AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012456

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012456.t1 MTR_4g129470 97.461 512 10 1 1 512 1 509 0.0 1026
MS.gene012456.t1 MTR_4g129470 96.934 424 10 1 89 512 1 421 0.0 845
MS.gene012456.t1 MTR_1g100797 59.057 403 150 4 7 401 1 396 6.07e-165 477
MS.gene012456.t1 MTR_0020s0130 58.561 403 152 5 7 401 1 396 7.23e-162 469
MS.gene012456.t1 MTR_1g100797 54.362 298 121 4 112 401 2 292 1.39e-103 317
MS.gene012456.t1 MTR_2g096760 31.188 404 216 11 7 376 1 376 8.43e-42 155
MS.gene012456.t1 MTR_4g063830 29.798 396 223 9 11 376 6 376 5.47e-36 139
MS.gene012456.t1 MTR_4g021880 27.646 463 251 12 20 449 101 512 1.45e-32 130
MS.gene012456.t1 MTR_4g021880 30.627 271 161 5 20 288 101 346 1.08e-22 100
MS.gene012456.t1 MTR_6g027840 28.279 244 129 8 54 266 246 474 9.21e-16 80.5
MS.gene012456.t1 MTR_1g089180 29.082 196 115 6 53 245 255 429 1.83e-14 75.9
MS.gene012456.t1 MTR_7g031370 29.515 227 117 7 40 265 436 620 1.90e-13 73.6
MS.gene012456.t1 MTR_7g031370 29.515 227 117 7 40 265 276 460 2.13e-13 73.2
MS.gene012456.t1 MTR_4g092760 26.295 251 132 7 20 262 27 232 1.55e-12 70.1
MS.gene012456.t1 MTR_7g100390 27.106 273 157 8 20 288 53 287 3.33e-12 69.3
MS.gene012456.t1 MTR_5g043640 31.818 154 77 6 122 262 58 196 3.37e-12 67.0
MS.gene012456.t1 MTR_5g077770 29.694 229 113 9 24 249 563 746 3.65e-12 69.3
MS.gene012456.t1 MTR_5g019105 93.103 29 2 0 239 267 28 56 6.03e-12 61.2
MS.gene012456.t1 MTR_1g115575 28.409 264 135 9 9 264 128 345 4.00e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012456.t1 AT5G57740 65.318 519 155 12 1 509 1 504 0.0 633
MS.gene012456.t1 AT5G07270 56.635 422 175 4 7 427 1 415 1.47e-164 476
MS.gene012456.t1 AT2G28840 31.343 402 217 11 7 376 1 375 1.70e-36 141
MS.gene012456.t1 AT2G28840 31.250 336 173 10 72 376 53 361 1.76e-26 112
MS.gene012456.t1 AT5G14230 28.571 266 149 9 39 266 329 591 4.60e-16 81.6
MS.gene012456.t1 AT5G14230 28.522 291 138 10 23 262 348 619 5.76e-13 72.0
MS.gene012456.t1 AT5G14230 28.352 261 147 8 39 262 169 426 7.78e-16 80.9
MS.gene012456.t1 AT5G14230 28.522 291 138 10 23 262 188 459 7.15e-13 71.6
MS.gene012456.t1 AT2G31820 30.645 248 130 10 46 288 217 427 9.21e-15 77.4
MS.gene012456.t1 AT3G12360 31.496 254 121 10 9 257 114 319 1.03e-13 73.9
MS.gene012456.t1 AT3G12360 31.496 254 121 10 9 257 126 331 1.06e-13 73.9
MS.gene012456.t1 AT3G04710 28.251 223 123 6 55 262 283 483 5.96e-13 72.0
MS.gene012456.t1 AT3G04710 27.753 227 127 6 51 262 55 259 1.44e-12 70.1
MS.gene012456.t1 AT1G07710 30.315 254 132 10 16 263 65 279 1.48e-12 70.5
MS.gene012456.t1 AT1G07710 30.315 254 132 10 16 263 65 279 1.48e-12 70.5
MS.gene012456.t1 AT1G05640 29.536 237 129 7 54 288 191 391 4.92e-12 68.9
MS.gene012456.t1 AT1G05640 31.313 198 117 7 23 207 195 386 4.10e-11 65.9
MS.gene012456.t1 AT5G02620 29.885 174 93 4 23 195 98 243 5.83e-12 68.6
MS.gene012456.t1 AT5G02620 26.271 236 142 9 52 268 18 240 6.54e-11 65.1
MS.gene012456.t1 AT5G02620 29.885 174 93 4 23 195 98 243 5.83e-12 68.6
MS.gene012456.t1 AT5G02620 26.271 236 142 9 52 268 18 240 6.54e-11 65.1
MS.gene012456.t1 AT2G03430 32.895 152 84 4 117 260 46 187 1.02e-11 65.5
MS.gene012456.t1 AT5G02620 25.097 259 162 9 35 274 1 246 2.07e-11 66.6
MS.gene012456.t1 AT5G02620 25.097 259 162 9 35 274 1 246 2.07e-11 66.6
MS.gene012456.t1 AT5G02620 25.097 259 162 9 35 274 1 246 2.07e-11 66.6
MS.gene012456.t1 AT3G04710 27.753 227 126 7 51 262 55 258 3.41e-11 65.9
MS.gene012456.t1 AT2G14255 28.646 192 101 4 50 241 90 245 4.11e-11 65.9
MS.gene012456.t1 AT3G09550 28.033 239 127 6 53 285 145 344 5.74e-11 65.5
MS.gene012456.t1 AT3G09550 28.033 239 127 6 53 285 145 344 5.74e-11 65.5
MS.gene012456.t1 AT3G09550 28.033 239 127 6 53 285 152 351 6.04e-11 65.5
