | 5.4:-73478736 | MS.gene038424:CDS |
| TGGAGATTGAAAACCGGAGG+AGG | 0.573238 | 5.4:-73481875 | MS.gene038424:CDS |
| TTGGTATGGCATTGATGAAG+TGG | 0.577534 | 5.4:-73481895 | MS.gene038424:CDS |
| TAAAATGGATCTTGAGCTGA+GGG | 0.587285 | 5.4:+73483499 | None:intergenic |
| CAAGACATTCAGAAACGACT+AGG | 0.594084 | 5.4:+73478647 | None:intergenic |
| TGAGCATTTGAACCTTTCAA+AGG | 0.596975 | 5.4:-73482835 | MS.gene038424:CDS |
| CTGCTTGTGGAAGTATTGAG+TGG | 0.603126 | 5.4:-73482803 | MS.gene038424:CDS |
| TCATCAATGCCATACCAAGA+AGG | 0.605775 | 5.4:+73481900 | None:intergenic |
| CAGAGAGCAAAATCGAAAAG+CGG | 0.608979 | 5.4:+73478869 | None:intergenic |
| GGATGCACAGGGAATTAATG+AGG | 0.609838 | 5.4:-73481558 | MS.gene038424:CDS |
| GACCAGCAATGCTCGCACCC+AGG | 0.617619 | 5.4:-73481850 | MS.gene038424:intron |
| CAACTCATGCTAGTATAAGT+GGG | 0.625213 | 5.4:-73481579 | MS.gene038424:CDS |
| ATATATCAGCTACCTGCCCA+AGG | 0.637394 | 5.4:+73479142 | None:intergenic |
| TTTATGATTTCAGAAAAGAG+TGG | 0.640500 | 5.4:-73478766 | MS.gene038424:intron |
| TAGTATAAGTGGGATGCACA+GGG | 0.644916 | 5.4:-73481569 | MS.gene038424:CDS |
| GTAAAATGGATCTTGAGCTG+AGG | 0.647163 | 5.4:+73483498 | None:intergenic |
| GTCTAACCAATATGCCTCTG+GGG | 0.647453 | 5.4:-73481506 | MS.gene038424:CDS |
| AAGTGGAGATTGAAAACCGG+AGG | 0.652309 | 5.4:-73481878 | MS.gene038424:CDS |
| GAAAAGATTCTAGATGAACT+GGG | 0.658756 | 5.4:-73478943 | MS.gene038424:CDS |
| GGGCAGATGATGATGATATG+TGG | 0.673837 | 5.4:-73478714 | MS.gene038424:CDS |
| TTAAGTGTACAGAGAATCGG+AGG | 0.688868 | 5.4:-73479192 | MS.gene038424:CDS |
| GCACACAATTAAGAGAACAG+TGG | 0.717353 | 5.4:-73481626 | MS.gene038424:CDS |
| TGAAGAAGGCCAGTGCAAAG+GGG | 0.733851 | 5.4:-73478734 | MS.gene038424:CDS |
| GAAATCATCATTATCCCCAG+AGG | 0.750638 | 5.4:+73481492 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5.4:73480865-73480884 | MS.gene038424:intron | 10.0% |
| !! | ATATTTGTAAATATCATTAT+TGG | - | chr5.4:73479628-73479647 | MS.gene038424:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5.4:73480864-73480883 | MS.gene038424:intron | 10.0% |
| !! | TTCATTATCAATTATTATTT+GGG | - | chr5.4:73479150-73479169 | MS.gene038424:intron | 10.0% |
| !!! | TATAATATTTTCATAGTTTA+GGG | + | chr5.4:73479827-73479846 | None:intergenic | 10.0% |
| !!! | TTATAATATTTTCATAGTTT+AGG | + | chr5.4:73479828-73479847 | None:intergenic | 10.0% |
| !! | AAAGTAGAATATATTGTATT+GGG | - | chr5.4:73480889-73480908 | MS.gene038424:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5.4:73480866-73480885 | MS.gene038424:intron | 15.0% |
| !! | AGTAACTTTAACATAAATAT+AGG | - | chr5.4:73481333-73481352 | MS.gene038424:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5.4:73480930-73480949 | MS.gene038424:intron | 15.0% |
| !! | CTTCATTATCAATTATTATT+TGG | - | chr5.4:73479149-73479168 | MS.gene038424:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5.4:73480929-73480948 | MS.gene038424:intron | 15.0% |
| !!! | ATTTTATGGTTTTTTTTATG+TGG | - | chr5.4:73479187-73479206 | MS.gene038424:CDS | 15.0% |
| !!! | CAAATAATAATTGATAATGA+AGG | + | chr5.4:73479151-73479170 | None:intergenic | 15.0% |
| !!! | TTGGTTTTAAAAGTTAAATT+TGG | - | chr5.4:73481390-73481409 | MS.gene038424:intron | 15.0% |
| !! | AAACATTATAACTGAAATAG+TGG | - | chr5.4:73481248-73481267 | MS.gene038424:intron | 20.0% |
| !! | AAATATGTTTGGGTAAAATA+CGG | - | chr5.4:73481418-73481437 | MS.gene038424:intron | 20.0% |
| !! | AACAAATGTTGTTCATTAAT+AGG | - | chr5.4:73480452-73480471 | MS.gene038424:intron | 20.0% |
| !! | AATACAATGTTCAAGTATTT+AGG | - | chr5.4:73481361-73481380 | MS.gene038424:intron | 20.0% |
| !! | AATCAGAAAATGTATTTATG+TGG | + | chr5.4:73481495-73481514 | None:intergenic | 20.0% |
| !! | ATACTATATAAGATGAAGAA+AGG | + | chr5.4:73480687-73480706 | None:intergenic | 20.0% |
| !! | ATGGTTTATTCAAAATAAGA+AGG | - | chr5.4:73479930-73479949 | MS.gene038424:intron | 20.0% |
| !! | ATGTACACAAATTCAATTTA+AGG | + | chr5.4:73480727-73480746 | None:intergenic | 20.0% |
| !! | ATTTGGAAACAAAATATGTT+TGG | - | chr5.4:73481407-73481426 | MS.gene038424:intron | 20.0% |
| !! | CATCAATAAAAATAAGAACT+GGG | + | chr5.4:73479072-73479091 | None:intergenic | 20.0% |
| !! | CATCAATAAAAATAGGAATT+GGG | + | chr5.4:73478814-73478833 | None:intergenic | 20.0% |
| !! | GAAAGTAGAATATATTGTAT+TGG | - | chr5.4:73480888-73480907 | MS.gene038424:intron | 20.0% |
| !! | TACATTGCATCAATAAAAAT+AGG | + | chr5.4:73478821-73478840 | None:intergenic | 20.0% |
