Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018389.t1 | XP_003610237.2 | 96.7 | 512 | 14 | 1 | 1 | 512 | 1 | 509 | 1.30E-265 | 925.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018389.t1 | Q6KAE5 | 62.0 | 521 | 162 | 9 | 1 | 510 | 1 | 496 | 3.8e-157 | 556.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018389.t1 | G7JEC0 | 96.7 | 512 | 14 | 1 | 1 | 512 | 1 | 509 | 9.3e-266 | 925.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018389.t1 | MTR_4g129470 | 97.656 | 512 | 9 | 1 | 1 | 512 | 1 | 509 | 0.0 | 1030 |
MS.gene018389.t1 | MTR_4g129470 | 97.170 | 424 | 9 | 1 | 89 | 512 | 1 | 421 | 0.0 | 848 |
MS.gene018389.t1 | MTR_1g100797 | 59.057 | 403 | 150 | 4 | 7 | 401 | 1 | 396 | 6.84e-165 | 477 |
MS.gene018389.t1 | MTR_0020s0130 | 58.313 | 403 | 153 | 5 | 7 | 401 | 1 | 396 | 1.73e-161 | 468 |
MS.gene018389.t1 | MTR_1g100797 | 54.362 | 298 | 121 | 4 | 112 | 401 | 2 | 292 | 1.60e-103 | 316 |
MS.gene018389.t1 | MTR_2g096760 | 31.436 | 404 | 215 | 11 | 7 | 376 | 1 | 376 | 1.08e-41 | 155 |
MS.gene018389.t1 | MTR_4g063830 | 30.303 | 396 | 221 | 9 | 11 | 376 | 6 | 376 | 1.88e-36 | 140 |
MS.gene018389.t1 | MTR_4g021880 | 27.862 | 463 | 250 | 12 | 20 | 449 | 101 | 512 | 1.20e-32 | 131 |
MS.gene018389.t1 | MTR_4g021880 | 30.996 | 271 | 160 | 5 | 20 | 288 | 101 | 346 | 6.63e-23 | 101 |
MS.gene018389.t1 | MTR_6g027840 | 28.279 | 244 | 129 | 8 | 54 | 266 | 246 | 474 | 9.21e-16 | 80.5 |
MS.gene018389.t1 | MTR_1g089180 | 29.082 | 196 | 115 | 6 | 53 | 245 | 255 | 429 | 1.18e-14 | 76.6 |
MS.gene018389.t1 | MTR_7g031370 | 28.740 | 254 | 135 | 9 | 40 | 290 | 436 | 646 | 1.52e-13 | 73.9 |
MS.gene018389.t1 | MTR_7g031370 | 29.134 | 254 | 134 | 9 | 40 | 290 | 276 | 486 | 1.68e-13 | 73.6 |
MS.gene018389.t1 | MTR_4g092760 | 26.295 | 251 | 132 | 7 | 20 | 262 | 27 | 232 | 1.47e-12 | 70.5 |
MS.gene018389.t1 | MTR_5g043640 | 31.818 | 154 | 77 | 6 | 122 | 262 | 58 | 196 | 2.67e-12 | 67.4 |
MS.gene018389.t1 | MTR_7g100390 | 27.106 | 273 | 157 | 8 | 20 | 288 | 53 | 287 | 3.90e-12 | 68.9 |
MS.gene018389.t1 | MTR_5g077770 | 29.694 | 229 | 113 | 9 | 24 | 249 | 563 | 746 | 4.01e-12 | 69.3 |
MS.gene018389.t1 | MTR_5g019105 | 93.103 | 29 | 2 | 0 | 239 | 267 | 28 | 56 | 6.03e-12 | 61.2 |
MS.gene018389.t1 | MTR_1g115575 | 28.409 | 264 | 135 | 9 | 9 | 264 | 128 | 345 | 3.13e-11 | 66.2 |
MS.gene018389.t1 | MTR_4g116160 | 26.587 | 252 | 140 | 8 | 15 | 262 | 35 | 245 | 3.53e-11 | 65.9 |
MS.gene018389.t1 | MTR_4g116160 | 25.794 | 252 | 142 | 7 | 15 | 262 | 35 | 245 | 7.58e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018389.t1 | AT5G57740 | 65.703 | 519 | 153 | 12 | 1 | 509 | 1 | 504 | 0.0 | 632 |
MS.gene018389.t1 | AT5G07270 | 56.635 | 422 | 175 | 4 | 7 | 427 | 1 | 415 | 6.46e-164 | 474 |
MS.gene018389.t1 | AT2G28840 | 31.592 | 402 | 216 | 11 | 7 | 376 | 1 | 375 | 1.54e-36 | 141 |
MS.gene018389.t1 | AT2G28840 | 31.548 | 336 | 172 | 10 | 72 | 376 | 53 | 361 | 1.24e-26 | 112 |
MS.gene018389.t1 | AT5G14230 | 28.302 | 265 | 151 | 8 | 39 | 266 | 329 | 591 | 9.78e-16 | 80.9 |
MS.gene018389.t1 | AT5G14230 | 28.522 | 291 | 138 | 10 | 23 | 262 | 348 | 619 | 9.30e-13 | 71.2 |
MS.gene018389.t1 | AT5G14230 | 28.077 | 260 | 149 | 7 | 39 | 262 | 169 | 426 | 1.69e-15 | 79.7 |
MS.gene018389.t1 | AT5G14230 | 28.522 | 291 | 138 | 10 | 23 | 262 | 188 | 459 | 1.42e-12 | 70.5 |
MS.gene018389.t1 | AT2G31820 | 30.242 | 248 | 131 | 10 | 46 | 288 | 217 | 427 | 2.66e-14 | 76.3 |
MS.gene018389.t1 | AT3G12360 | 31.102 | 254 | 122 | 9 | 9 | 257 | 114 | 319 | 1.09e-13 | 73.9 |
MS.gene018389.t1 | AT3G12360 | 31.102 | 254 | 122 | 9 | 9 | 257 | 126 | 331 | 1.24e-13 | 73.9 |
MS.gene018389.t1 | AT3G04710 | 28.251 | 223 | 123 | 6 | 55 | 262 | 283 | 483 | 4.39e-13 | 72.4 |
MS.gene018389.t1 | AT5G02620 | 26.562 | 256 | 162 | 9 | 35 | 274 | 1 | 246 | 7.60e-13 | 71.2 |
MS.gene018389.t1 | AT5G02620 | 26.562 | 256 | 162 | 9 | 35 | 274 | 1 | 246 | 7.60e-13 | 71.2 |
MS.gene018389.t1 | AT5G02620 | 26.562 | 256 | 162 | 9 | 35 | 274 | 1 | 246 | 7.60e-13 | 71.2 |
MS.gene018389.t1 | AT3G04710 | 27.753 | 227 | 127 | 6 | 51 | 262 | 55 | 259 | 1.07e-12 | 70.5 |
MS.gene018389.t1 | AT5G02620 | 27.897 | 233 | 142 | 9 | 52 | 268 | 18 | 240 | 2.24e-12 | 69.7 |
MS.gene018389.t1 | AT5G02620 | 29.885 | 174 | 93 | 4 | 23 | 195 | 98 | 243 | 6.31e-12 | 68.6 |
MS.gene018389.t1 | AT5G02620 | 27.897 | 233 | 142 | 9 | 52 | 268 | 18 | 240 | 2.24e-12 | 69.7 |
MS.gene018389.t1 | AT5G02620 | 29.885 | 174 | 93 | 4 | 23 | 195 | 98 | 243 | 6.31e-12 | 68.6 |
MS.gene018389.t1 | AT1G07710 | 29.921 | 254 | 133 | 10 | 16 | 263 | 65 | 279 | 2.39e-12 | 69.7 |
MS.gene018389.t1 | AT1G07710 | 29.921 | 254 | 133 | 10 | 16 | 263 | 65 | 279 | 2.39e-12 | 69.7 |
MS.gene018389.t1 | AT2G03430 | 33.553 | 152 | 83 | 4 | 117 | 260 | 46 | 187 | 5.67e-12 | 66.2 |
MS.gene018389.t1 | AT1G05640 | 29.536 | 237 | 129 | 7 | 54 | 288 | 191 | 391 | 9.30e-12 | 68.2 |
MS.gene018389.t1 | AT1G05640 | 30.808 | 198 | 118 | 7 | 23 | 207 | 195 | 386 | 7.42e-11 | 65.1 |
MS.gene018389.t1 | AT3G04710 | 27.753 | 227 | 126 | 7 | 51 | 262 | 55 | 258 | 2.46e-11 | 66.2 |
MS.gene018389.t1 | AT2G14255 | 28.646 | 192 | 101 | 4 | 50 | 241 | 90 | 245 | 4.22e-11 | 65.9 |
MS.gene018389.t1 | AT5G20350 | 26.613 | 248 | 135 | 7 | 20 | 262 | 35 | 240 | 6.19e-11 | 65.5 |
MS.gene018389.t1 | AT5G60070 | 28.319 | 226 | 123 | 9 | 23 | 245 | 115 | 304 | 9.79e-11 | 64.7 |
Find 124 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGAAGGGGAAGAAAATT+TGG | 0.191675 | 8.2:+4973903 | None:intergenic |
CTCCATTTGGCTGCTTTAAA+TGG | 0.204812 | 8.2:-4977939 | MS.gene018389:CDS |