MS.gene012456.t1 AT5G60070 28.319 226 123 9 23 245 115 304 8.89e-11 64.7

Find 122 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGAAGGGGAAGAAAATT+TGG 0.191675 8.3:+2076990 None:intergenic
CTCCATTTGGCTGCTTTAAA+TGG 0.204812 8.3:-2081020 MS.gene012456:CDS
GGAACTACTATTGATTTAAT+TGG 0.211124 8.3:-2080660 MS.gene012456:intron
AGTCTGGTTGGGAATTCTTT+TGG 0.215532 8.3:-2081964 MS.gene012456:CDS
TTGGATCCACGTGAAGTTAT+TGG 0.227928 8.3:+2077009 None:intergenic
AGATGTTCTGGTTCTGGTTT+TGG 0.245396 8.3:-2076835 MS.gene012456:CDS
TACCAAGCATCCCTAACTTT+TGG 0.247113 8.3:-2080959 MS.gene012456:CDS
TTGACAAGATGTTCTGGTTC+TGG 0.258460 8.3:-2076841 MS.gene012456:CDS
CTTGCAAGGTATTCGACTTT+TGG 0.271778 8.3:-2081853 MS.gene012456:CDS
TGTAATATATCCCAAAAGTT+AGG 0.292151 8.3:+2080948 None:intergenic
CCTTGATGGTTGCTCGTTCA+TGG 0.299512 8.3:-2079268 MS.gene012456:CDS
GAAGTTATTGGTTTGCAAAA+TGG 0.338692 8.3:+2077021 None:intergenic
CTCAACTCTAGTCTTTGTTT+AGG 0.346862 8.3:-2076928 MS.gene012456:CDS
AACCATTTGACAAGATGTTC+TGG 0.351599 8.3:-2076847 MS.gene012456:CDS
GTTTGTGGAACATAGGTATA+AGG 0.361530 8.3:+2077239 None:intergenic
AGATCCATGTGCAGTTTGTT+TGG 0.362914 8.3:-2078312 MS.gene012456:CDS
AGCTGATGTTACTCCTTCAT+TGG 0.369879 8.3:-2076905 MS.gene012456:CDS
TTTGGTAGTGGTCTTGTGTC+TGG 0.372671 8.3:+2077132 None:intergenic
GGAGGGCAGTACCTCCATTC+AGG 0.376256 8.3:+2081039 None:intergenic
TGGAGGTACTGCCCTCCATT+TGG 0.397991 8.3:-2081033 MS.gene012456:CDS
GTTGTCCTTTGCATTACTTT+TGG 0.399471 8.3:+2077114 None:intergenic
TGTGCAGTTGCTCTTGGACT+TGG 0.405253 8.3:-2080715 MS.gene012456:CDS
TGAAATTTCTAAGTCTGGTT+GGG 0.412874 8.3:-2081975 MS.gene012456:CDS
TTCCACCACATGCTGCATAA+TGG 0.413335 8.3:+2079802 None:intergenic
AAATGTATGGTCGCTGTAGA+AGG 0.413383 8.3:-2078284 MS.gene012456:intron
GAACATGAAATTTCTAAGTC+TGG 0.415403 8.3:-2081980 None:intergenic
AAGCTTGCCAACATGGTCAT+TGG 0.417509 8.3:-2081220 MS.gene012456:CDS
AAGGAACGAAATCTTCTTGA+AGG 0.425532 8.3:+2076976 None:intergenic
AGCTTGCCAACATGGTCATT+GGG 0.431325 8.3:-2081219 MS.gene012456:CDS
TGAAAGTGTGCAGTTGCTCT+TGG 0.431844 8.3:-2080721 MS.gene012456:CDS
CTGAGAGAAGGAAATCATCT+TGG 0.432039 8.3:-2076795 MS.gene012456:CDS
GTGTATCTATTGCTTGAGTC+TGG 0.433773 8.3:-2081688 MS.gene012456:CDS
TTGAAGATGGACTCCCTTGA+TGG 0.437882 8.3:-2079282 MS.gene012456:intron
ACGTGTTCAAGTGAAGTTCT+TGG 0.438387 8.3:-2077066 MS.gene012456:CDS
CTCGTTCATGGCATAGAAGT+TGG 0.441525 8.3:-2079256 MS.gene012456:CDS
TCTTGTTGAAGTTGAGTTTG+TGG 0.446504 8.3:+2077224 None:intergenic
ATGAAATTTCTAAGTCTGGT+TGG 0.447499 8.3:-2081976 MS.gene012456:CDS
GTGCAGTTGCTCTTGGACTT+GGG 0.447704 8.3:-2080714 MS.gene012456:CDS
ATGGCCACACTCGGTGCATT+CGG 0.448422 8.3:-2081001 MS.gene012456:CDS
AGGCATCACTGCGCTGCATA+TGG 0.449962 8.3:-2080763 MS.gene012456:CDS
ATAAGTGGAAGAGATATATA+TGG 0.450125 8.3:+2079179 None:intergenic
CTGCATATGGCAGCATTGAA+TGG 0.451201 8.3:-2080750 MS.gene012456:CDS
TTCAATCAATCCGTTTCTAC+AGG 0.452780 8.3:-2076763 MS.gene012456:CDS
CTGACTGCTGAGAATGCAAA+TGG 0.460225 8.3:-2079612 MS.gene012456:CDS
TGAACACGTGCAAAATGTTA+AGG 0.461338 8.3:+2077080 None:intergenic
TTGCATTACTCTGCAGCTCA+TGG 0.463642 8.3:-2081814 MS.gene012456:CDS
TTGTTTGGAAAGGAAATGTA+TGG 0.464104 8.3:-2078297 MS.gene012456:CDS
CATACGAAGTGGTGTTTATG+AGG 0.467925 8.3:-2080808 MS.gene012456:intron
AAGTTGAGTTTGTGGAACAT+AGG 0.477507 8.3:+2077232 None:intergenic
GCACATGGATCTAAGCATAT+AGG 0.478105 8.3:+2078323 None:intergenic
CTTTCCAAACAAACTGCACA+TGG 0.481712 8.3:+2078308 None:intergenic
AACCAGAACATCTTGTCAAA+TGG 0.484480 8.3:+2076845 None:intergenic
CAATCCGTTTCTACAGGAAG+TGG 0.491465 8.3:-2076757 MS.gene012456:CDS
TCTCAGGAATTATCGTGGTC+AGG 0.491654 8.3:-2081653 MS.gene012456:intron
CATAAAACAGATTACCTGAA+TGG 0.493768 8.3:-2081053 MS.gene012456:CDS
GCATCCACTTCCTGTAGAAA+CGG 0.494458 8.3:+2076753 None:intergenic