| !! | TACTATATAAGATGAAGAAA+GGG | + | chr5.4:73480686-73480705 | None:intergenic | 20.0% |
| !! | TATATAATGAAAAAGCAACT+GGG | + | chr5.4:73482385-73482404 | None:intergenic | 20.0% |
| !! | TGGTTTATTCAAAATAAGAA+GGG | - | chr5.4:73479931-73479950 | MS.gene038424:intron | 20.0% |
| !! | TTCTTTAGCAAGAAAATTTA+AGG | - | chr5.4:73479568-73479587 | MS.gene038424:intron | 20.0% |
| !! | TTTGGAAACAAAATATGTTT+GGG | - | chr5.4:73481408-73481427 | MS.gene038424:intron | 20.0% |
| !!! | AAATGTATTTATGTGGTTTT+TGG | + | chr5.4:73481488-73481507 | None:intergenic | 20.0% |
| !!! | AAATTTGCATTTTTTCTTCA+TGG | - | chr5.4:73478697-73478716 | MS.gene038424:CDS | 20.0% |
| !!! | AATGGAAAACTTTATTTTCT+TGG | + | chr5.4:73480401-73480420 | None:intergenic | 20.0% |
| !!! | AATTGTTTTACTTTGTTTGT+GGG | - | chr5.4:73482457-73482476 | MS.gene038424:intron | 20.0% |
| !!! | ATTAACTTCACTTCTTTTTT+TGG | + | chr5.4:73482659-73482678 | None:intergenic | 20.0% |
| !!! | CAATCTTGAAAAAGTTTTAA+GGG | - | chr5.4:73481459-73481478 | MS.gene038424:CDS | 20.0% |
| !!! | CTTAAAACTTTTTCAAGATT+GGG | + | chr5.4:73481460-73481479 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5.4:73480999-73481018 | MS.gene038424:intron | 20.0% |
| !!! | GTGTTAATTTTTTGATAGAA+AGG | - | chr5.4:73480138-73480157 | MS.gene038424:intron | 20.0% |
| !!! | TAATTGTTTTACTTTGTTTG+TGG | - | chr5.4:73482456-73482475 | MS.gene038424:intron | 20.0% |
| !!! | TGTGATTGATATTGATTTTA+TGG | - | chr5.4:73479173-73479192 | MS.gene038424:CDS | 20.0% |
| !!! | TTAATTTTTTGATAGAAAGG+TGG | - | chr5.4:73480141-73480160 | MS.gene038424:intron | 20.0% |
| !!! | TTGATTGATGATAGAAAATT+GGG | - | chr5.4:73482431-73482450 | MS.gene038424:intron | 20.0% |
| !!! | TTTAGAATTTCAAAAGTTTG+AGG | + | chr5.4:73482154-73482173 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTTGGTTACAAA+AGG | + | chr5.4:73480391-73480410 | None:intergenic | 20.0% |
| !!! | TTTGATTGATGATAGAAAAT+TGG | - | chr5.4:73482430-73482449 | MS.gene038424:intron | 20.0% |
| ! | AAAATACATTGACCAAATTG+TGG | + | chr5.4:73479360-73479379 | None:intergenic | 25.0% |
| ! | AAAGCAAAAAGATAGAACAA+AGG | + | chr5.4:73482511-73482530 | None:intergenic | 25.0% |
| ! | AATATCAGGGACTAAATTAA+TGG | - | chr5.4:73479897-73479916 | MS.gene038424:intron | 25.0% |
| ! | AATTAATGGTTTCTGATTGA+TGG | - | chr5.4:73479911-73479930 | MS.gene038424:intron | 25.0% |
| ! | AATTCAATACACAATCAGAT+TGG | + | chr5.4:73478754-73478773 | None:intergenic | 25.0% |
| ! | ACAATTTATTGCAAGTACAA+AGG | + | chr5.4:73481109-73481128 | None:intergenic | 25.0% |
| ! | ACGAAGTTTCAAATACTAAA+GGG | + | chr5.4:73479856-73479875 | None:intergenic | 25.0% |
| ! | AGATAAAAAGGAAAATGAAC+AGG | + | chr5.4:73483423-73483442 | None:intergenic | 25.0% |
| ! | AGTAAAATAACTTCTGAACA+TGG | + | chr5.4:73479536-73479555 | None:intergenic | 25.0% |
| ! | ATTATAAAACTGACAACTTG+TGG | + | chr5.4:73482836-73482855 | None:intergenic | 25.0% |
| ! | CAACATTAAAACAATTAGCA+CGG | + | chr5.4:73481203-73481222 | None:intergenic | 25.0% |
| ! | CATCAACAAAAATAGGAATT+GGG | + | chr5.4:73478970-73478989 | None:intergenic | 25.0% |
| ! | CATCAATAAAAATAAGAGCT+GGG | + | chr5.4:73478918-73478937 | None:intergenic | 25.0% |
| ! | CCTATAGAAGATAAGAAAAT+CGG | - | chr5.4:73481286-73481305 | MS.gene038424:intron | 25.0% |
| ! | CTATAGAAGATAAGAAAATC+GGG | - | chr5.4:73481287-73481306 | MS.gene038424:intron | 25.0% |
| ! | CTATATAATGAAAAAGCAAC+TGG | + | chr5.4:73482386-73482405 | None:intergenic | 25.0% |
| ! | GATAAAAAGGAAAATGAACA+GGG | + | chr5.4:73483422-73483441 | None:intergenic | 25.0% |
| ! | GATACAATCAAAGAAAAACA+AGG | + | chr5.4:73479751-73479770 | None:intergenic | 25.0% |
| ! | GCATCAATAAAAATAAGAAC+TGG | + | chr5.4:73479073-73479092 | None:intergenic | 25.0% |
| ! | GCATCAATAAAAATAGGAAT+TGG | + | chr5.4:73478815-73478834 | None:intergenic | 25.0% |
| ! | GTAAAATAACTTCTGAACAT+GGG | + | chr5.4:73479535-73479554 | None:intergenic | 25.0% |
| ! | TACACAAATTCAATTTAAGG+TGG | + | chr5.4:73480724-73480743 | None:intergenic | 25.0% |
| ! | TCATCAATAAAAATAAGAGC+TGG | + | chr5.4:73478919-73478938 | None:intergenic | 25.0% |
| ! | TGAAGAATACCAAGATAAAA+AGG | + | chr5.4:73483435-73483454 | None:intergenic | 25.0% |
| ! | TGATATTTACTGCTATTGAT+AGG | - | chr5.4:73482857-73482876 | MS.gene038424:CDS | 25.0% |
| ! | TGGAAAAGTTTGTAAAAAAG+AGG | + | chr5.4:73482255-73482274 | None:intergenic | 25.0% |