GGAACTACTATTGATTTAAT+TGG | 0.211124 | 8.2:-4977579 | MS.gene018389:intron |
AGTCTGGTTGGGAATTCTTT+TGG | 0.215532 | 8.2:-4978910 | MS.gene018389:CDS |
TTGGATCCACGTGAAGTTAT+TGG | 0.227928 | 8.2:+4973922 | None:intergenic |
AGATGTTCTGGTTCTGGTTT+TGG | 0.245396 | 8.2:-4973748 | MS.gene018389:CDS |
TACCAAGCGTCCCTAACTTT+TGG | 0.252337 | 8.2:-4977878 | MS.gene018389:CDS |
TTGACAAGATGTTCTGGTTC+TGG | 0.258460 | 8.2:-4973754 | MS.gene018389:CDS |
CTTGCAAGGTATTCGACTTT+TGG | 0.271778 | 8.2:-4978799 | MS.gene018389:CDS |
TGTAATATATCCCAAAAGTT+AGG | 0.292151 | 8.2:+4977867 | None:intergenic |
CCTTGATGGTTGCTCGTTCA+TGG | 0.299512 | 8.2:-4976187 | MS.gene018389:CDS |
GAAGTTATTGGTTTGCAAAA+TGG | 0.338692 | 8.2:+4973934 | None:intergenic |
CTCAACTCTAGTCTTTGTTT+AGG | 0.346862 | 8.2:-4973841 | MS.gene018389:CDS |
AACCATTTGACAAGATGTTC+TGG | 0.351599 | 8.2:-4973760 | MS.gene018389:CDS |
GTTTGTGGAACATAGGTATA+AGG | 0.361530 | 8.2:+4974152 | None:intergenic |
AGATCCATGTGCAGTTTGTT+TGG | 0.362914 | 8.2:-4975231 | MS.gene018389:CDS |
AGCTGATGTTACTCCTTCAT+TGG | 0.369879 | 8.2:-4973818 | MS.gene018389:CDS |
TTTGGTAGTGGTCTTGTGTC+TGG | 0.372671 | 8.2:+4974045 | None:intergenic |
GGAGGGCAGTACCTCCATTC+AGG | 0.376256 | 8.2:+4977958 | None:intergenic |
GTGTATCTCTTGCTTGAGTC+TGG | 0.396912 | 8.2:-4978634 | MS.gene018389:CDS |
TGGAGGTACTGCCCTCCATT+TGG | 0.397991 | 8.2:-4977952 | MS.gene018389:CDS |
GTTGTCCTTTGCATTACTTT+TGG | 0.399471 | 8.2:+4974027 | None:intergenic |
TCCCACCACATGCTGCATAA+TGG | 0.401799 | 8.2:+4976721 | None:intergenic |
TGTGCAGTTGCTCTTGGACT+TGG | 0.405253 | 8.2:-4977634 | MS.gene018389:CDS |
TGAAATTTCTAAGTCTGGTT+GGG | 0.412874 | 8.2:-4978921 | MS.gene018389:CDS |
AAATGTATGGTCGCTGTAGA+AGG | 0.413383 | 8.2:-4975203 | MS.gene018389:intron |
TTAGCCGAATGCACCGAGTA+TGG | 0.414587 | 8.2:+4977916 | None:intergenic |
GAACATGAAATTTCTAAGTC+TGG | 0.415403 | 8.2:-4978926 | None:intergenic |
AAGCTTGCCAACATGGTCAT+TGG | 0.417509 | 8.2:-4978139 | MS.gene018389:CDS |
AAGGAACGAAATCTTCTTGA+AGG | 0.425532 | 8.2:+4973889 | None:intergenic |
AGCTTGCCAACATGGTCATT+GGG | 0.431325 | 8.2:-4978138 | MS.gene018389:CDS |
TGAAAGTGTGCAGTTGCTCT+TGG | 0.431844 | 8.2:-4977640 | MS.gene018389:CDS |
CTGAGAGAAGGAAATCATCT+TGG | 0.432039 | 8.2:-4973708 | MS.gene018389:CDS |
TTGAAGATGGACTCCCTTGA+TGG | 0.437882 | 8.2:-4976201 | MS.gene018389:intron |
ACGTGTTCAAGTGAAGTTCT+TGG | 0.438387 | 8.2:-4973979 | MS.gene018389:CDS |
CTCGTTCATGGCATAGAAGT+TGG | 0.441525 | 8.2:-4976175 | MS.gene018389:CDS |
TCTTGTTGAAGTTGAGTTTG+TGG | 0.446504 | 8.2:+4974137 | None:intergenic |
ATGAAATTTCTAAGTCTGGT+TGG | 0.447499 | 8.2:-4978922 | MS.gene018389:CDS |
GTGCAGTTGCTCTTGGACTT+GGG | 0.447704 | 8.2:-4977633 | MS.gene018389:CDS |
AGGCATCACTGCGCTGCATA+TGG | 0.449962 | 8.2:-4977682 | MS.gene018389:CDS |
ATAAGTGGAAGAGATATATA+TGG | 0.450125 | 8.2:+4976098 | None:intergenic |
CTGCATATGGCAGCATTGAA+TGG | 0.451201 | 8.2:-4977669 | MS.gene018389:CDS |
TTCAATCAATCCGTTTCTAC+AGG | 0.452780 | 8.2:-4973676 | MS.gene018389:CDS |
CTGACTGCTGAGAATGCAAA+TGG | 0.460225 | 8.2:-4976531 | MS.gene018389:CDS |
TGAACACGTGCAAAATGTTA+AGG | 0.461338 | 8.2:+4973993 | None:intergenic |
TTGCATTACTCTGCAGCTCA+TGG | 0.463642 | 8.2:-4978760 | MS.gene018389:CDS |
TTGTTTGGAAAGGAAATGTA+TGG | 0.464104 | 8.2:-4975216 | MS.gene018389:CDS |
ATGGCCATACTCGGTGCATT+CGG | 0.469289 | 8.2:-4977920 | MS.gene018389:CDS |
AAGTTGAGTTTGTGGAACAT+AGG | 0.477507 | 8.2:+4974145 | None:intergenic |
GCACATGGATCTAAGCATAT+AGG | 0.478105 | 8.2:+4975242 | None:intergenic |
CTTTCCAAACAAACTGCACA+TGG | 0.481712 | 8.2:+4975227 | None:intergenic |
AACCAGAACATCTTGTCAAA+TGG | 0.484480 | 8.2:+4973758 | None:intergenic |
CAATCCGTTTCTACAGGAAG+TGG | 0.491465 | 8.2:-4973670 | MS.gene018389:CDS |
GCATCCACTTCCTGTAGAAA+CGG | 0.494458 | 8.2:+4973666 | None:intergenic |
TCTCAGGAATTATCGTGGTC+AGG | 0.496842 | 8.2:-4978599 | MS.gene018389:intron |
GTAATATATCCCAAAAGTTA+GGG | 0.497275 | 8.2:+4977868 | None:intergenic |
CTGCTTTAAATGGCCATACT+CGG | 0.498670 | 8.2:-4977929 | MS.gene018389:CDS |
TGTAGAAACGGATTGATTGA+AGG | 0.498824 | 8.2:+4973678 | None:intergenic |
CACAAAACAGATTACCTGAA+TGG | 0.504700 | 8.2:-4977972 | MS.gene018389:CDS |
GGCCATTTAAAGCAGCCAAA+TGG | 0.505632 | 8.2:+4977937 | None:intergenic |
CATGTGCAGTTTGTTTGGAA+AGG | 0.507634 | 8.2:-4975226 | MS.gene018389:CDS |
TCCCAAAAGTTAGGGACGCT+TGG | 0.509869 | 8.2:+4977876 | None:intergenic |
CTGGTGTTGATATTAATCTC+AGG | 0.518171 | 8.2:-4978615 | MS.gene018389:CDS |
CCAACATGGTCATTGGGAGG+TGG | 0.519366 | 8.2:-4978132 | MS.gene018389:CDS |
TTCCTAACAGAGAATGTGGC+TGG | 0.520240 | 8.2:-4975283 | MS.gene018389:intron |
GTAATTAACAAAACTTCTGA+TGG | 0.523746 | 8.2:-4977705 | MS.gene018389:CDS |
AGCAGTCAGACTAGCACCCT+TGG | 0.529380 | 8.2:+4976545 | None:intergenic |
TCTTCAGCTATTGATTGCCA+AGG | 0.531671 | 8.2:-4976562 | MS.gene018389:intron |
CTTGTGCAAGGAACCAATGA+AGG | 0.533363 | 8.2:+4973805 | None:intergenic |
CATTTAAAGCAGCCAAATGG+AGG | 0.534539 | 8.2:+4977940 | None:intergenic |
CTCCATTATGCAGCATGTGG+TGG | 0.535401 | 8.2:-4976723 | MS.gene018389:CDS |
TGAAGAGAATTGACAACTCA+AGG | 0.535842 | 8.2:+4973870 | None:intergenic |
AGAGGACAAGCTATTGAACC+TGG | 0.537680 | 8.2:+4974102 | None:intergenic |
TCCATTATGCAGCATGTGGT+GGG | 0.544452 | 8.2:-4976722 | MS.gene018389:CDS |
AGGAACGAAATCTTCTTGAA+GGG | 0.546898 | 8.2:+4973890 | None:intergenic |
TGAGCATTGTCAAAATTGCT+AGG | 0.550320 | 8.2:-4976076 | MS.gene018389:intron |
CTAGTTTCTGCAGCAAGAGA+TGG | 0.552390 | 8.2:-4978865 | MS.gene018389:CDS |
GGAAGAGATATATATGGCGA+AGG | 0.561512 | 8.2:+4976104 | None:intergenic |