GTAATATATCCCAAAAGTTA+GGG 0.497275 8.3:+2080949 None:intergenic
TCCCAAAAGTTAGGGATGCT+TGG 0.498090 8.3:+2080957 None:intergenic
CTGGTGTTGATATCAATCTC+AGG 0.506277 8.3:-2081669 MS.gene012456:CDS
CATGTGCAGTTTGTTTGGAA+AGG 0.507634 8.3:-2078307 MS.gene012456:CDS
CTGCTTTAAATGGCCACACT+CGG 0.515527 8.3:-2081010 MS.gene012456:CDS
GGCCATTTAAAGCAGCCAAA+TGG 0.517006 8.3:+2081018 None:intergenic
CCAACATGGTCATTGGGAGG+TGG 0.519366 8.3:-2081213 MS.gene012456:CDS
TTCCTAACAGAGAATGTGGC+TGG 0.520240 8.3:-2078364 MS.gene012456:intron
GTAATTAACAAAACTTCTGA+TGG 0.523746 8.3:-2080786 MS.gene012456:CDS
AGCAGTCAGACTAGCACCCT+TGG 0.529380 8.3:+2079626 None:intergenic
TCTTCAGCTATTGATTGCCA+AGG 0.531671 8.3:-2079643 MS.gene012456:intron
CTTGTGCAAGGAACCAATGA+AGG 0.533363 8.3:+2076892 None:intergenic
CATTTAAAGCAGCCAAATGG+AGG 0.534539 8.3:+2081021 None:intergenic
TGAAGAGAATTGACAACTCA+AGG 0.535842 8.3:+2076957 None:intergenic
AGAGGACAAGCTATTGAACC+TGG 0.537680 8.3:+2077189 None:intergenic
AGGAACGAAATCTTCTTGAA+GGG 0.546898 8.3:+2076977 None:intergenic
TGAGCATTGTCAAAATTGCT+AGG 0.550320 8.3:-2079157 MS.gene012456:intron
CTAGTTTCTGCAGCAAGAGA+TGG 0.552390 8.3:-2081919 MS.gene012456:CDS
GGAAGAGATATATATGGCGA+AGG 0.561512 8.3:+2079185 None:intergenic
CTTCAGCTATTGATTGCCAA+GGG 0.565183 8.3:-2079642 MS.gene012456:intron
CTCCATTATGCAGCATGTGG+TGG 0.571888 8.3:-2079804 MS.gene012456:CDS
AATATAATCCACGTCTTGCA+AGG 0.572310 8.3:-2081867 MS.gene012456:CDS
CCATGAACGAGCAACCATCA+AGG 0.576241 8.3:+2079268 None:intergenic
CTTCTATTAGCACTTGTGCA+AGG 0.580799 8.3:+2076880 None:intergenic
CAAGTTCTCAAACTGAGAGA+AGG 0.581676 8.3:-2076807 MS.gene012456:CDS
ACTATACTGTGGCGACATAG+AGG 0.581953 8.3:+2077171 None:intergenic
TGCAAACCAATAACTTCACG+TGG 0.583478 8.3:-2077015 MS.gene012456:CDS
AATAGTAGTTCCATCCTCTA+CGG 0.584436 8.3:+2080671 None:intergenic
GTCGAATACCTTGCAAGACG+TGG 0.585836 8.3:+2081859 None:intergenic
CATGAACGAGCAACCATCAA+GGG 0.589970 8.3:+2079269 None:intergenic
CTTGGGAGCTTCTGTGTCCG+AGG 0.591035 8.3:-2080697 MS.gene012456:CDS
TCCGAGGTTACCGTAGAGGA+TGG 0.591591 8.3:-2080681 MS.gene012456:CDS
TGGTGATGTTCAAGAGGCGA+AGG 0.592755 8.3:-2081899 MS.gene012456:CDS
TCAATTCCTAACAGAGAATG+TGG 0.598490 8.3:-2078368 MS.gene012456:intron
TTGATGCAAGCTTGCCAACA+TGG 0.601264 8.3:-2081227 MS.gene012456:CDS
TGCTTGGTATATAGTCTGCA+AGG 0.603623 8.3:+2080973 None:intergenic
CACTACCAAAAGTAATGCAA+AGG 0.606802 8.3:-2077119 MS.gene012456:CDS
ATTAACAAAACTTCTGATGG+AGG 0.611011 8.3:-2080783 MS.gene012456:CDS
GAGGACAAGCTATTGAACCT+GGG 0.612469 8.3:+2077190 None:intergenic
CCACCTCCCAATGACCATGT+TGG 0.614473 8.3:+2081213 None:intergenic
TCCATCCTCTACGGTAACCT+CGG 0.615721 8.3:+2080680 None:intergenic
GGAACGAAATCTTCTTGAAG+GGG 0.616699 8.3:+2076978 None:intergenic
AAGAGATGGTGATGTTCAAG+AGG 0.619180 8.3:-2081905 MS.gene012456:CDS
CAATCTCAGAATTTGATCAA+AGG 0.622386 8.3:-2080908 MS.gene012456:intron
ATGGCATAGAAGTTGGCTTG+AGG 0.627590 8.3:-2079249 MS.gene012456:CDS
TGTGTCCGAGGTTACCGTAG+AGG 0.631676 8.3:-2080685 MS.gene012456:CDS
ATTTAAAGCAGCCAAATGGA+GGG 0.637897 8.3:+2081022 None:intergenic
TGACTGCTGAGAATGCAAAT+GGG 0.638673 8.3:-2079611 MS.gene012456:intron
TTAGCCGAATGCACCGAGTG+TGG 0.645924 8.3:+2080997 None:intergenic
TCAACTTCAACAAGAACACA+TGG 0.651528 8.3:-2077216 MS.gene012456:CDS
AGGACAAGCTATTGAACCTG+GGG 0.651920 8.3:+2077191 None:intergenic
CCACTCCATTATGCAGCATG+TGG 0.652184 8.3:-2079807 MS.gene012456:CDS
AAATGGTGTTGTCATGTCTG+TGG 0.653781 8.3:+2077038 None:intergenic
GTGCTAATAGAAGAAACTTG+AGG 0.655442 8.3:-2076870 MS.gene012456:CDS
TGAGCTGCAGAGTAATGCAA+AGG 0.656866 8.3:+2081817 None:intergenic
ATCAATCTCAGGAATTATCG+TGG 0.664087 8.3:-2081658 MS.gene012456:CDS
CCACATGCTGCATAATGGAG+TGG 0.665634 8.3:+2079807 None:intergenic
ACGTGGATTATATTCTAACA+AGG 0.672327 8.3:+2081876 None:intergenic