| ! | TTTATGATTTCAGAAAAGAG+TGG | - | chr5.4:73483336-73483355 | MS.gene038424:intron | 25.0% |
| ! | TTTATTCAAAATAAGAAGGG+TGG | - | chr5.4:73479934-73479953 | MS.gene038424:intron | 25.0% |
| ! | TTTATTTATTCCTCCAACAT+TGG | - | chr5.4:73479394-73479413 | MS.gene038424:intron | 25.0% |
| !! | ACACAAATTCAATTTAAGGT+GGG | + | chr5.4:73480723-73480742 | None:intergenic | 25.0% |
| !! | ACTAATTTGTATACCAATGT+TGG | + | chr5.4:73479410-73479429 | None:intergenic | 25.0% |
| !! | CCAATCTTGAAAAAGTTTTA+AGG | - | chr5.4:73481458-73481477 | MS.gene038424:CDS | 25.0% |
| !! | GCAATCTAATTTTCATCAAT+GGG | - | chr5.4:73479225-73479244 | MS.gene038424:CDS | 25.0% |
| !! | GTTCATTTTCCTTTTTATCT+TGG | - | chr5.4:73483423-73483442 | MS.gene038424:intron | 25.0% |
| !! | TGCAATCTAATTTTCATCAA+TGG | - | chr5.4:73479224-73479243 | MS.gene038424:CDS | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5.4:73480976-73480995 | MS.gene038424:intron | 25.0% |
| !! | TTTAGTATTTGAAACTTCGT+CGG | - | chr5.4:73479856-73479875 | MS.gene038424:intron | 25.0% |
| !! | TTTGTTGAGATATAGCTTTT+GGG | - | chr5.4:73481921-73481940 | MS.gene038424:CDS | 25.0% |
| !! | TTTTGTTGAGATATAGCTTT+TGG | - | chr5.4:73481920-73481939 | MS.gene038424:CDS | 25.0% |
| !!! | ATGCAAAGTTTTGATATTTG+AGG | - | chr5.4:73479042-73479061 | MS.gene038424:intron | 25.0% |
| !!! | ATTGTTTTACTTTGTTTGTG+GGG | - | chr5.4:73482458-73482477 | MS.gene038424:intron | 25.0% |
| !!! | CCTTAAAACTTTTTCAAGAT+TGG | + | chr5.4:73481461-73481480 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5.4:73480998-73481017 | MS.gene038424:intron | 25.0% |
| !!! | TACAAAAAAGTGTCCATAAT+TGG | + | chr5.4:73480767-73480786 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5.4:73480977-73480996 | MS.gene038424:intron | 25.0% |
| AAGAAAAAATCAACGCAAAC+AGG | + | chr5.4:73481874-73481893 | None:intergenic | 30.0% | |
| AAGAAGTGAAGTTAATAGAG+TGG | - | chr5.4:73482663-73482682 | MS.gene038424:intron | 30.0% | |
| AATAAGAAGGGTGGTAAAAA+TGG | - | chr5.4:73479943-73479962 | MS.gene038424:intron | 30.0% | |
| AATCAAAGAAAAACAAGGCT+GGG | + | chr5.4:73479746-73479765 | None:intergenic | 30.0% | |
| AATCTCTCAGCAATAAAATC+AGG | + | chr5.4:73483102-73483121 | None:intergenic | 30.0% | |
| AATTTGTATACCAATGTTGG+AGG | + | chr5.4:73479407-73479426 | None:intergenic | 30.0% | |
| ACAATGTTCAAGTATTTAGG+TGG | - | chr5.4:73481364-73481383 | MS.gene038424:intron | 30.0% | |
| ACACAACAAAAATATGCAGA+AGG | + | chr5.4:73481965-73481984 | None:intergenic | 30.0% | |
| ACCTATGTCAAACTTTAACA+AGG | - | chr5.4:73480282-73480301 | MS.gene038424:intron | 30.0% | |
| AGAAAAAATCAACGCAAACA+GGG | + | chr5.4:73481873-73481892 | None:intergenic | 30.0% | |
| AGTTATTAAACACGCACTTA+AGG | - | chr5.4:73479460-73479479 | MS.gene038424:intron | 30.0% | |
| AGTTTAAGTGTACAGAGAAT+CGG | - | chr5.4:73482907-73482926 | MS.gene038424:intron | 30.0% | |
| ATCAACAAAAAAAGGGAACT+GGG | + | chr5.4:73478866-73478885 | None:intergenic | 30.0% | |
| CAAAATCATGCAGAGATAAT+TGG | + | chr5.4:73482275-73482294 | None:intergenic | 30.0% | |
| CTTCTGTTGAAAAAACTTGA+AGG | + | chr5.4:73483057-73483076 | None:intergenic | 30.0% | |
| CTTGGTTGTAAATGCAAAAA+GGG | - | chr5.4:73483474-73483493 | MS.gene038424:CDS | 30.0% | |
| GAAAAGATTCTAGATGAACT+GGG | - | chr5.4:73483159-73483178 | MS.gene038424:intron | 30.0% | |
| GAAAGGAAATCTAATATCTG+TGG | + | chr5.4:73480369-73480388 | None:intergenic | 30.0% | |
| GACGAAGTTTCAAATACTAA+AGG | + | chr5.4:73479857-73479876 | None:intergenic | 30.0% | |
| GCATCAACAAAAATAGGAAT+TGG | + | chr5.4:73478971-73478990 | None:intergenic | 30.0% | |
| GCATTGCATCAACAAAAAAA+GGG | + | chr5.4:73478873-73478892 | None:intergenic | 30.0% | |
| GCTGGTAATAAAGATATGAA+TGG | - | chr5.4:73483267-73483286 | MS.gene038424:intron | 30.0% | |
| GGAAAGAATAGTATAAACTC+TGG | - | chr5.4:73481308-73481327 | MS.gene038424:intron | 30.0% | |
| GTGATATCAAACTCCAATTA+TGG | - | chr5.4:73480751-73480770 | MS.gene038424:intron | 30.0% | |
| TAAATGAACAGCTGTAGATT+AGG | + | chr5.4:73480337-73480356 | None:intergenic | 30.0% | |
| TCATAGAATCAGAATCAGAT+AGG | - | chr5.4:73480631-73480650 | MS.gene038424:intron | 30.0% | |
| TCCCTAACATCTTAATATCA+GGG | - | chr5.4:73479884-73479903 | MS.gene038424:intron | 30.0% | |
| TCCCTGATATTAAGATGTTA+GGG | + | chr5.4:73479888-73479907 | None:intergenic | 30.0% | |
| TCTTCTTTGACAACGTAAAA+TGG | + | chr5.4:73478621-73478640 | None:intergenic | 30.0% | |