CTTCAGCTATTGATTGCCAA+GGG | 0.565183 | 8.2:-4976561 | MS.gene018389:intron |
AATATAATCCACGTCTTGCA+AGG | 0.572310 | 8.2:-4978813 | MS.gene018389:CDS |
CCATGAACGAGCAACCATCA+AGG | 0.576241 | 8.2:+4976187 | None:intergenic |
CTTCTATTAGCACTTGTGCA+AGG | 0.580799 | 8.2:+4973793 | None:intergenic |
CAAGTTCTCAAACTGAGAGA+AGG | 0.581676 | 8.2:-4973720 | MS.gene018389:CDS |
ACTATACTGTGGCGACATAG+AGG | 0.581953 | 8.2:+4974084 | None:intergenic |
CGCTTGGTATATAGTCTGCA+AGG | 0.582268 | 8.2:+4977892 | None:intergenic |
TGCAAACCAATAACTTCACG+TGG | 0.583478 | 8.2:-4973928 | MS.gene018389:CDS |
AATAGTAGTTCCATCCTCTA+CGG | 0.584436 | 8.2:+4977590 | None:intergenic |
GTCGAATACCTTGCAAGACG+TGG | 0.585836 | 8.2:+4978805 | None:intergenic |
CATGAACGAGCAACCATCAA+GGG | 0.589970 | 8.2:+4976188 | None:intergenic |
CTTGGGAGCTTCTGTGTCCG+AGG | 0.591035 | 8.2:-4977616 | MS.gene018389:CDS |
TCCGAGGTTACCGTAGAGGA+TGG | 0.591591 | 8.2:-4977600 | MS.gene018389:CDS |
TGGTGATGTTCAAGAGGCGA+AGG | 0.592755 | 8.2:-4978845 | MS.gene018389:CDS |
TCAATTCCTAACAGAGAATG+TGG | 0.598490 | 8.2:-4975287 | MS.gene018389:intron |
TTGATGCAAGCTTGCCAACA+TGG | 0.601264 | 8.2:-4978146 | MS.gene018389:CDS |
CACTACCAAAAGTAATGCAA+AGG | 0.606802 | 8.2:-4974032 | MS.gene018389:CDS |
ATTAACAAAACTTCTGATGG+AGG | 0.611011 | 8.2:-4977702 | MS.gene018389:CDS |
GAGGACAAGCTATTGAACCT+GGG | 0.612469 | 8.2:+4974103 | None:intergenic |
CCACCTCCCAATGACCATGT+TGG | 0.614473 | 8.2:+4978132 | None:intergenic |
TCCATCCTCTACGGTAACCT+CGG | 0.615721 | 8.2:+4977599 | None:intergenic |
GGAACGAAATCTTCTTGAAG+GGG | 0.616699 | 8.2:+4973891 | None:intergenic |
AAGAGATGGTGATGTTCAAG+AGG | 0.619180 | 8.2:-4978851 | MS.gene018389:CDS |
CAATCTCAGAATTTGATCAA+AGG | 0.622386 | 8.2:-4977827 | MS.gene018389:intron |
ATGGCATAGAAGTTGGCTTG+AGG | 0.627590 | 8.2:-4976168 | MS.gene018389:CDS |
TGTGTCCGAGGTTACCGTAG+AGG | 0.631676 | 8.2:-4977604 | MS.gene018389:CDS |
ATTTAAAGCAGCCAAATGGA+GGG | 0.637897 | 8.2:+4977941 | None:intergenic |
TGACTGCTGAGAATGCAAAT+GGG | 0.638673 | 8.2:-4976530 | MS.gene018389:intron |
CATACGAAGTGGTGTTTGTG+AGG | 0.641986 | 8.2:-4977727 | MS.gene018389:intron |
TCAACTTCAACAAGAACACA+TGG | 0.651528 | 8.2:-4974129 | MS.gene018389:CDS |
AGGACAAGCTATTGAACCTG+GGG | 0.651920 | 8.2:+4974104 | None:intergenic |
CCACTCCATTATGCAGCATG+TGG | 0.652184 | 8.2:-4976726 | MS.gene018389:CDS |
AAATGGTGTTGTCATGTCTG+TGG | 0.653781 | 8.2:+4973951 | None:intergenic |
GTGCTAATAGAAGAAACTTG+AGG | 0.655442 | 8.2:-4973783 | MS.gene018389:CDS |
TGAGCTGCAGAGTAATGCAA+AGG | 0.656866 | 8.2:+4978763 | None:intergenic |
CCACATGCTGCATAATGGAG+TGG | 0.671484 | 8.2:+4976726 | None:intergenic |
ACGTGGATTATATTCTAACA+AGG | 0.672327 | 8.2:+4978822 | None:intergenic |
TTGCCAACATGGTCATTGGG+AGG | 0.672352 | 8.2:-4978135 | MS.gene018389:CDS |
AAAACAGATTACCTGAATGG+AGG | 0.674826 | 8.2:-4977969 | MS.gene018389:CDS |
ATTAATCTCAGGAATTATCG+TGG | 0.678184 | 8.2:-4978604 | MS.gene018389:CDS |
GCAACTGCACACTTTCAACA+TGG | 0.678568 | 8.2:+4977646 | None:intergenic |
TGCAGCTCATGGCCACCATG+AGG | 0.682766 | 8.2:-4978749 | MS.gene018389:intron |
CTAACAGAGAATGTGGCTGG+AGG | 0.704497 | 8.2:-4975280 | MS.gene018389:intron |
GGACAAGCTATTGAACCTGG+GGG | 0.729015 | 8.2:+4974105 | None:intergenic |
TGTAAGTATATACCTCATGG+TGG | 0.729691 | 8.2:+4978737 | None:intergenic |
TAACAAATGAGACTATACTG+TGG | 0.749737 | 8.2:+4974073 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTACATATATTAAGTAAT+TGG | - | chr8.2:4977622-4977641 | MS.gene018389:CDS | 10.0% |
!! | TACTCAAATTTATATTTATT+TGG | - | chr8.2:4976848-4976867 | MS.gene018389:intron | 10.0% |
!! | AACATTTATAGAATTCAATT+AGG | - | chr8.2:4975700-4975719 | MS.gene018389:intron | 15.0% |
!! | AAGGTTATTAATTAAATGTT+AGG | + | chr8.2:4976580-4976599 | None:intergenic | 15.0% |
!! | AATATAGTAAATGTTTAGAT+TGG | + | chr8.2:4975466-4975485 | None:intergenic | 15.0% |
!! | ACATTAGAAATTATTGTTAT+TGG | - | chr8.2:4978289-4978308 | MS.gene018389:intron | 15.0% |
!! | ACATTGAAACAAAATAATAT+TGG | + | chr8.2:4974016-4974035 | None:intergenic | 15.0% |
!! | ATATAGTAAATGTTTAGATT+GGG | + | chr8.2:4975465-4975484 | None:intergenic | 15.0% |
!! | TAAAAACTTCATAATCTAAT+AGG | + | chr8.2:4977128-4977147 | None:intergenic | 15.0% |
!! | TTAATAAAATAGCACAAAAT+CGG | + | chr8.2:4974527-4974546 | None:intergenic | 15.0% |
!!! | TAAAATATTGCTTGTTAAAT+TGG | - | chr8.2:4974580-4974599 | MS.gene018389:intron | 15.0% |
!!! | TATTAAAACAATTTTTCACA+TGG | + | chr8.2:4976650-4976669 | None:intergenic | 15.0% |
!! | ACAATAATTTCTAATGTCAT+AGG | + | chr8.2:4978286-4978305 | None:intergenic | 20.0% |
!! | AGATATAGTCAACTAAATTA+AGG | + | chr8.2:4974045-4974064 | None:intergenic | 20.0% |
!! | AGCAAATAATTAGAAAGTAA+TGG | - | chr8.2:4977696-4977715 | MS.gene018389:CDS | 20.0% |
!! | ATAACTAACTTACTTTACAA+TGG | - | chr8.2:4975276-4975295 | MS.gene018389:CDS | 20.0% |
!! | ATTAAATGTTAGGAAGAAAT+TGG | + | chr8.2:4976570-4976589 | None:intergenic | 20.0% |
!! | TATAGTAAATGTTTAGATTG+GGG | + | chr8.2:4975464-4975483 | None:intergenic | 20.0% |
!! | TGAACAAATATAGCATTATT+TGG | + | chr8.2:4977099-4977118 | None:intergenic | 20.0% |
!! | TTATGATCTATTTAGATCAT+AGG | - | chr8.2:4976162-4976181 | MS.gene018389:CDS | 20.0% |
!!! | AATTTCTACTAGAGTATTTT+GGG | + | chr8.2:4978082-4978101 | None:intergenic | 20.0% |
!!! | ATATGATAAATTGATAATGC+AGG | - | chr8.2:4978381-4978400 | MS.gene018389:intron | 20.0% |
!!! | ATGTTTTTTCCATTTGTTTT+TGG | + | chr8.2:4977742-4977761 | None:intergenic | 20.0% |
!!! | ATTGGCTTTAAAAATAATCA+GGG | + | chr8.2:4974485-4974504 | None:intergenic | 20.0% |