TTGCCAACATGGTCATTGGG+AGG 0.672352 8.3:-2081216 MS.gene012456:CDS
AAAACAGATTACCTGAATGG+AGG 0.674826 8.3:-2081050 MS.gene012456:CDS
GCAACTGCACACTTTCAACA+TGG 0.678568 8.3:+2080727 None:intergenic
TGCAGCTCATGGCCACCATG+AGG 0.682766 8.3:-2081803 MS.gene012456:intron
CTAACAGAGAATGTGGCTGG+AGG 0.704497 8.3:-2078361 MS.gene012456:intron
TGCAAGTATATACCTCATGG+TGG 0.726864 8.3:+2081791 None:intergenic
GGACAAGCTATTGAACCTGG+GGG 0.729015 8.3:+2077192 None:intergenic
TAACAAATGAGACTATACTG+TGG 0.749737 8.3:+2077160 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTACATATATTAAGTAAT+TGG - chr8.3:2080682-2080701 MS.gene012456:CDS 10.0%
!! TACTCAAATTTATATTTATT+TGG - chr8.3:2079908-2079927 MS.gene012456:intron 10.0%
!! AAAGACATCAAAATATAAAA+TGG + chr8.3:2081019-2081038 None:intergenic 15.0%
!! AACATTTATAGAATTCAATT+AGG - chr8.3:2078760-2078779 MS.gene012456:intron 15.0%
!! AAGGTTATTAATTAAATGTT+AGG + chr8.3:2079640-2079659 None:intergenic 15.0%
!! AATATAGTAAATGTTTAGAT+TGG + chr8.3:2078526-2078545 None:intergenic 15.0%
!! ACATTAGAAATTATTGTTAT+TGG - chr8.3:2081343-2081362 MS.gene012456:intron 15.0%
!! ACATTGAAACAAAATAATAT+TGG + chr8.3:2077103-2077122 None:intergenic 15.0%
!! ATATAGTAAATGTTTAGATT+GGG + chr8.3:2078525-2078544 None:intergenic 15.0%
!! TAAAAACTTCATAATCTAAT+AGG + chr8.3:2080188-2080207 None:intergenic 15.0%
!! TTAATATAATAGCACAAAAT+CGG + chr8.3:2077587-2077606 None:intergenic 15.0%
!!! TAAAATATTGCTTGTTAAAT+TGG - chr8.3:2077640-2077659 MS.gene012456:intron 15.0%
!!! TATTAAAACAATTTTTCACA+TGG + chr8.3:2079710-2079729 None:intergenic 15.0%
!! AATATAAAATGGAAGAGAAA+AGG + chr8.3:2081008-2081027 None:intergenic 20.0%
!! ACAATAATTTCTAATGTCAT+AGG + chr8.3:2081340-2081359 None:intergenic 20.0%
!! AGCAAATAATTAGAAAGTAA+TGG - chr8.3:2080756-2080775 MS.gene012456:CDS 20.0%
!! ATAACTAACTTACTTTACAA+TGG - chr8.3:2078336-2078355 MS.gene012456:CDS 20.0%
!! ATTAAATGTTAGGAAGAAAT+TGG + chr8.3:2079630-2079649 None:intergenic 20.0%
!! TATAGTAAATGTTTAGATTG+GGG + chr8.3:2078524-2078543 None:intergenic 20.0%
!! TGAACAAATATAGCATTATT+TGG + chr8.3:2080159-2080178 None:intergenic 20.0%
!! TTATGATCTATTTAGATCAT+AGG - chr8.3:2079222-2079241 MS.gene012456:CDS 20.0%
!!! AATTTCTACTAGAGTATTTT+GGG + chr8.3:2081136-2081155 None:intergenic 20.0%
!!! AGCATCATTTGATTTTAATA+AGG - chr8.3:2079736-2079755 MS.gene012456:intron 20.0%
!!! ATATGATAAATTGATAATGC+AGG - chr8.3:2081435-2081454 MS.gene012456:intron 20.0%
!!! ATGTTTTTTCCATTTGTTTT+TGG + chr8.3:2080802-2080821 None:intergenic 20.0%
!!! ATTGGCTTTAAAAATAATCA+AGG + chr8.3:2077545-2077564 None:intergenic 20.0%
!!! TAGTATCGTAGAATTTTATT+CGG + chr8.3:2079879-2079898 None:intergenic 20.0%
!!! TATTGATTTTGTTTTGAAGA+TGG - chr8.3:2079431-2079450 MS.gene012456:intron 20.0%
!!! TATTTTTATTTACAGGTTCT+GGG - chr8.3:2078890-2078909 MS.gene012456:intron 20.0%
!!! TCAAATTTTATGTATTCCAA+AGG - chr8.3:2080294-2080313 MS.gene012456:intron 20.0%
!!! TGCTATCTATTTTTATTTAC+AGG - chr8.3:2078883-2078902 MS.gene012456:intron 20.0%
! AAAATGAAACAGTCTTCTAA+AGG + chr8.3:2078982-2079001 None:intergenic 25.0%
! AAAATGCTTCATGTTTAAAG+CGG - chr8.3:2078827-2078846 MS.gene012456:intron 25.0%
! AACTGATTATACTTTGAATG+CGG - chr8.3:2079828-2079847 MS.gene012456:intron 25.0%
! AAGTTAATTCTGTCTTTGAA+TGG - chr8.3:2077892-2077911 MS.gene012456:intron 25.0%
! AATGTGTAGAATGTAGATAA+TGG + chr8.3:2078632-2078651 None:intergenic 25.0%
! ACACTAAACCAATATTGTTA+AGG - chr8.3:2081300-2081319 MS.gene012456:intron 25.0%
! AGATATGGTCTACTAAATTA+AGG + chr8.3:2077132-2077151 None:intergenic 25.0%
! AGATCAAACTAGTTAACTTA+GGG + chr8.3:2078855-2078874 None:intergenic 25.0%
! AGATCAATAATAGTAACCTT+TGG + chr8.3:2080313-2080332 None:intergenic 25.0%
! ATAAGTGGAAGAGATATATA+TGG + chr8.3:2079550-2079569 None:intergenic 25.0%