| TCTTGGTTGTAAATGCAAAA+AGG | - | chr5.4:73483473-73483492 | MS.gene038424:CDS | 30.0% | |
| TGAGATGGAAAATATTCTCT+TGG | - | chr5.4:73480787-73480806 | MS.gene038424:intron | 30.0% | |
| TGCAATGCATCAACAAAAAT+AGG | + | chr5.4:73478977-73478996 | None:intergenic | 30.0% | |
| TGCATTGCATCAACAAAAAA+AGG | + | chr5.4:73478874-73478893 | None:intergenic | 30.0% | |
| TGCATTGCATCAACAAAAAT+GGG | + | chr5.4:73479027-73479046 | None:intergenic | 30.0% | |
| TTAACATGTGTGATAAAGAG+AGG | + | chr5.4:73480054-73480073 | None:intergenic | 30.0% | |
| TTCTAACAATTGCGAAATGA+AGG | + | chr5.4:73478675-73478694 | None:intergenic | 30.0% | |
| TTGCATTGCATCAACAAAAA+TGG | + | chr5.4:73478875-73478894 | None:intergenic | 30.0% | |
| TTTCTTGGTTACAAAAGGAA+AGG | + | chr5.4:73480386-73480405 | None:intergenic | 30.0% | |
| ! | AACTGTTTTGCATTACAACA+AGG | + | chr5.4:73481994-73482013 | None:intergenic | 30.0% |
| ! | ATCTTTTGTCTTCTCAAACT+TGG | + | chr5.4:73483502-73483521 | None:intergenic | 30.0% |
| ! | CATAATGGAAGCCTTAATTA+GGG | + | chr5.4:73482066-73482085 | None:intergenic | 30.0% |
| ! | CCGATTTTCTTATCTTCTAT+AGG | + | chr5.4:73481289-73481308 | None:intergenic | 30.0% |
| ! | TCAAGTATTTAGGTGGTTTT+TGG | - | chr5.4:73481371-73481390 | MS.gene038424:intron | 30.0% |
| ! | TCATAATGGAAGCCTTAATT+AGG | + | chr5.4:73482067-73482086 | None:intergenic | 30.0% |
| ! | TTGTTGAGATATAGCTTTTG+GGG | - | chr5.4:73481922-73481941 | MS.gene038424:CDS | 30.0% |
| ! | TTTTATGTGGCAAGATTGAT+AGG | - | chr5.4:73479200-73479219 | MS.gene038424:CDS | 30.0% |
| !! | CTCTCTGATTTTAATATTGC+TGG | - | chr5.4:73483249-73483268 | MS.gene038424:intron | 30.0% |
| !! | TGACATAGGTTATTTTACCT+GGG | + | chr5.4:73480272-73480291 | None:intergenic | 30.0% |
| !! | TGCATATTTTTGTTGTGTGT+GGG | - | chr5.4:73481967-73481986 | MS.gene038424:intron | 30.0% |
| !! | TTGACATAGGTTATTTTACC+TGG | + | chr5.4:73480273-73480292 | None:intergenic | 30.0% |
| !!! | TGCGTTGATTTTTTCTTACT+TGG | - | chr5.4:73481877-73481896 | MS.gene038424:CDS | 30.0% |
| AAAGAACATCCATTCCTAGA+AGG | + | chr5.4:73482806-73482825 | None:intergenic | 35.0% | |
| AACTAACAAATCCCAGTTCA+TGG | + | chr5.4:73479444-73479463 | None:intergenic | 35.0% | |
| ACAACTCATGCTAGTATAAG+TGG | - | chr5.4:73480522-73480541 | MS.gene038424:intron | 35.0% | |
| ACTTAAGGTATGTCTGAGTT+TGG | - | chr5.4:73479475-73479494 | MS.gene038424:intron | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr5.4:73481012-73481031 | MS.gene038424:intron | 35.0% | |
| AGACTGAGAAACTGTATTGA+AGG | + | chr5.4:73481818-73481837 | None:intergenic | 35.0% | |
| AGCATTGCTAATATTTGACG+TGG | - | chr5.4:73480073-73480092 | MS.gene038424:intron | 35.0% | |
| AGTACAAAGGATCTTACATC+TGG | + | chr5.4:73481096-73481115 | None:intergenic | 35.0% | |
| ATCAAAGAAAAACAAGGCTG+GGG | + | chr5.4:73479745-73479764 | None:intergenic | 35.0% | |
| ATGAAGTGGAGATTGAAAAC+CGG | - | chr5.4:73480221-73480240 | MS.gene038424:intron | 35.0% | |
| ATGGAGTCTAGTGAAAATGT+TGG | - | chr5.4:73479962-73479981 | MS.gene038424:intron | 35.0% | |
| ATTTCAGAAAAGAGTGGCAA+TGG | - | chr5.4:73483342-73483361 | MS.gene038424:intron | 35.0% | |
| CAACTCATGCTAGTATAAGT+GGG | - | chr5.4:73480523-73480542 | MS.gene038424:intron | 35.0% | |
| CAATCAAAGAAAAACAAGGC+TGG | + | chr5.4:73479747-73479766 | None:intergenic | 35.0% | |
| CAGCAGATAAAGAAAAGGAA+TGG | + | chr5.4:73480419-73480438 | None:intergenic | 35.0% | |
| CATAGTTACAGATCAGAACT+GGG | + | chr5.4:73479126-73479145 | None:intergenic | 35.0% | |
| CATCAACAAAAAAAGGGAAC+TGG | + | chr5.4:73478867-73478886 | None:intergenic | 35.0% | |
| CATCAACAAAAATGGGAACT+GGG | + | chr5.4:73479020-73479039 | None:intergenic | 35.0% | |
| CTCTTTACTACACTGTTGAA+TGG | - | chr5.4:73482322-73482341 | MS.gene038424:intron | 35.0% | |
| GGAAAAGATTCTAGATGAAC+TGG | - | chr5.4:73483158-73483177 | MS.gene038424:intron | 35.0% | |
| GTCAAACTTTAACAAGGCTA+AGG | - | chr5.4:73480288-73480307 | MS.gene038424:intron | 35.0% | |
| GTCCCTAACATCTTAATATC+AGG | - | chr5.4:73479883-73479902 | MS.gene038424:intron | 35.0% | |
| GTCCCTGATATTAAGATGTT+AGG | + | chr5.4:73479889-73479908 | None:intergenic | 35.0% | |
| TAAAATGGATCTTGAGCTGA+GGG | + | chr5.4:73478606-73478625 | None:intergenic | 35.0% | |
| TAATGCAAAACAGTTGCTGT+TGG | - | chr5.4:73481999-73482018 | MS.gene038424:intron | 35.0% | |
| TACATTGACCAAATTGTGGA+AGG | + | chr5.4:73479356-73479375 | None:intergenic | 35.0% | |