!!! | TAGTATCGTAGAATTTTATT+CGG | + | chr8.2:4976819-4976838 | None:intergenic | 20.0% |
!!! | TATTGATTTTGTTTTGAAGA+TGG | - | chr8.2:4976371-4976390 | MS.gene018389:intron | 20.0% |
!!! | TATTTTTATTTACAGGTTCT+GGG | - | chr8.2:4975830-4975849 | MS.gene018389:intron | 20.0% |
!!! | TCAAATTTTATGTATTCCAA+AGG | - | chr8.2:4977234-4977253 | MS.gene018389:intron | 20.0% |
!!! | TGCTATCTATTTTTATTTAC+AGG | - | chr8.2:4975823-4975842 | MS.gene018389:intron | 20.0% |
! | AAAATGAAACAGTCTTCTAA+AGG | + | chr8.2:4975922-4975941 | None:intergenic | 25.0% |
! | AAAATGCTTCATGTTTAAAG+CGG | - | chr8.2:4975767-4975786 | MS.gene018389:intron | 25.0% |
! | AACTGATTATACTTTGAATG+CGG | - | chr8.2:4976768-4976787 | MS.gene018389:intron | 25.0% |
! | AAGTTAATTCTGTCTTTGAA+TGG | - | chr8.2:4974832-4974851 | MS.gene018389:intron | 25.0% |
! | AATGTGTAGAATGTAGATAA+TGG | + | chr8.2:4975572-4975591 | None:intergenic | 25.0% |
! | AATTGTAAGTATATACCTCA+TGG | + | chr8.2:4973854-4973873 | None:intergenic | 25.0% |
! | ACACTAAACCAATATTGTTA+AGG | - | chr8.2:4978246-4978265 | MS.gene018389:intron | 25.0% |
! | AGATCAAACTAGTTAACTTA+GGG | + | chr8.2:4975795-4975814 | None:intergenic | 25.0% |
! | AGATCAATAATAGTAACCTT+TGG | + | chr8.2:4977253-4977272 | None:intergenic | 25.0% |
! | ATAAGTGGAAGAGATATATA+TGG | + | chr8.2:4976490-4976509 | None:intergenic | 25.0% |
! | ATAGTAAATGTTTAGATTGG+GGG | + | chr8.2:4975463-4975482 | None:intergenic | 25.0% |
! | CATATATTAAGTAATTGGTC+AGG | - | chr8.2:4977627-4977646 | MS.gene018389:CDS | 25.0% |
! | CATCAATATTGTTCAACATT+TGG | - | chr8.2:4975215-4975234 | MS.gene018389:CDS | 25.0% |
! | GAATAAAATTCTACGATACT+AGG | - | chr8.2:4976818-4976837 | MS.gene018389:intron | 25.0% |
! | GTAAAATTATAAACCAGTAG+AGG | + | chr8.2:4977997-4978016 | None:intergenic | 25.0% |
! | GTAATATATCCCAAAAGTTA+GGG | + | chr8.2:4974720-4974739 | None:intergenic | 25.0% |
! | GTAATTAACAAAACTTCTGA+TGG | - | chr8.2:4974880-4974899 | MS.gene018389:intron | 25.0% |
! | TAAAAATAGATAGCAGTTAG+TGG | + | chr8.2:4975818-4975837 | None:intergenic | 25.0% |
! | TAACCTTTCAAGATTGATAT+TGG | - | chr8.2:4976593-4976612 | MS.gene018389:intron | 25.0% |
! | TAGATGAGTTTAGTCATTTA+AGG | - | chr8.2:4976992-4977011 | MS.gene018389:intron | 25.0% |
! | TCGTAGTAAGTTAAAAACAA+GGG | + | chr8.2:4976206-4976225 | None:intergenic | 25.0% |
! | TGAACAATATTGATGAGAAA+TGG | + | chr8.2:4975210-4975229 | None:intergenic | 25.0% |
! | TGTAATATATCCCAAAAGTT+AGG | + | chr8.2:4974721-4974740 | None:intergenic | 25.0% |
! | TTGCCAATAAAAATACAAAG+AGG | + | chr8.2:4978039-4978058 | None:intergenic | 25.0% |
!! | AGGAAGAACTTGTAAATTTT+CGG | + | chr8.2:4976464-4976483 | None:intergenic | 25.0% |
!! | ATTTTCTCTTATGTAGTACA+GGG | + | chr8.2:4975752-4975771 | None:intergenic | 25.0% |
!! | TCTACTTTGAATGTATTTTC+TGG | + | chr8.2:4977538-4977557 | None:intergenic | 25.0% |
!! | TTAGAAGACTGTTTCATTTT+AGG | - | chr8.2:4975922-4975941 | MS.gene018389:intron | 25.0% |
!! | TTGGATATGTTTTCTACAAA+TGG | - | chr8.2:4977651-4977670 | MS.gene018389:CDS | 25.0% |
!! | TTTTACATGGAAAAATGATC+TGG | - | chr8.2:4977447-4977466 | MS.gene018389:intron | 25.0% |
!!! | AGCATCATTTGATTTTAACA+AGG | - | chr8.2:4976676-4976695 | MS.gene018389:intron | 25.0% |
!!! | ATGTAGATAATGGAATATGA+TGG | + | chr8.2:4975562-4975581 | None:intergenic | 25.0% |
!!! | ATTTTGCAAGTGTTTCTATA+TGG | - | chr8.2:4977832-4977851 | MS.gene018389:CDS | 25.0% |
!!! | CAATTTCTACTAGAGTATTT+TGG | + | chr8.2:4978083-4978102 | None:intergenic | 25.0% |
!!! | CATTGGCTTTAAAAATAATC+AGG | + | chr8.2:4974486-4974505 | None:intergenic | 25.0% |
!!! | CTACCTCTTTGTATTTTTAT+TGG | - | chr8.2:4978033-4978052 | MS.gene018389:intron | 25.0% |
!!! | CTATTTTTATTTACAGGTTC+TGG | - | chr8.2:4975829-4975848 | MS.gene018389:intron | 25.0% |
!!! | CTTCAAACTTTTGTTGTTTT+GGG | - | chr8.2:4974334-4974353 | MS.gene018389:intron | 25.0% |
!!! | GGAACTACTATTGATTTAAT+TGG | - | chr8.2:4975006-4975025 | MS.gene018389:intron | 25.0% |
AAACACGATACAAGAAAATG+AGG | + | chr8.2:4973884-4973903 | None:intergenic | 30.0% | |
AACCTTTGAATCAATGGTAA+AGG | - | chr8.2:4977788-4977807 | MS.gene018389:intron | 30.0% | |
AAGAGGTAGATGACAAAATA+TGG | + | chr8.2:4978022-4978041 | None:intergenic | 30.0% | |
AAGTTAAAAACAAGGGGTAA+AGG | + | chr8.2:4976199-4976218 | None:intergenic | 30.0% | |
AATAAAAACTGAGCAATGTC+TGG | + | chr8.2:4977890-4977909 | None:intergenic | 30.0% | |
AATGACAACCTTTGAATCAA+TGG | - | chr8.2:4977782-4977801 | MS.gene018389:intron | 30.0% | |
ACATAACTATGCTTCTTTGT+TGG | - | chr8.2:4977758-4977777 | MS.gene018389:intron | 30.0% | |
AGAGGTAGATGACAAAATAT+GGG | + | chr8.2:4978021-4978040 | None:intergenic | 30.0% | |
AGATTCACTATCTATCGTAT+TGG | - | chr8.2:4976225-4976244 | MS.gene018389:intron | 30.0% | |
ATCACTTAATCACATGAACT+AGG | + | chr8.2:4975048-4975067 | None:intergenic | 30.0% | |
ATGAAATTTCTAAGTCTGGT+TGG | - | chr8.2:4973663-4973682 | MS.gene018389:CDS | 30.0% | |
ATGTTTCTTTCGTTTACAGA+GGG | - | chr8.2:4974370-4974389 | MS.gene018389:intron | 30.0% | |
ATTAACAAAACTTCTGATGG+AGG | - | chr8.2:4974883-4974902 | MS.gene018389:intron | 30.0% | |
ATTAATCTCAGGAATTATCG+TGG | - | chr8.2:4973981-4974000 | MS.gene018389:CDS | 30.0% | |
ATTTAGAAGTAGGTGAAAGA+GGG | + | chr8.2:4975658-4975677 | None:intergenic | 30.0% | |
CAACCAATATCAATCTTGAA+AGG | + | chr8.2:4976599-4976618 | None:intergenic | 30.0% | |
CAAGCACTATGTATCTTAAA+TGG | - | chr8.2:4976325-4976344 | MS.gene018389:intron | 30.0% | |
CAATCTCAGAATTTGATCAA+AGG | - | chr8.2:4974758-4974777 | MS.gene018389:intron | 30.0% | |
CATGTGATTATGTGCATATT+TGG | - | chr8.2:4976879-4976898 | MS.gene018389:intron | 30.0% | |