! ATAGTAAATGTTTAGATTGG+GGG + chr8.3:2078523-2078542 None:intergenic 25.0%
! CATATATTAAGTAATTGGTC+AGG - chr8.3:2080687-2080706 MS.gene012456:CDS 25.0%
! CATCAATATTGTTCAACATT+TGG - chr8.3:2078275-2078294 MS.gene012456:intron 25.0%
! GAATAAAATTCTACGATACT+AGG - chr8.3:2079878-2079897 MS.gene012456:intron 25.0%
! GCATTGAGTGTAAATTAAAA+GGG + chr8.3:2080475-2080494 None:intergenic 25.0%
! GTAATATATCCCAAAAGTTA+GGG + chr8.3:2077780-2077799 None:intergenic 25.0%
! GTAATTAACAAAACTTCTGA+TGG - chr8.3:2077940-2077959 MS.gene012456:intron 25.0%
! TAAAAATAGATAGCAGTTAG+TGG + chr8.3:2078878-2078897 None:intergenic 25.0%
! TAACCTTTCAAGATTGATAT+TGG - chr8.3:2079653-2079672 MS.gene012456:intron 25.0%
! TAGATGAGTTTAGTCATTTA+AGG - chr8.3:2080052-2080071 MS.gene012456:intron 25.0%
! TCGTAGTAAGTTAAAAACAA+GGG + chr8.3:2079266-2079285 None:intergenic 25.0%
! TGAACAATATTGATGAGAAA+TGG + chr8.3:2078270-2078289 None:intergenic 25.0%
! TGTAATATATCCCAAAAGTT+AGG + chr8.3:2077781-2077800 None:intergenic 25.0%
! TTGCCAATAAAAATACAAAG+AGG + chr8.3:2081093-2081112 None:intergenic 25.0%
!! AGCATTGAGTGTAAATTAAA+AGG + chr8.3:2080476-2080495 None:intergenic 25.0%
!! ATTTTCTCTTATGTAGTACA+GGG + chr8.3:2078812-2078831 None:intergenic 25.0%
!! GAAATTGGTTGAATTTTGAA+AGG + chr8.3:2079615-2079634 None:intergenic 25.0%
!! TCTACTTTGAATGTATTTTC+TGG + chr8.3:2080598-2080617 None:intergenic 25.0%
!! TTAGAAGACTGTTTCATTTT+AGG - chr8.3:2078982-2079001 MS.gene012456:intron 25.0%
!! TTGGATATGTTTTCTACAAA+TGG - chr8.3:2080711-2080730 MS.gene012456:CDS 25.0%
!! TTTTACATGGAAAAATGATC+TGG - chr8.3:2080507-2080526 MS.gene012456:intron 25.0%
!!! ATGTAGATAATGGAATATGA+TGG + chr8.3:2078622-2078641 None:intergenic 25.0%
!!! ATTTTGCAAGTGTTTCTATA+TGG - chr8.3:2080892-2080911 MS.gene012456:intron 25.0%
!!! CAATTTCTACTAGAGTATTT+TGG + chr8.3:2081137-2081156 None:intergenic 25.0%
!!! CTACCTCTTTGTATTTTTAT+TGG - chr8.3:2081087-2081106 MS.gene012456:intron 25.0%
!!! CTATTTTTATTTACAGGTTC+TGG - chr8.3:2078889-2078908 MS.gene012456:intron 25.0%
!!! CTTCAAACTTTTGTTGTTTT+GGG - chr8.3:2077393-2077412 MS.gene012456:intron 25.0%
!!! GGAACTACTATTGATTTAAT+TGG - chr8.3:2078066-2078085 MS.gene012456:intron 25.0%
AACCTTTGAATCAATGGTAA+AGG - chr8.3:2080848-2080867 MS.gene012456:intron 30.0%
AAGAGGTAGATGACAAAATA+TGG + chr8.3:2081076-2081095 None:intergenic 30.0%
AAGTTAAAAACAAGGGGTAA+AGG + chr8.3:2079259-2079278 None:intergenic 30.0%
AATAAAAACTGAGCAATGTC+TGG + chr8.3:2080950-2080969 None:intergenic 30.0%
AATCAGCAGAAGATTAATCA+CGG + chr8.3:2077345-2077364 None:intergenic 30.0%
AATGACAACCTTTGAATCAA+TGG - chr8.3:2080842-2080861 MS.gene012456:intron 30.0%
AATTGCAAGTATATACCTCA+TGG + chr8.3:2076941-2076960 None:intergenic 30.0%
ACATAACTATGCTTCTTTGT+TGG - chr8.3:2080818-2080837 MS.gene012456:intron 30.0%
AGAGGTAGATGACAAAATAT+GGG + chr8.3:2081075-2081094 None:intergenic 30.0%
AGATTCACTATCTATCGTAT+TGG - chr8.3:2079285-2079304 MS.gene012456:intron 30.0%
ATCACTTAATCACATGAACT+AGG + chr8.3:2078108-2078127 None:intergenic 30.0%
ATGAAATTTCTAAGTCTGGT+TGG - chr8.3:2076750-2076769 MS.gene012456:CDS 30.0%
ATTAACAAAACTTCTGATGG+AGG - chr8.3:2077943-2077962 MS.gene012456:intron 30.0%
ATTTAGAAGTAGGTGAAAGA+GGG + chr8.3:2078718-2078737 None:intergenic 30.0%
CAACCAATATCAATCTTGAA+AGG + chr8.3:2079659-2079678 None:intergenic 30.0%
CAAGCACTATGTATCTTAAA+TGG - chr8.3:2079385-2079404 MS.gene012456:intron 30.0%
CAATCTCAGAATTTGATCAA+AGG - chr8.3:2077818-2077837 MS.gene012456:intron 30.0%
CATAAAACAGATTACCTGAA+TGG - chr8.3:2077673-2077692 MS.gene012456:intron 30.0%
CATGTGATTATGTGCATATT+TGG - chr8.3:2079939-2079958 MS.gene012456:intron 30.0%
CATTTATGCGACAATAGATA+TGG + chr8.3:2077147-2077166 None:intergenic 30.0%
CGTAGTAAGTTAAAAACAAG+GGG + chr8.3:2079265-2079284 None:intergenic 30.0%