| TACTGTTGAAAATCAACTGC+AGG | + | chr5.4:73482358-73482377 | None:intergenic | 35.0% | |
| TATAATGCACTCTGCTTAAG+AGG | + | chr5.4:73481060-73481079 | None:intergenic | 35.0% | |
| TATCTCAACAAAAGAAGCCA+CGG | + | chr5.4:73481913-73481932 | None:intergenic | 35.0% | |
| TCATAGTTACAGATCAGAAC+TGG | + | chr5.4:73479127-73479146 | None:intergenic | 35.0% | |
| TCATGCAGCAGATAAAGAAA+AGG | + | chr5.4:73480424-73480443 | None:intergenic | 35.0% | |
| TGAGCATTTGAACCTTTCAA+AGG | - | chr5.4:73479267-73479286 | MS.gene038424:intron | 35.0% | |
| TGATAGAAAGGTGGATGAAT+TGG | - | chr5.4:73480150-73480169 | MS.gene038424:intron | 35.0% | |
| TGGATCATGCAATAAAGTGA+TGG | + | chr5.4:73478734-73478753 | None:intergenic | 35.0% | |
| TGTCAAAATCTTGATGCTTC+AGG | - | chr5.4:73483137-73483156 | MS.gene038424:intron | 35.0% | |
| TTAAGGCTTCCATTATGAGT+TGG | - | chr5.4:73482069-73482088 | MS.gene038424:intron | 35.0% | |
| TTGGACAAAATCTAGACGAT+TGG | + | chr5.4:73483205-73483224 | None:intergenic | 35.0% | |
| ! | AACAATTAGCACGGATTACA+AGG | + | chr5.4:73481194-73481213 | None:intergenic | 35.0% |
| ! | AATGCAAAACAGTTGCTGTT+GGG | - | chr5.4:73482000-73482019 | MS.gene038424:intron | 35.0% |
| ! | GCCTTGTTAAAGTTTGACAT+AGG | + | chr5.4:73480286-73480305 | None:intergenic | 35.0% |
| ! | TGTTGAGATATAGCTTTTGG+GGG | - | chr5.4:73481923-73481942 | MS.gene038424:CDS | 35.0% |
| ! | TTCAAAAGTTTGAGGTGCAT+GGG | + | chr5.4:73482146-73482165 | None:intergenic | 35.0% |
| ! | TTTACTTTGTTTGTGGGGTT+GGG | - | chr5.4:73482463-73482482 | MS.gene038424:intron | 35.0% |
| ! | TTTCAAAAGTTTGAGGTGCA+TGG | + | chr5.4:73482147-73482166 | None:intergenic | 35.0% |
| !! | CTGCATATTTTTGTTGTGTG+TGG | - | chr5.4:73481966-73481985 | MS.gene038424:intron | 35.0% |
| !! | GCTTTGAAAAGTAGTAGACT+AGG | - | chr5.4:73483010-73483029 | MS.gene038424:intron | 35.0% |
| !! | TTTTACTTTGTTTGTGGGGT+TGG | - | chr5.4:73482462-73482481 | MS.gene038424:intron | 35.0% |
| !!! | GGACACTTTTTTGTATGAGA+TGG | - | chr5.4:73480772-73480791 | MS.gene038424:intron | 35.0% |
| AAAACAATGTCGCACAGGAA+CGG | + | chr5.4:73481662-73481681 | None:intergenic | 40.0% | |
| AAAACAGAAAACCACCTACG+AGG | - | chr5.4:73482770-73482789 | MS.gene038424:intron | 40.0% | |
| AAGTCTAACCAATATGCCTC+TGG | - | chr5.4:73480594-73480613 | MS.gene038424:intron | 40.0% | |
| AATCTGTGTGAAATGAGCCA+AGG | + | chr5.4:73480845-73480864 | None:intergenic | 40.0% | |
| ACAATACATGAAGAGCTCCT+TGG | - | chr5.4:73482943-73482962 | MS.gene038424:intron | 40.0% | |
| AGATGAACTGGGAAATGAGA+TGG | - | chr5.4:73483170-73483189 | MS.gene038424:intron | 40.0% | |
| AGCCAAGGGGTCAAATAAAT+TGG | + | chr5.4:73480830-73480849 | None:intergenic | 40.0% | |
| AGGGGTCAAATAAATTGGGA+CGG | + | chr5.4:73480825-73480844 | None:intergenic | 40.0% | |
| AGTCTAACCAATATGCCTCT+GGG | - | chr5.4:73480595-73480614 | MS.gene038424:intron | 40.0% | |
| AGTTTGAACAGGTTGTATCG+CGG | + | chr5.4:73480110-73480129 | None:intergenic | 40.0% | |
| ATCTCAACAAAAGAAGCCAC+GGG | + | chr5.4:73481912-73481931 | None:intergenic | 40.0% | |
| ATCTGTGTGAAATGAGCCAA+GGG | + | chr5.4:73480844-73480863 | None:intergenic | 40.0% | |
| ATTAAGAGAACAGTGGAAGC+TGG | - | chr5.4:73480483-73480502 | MS.gene038424:intron | 40.0% | |
| CAAGACATTCAGAAACGACT+AGG | + | chr5.4:73483458-73483477 | None:intergenic | 40.0% | |
| CAATACATGAAGAGCTCCTT+GGG | - | chr5.4:73482944-73482963 | MS.gene038424:intron | 40.0% | |
| CACATTTCAGCAGTTTGAAC+AGG | + | chr5.4:73480121-73480140 | None:intergenic | 40.0% | |
| CAGAGAGCAAAATCGAAAAG+CGG | + | chr5.4:73483236-73483255 | None:intergenic | 40.0% | |
| CAGCAAGAACTTCCTTTGAA+AGG | + | chr5.4:73479282-73479301 | None:intergenic | 40.0% | |
| CTAGTCGTTTCTGAATGTCT+TGG | - | chr5.4:73483456-73483475 | MS.gene038424:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr5.4:73481013-73481032 | MS.gene038424:intron | 40.0% | |
| GAAATCATCATTATCCCCAG+AGG | + | chr5.4:73480613-73480632 | None:intergenic | 40.0% | |
| GACGTACTTTGATGAGAATC+TGG | + | chr5.4:73480573-73480592 | None:intergenic | 40.0% | |
| GCACACAATTAAGAGAACAG+TGG | - | chr5.4:73480476-73480495 | MS.gene038424:intron | 40.0% | |
| GCATCAACAAAAATGGGAAC+TGG | + | chr5.4:73479021-73479040 | None:intergenic | 40.0% | |
| GCCAAGGGGTCAAATAAATT+GGG | + | chr5.4:73480829-73480848 | None:intergenic | 40.0% | |
| GCGTCAAAAGAGAATACACA+CGG | + | chr5.4:73481560-73481579 | None:intergenic | 40.0% | |
| GGAGTTTAATCTAGATCAGC+CGG | - | chr5.4:73479496-73479515 | MS.gene038424:intron | 40.0% | |