CGTAGTAAGTTAAAAACAAG+GGG | + | chr8.2:4976205-4976224 | None:intergenic | 30.0% | |
CTCGTAGTAAGTTAAAAACA+AGG | + | chr8.2:4976207-4976226 | None:intergenic | 30.0% | |
CTTACTGCAACAGTTTATAA+TGG | + | chr8.2:4974815-4974834 | None:intergenic | 30.0% | |
CTTAGTAAACATTAGACAAG+AGG | + | chr8.2:4975605-4975624 | None:intergenic | 30.0% | |
GAGATCAAACTAGTTAACTT+AGG | + | chr8.2:4975796-4975815 | None:intergenic | 30.0% | |
GAGTTAGAGATCTTCAATAT+AGG | - | chr8.2:4976904-4976923 | MS.gene018389:intron | 30.0% | |
GATCAAACTAGTTAACTTAG+GGG | + | chr8.2:4975794-4975813 | None:intergenic | 30.0% | |
GTTTAGTGTTTGAATTGACA+AGG | + | chr8.2:4978235-4978254 | None:intergenic | 30.0% | |
TAACAAATGAGACTATACTG+TGG | + | chr8.2:4978515-4978534 | None:intergenic | 30.0% | |
TAACTTACTTTACAATGGCT+TGG | - | chr8.2:4975281-4975300 | MS.gene018389:intron | 30.0% | |
TACTGCTAAGATTTAGAAGT+AGG | + | chr8.2:4975668-4975687 | None:intergenic | 30.0% | |
TAGTAAATGTTTAGATTGGG+GGG | + | chr8.2:4975462-4975481 | None:intergenic | 30.0% | |
TGAAATTTCTAAGTCTGGTT+GGG | - | chr8.2:4973664-4973683 | MS.gene018389:CDS | 30.0% | |
TGGCACAATAAAATTTGTAG+TGG | - | chr8.2:4975301-4975320 | MS.gene018389:intron | 30.0% | |
TTCTATATGGAGTTATTGCA+CGG | - | chr8.2:4977845-4977864 | MS.gene018389:CDS | 30.0% | |
TTGCAAAATACGTTTCTCTA+TGG | + | chr8.2:4977821-4977840 | None:intergenic | 30.0% | |
TTGCAGTAATGATCTTACAT+TGG | + | chr8.2:4974503-4974522 | None:intergenic | 30.0% | |
TTGTTTGGAAAGGAAATGTA+TGG | - | chr8.2:4977369-4977388 | MS.gene018389:intron | 30.0% | |
! | AACTTACCTTATTTACAGCT+TGG | - | chr8.2:4976120-4976139 | MS.gene018389:CDS | 30.0% |
! | ACGTGGATTATATTCTAACA+AGG | + | chr8.2:4973766-4973785 | None:intergenic | 30.0% |
! | CATTTTCTCTTATGTAGTAC+AGG | + | chr8.2:4975753-4975772 | None:intergenic | 30.0% |
! | GAAATTGGTTGAATTTTGAG+AGG | + | chr8.2:4976555-4976574 | None:intergenic | 30.0% |
! | GTGTACGTTTGTTAAAATCA+TGG | - | chr8.2:4975409-4975428 | MS.gene018389:intron | 30.0% |
! | TACGTTTGTTAAAATCATGG+TGG | - | chr8.2:4975412-4975431 | MS.gene018389:intron | 30.0% |
! | TATAGGTTTTGCCAATACTT+TGG | - | chr8.2:4976921-4976940 | MS.gene018389:intron | 30.0% |
! | TGAGGATAGATAAACAGTTT+TGG | + | chr8.2:4975494-4975513 | None:intergenic | 30.0% |
! | TGCTAGATCAATGTTTTCAA+AGG | + | chr8.2:4974268-4974287 | None:intergenic | 30.0% |
! | TTATTTTCCATGAACGTGTT+TGG | - | chr8.2:4977905-4977924 | MS.gene018389:CDS | 30.0% |
! | TTTTCAAATTGTGCCTATAC+CGG | - | chr8.2:4974194-4974213 | MS.gene018389:intron | 30.0% |
! | TTTTCTCTTATGTAGTACAG+GGG | + | chr8.2:4975751-4975770 | None:intergenic | 30.0% |
!! | ATTTTGACAATGCTCATAAG+TGG | + | chr8.2:4976505-4976524 | None:intergenic | 30.0% |
!! | CTGATATAGATGGTTTTACA+TGG | - | chr8.2:4977434-4977453 | MS.gene018389:intron | 30.0% |
!! | CTTTTGGAAACTTGCATAAT+TGG | - | chr8.2:4975153-4975172 | MS.gene018389:intron | 30.0% |
!! | GAAGTTATTGGTTTGCAAAA+TGG | + | chr8.2:4978654-4978673 | None:intergenic | 30.0% |
!! | GATAATGGAATATGATGGAA+AGG | + | chr8.2:4975557-4975576 | None:intergenic | 30.0% |
!! | GTGCTTCTTCATTTTTCTTT+TGG | - | chr8.2:4975137-4975156 | MS.gene018389:intron | 30.0% |
!! | GTTATTGGCTTAAAAAGTGT+TGG | - | chr8.2:4978304-4978323 | MS.gene018389:intron | 30.0% |
!! | TTCCTTTACCATTGATTCAA+AGG | + | chr8.2:4977793-4977812 | None:intergenic | 30.0% |
!!! | GCTTCAAACTTTTGTTGTTT+TGG | - | chr8.2:4974333-4974352 | MS.gene018389:intron | 30.0% |
!!! | TTTTGGGATATATTACAGAC+AGG | - | chr8.2:4974724-4974743 | MS.gene018389:intron | 30.0% |
AAAACAGATTACCTGAATGG+AGG | - | chr8.2:4974616-4974635 | MS.gene018389:intron | 35.0% | |
AACATGCCAAGCTGTAAATA+AGG | + | chr8.2:4976129-4976148 | None:intergenic | 35.0% | |
AACCAGAACATCTTGTCAAA+TGG | + | chr8.2:4978830-4978849 | None:intergenic | 35.0% | |
AACCATTTGACAAGATGTTC+TGG | - | chr8.2:4978825-4978844 | MS.gene018389:CDS | 35.0% | |
AAGGAACGAAATCTTCTTGA+AGG | + | chr8.2:4978699-4978718 | None:intergenic | 35.0% | |
AAGTTGAGTTTGTGGAACAT+AGG | + | chr8.2:4978443-4978462 | None:intergenic | 35.0% | |
AATAGTAGTTCCATCCTCTA+CGG | + | chr8.2:4974998-4975017 | None:intergenic | 35.0% | |
AATATAATCCACGTCTTGCA+AGG | - | chr8.2:4973772-4973791 | MS.gene018389:CDS | 35.0% | |
AATATTGATGAGAAATGGCC+AGG | + | chr8.2:4975205-4975224 | None:intergenic | 35.0% | |
ACACTCAATGCTGATATAGA+TGG | - | chr8.2:4977424-4977443 | MS.gene018389:intron | 35.0% | |
AGGAACGAAATCTTCTTGAA+GGG | + | chr8.2:4978698-4978717 | None:intergenic | 35.0% | |
ATAACAACATACGCAAGAAG+AGG | + | chr8.2:4977279-4977298 | None:intergenic | 35.0% | |
ATATTGATGAGAAATGGCCA+GGG | + | chr8.2:4975204-4975223 | None:intergenic | 35.0% | |
ATCTCTCCAAACCAAAGTAT+TGG | + | chr8.2:4976935-4976954 | None:intergenic | 35.0% | |
ATTAAGTAATTGGTCAGGCT+TGG | - | chr8.2:4977632-4977651 | MS.gene018389:CDS | 35.0% | |
ATTCAACTGCAACTCATGTT+TGG | - | chr8.2:4975329-4975348 | MS.gene018389:intron | 35.0% | |
CACAAAACAGATTACCTGAA+TGG | - | chr8.2:4974613-4974632 | MS.gene018389:intron | 35.0% | |
CACTACCAAAAGTAATGCAA+AGG | - | chr8.2:4978553-4978572 | MS.gene018389:intron | 35.0% | |
CATGTTTCTTTCGTTTACAG+AGG | - | chr8.2:4974369-4974388 | MS.gene018389:intron | 35.0% | |
CCAAACATGCATTGAATTGA+TGG | + | chr8.2:4978116-4978135 | None:intergenic | 35.0% | |
CCATCAATTCAATGCATGTT+TGG | - | chr8.2:4978113-4978132 | MS.gene018389:CDS | 35.0% | |
CTCTGTAAACGAAAGAAACA+TGG | + | chr8.2:4974371-4974390 | None:intergenic | 35.0% | |
GAGCAGAGTCAATAAATTCA+TGG | + | chr8.2:4976712-4976731 | None:intergenic | 35.0% | |