CTCGTAGTAAGTTAAAAACA+AGG + chr8.3:2079267-2079286 None:intergenic 30.0%
CTTACTGCAACAGTTTATAA+TGG + chr8.3:2077875-2077894 None:intergenic 30.0%
CTTAGTAAACATTAGACAAG+AGG + chr8.3:2078665-2078684 None:intergenic 30.0%
GAGATCAAACTAGTTAACTT+AGG + chr8.3:2078856-2078875 None:intergenic 30.0%
GAGTTAGAGATCTTCAATAT+AGG - chr8.3:2079964-2079983 MS.gene012456:intron 30.0%
GATCAAACTAGTTAACTTAG+GGG + chr8.3:2078854-2078873 None:intergenic 30.0%
GTTTAGTGTTTGAATTGACA+AGG + chr8.3:2081289-2081308 None:intergenic 30.0%
TAACAAATGAGACTATACTG+TGG + chr8.3:2081569-2081588 None:intergenic 30.0%
TAACTTACTTTACAATGGCT+TGG - chr8.3:2078341-2078360 MS.gene012456:CDS 30.0%
TACTGCTAAGATTTAGAAGT+AGG + chr8.3:2078728-2078747 None:intergenic 30.0%
TAGTAAATGTTTAGATTGGG+GGG + chr8.3:2078522-2078541 None:intergenic 30.0%
TGAAATTTCTAAGTCTGGTT+GGG - chr8.3:2076751-2076770 MS.gene012456:CDS 30.0%
TGGCACAATAAAATTTGTAG+TGG - chr8.3:2078361-2078380 MS.gene012456:intron 30.0%
TTCTATATGGAGTTATTGCA+CGG - chr8.3:2080905-2080924 MS.gene012456:intron 30.0%
TTGCAAAATACGTTTCTCTA+TGG + chr8.3:2080881-2080900 None:intergenic 30.0%
TTGCAGAAATGATCTTACAT+TGG + chr8.3:2077563-2077582 None:intergenic 30.0%
TTGTTTGGAAAGGAAATGTA+TGG - chr8.3:2080429-2080448 MS.gene012456:intron 30.0%
! AACTTACCTTATTTACAGCT+TGG - chr8.3:2079180-2079199 MS.gene012456:CDS 30.0%
! ACGTGGATTATATTCTAACA+AGG + chr8.3:2076853-2076872 None:intergenic 30.0%
! AGGAAGAACTTGTACATTTT+CGG + chr8.3:2079524-2079543 None:intergenic 30.0%
! CATTTTCTCTTATGTAGTAC+AGG + chr8.3:2078813-2078832 None:intergenic 30.0%
! CTTTTCGAAACTTGCATAAT+TGG - chr8.3:2078213-2078232 MS.gene012456:intron 30.0%
! GTGTACGTTTGTTAAAATCA+TGG - chr8.3:2078469-2078488 MS.gene012456:intron 30.0%
! TACGTTTGTTAAAATCATGG+TGG - chr8.3:2078472-2078491 MS.gene012456:intron 30.0%
! TATAGGTTTTGCCAATACTT+TGG - chr8.3:2079981-2080000 MS.gene012456:intron 30.0%
! TTATTTTCCATGAACGTGTT+TGG - chr8.3:2080965-2080984 MS.gene012456:CDS 30.0%
! TTTTCAAATTATGCCTACTC+CGG - chr8.3:2077281-2077300 MS.gene012456:intron 30.0%
! TTTTCTCTTATGTAGTACAG+GGG + chr8.3:2078811-2078830 None:intergenic 30.0%
!! ATTTTGACAATGCTCATAAG+TGG + chr8.3:2079565-2079584 None:intergenic 30.0%
!! CTGATATAGATGGTTTTACA+TGG - chr8.3:2080494-2080513 MS.gene012456:intron 30.0%
!! GAAGTTATTGGTTTGCAAAA+TGG + chr8.3:2081708-2081727 None:intergenic 30.0%
!! GATAATGGAATATGATGGAA+AGG + chr8.3:2078617-2078636 None:intergenic 30.0%
!! GTTATTGGCTTAAAAAGTGT+TGG - chr8.3:2081358-2081377 MS.gene012456:intron 30.0%
!! TTCCTTTACCATTGATTCAA+AGG + chr8.3:2080853-2080872 None:intergenic 30.0%
!! TTGGTTGAATTTTGAAAGGA+TGG + chr8.3:2079611-2079630 None:intergenic 30.0%
!!! AACTTTTGTTGTTTTGGGTA+TGG - chr8.3:2077398-2077417 MS.gene012456:intron 30.0%
!!! GCTTCAAACTTTTGTTGTTT+TGG - chr8.3:2077392-2077411 MS.gene012456:intron 30.0%
!!! TTTTGGGATATATTACAGAC+AGG - chr8.3:2077784-2077803 MS.gene012456:intron 30.0%
AAAACAGATTACCTGAATGG+AGG - chr8.3:2077676-2077695 MS.gene012456:intron 35.0%
AAACACGATGCAAGAAAATG+AGG + chr8.3:2076971-2076990 None:intergenic 35.0%
AACATGCCAAGCTGTAAATA+AGG + chr8.3:2079189-2079208 None:intergenic 35.0%
AACCAGAACATCTTGTCAAA+TGG + chr8.3:2081884-2081903 None:intergenic 35.0%
AACCATTTGACAAGATGTTC+TGG - chr8.3:2081879-2081898 MS.gene012456:CDS 35.0%
AAGGAACGAAATCTTCTTGA+AGG + chr8.3:2081753-2081772 None:intergenic 35.0%
AAGTTGAGTTTGTGGAACAT+AGG + chr8.3:2081497-2081516 None:intergenic 35.0%
AATAGTAGTTCCATCCTCTA+CGG + chr8.3:2078058-2078077 None:intergenic 35.0%
AATATAATCCACGTCTTGCA+AGG - chr8.3:2076859-2076878 MS.gene012456:CDS 35.0%
AATATTGATGAGAAATGGCC+AGG + chr8.3:2078265-2078284 None:intergenic 35.0%
ACACTCAATGCTGATATAGA+TGG - chr8.3:2080484-2080503 MS.gene012456:intron 35.0%
AGATTAATCACGGAGAATAG+TGG + chr8.3:2077335-2077354 None:intergenic 35.0%