| GTAAAATGGATCTTGAGCTG+AGG | + | chr5.4:73478607-73478626 | None:intergenic | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | + | chr5.4:73480821-73480840 | None:intergenic | 40.0% | |
| GTCCACAATTGTTCCAGTTA+CGG | - | chr5.4:73481626-73481645 | MS.gene038424:CDS | 40.0% | |
| TAGCATCTAGAGATCCTTCT+TGG | - | chr5.4:73480188-73480207 | MS.gene038424:intron | 40.0% | |
| TAGTATAAGTGGGATGCACA+GGG | - | chr5.4:73480533-73480552 | MS.gene038424:intron | 40.0% | |
| TAGTGAAGCCTTCCACAATT+TGG | - | chr5.4:73479345-73479364 | MS.gene038424:intron | 40.0% | |
| TATCATCGCTTCCATGAACT+GGG | - | chr5.4:73479430-73479449 | MS.gene038424:intron | 40.0% | |
| TCAAAAGAGAATACACACGG+TGG | + | chr5.4:73481557-73481576 | None:intergenic | 40.0% | |
| TCATCAATGCCATACCAAGA+AGG | + | chr5.4:73480205-73480224 | None:intergenic | 40.0% | |
| TCCCAATTTATTTGACCCCT+TGG | - | chr5.4:73480825-73480844 | MS.gene038424:intron | 40.0% | |
| TCTAGAGATCCTTCTTGGTA+TGG | - | chr5.4:73480193-73480212 | MS.gene038424:intron | 40.0% | |
| TGCATCTCATGTTTAAGCCA+GGG | - | chr5.4:73482031-73482050 | MS.gene038424:intron | 40.0% | |
| TGGGAAAACACTTCTGATAC+TGG | - | chr5.4:73479244-73479263 | MS.gene038424:intron | 40.0% | |
| TTAAGTGTACAGAGAATCGG+AGG | - | chr5.4:73482910-73482929 | MS.gene038424:intron | 40.0% | |
| TTATCATCGCTTCCATGAAC+TGG | - | chr5.4:73479429-73479448 | MS.gene038424:intron | 40.0% | |
| ! | AAAACAGTTGCTGTTGGGTT+GGG | - | chr5.4:73482005-73482024 | MS.gene038424:intron | 40.0% |
| ! | GATGATGATATGTGGTTTGC+TGG | - | chr5.4:73483396-73483415 | MS.gene038424:intron | 40.0% |
| ! | TCCATTATGAGTTGGCAGTA+GGG | - | chr5.4:73482077-73482096 | MS.gene038424:intron | 40.0% |
| ! | TTCCATTATGAGTTGGCAGT+AGG | - | chr5.4:73482076-73482095 | MS.gene038424:intron | 40.0% |
| ! | TTTTCACCTTTCCTACCACA+GGG | + | chr5.4:73479778-73479797 | None:intergenic | 40.0% |
| ! | TTTTTCACCTTTCCTACCAC+AGG | + | chr5.4:73479779-73479798 | None:intergenic | 40.0% |
| !! | TTGGTATGGCATTGATGAAG+TGG | - | chr5.4:73480207-73480226 | MS.gene038424:intron | 40.0% |
| AAAGAAAAACAAGGCTGGGG+AGG | + | chr5.4:73479742-73479761 | None:intergenic | 45.0% | |
| AAGTGGAGATTGAAAACCGG+AGG | - | chr5.4:73480224-73480243 | MS.gene038424:intron | 45.0% | |
| ACATGACTCAACAGTGTGAC+TGG | - | chr5.4:73482174-73482193 | MS.gene038424:intron | 45.0% | |
| AGAACAGTGGAAGCTGGAAA+GGG | - | chr5.4:73480489-73480508 | MS.gene038424:intron | 45.0% | |
| AGGAACGTTACTCACAGGAA+AGG | + | chr5.4:73481712-73481731 | None:intergenic | 45.0% | |
| ATATATCAGCTACCTGCCCA+AGG | + | chr5.4:73482963-73482982 | None:intergenic | 45.0% | |
| ATCTCATGTTTAAGCCAGGG+AGG | - | chr5.4:73482034-73482053 | MS.gene038424:intron | 45.0% | |
| ATGAAGAAGGCCAGTGCAAA+GGG | - | chr5.4:73483367-73483386 | MS.gene038424:intron | 45.0% | |
| CAATTGTGGACGAACGGAAA+TGG | + | chr5.4:73481617-73481636 | None:intergenic | 45.0% | |
| CATGTGTGATAAAGAGAGGC+TGG | + | chr5.4:73480050-73480069 | None:intergenic | 45.0% | |
| CATTCCTAGAAGGTTCCCTA+AGG | + | chr5.4:73482796-73482815 | None:intergenic | 45.0% | |
| CTAGTATAAGTGGGATGCAC+AGG | - | chr5.4:73480532-73480551 | MS.gene038424:intron | 45.0% | |
| CTGCATCTCATGTTTAAGCC+AGG | - | chr5.4:73482030-73482049 | MS.gene038424:intron | 45.0% | |
| CTGGAACAATTGTGGACGAA+CGG | + | chr5.4:73481623-73481642 | None:intergenic | 45.0% | |
| GGAGGGTGATTCCCTAATTA+AGG | - | chr5.4:73482052-73482071 | MS.gene038424:intron | 45.0% | |
| GGATGCACAGGGAATTAATG+AGG | - | chr5.4:73480544-73480563 | MS.gene038424:intron | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | + | chr5.4:73480822-73480841 | None:intergenic | 45.0% | |
| GGTCGATACAGTGAAGGTTA+CGG | + | chr5.4:73481763-73481782 | None:intergenic | 45.0% | |
| GTAGACTAAGTGTGTGCTTG+TGG | + | chr5.4:73480011-73480030 | None:intergenic | 45.0% | |
| GTCTAACCAATATGCCTCTG+GGG | - | chr5.4:73480596-73480615 | MS.gene038424:intron | 45.0% | |
| GTTTAATCTAGATCAGCCGG+AGG | - | chr5.4:73479499-73479518 | MS.gene038424:intron | 45.0% | |
| TAAGTGTGTGCTTGTGGAGT+TGG | + | chr5.4:73480005-73480024 | None:intergenic | 45.0% | |
| TACTGCTATTGATAGGCAGC+AGG | - | chr5.4:73482864-73482883 | MS.gene038424:CDS | 45.0% | |
| TACTTGGCATTGTTATCCCG+TGG | - | chr5.4:73481893-73481912 | MS.gene038424:CDS | 45.0% | |
| TCAACGCAAACAGGGTAACA+TGG | + | chr5.4:73481865-73481884 | None:intergenic | 45.0% | |