GATTTAGAAGTAGGTGAAAG+AGG | + | chr8.2:4975659-4975678 | None:intergenic | 35.0% | |
GGTATGACAAAATTGTGCAT+AGG | + | chr8.2:4978214-4978233 | None:intergenic | 35.0% | |
GTGCTAATAGAAGAAACTTG+AGG | - | chr8.2:4978802-4978821 | MS.gene018389:CDS | 35.0% | |
GTTCACACACCAAAAACAAA+TGG | - | chr8.2:4977730-4977749 | MS.gene018389:intron | 35.0% | |
GTTTGTGGAACATAGGTATA+AGG | + | chr8.2:4978436-4978455 | None:intergenic | 35.0% | |
TAACAACATACGCAAGAAGA+GGG | + | chr8.2:4977278-4977297 | None:intergenic | 35.0% | |
TCAACAAAATCACGTTGTCA+TGG | + | chr8.2:4978164-4978183 | None:intergenic | 35.0% | |
TCAACTTCAACAAGAACACA+TGG | - | chr8.2:4978456-4978475 | MS.gene018389:intron | 35.0% | |
TCAATTCCTAACAGAGAATG+TGG | - | chr8.2:4977298-4977317 | MS.gene018389:intron | 35.0% | |
TCTAATGTCATAGGTCTATG+AGG | + | chr8.2:4978277-4978296 | None:intergenic | 35.0% | |
TCTTGAAGGGGAAGAAAATT+TGG | + | chr8.2:4978685-4978704 | None:intergenic | 35.0% | |
TCTTGTTGAAGTTGAGTTTG+TGG | + | chr8.2:4978451-4978470 | None:intergenic | 35.0% | |
TGAACACGTGCAAAATGTTA+AGG | + | chr8.2:4978595-4978614 | None:intergenic | 35.0% | |
TGAAGAGAATTGACAACTCA+AGG | + | chr8.2:4978718-4978737 | None:intergenic | 35.0% | |
TGTAAGTATATACCTCATGG+TGG | + | chr8.2:4973851-4973870 | None:intergenic | 35.0% | |
TTCAATCAATCCGTTTCTAC+AGG | - | chr8.2:4978909-4978928 | MS.gene018389:CDS | 35.0% | |
! | AGAACTTGTAAATTTTCGGC+TGG | + | chr8.2:4976460-4976479 | None:intergenic | 35.0% |
! | AGGTGTCACCTTAACAATAT+TGG | + | chr8.2:4978257-4978276 | None:intergenic | 35.0% |
! | ATGTTTTCAAAGGCAAATCG+CGG | + | chr8.2:4974258-4974277 | None:intergenic | 35.0% |
! | ATTTAAAGCAGCCAAATGGA+GGG | + | chr8.2:4974647-4974666 | None:intergenic | 35.0% |
! | CTCAACTCTAGTCTTTGTTT+AGG | - | chr8.2:4978744-4978763 | MS.gene018389:intron | 35.0% |
! | GAAAAATGAAGAAGCACACA+TGG | + | chr8.2:4975134-4975153 | None:intergenic | 35.0% |
! | GTTGTCCTTTGCATTACTTT+TGG | + | chr8.2:4978561-4978580 | None:intergenic | 35.0% |
! | GTTTTGCCAATACTTTGGTT+TGG | - | chr8.2:4976926-4976945 | MS.gene018389:intron | 35.0% |
! | TGAGCATTGTCAAAATTGCT+AGG | - | chr8.2:4976509-4976528 | MS.gene018389:intron | 35.0% |
!! | AGATACTTGCTTTGGAAAGT+CGG | - | chr8.2:4975071-4975090 | MS.gene018389:intron | 35.0% |
!! | CTGGTGTTGATATTAATCTC+AGG | - | chr8.2:4973970-4973989 | MS.gene018389:CDS | 35.0% |
!! | CTTTGCATTACTTTTGGTAG+TGG | + | chr8.2:4978555-4978574 | None:intergenic | 35.0% |
!! | TGTAGAAACGGATTGATTGA+AGG | + | chr8.2:4978910-4978929 | None:intergenic | 35.0% |
!! | TTGGTTGAATTTTGAGAGGA+TGG | + | chr8.2:4976551-4976570 | None:intergenic | 35.0% |
!!! | GTATTTTGGGTTCTAATGTG+TGG | + | chr8.2:4978069-4978088 | None:intergenic | 35.0% |
AAAAACTGAGCAATGTCTGG+TGG | + | chr8.2:4977887-4977906 | None:intergenic | 40.0% | |
AAATGTATGGTCGCTGTAGA+AGG | - | chr8.2:4977382-4977401 | MS.gene018389:intron | 40.0% | |
AATCAGTTAAATCCACCTGC+TGG | + | chr8.2:4976756-4976775 | None:intergenic | 40.0% | |
ACGTGTTCAAGTGAAGTTCT+TGG | - | chr8.2:4978606-4978625 | MS.gene018389:CDS | 40.0% | |
ACTGCAACTCATGTTTGGAT+TGG | - | chr8.2:4975334-4975353 | MS.gene018389:intron | 40.0% | |
AGCTGATGTTACTCCTTCAT+TGG | - | chr8.2:4978767-4978786 | MS.gene018389:CDS | 40.0% | |
ATGTTTACTAAGCACAGCCT+TGG | - | chr8.2:4975613-4975632 | MS.gene018389:intron | 40.0% | |
ATTGCAATGTCAAGGAAGCT+TGG | - | chr8.2:4977504-4977523 | MS.gene018389:intron | 40.0% | |
CAAGTTCTCAAACTGAGAGA+AGG | - | chr8.2:4978865-4978884 | MS.gene018389:CDS | 40.0% | |
CACAACAGATTGATGGAGTT+TGG | - | chr8.2:4974128-4974147 | MS.gene018389:CDS | 40.0% | |
CTGAGAGAAGGAAATCATCT+TGG | - | chr8.2:4978877-4978896 | MS.gene018389:CDS | 40.0% | |
CTTCTATTAGCACTTGTGCA+AGG | + | chr8.2:4978795-4978814 | None:intergenic | 40.0% | |
CTTTCCAAACAAACTGCACA+TGG | + | chr8.2:4977361-4977380 | None:intergenic | 40.0% | |
GCACATGGATCTAAGCATAT+AGG | + | chr8.2:4977346-4977365 | None:intergenic | 40.0% | |
GCTATAGCACAACAGATTGA+TGG | - | chr8.2:4974121-4974140 | MS.gene018389:CDS | 40.0% | |
GGAAACAATCGAGAGATAGT+AGG | + | chr8.2:4975107-4975126 | None:intergenic | 40.0% | |
GGAACGAAATCTTCTTGAAG+GGG | + | chr8.2:4978697-4978716 | None:intergenic | 40.0% | |
GGAAGAGATATATATGGCGA+AGG | + | chr8.2:4976484-4976503 | None:intergenic | 40.0% | |
GTGATGTCAGATACTTGCTT+TGG | - | chr8.2:4975063-4975082 | MS.gene018389:intron | 40.0% | |
GTGCAACAATTGCAATGTCA+AGG | - | chr8.2:4977496-4977515 | MS.gene018389:intron | 40.0% | |
TATCCTCATATAGCATGAGC+TGG | - | chr8.2:4975506-4975525 | MS.gene018389:intron | 40.0% | |
TGACTGCTGAGAATGCAAAT+GGG | - | chr8.2:4976055-4976074 | MS.gene018389:intron | 40.0% | |
TGAGTTTGAACAAATCACGC+TGG | - | chr8.2:4975360-4975379 | MS.gene018389:intron | 40.0% | |
TGCAAACCAATAACTTCACG+TGG | - | chr8.2:4978657-4978676 | MS.gene018389:intron | 40.0% | |
TGGAAGAGAAAAGGATCACA+TGG | + | chr8.2:4977939-4977958 | None:intergenic | 40.0% | |
TTGAATGGTTGCATACGAAG+TGG | - | chr8.2:4974847-4974866 | MS.gene018389:intron | 40.0% | |
TTGGATCCACGTGAAGTTAT+TGG | + | chr8.2:4978666-4978685 | None:intergenic | 40.0% | |
TTTGACACCAAACACGTTCA+TGG | + | chr8.2:4977915-4977934 | None:intergenic | 40.0% | |
! | AAGAGATGGTGATGTTCAAG+AGG | - | chr8.2:4973734-4973753 | MS.gene018389:CDS | 40.0% |
! | ACAGCAGCTTTGGTCTTTAT+GGG | - | chr8.2:4976619-4976638 | MS.gene018389:intron | 40.0% |
! | ACTTGTAAATTTTCGGCTGG+AGG | + | chr8.2:4976457-4976476 | None:intergenic | 40.0% |
! | AGATCCATGTGCAGTTTGTT+TGG | - | chr8.2:4977354-4977373 | MS.gene018389:intron | 40.0% |
! | AGTCTGGTTGGGAATTCTTT+TGG | - | chr8.2:4973675-4973694 | MS.gene018389:CDS | 40.0% |