AGGAACGAAATCTTCTTGAA+GGG + chr8.3:2081752-2081771 None:intergenic 35.0%
ATAACAACATACGCAAGAAG+AGG + chr8.3:2080339-2080358 None:intergenic 35.0%
ATATTGATGAGAAATGGCCA+GGG + chr8.3:2078264-2078283 None:intergenic 35.0%
ATCAATCTCAGGAATTATCG+TGG - chr8.3:2077068-2077087 MS.gene012456:CDS 35.0%
ATCTCTCCAAACCAAAGTAT+TGG + chr8.3:2079995-2080014 None:intergenic 35.0%
ATTAAGTAATTGGTCAGGCT+TGG - chr8.3:2080692-2080711 MS.gene012456:CDS 35.0%
ATTCAACTGCAACTCATGTT+TGG - chr8.3:2078389-2078408 MS.gene012456:intron 35.0%
CACCATGTTTCTTTCGTTTA+CGG - chr8.3:2077425-2077444 MS.gene012456:intron 35.0%
CACTACCAAAAGTAATGCAA+AGG - chr8.3:2081607-2081626 MS.gene012456:intron 35.0%
CCAAACATGCATTGAATTGA+TGG + chr8.3:2081170-2081189 None:intergenic 35.0%
CCATCAATTCAATGCATGTT+TGG - chr8.3:2081167-2081186 MS.gene012456:intron 35.0%
GAGCAGAGTCAATAAATTCA+TGG + chr8.3:2079772-2079791 None:intergenic 35.0%
GATTTAGAAGTAGGTGAAAG+AGG + chr8.3:2078719-2078738 None:intergenic 35.0%
GGTATGACAAAATTGTGCAT+AGG + chr8.3:2081268-2081287 None:intergenic 35.0%
GTGCTAATAGAAGAAACTTG+AGG - chr8.3:2081856-2081875 MS.gene012456:CDS 35.0%
GTTCACACACCAAAAACAAA+TGG - chr8.3:2080790-2080809 MS.gene012456:CDS 35.0%
GTTTGTGGAACATAGGTATA+AGG + chr8.3:2081490-2081509 None:intergenic 35.0%
TAACAACATACGCAAGAAGA+GGG + chr8.3:2080338-2080357 None:intergenic 35.0%
TCAACAAAATCACGTTGTCA+TGG + chr8.3:2081218-2081237 None:intergenic 35.0%
TCAACTTCAACAAGAACACA+TGG - chr8.3:2081510-2081529 MS.gene012456:intron 35.0%
TCAATTCCTAACAGAGAATG+TGG - chr8.3:2080358-2080377 MS.gene012456:intron 35.0%
TCTAATGTCATAGGTCTATG+AGG + chr8.3:2081331-2081350 None:intergenic 35.0%
TCTTGAAGGGGAAGAAAATT+TGG + chr8.3:2081739-2081758 None:intergenic 35.0%
TCTTGTTGAAGTTGAGTTTG+TGG + chr8.3:2081505-2081524 None:intergenic 35.0%
TGAACACGTGCAAAATGTTA+AGG + chr8.3:2081649-2081668 None:intergenic 35.0%
TGAAGAGAATTGACAACTCA+AGG + chr8.3:2081772-2081791 None:intergenic 35.0%
TTCAATCAATCCGTTTCTAC+AGG - chr8.3:2081963-2081982 MS.gene012456:CDS 35.0%
! AGGTGTCACCTTAACAATAT+TGG + chr8.3:2081311-2081330 None:intergenic 35.0%
! ATTTAAAGCAGCCAAATGGA+GGG + chr8.3:2077707-2077726 None:intergenic 35.0%
! CTCAACTCTAGTCTTTGTTT+AGG - chr8.3:2081798-2081817 MS.gene012456:intron 35.0%
! GAAAAATGAAGAAGCACACA+TGG + chr8.3:2078194-2078213 None:intergenic 35.0%
! GTTGTCCTTTGCATTACTTT+TGG + chr8.3:2081615-2081634 None:intergenic 35.0%
! GTTTTGCCAATACTTTGGTT+TGG - chr8.3:2079986-2080005 MS.gene012456:intron 35.0%
! TGAGCATTGTCAAAATTGCT+AGG - chr8.3:2079569-2079588 MS.gene012456:intron 35.0%
!! AGATACTTGCTTTGGAAAGT+CGG - chr8.3:2078131-2078150 MS.gene012456:intron 35.0%
!! CTTTGCATTACTTTTGGTAG+TGG + chr8.3:2081609-2081628 None:intergenic 35.0%
!!! GTATTTTGGGTTCTAATGTG+TGG + chr8.3:2081123-2081142 None:intergenic 35.0%
AAAAACTGAGCAATGTCTGG+TGG + chr8.3:2080947-2080966 None:intergenic 40.0%
AAATGTATGGTCGCTGTAGA+AGG - chr8.3:2080442-2080461 MS.gene012456:intron 40.0%
AATCAGTTAAATCCACCTGC+TGG + chr8.3:2079816-2079835 None:intergenic 40.0%
ACGTGTTCAAGTGAAGTTCT+TGG - chr8.3:2081660-2081679 MS.gene012456:CDS 40.0%
ACTGCAACTCATGTTTGGAT+TGG - chr8.3:2078394-2078413 MS.gene012456:intron 40.0%
AGCTGATGTTACTCCTTCAT+TGG - chr8.3:2081821-2081840 MS.gene012456:CDS 40.0%
ATGTTTACTAAGCACAGCCT+TGG - chr8.3:2078673-2078692 MS.gene012456:intron 40.0%
ATTGCAATGTCAAGGAAGCT+TGG - chr8.3:2080564-2080583 MS.gene012456:intron 40.0%
CAAGTTCTCAAACTGAGAGA+AGG - chr8.3:2081919-2081938 MS.gene012456:CDS 40.0%
CACAACAGATTGACGTAGTT+TGG - chr8.3:2077215-2077234 MS.gene012456:CDS 40.0%
CATACGAAGTGGTGTTTATG+AGG - chr8.3:2077918-2077937 MS.gene012456:intron 40.0%
CTCCGTAAACGAAAGAAACA+TGG + chr8.3:2077430-2077449 None:intergenic 40.0%
CTGAGAGAAGGAAATCATCT+TGG - chr8.3:2081931-2081950 MS.gene012456:CDS 40.0%