| TCCCTACTGCCAACTCATAA+TGG | + | chr5.4:73482081-73482100 | None:intergenic | 45.0% | |
| TCGAAAAGCGGAAACTCACT+TGG | + | chr5.4:73483224-73483243 | None:intergenic | 45.0% | |
| TCTCATGTTTAAGCCAGGGA+GGG | - | chr5.4:73482035-73482054 | MS.gene038424:intron | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+GGG | + | chr5.4:73480843-73480862 | None:intergenic | 45.0% | |
| TGCCGTAACTGGAACAATTG+TGG | + | chr5.4:73481631-73481650 | None:intergenic | 45.0% | |
| TTGATTGTATCCCTTCCCTG+TGG | - | chr5.4:73479760-73479779 | MS.gene038424:intron | 45.0% | |
| TTGCGCAACATCGTTTCTGT+CGG | - | chr5.4:73481681-73481700 | MS.gene038424:intron | 45.0% | |
| ! | AAACAGTTGCTGTTGGGTTG+GGG | - | chr5.4:73482006-73482025 | MS.gene038424:intron | 45.0% |
| ! | AAGGAAGTTCTTGCTGCTTG+TGG | - | chr5.4:73479286-73479305 | MS.gene038424:intron | 45.0% |
| ! | AGTGGCAATGGTGATGAAGA+AGG | - | chr5.4:73483354-73483373 | MS.gene038424:intron | 45.0% |
| ! | CAAAACAGTTGCTGTTGGGT+TGG | - | chr5.4:73482004-73482023 | MS.gene038424:intron | 45.0% |
| ! | CATTATCCCCAGAGGCATAT+TGG | + | chr5.4:73480605-73480624 | None:intergenic | 45.0% |
| ! | CTTAGGGAACCTTCTAGGAA+TGG | - | chr5.4:73482794-73482813 | MS.gene038424:intron | 45.0% |
| ! | GGGCAGATGATGATGATATG+TGG | - | chr5.4:73483388-73483407 | MS.gene038424:intron | 45.0% |
| ! | TATGAGTTGGCAGTAGGGAA+GGG | - | chr5.4:73482082-73482101 | MS.gene038424:intron | 45.0% |
| ! | TTATGAGTTGGCAGTAGGGA+AGG | - | chr5.4:73482081-73482100 | MS.gene038424:intron | 45.0% |
| !! | CTGCTTGTGGAAGTATTGAG+TGG | - | chr5.4:73479299-73479318 | MS.gene038424:intron | 45.0% |
| !! | TAAAGCGTCGCACACAATGA+AGG | + | chr5.4:73481792-73481811 | None:intergenic | 45.0% |
| !! | TGAGATATAGCTTTTGGGGG+TGG | - | chr5.4:73481926-73481945 | MS.gene038424:CDS | 45.0% |
| !! | TTGTGGAAGTATTGAGTGGC+AGG | - | chr5.4:73479303-73479322 | MS.gene038424:intron | 45.0% |
| !! | TTGTGGGGTTGGGTTTGTTT+TGG | - | chr5.4:73482473-73482492 | MS.gene038424:intron | 45.0% |
| AAAACCACCTACGAGGCCTT+AGG | - | chr5.4:73482777-73482796 | MS.gene038424:intron | 50.0% | |
| AAACCACCTACGAGGCCTTA+GGG | - | chr5.4:73482778-73482797 | MS.gene038424:intron | 50.0% | |
| AATTAGGGAATCACCCTCCC+TGG | + | chr5.4:73482051-73482070 | None:intergenic | 50.0% | |
| ACCTTTCCTACCACAGGGAA+GGG | + | chr5.4:73479773-73479792 | None:intergenic | 50.0% | |
| AGATTGAAAACCGGAGGAGG+TGG | - | chr5.4:73480230-73480249 | MS.gene038424:intron | 50.0% | |
| AGGTTGTATCGCGGCAGAAA+AGG | + | chr5.4:73480101-73480120 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr5.4:73481017-73481036 | MS.gene038424:intron | 50.0% | |
| CATGGGAAGATCACTTCCTC+CGG | + | chr5.4:73479518-73479537 | None:intergenic | 50.0% | |
| GAGAACAGTGGAAGCTGGAA+AGG | - | chr5.4:73480488-73480507 | MS.gene038424:intron | 50.0% | |
| GATGAAGAAGGCCAGTGCAA+AGG | - | chr5.4:73483366-73483385 | MS.gene038424:intron | 50.0% | |
| GCGCAAAAACAATGTCGCAC+AGG | + | chr5.4:73481667-73481686 | None:intergenic | 50.0% | |
| TATTGATAGGCAGCAGGACG+AGG | - | chr5.4:73482870-73482889 | MS.gene038424:CDS | 50.0% | |
| TCGCACACAATGAAGGCTAG+CGG | + | chr5.4:73481785-73481804 | None:intergenic | 50.0% | |
| TGAAGAAGGCCAGTGCAAAG+GGG | - | chr5.4:73483368-73483387 | MS.gene038424:intron | 50.0% | |
| TGGAGATTGAAAACCGGAGG+AGG | - | chr5.4:73480227-73480246 | MS.gene038424:intron | 50.0% | |
| TGTGATAAAGAGAGGCTGGC+AGG | + | chr5.4:73480046-73480065 | None:intergenic | 50.0% | |
| TTGTATCCCTTCCCTGTGGT+AGG | - | chr5.4:73479764-73479783 | MS.gene038424:intron | 50.0% | |
| ! | GTACAGAGAATCGGAGGTGT+TGG | - | chr5.4:73482916-73482935 | MS.gene038424:intron | 50.0% |
| !! | AACAGTTGCTGTTGGGTTGG+GGG | - | chr5.4:73482007-73482026 | MS.gene038424:intron | 50.0% |
| AAAAACAAGGCTGGGGAGGC+GGG | + | chr5.4:73479738-73479757 | None:intergenic | 55.0% | |
| AACAGGGTAACATGGAGCGC+AGG | + | chr5.4:73481857-73481876 | None:intergenic | 55.0% | |
| AACTAGTACTCCCTCCGTCC+CGG | + | chr5.4:73481034-73481053 | None:intergenic | 55.0% | |
| AAGGTTACGGCATCACGAGC+AGG | + | chr5.4:73481750-73481769 | None:intergenic | 55.0% | |
| AAGGTTCCCTAAGGCCTCGT+AGG | + | chr5.4:73482787-73482806 | None:intergenic | 55.0% | |
| ACAATGTCGCACAGGAACGG+TGG | + | chr5.4:73481659-73481678 | None:intergenic | 55.0% | |
| ACATGAAGAGCTCCTTGGGC+AGG | - | chr5.4:73482948-73482967 | MS.gene038424:intron | 55.0% | |
| AGGTTACGGCATCACGAGCA+GGG | + | chr5.4:73481749-73481768 | None:intergenic | 55.0% | |