! | ATATTGGTTGACAGCAGCTT+TGG | - | chr8.2:4976609-4976628 | MS.gene018389:intron | 40.0% |
! | CATGTGCAGTTTGTTTGGAA+AGG | - | chr8.2:4977359-4977378 | MS.gene018389:intron | 40.0% |
! | CATTTAAAGCAGCCAAATGG+AGG | + | chr8.2:4974648-4974667 | None:intergenic | 40.0% |
! | CTCCATTTGGCTGCTTTAAA+TGG | - | chr8.2:4974646-4974665 | MS.gene018389:intron | 40.0% |
! | CTGCTTTAAATGGCCATACT+CGG | - | chr8.2:4974656-4974675 | MS.gene018389:intron | 40.0% |
! | CTTCAGCTATTGATTGCCAA+GGG | - | chr8.2:4976024-4976043 | MS.gene018389:intron | 40.0% |
! | CTTTTGGATGTTCTGCATCT+GGG | - | chr8.2:4973691-4973710 | MS.gene018389:CDS | 40.0% |
! | TCTTCAGCTATTGATTGCCA+AGG | - | chr8.2:4976023-4976042 | MS.gene018389:intron | 40.0% |
! | TCTTTTGGATGTTCTGCATC+TGG | - | chr8.2:4973690-4973709 | MS.gene018389:CDS | 40.0% |
! | TGAAGAAGCACACATGGATA+TGG | + | chr8.2:4975128-4975147 | None:intergenic | 40.0% |
! | TTTTGGATGTTCTGCATCTG+GGG | - | chr8.2:4973692-4973711 | MS.gene018389:CDS | 40.0% |
!! | AAATGGTGTTGTCATGTCTG+TGG | + | chr8.2:4978637-4978656 | None:intergenic | 40.0% |
!! | CTTGCAAGGTATTCGACTTT+TGG | - | chr8.2:4973786-4973805 | MS.gene018389:CDS | 40.0% |
!! | TTGACAAGATGTTCTGGTTC+TGG | - | chr8.2:4978831-4978850 | MS.gene018389:CDS | 40.0% |
!!! | AGATGTTCTGGTTCTGGTTT+TGG | - | chr8.2:4978837-4978856 | MS.gene018389:CDS | 40.0% |
AAAAACCCACTCAGACACCA+AGG | + | chr8.2:4975633-4975652 | None:intergenic | 45.0% | |
AAGCTTGCCAACATGGTCAT+TGG | - | chr8.2:4974446-4974465 | MS.gene018389:intron | 45.0% | |
ACTATACTGTGGCGACATAG+AGG | + | chr8.2:4978504-4978523 | None:intergenic | 45.0% | |
AGAGGACAAGCTATTGAACC+TGG | + | chr8.2:4978486-4978505 | None:intergenic | 45.0% | |
AGCTTGCCAACATGGTCATT+GGG | - | chr8.2:4974447-4974466 | MS.gene018389:intron | 45.0% | |
AGGACAAGCTATTGAACCTG+GGG | + | chr8.2:4978484-4978503 | None:intergenic | 45.0% | |
CAATCCGTTTCTACAGGAAG+TGG | - | chr8.2:4978915-4978934 | MS.gene018389:CDS | 45.0% | |
CATACGAAGTGGTGTTTGTG+AGG | - | chr8.2:4974858-4974877 | MS.gene018389:intron | 45.0% | |
CATGAACGAGCAACCATCAA+GGG | + | chr8.2:4976400-4976419 | None:intergenic | 45.0% | |
CGCTTGGTATATAGTCTGCA+AGG | + | chr8.2:4974696-4974715 | None:intergenic | 45.0% | |
CTAGTTTCTGCAGCAAGAGA+TGG | - | chr8.2:4973720-4973739 | MS.gene018389:CDS | 45.0% | |
CTCGTTCATGGCATAGAAGT+TGG | - | chr8.2:4976410-4976429 | MS.gene018389:intron | 45.0% | |
CTGACTGCTGAGAATGCAAA+TGG | - | chr8.2:4976054-4976073 | MS.gene018389:intron | 45.0% | |
CTTCCAGCTCATGCTATATG+AGG | + | chr8.2:4975512-4975531 | None:intergenic | 45.0% | |
CTTGTGCAAGGAACCAATGA+AGG | + | chr8.2:4978783-4978802 | None:intergenic | 45.0% | |
GAGGACAAGCTATTGAACCT+GGG | + | chr8.2:4978485-4978504 | None:intergenic | 45.0% | |
GCAACTGCACACTTTCAACA+TGG | + | chr8.2:4974942-4974961 | None:intergenic | 45.0% | |
GCATCCACTTCCTGTAGAAA+CGG | + | chr8.2:4978922-4978941 | None:intergenic | 45.0% | |
GTGTATCTCTTGCTTGAGTC+TGG | - | chr8.2:4973951-4973970 | MS.gene018389:CDS | 45.0% | |
TCCATTATGCAGCATGTGGT+GGG | - | chr8.2:4975863-4975882 | MS.gene018389:intron | 45.0% | |
TCTCAGGAATTATCGTGGTC+AGG | - | chr8.2:4973986-4974005 | MS.gene018389:CDS | 45.0% | |
TCTTCGACTTCAACCTCTAC+TGG | - | chr8.2:4977981-4978000 | MS.gene018389:intron | 45.0% | |
TGAGCTGCAGAGTAATGCAA+AGG | + | chr8.2:4973825-4973844 | None:intergenic | 45.0% | |
TTCCTAACAGAGAATGTGGC+TGG | - | chr8.2:4977302-4977321 | MS.gene018389:intron | 45.0% | |
TTGAACAAATCACGCTGGCA+CGG | - | chr8.2:4975365-4975384 | MS.gene018389:intron | 45.0% | |
TTGATGCAAGCTTGCCAACA+TGG | - | chr8.2:4974439-4974458 | MS.gene018389:intron | 45.0% | |
TTGCATTACTCTGCAGCTCA+TGG | - | chr8.2:4973825-4973844 | MS.gene018389:CDS | 45.0% | |
TTTAGATTGGGGGGTGAGAT+TGG | + | chr8.2:4975453-4975472 | None:intergenic | 45.0% | |
! | ACCAAGCGTCCCTAACTTTT+GGG | - | chr8.2:4974708-4974727 | MS.gene018389:intron | 45.0% |
! | AGTTTGTTTGCCTTTGCGCT+GGG | + | chr8.2:4976959-4976978 | None:intergenic | 45.0% |
! | CAATGTCTGGTGGTGAGAAA+GGG | + | chr8.2:4977877-4977896 | None:intergenic | 45.0% |
! | CTGCATATGGCAGCATTGAA+TGG | - | chr8.2:4974916-4974935 | MS.gene018389:intron | 45.0% |
! | GACAGCAGCTTTGGTCTTTA+TGG | - | chr8.2:4976618-4976637 | MS.gene018389:intron | 45.0% |
! | GGCCATTTAAAGCAGCCAAA+TGG | + | chr8.2:4974651-4974670 | None:intergenic | 45.0% |
! | TACCAAGCGTCCCTAACTTT+TGG | - | chr8.2:4974707-4974726 | MS.gene018389:intron | 45.0% |
! | TGAAAGTGTGCAGTTGCTCT+TGG | - | chr8.2:4974945-4974964 | MS.gene018389:intron | 45.0% |
! | TTCGGCTGGAGGTTCTTTTA+AGG | + | chr8.2:4976446-4976465 | None:intergenic | 45.0% |
! | TTGAAGATGGACTCCCTTGA+TGG | - | chr8.2:4976384-4976403 | MS.gene018389:intron | 45.0% |
!! | ATGGCATAGAAGTTGGCTTG+AGG | - | chr8.2:4976417-4976436 | MS.gene018389:intron | 45.0% |
!! | TAGTTTGTTTGCCTTTGCGC+TGG | + | chr8.2:4976960-4976979 | None:intergenic | 45.0% |
!! | TTTGGTAGTGGTCTTGTGTC+TGG | + | chr8.2:4978543-4978562 | None:intergenic | 45.0% |
AATGGCCAGGGTGTGTATGT+AGG | + | chr8.2:4975192-4975211 | None:intergenic | 50.0% | |
AGGCAAATCGCGGAGAATAG+TGG | + | chr8.2:4974248-4974267 | None:intergenic | 50.0% | |
CCAAACCTACATACACACCC+TGG | - | chr8.2:4975184-4975203 | MS.gene018389:intron | 50.0% | |
CCACTCCATTATGCAGCATG+TGG | - | chr8.2:4975859-4975878 | MS.gene018389:intron | 50.0% | |
CCAGGGTGTGTATGTAGGTT+TGG | + | chr8.2:4975187-4975206 | None:intergenic | 50.0% | |
CCATGAACGAGCAACCATCA+AGG | + | chr8.2:4976401-4976420 | None:intergenic | 50.0% | |
CTAACAGAGAATGTGGCTGG+AGG | - | chr8.2:4977305-4977324 | MS.gene018389:intron | 50.0% | |