| CACCTTTCCTACCACAGGGA+AGG | + | chr5.4:73479774-73479793 | None:intergenic | 55.0% | |
| CATCATCTGCCCCTTTGCAC+TGG | + | chr5.4:73483380-73483399 | None:intergenic | 55.0% | |
| CCTGCAGGAACGTTACTCAC+AGG | + | chr5.4:73481717-73481736 | None:intergenic | 55.0% | |
| CCTGTGAGTAACGTTCCTGC+AGG | - | chr5.4:73481714-73481733 | MS.gene038424:intron | 55.0% | |
| CGCACACAATGAAGGCTAGC+GGG | + | chr5.4:73481784-73481803 | None:intergenic | 55.0% | |
| GAAAAACAAGGCTGGGGAGG+CGG | + | chr5.4:73479739-73479758 | None:intergenic | 55.0% | |
| GAGGCCTTAGGGAACCTTCT+AGG | - | chr5.4:73482789-73482808 | MS.gene038424:intron | 55.0% | |
| GGTAACATGGAGCGCAGGAA+GGG | + | chr5.4:73481852-73481871 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5.4:73481021-73481040 | MS.gene038424:intron | 55.0% | |
| GTGGACGAACGGAAATGGCA+GGG | + | chr5.4:73481612-73481631 | None:intergenic | 55.0% | |
| TCCCTTCCCTGTGGTAGGAA+AGG | - | chr5.4:73479769-73479788 | MS.gene038424:intron | 55.0% | |
| TGGACGAACGGAAATGGCAG+GGG | + | chr5.4:73481611-73481630 | None:intergenic | 55.0% | |
| TGTGGACGAACGGAAATGGC+AGG | + | chr5.4:73481613-73481632 | None:intergenic | 55.0% | |
| ! | CTAGCGGGTCGATACAGTGA+AGG | + | chr5.4:73481769-73481788 | None:intergenic | 55.0% |
| AAAACAAGGCTGGGGAGGCG+GGG | + | chr5.4:73479737-73479756 | None:intergenic | 60.0% | |
| ACGAACGGAAATGGCAGGGG+GGG | + | chr5.4:73481608-73481627 | None:intergenic | 60.0% | |
| AGCGCAGGAAGGGAATGGTG+TGG | + | chr5.4:73481842-73481861 | None:intergenic | 60.0% | |
| ATGTCGCACAGGAACGGTGG+CGG | + | chr5.4:73481656-73481675 | None:intergenic | 60.0% | |
| CATGGAGCGCAGGAAGGGAA+TGG | + | chr5.4:73481847-73481866 | None:intergenic | 60.0% | |
| CATTGCTGGTCCACCTCCTC+CGG | + | chr5.4:73480243-73480262 | None:intergenic | 60.0% | |
| GACGAACGGAAATGGCAGGG+GGG | + | chr5.4:73481609-73481628 | None:intergenic | 60.0% | |
| GGACGAACGGAAATGGCAGG+GGG | + | chr5.4:73481610-73481629 | None:intergenic | 60.0% | |
| GGGTAACATGGAGCGCAGGA+AGG | + | chr5.4:73481853-73481872 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5.4:73481020-73481039 | MS.gene038424:intron | 60.0% | |
| GTTCCCTAAGGCCTCGTAGG+TGG | + | chr5.4:73482784-73482803 | None:intergenic | 60.0% | |
| TACGGCATCACGAGCAGGGA+AGG | + | chr5.4:73481745-73481764 | None:intergenic | 60.0% | |
| ! | TACCTGGGTGCGAGCATTGC+TGG | + | chr5.4:73480257-73480276 | None:intergenic | 60.0% |
| GACCAGCAATGCTCGCACCC+AGG | - | chr5.4:73480252-73480271 | MS.gene038424:intron | 65.0% | |
| AAGGCTGGGGAGGCGGGGAA+AGG | + | chr5.4:73479732-73479751 | None:intergenic | 70.0% | |
| GCAGGGAAGGCTGTGCCTGC+AGG | + | chr5.4:73481732-73481751 | None:intergenic | 70.0% | |
| ! | CGGTGGCGGCGTGCCGTAAC+TGG | + | chr5.4:73481642-73481661 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 73478600 | 73483524 | 73478600 | ID=MS.gene038424 |
| chr5.4 | mRNA | 73478600 | 73483524 | 73478600 | ID=MS.gene038424.t1;Parent=MS.gene038424 |
| chr5.4 | exon | 73483471 | 73483524 | 73483471 | ID=MS.gene038424.t1.exon1;Parent=MS.gene038424.t1 |
| chr5.4 | CDS | 73483471 | 73483524 | 73483471 | ID=cds.MS.gene038424.t1;Parent=MS.gene038424.t1 |
| chr5.4 | exon | 73482800 | 73482910 | 73482800 | ID=MS.gene038424.t1.exon2;Parent=MS.gene038424.t1 |
| chr5.4 | CDS | 73482800 | 73482910 | 73482800 | ID=cds.MS.gene038424.t1;Parent=MS.gene038424.t1 |
| chr5.4 | exon | 73481851 | 73481964 | 73481851 | ID=MS.gene038424.t1.exon3;Parent=MS.gene038424.t1 |
| chr5.4 | CDS | 73481851 | 73481964 | 73481851 | ID=cds.MS.gene038424.t1;Parent=MS.gene038424.t1 |
| chr5.4 | exon | 73481454 | 73481650 | 73481454 | ID=MS.gene038424.t1.exon4;Parent=MS.gene038424.t1 |
| chr5.4 | CDS | 73481454 | 73481650 | 73481454 | ID=cds.MS.gene038424.t1;Parent=MS.gene038424.t1 |
| chr5.4 | exon | 73479155 | 73479245 | 73479155 | ID=MS.gene038424.t1.exon5;Parent=MS.gene038424.t1 |
| chr5.4 | CDS | 73479155 | 73479245 | 73479155 | ID=cds.MS.gene038424.t1;Parent=MS.gene038424.t1 |
| chr5.4 | exon | 73478854 | 73478965 | 73478854 | ID=MS.gene038424.t1.exon6;Parent=MS.gene038424.t1 |
| chr5.4 | CDS | 73478854 | 73478965 | 73478854 | ID=cds.MS.gene038424.t1;Parent=MS.gene038424.t1 |
| chr5.4 | exon | 73478600 | 73478775 | 73478600 | ID=MS.gene038424.t1.exon7;Parent=MS.gene038424.t1 |
| chr5.4 | CDS | 73478600 | 73478775 | 73478600 | ID=cds.MS.gene038424.t1;Parent=MS.gene038424.t1 |
| Gene Sequence |
| Protein sequence |