CTCCAGCCACATTCTCTGTT+AGG | + | chr8.2:4977307-4977326 | None:intergenic | 50.0% | |
CTCCATTATGCAGCATGTGG+TGG | - | chr8.2:4975862-4975881 | MS.gene018389:intron | 50.0% | |
GAGATTGGCAGAATCACGGA+GGG | + | chr8.2:4975438-4975457 | None:intergenic | 50.0% | |
GGACAAGCTATTGAACCTGG+GGG | + | chr8.2:4978483-4978502 | None:intergenic | 50.0% | |
GGGTGAGATTGGCAGAATCA+CGG | + | chr8.2:4975442-4975461 | None:intergenic | 50.0% | |
GTCGAATACCTTGCAAGACG+TGG | + | chr8.2:4973783-4973802 | None:intergenic | 50.0% | |
GTGCAGTTGCTCTTGGACTT+GGG | - | chr8.2:4974952-4974971 | MS.gene018389:intron | 50.0% | |
GTTTGTTTGCCTTTGCGCTG+GGG | + | chr8.2:4976958-4976977 | None:intergenic | 50.0% | |
TCCATCCTCTACGGTAACCT+CGG | + | chr8.2:4974989-4975008 | None:intergenic | 50.0% | |
TCCCAAAAGTTAGGGACGCT+TGG | + | chr8.2:4974712-4974731 | None:intergenic | 50.0% | |
TCCCACCACATGCTGCATAA+TGG | + | chr8.2:4975867-4975886 | None:intergenic | 50.0% | |
TGAGATTGGCAGAATCACGG+AGG | + | chr8.2:4975439-4975458 | None:intergenic | 50.0% | |
TGTGCAGTTGCTCTTGGACT+TGG | - | chr8.2:4974951-4974970 | MS.gene018389:intron | 50.0% | |
TTAGCCGAATGCACCGAGTA+TGG | + | chr8.2:4974672-4974691 | None:intergenic | 50.0% | |
TTGCCAACATGGTCATTGGG+AGG | - | chr8.2:4974450-4974469 | MS.gene018389:intron | 50.0% | |
! | CCACATGCTGCATAATGGAG+TGG | + | chr8.2:4975862-4975881 | None:intergenic | 50.0% |
! | CCTTGATGGTTGCTCGTTCA+TGG | - | chr8.2:4976398-4976417 | MS.gene018389:intron | 50.0% |
! | GCAATGTCTGGTGGTGAGAA+AGG | + | chr8.2:4977878-4977897 | None:intergenic | 50.0% |
! | TGGTGATGTTCAAGAGGCGA+AGG | - | chr8.2:4973740-4973759 | MS.gene018389:CDS | 50.0% |
!! | ATGGCCATACTCGGTGCATT+CGG | - | chr8.2:4974665-4974684 | MS.gene018389:intron | 50.0% |
ACAAGAACACATGGTCCCCC+AGG | - | chr8.2:4978465-4978484 | MS.gene018389:intron | 55.0% | |
AGCAGTCAGACTAGCACCCT+TGG | + | chr8.2:4976043-4976062 | None:intergenic | 55.0% | |
AGGCATCACTGCGCTGCATA+TGG | - | chr8.2:4974903-4974922 | MS.gene018389:intron | 55.0% | |
ATACCGGCACTGTAGCGTAG+CGG | - | chr8.2:4974210-4974229 | MS.gene018389:intron | 55.0% | |
ATTCCGCTACGCTACAGTGC+CGG | + | chr8.2:4974216-4974235 | None:intergenic | 55.0% | |
CAAGTCAACTAGCAGCCAGC+AGG | - | chr8.2:4976738-4976757 | MS.gene018389:CDS | 55.0% | |
CCAACATGGTCATTGGGAGG+TGG | - | chr8.2:4974453-4974472 | MS.gene018389:intron | 55.0% | |
CCACCTCCCAATGACCATGT+TGG | + | chr8.2:4974456-4974475 | None:intergenic | 55.0% | |
TCCGAGGTTACCGTAGAGGA+TGG | - | chr8.2:4974985-4975004 | MS.gene018389:intron | 55.0% | |
TGTGTCCGAGGTTACCGTAG+AGG | - | chr8.2:4974981-4975000 | MS.gene018389:intron | 55.0% | |
!! | CACAGCCTTGGTGTCTGAGT+GGG | - | chr8.2:4975625-4975644 | MS.gene018389:intron | 55.0% |
!! | CTACGCTACAGTGCCGGTAT+AGG | + | chr8.2:4974210-4974229 | None:intergenic | 55.0% |
!! | TGGAGGTACTGCCCTCCATT+TGG | - | chr8.2:4974633-4974652 | MS.gene018389:intron | 55.0% |
CTTGGGAGCTTCTGTGTCCG+AGG | - | chr8.2:4974969-4974988 | MS.gene018389:intron | 60.0% | |
GGAGGGCAGTACCTCCATTC+AGG | + | chr8.2:4974630-4974649 | None:intergenic | 60.0% | |
GTCAACTAGCAGCCAGCAGG+TGG | - | chr8.2:4976741-4976760 | MS.gene018389:CDS | 60.0% | |
TGCAGCTCATGGCCACCATG+AGG | - | chr8.2:4973836-4973855 | MS.gene018389:CDS | 60.0% | |
TGGAGAGATCCCCAGCGCAA+AGG | - | chr8.2:4976946-4976965 | MS.gene018389:intron | 60.0% | |
!! | GCACAGCCTTGGTGTCTGAG+TGG | - | chr8.2:4975624-4975643 | MS.gene018389:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 4973663 | 4978944 | 4973663 | ID=MS.gene018389 |
chr8.2 | mRNA | 4973663 | 4978944 | 4973663 | ID=MS.gene018389.t1;Parent=MS.gene018389 |
chr8.2 | exon | 4978750 | 4978944 | 4978750 | ID=MS.gene018389.t1.exon1;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4978750 | 4978944 | 4978750 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4978600 | 4978659 | 4978600 | ID=MS.gene018389.t1.exon2;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4978600 | 4978659 | 4978600 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4978103 | 4978174 | 4978103 | ID=MS.gene018389.t1.exon3;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4978103 | 4978174 | 4978103 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4977828 | 4977997 | 4977828 | ID=MS.gene018389.t1.exon4;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4977828 | 4977997 | 4977828 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4977580 | 4977740 | 4977580 | ID=MS.gene018389.t1.exon5;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4977580 | 4977740 | 4977580 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4976704 | 4976762 | 4976704 | ID=MS.gene018389.t1.exon6;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4976704 | 4976762 | 4976704 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4976531 | 4976577 | 4976531 | ID=MS.gene018389.t1.exon7;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4976531 | 4976577 | 4976531 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4976077 | 4976217 | 4976077 | ID=MS.gene018389.t1.exon8;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4976077 | 4976217 | 4976077 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4975204 | 4975295 | 4975204 | ID=MS.gene018389.t1.exon9;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4975204 | 4975295 | 4975204 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
chr8.2 | exon | 4973663 | 4974204 | 4973663 | ID=MS.gene018389.t1.exon10;Parent=MS.gene018389.t1 |
chr8.2 | CDS | 4973663 | 4974204 | 4973663 | ID=cds.MS.gene018389.t1;Parent=MS.gene018389.t1 |
Gene Sequence |
Protein sequence |