CTTCTATTAGCACTTGTGCA+AGG + chr8.3:2081849-2081868 None:intergenic 40.0%
CTTTCCAAACAAACTGCACA+TGG + chr8.3:2080421-2080440 None:intergenic 40.0%
GCACATGGATCTAAGCATAT+AGG + chr8.3:2080406-2080425 None:intergenic 40.0%
GGAAACAATCGAGAGATAGT+AGG + chr8.3:2078167-2078186 None:intergenic 40.0%
GGAACGAAATCTTCTTGAAG+GGG + chr8.3:2081751-2081770 None:intergenic 40.0%
GGAAGAGATATATATGGCGA+AGG + chr8.3:2079544-2079563 None:intergenic 40.0%
GTGATGTCAGATACTTGCTT+TGG - chr8.3:2078123-2078142 MS.gene012456:intron 40.0%
GTGCAACAATTGCAATGTCA+AGG - chr8.3:2080556-2080575 MS.gene012456:intron 40.0%
GTGTATCTATTGCTTGAGTC+TGG - chr8.3:2077038-2077057 MS.gene012456:CDS 40.0%
GTTTCTTTCGTTTACGGAGA+GGG - chr8.3:2077431-2077450 MS.gene012456:intron 40.0%
TATCCTCATATAGCATGAGC+TGG - chr8.3:2078566-2078585 MS.gene012456:intron 40.0%
TGACTGCTGAGAATGCAAAT+GGG - chr8.3:2079115-2079134 MS.gene012456:intron 40.0%
TGAGTTTGAACAAATCACGC+TGG - chr8.3:2078420-2078439 MS.gene012456:intron 40.0%
TGCAAACCAATAACTTCACG+TGG - chr8.3:2081711-2081730 MS.gene012456:intron 40.0%
TGCAAGTATATACCTCATGG+TGG + chr8.3:2076938-2076957 None:intergenic 40.0%
TGCTTGGTATATAGTCTGCA+AGG + chr8.3:2077756-2077775 None:intergenic 40.0%
TGGAAGAGAAAAGGATCACA+TGG + chr8.3:2080999-2081018 None:intergenic 40.0%
TGTTTCTTTCGTTTACGGAG+AGG - chr8.3:2077430-2077449 MS.gene012456:intron 40.0%
TTGAATGGTTGCATACGAAG+TGG - chr8.3:2077907-2077926 MS.gene012456:intron 40.0%
TTGGATCCACGTGAAGTTAT+TGG + chr8.3:2081720-2081739 None:intergenic 40.0%
TTTGACACCAAACACGTTCA+TGG + chr8.3:2080975-2080994 None:intergenic 40.0%
! AAGAGATGGTGATGTTCAAG+AGG - chr8.3:2076821-2076840 MS.gene012456:CDS 40.0%
! ACCAAGCATCCCTAACTTTT+GGG - chr8.3:2077768-2077787 MS.gene012456:intron 40.0%
! AGAACTTGTACATTTTCGGC+TGG + chr8.3:2079520-2079539 None:intergenic 40.0%
! AGATCCATGTGCAGTTTGTT+TGG - chr8.3:2080414-2080433 MS.gene012456:intron 40.0%
! AGTCTGGTTGGGAATTCTTT+TGG - chr8.3:2076762-2076781 MS.gene012456:CDS 40.0%
! ATATTGGTTGACAGCAGCTT+TGG - chr8.3:2079669-2079688 MS.gene012456:intron 40.0%
! CATGTGCAGTTTGTTTGGAA+AGG - chr8.3:2080419-2080438 MS.gene012456:intron 40.0%
! CATTTAAAGCAGCCAAATGG+AGG + chr8.3:2077708-2077727 None:intergenic 40.0%
! CTCCATTTGGCTGCTTTAAA+TGG - chr8.3:2077706-2077725 MS.gene012456:intron 40.0%
! CTTCAGCTATTGATTGCCAA+GGG - chr8.3:2079084-2079103 MS.gene012456:intron 40.0%
! CTTTTGGATGTTCTGCATCT+GGG - chr8.3:2076778-2076797 MS.gene012456:CDS 40.0%
! TACCAAGCATCCCTAACTTT+TGG - chr8.3:2077767-2077786 MS.gene012456:intron 40.0%
! TCTTCAGCTATTGATTGCCA+AGG - chr8.3:2079083-2079102 MS.gene012456:intron 40.0%
! TCTTTTGGATGTTCTGCATC+TGG - chr8.3:2076777-2076796 MS.gene012456:CDS 40.0%
! TGAAGAAGCACACATGGATA+TGG + chr8.3:2078188-2078207 None:intergenic 40.0%
! TTTTGGATGTTCTGCATCTG+GGG - chr8.3:2076779-2076798 MS.gene012456:CDS 40.0%
!! AAATGGTGTTGTCATGTCTG+TGG + chr8.3:2081691-2081710 None:intergenic 40.0%
!! CTGGTGTTGATATCAATCTC+AGG - chr8.3:2077057-2077076 MS.gene012456:CDS 40.0%
!! CTTGCAAGGTATTCGACTTT+TGG - chr8.3:2076873-2076892 MS.gene012456:CDS 40.0%
!! TGGTTTGTTTGAATTCCGCT+AGG + chr8.3:2077315-2077334 None:intergenic 40.0%
!! TTGACAAGATGTTCTGGTTC+TGG - chr8.3:2081885-2081904 MS.gene012456:CDS 40.0%
!!! AGATGTTCTGGTTCTGGTTT+TGG - chr8.3:2081891-2081910 MS.gene012456:CDS 40.0%
AAAAACCCACTCAGACACCA+AGG + chr8.3:2078693-2078712 None:intergenic 45.0%
AAGCTTGCCAACATGGTCAT+TGG - chr8.3:2077506-2077525 MS.gene012456:intron 45.0%
ACTATACTGTGGCGACATAG+AGG + chr8.3:2081558-2081577 None:intergenic 45.0%
AGAGGACAAGCTATTGAACC+TGG + chr8.3:2081540-2081559 None:intergenic 45.0%
AGCTTGCCAACATGGTCATT+GGG - chr8.3:2077507-2077526 MS.gene012456:intron 45.0%
AGGACAAGCTATTGAACCTG+GGG + chr8.3:2081538-2081557 None:intergenic 45.0%
CAATCCGTTTCTACAGGAAG+TGG - chr8.3:2081969-2081988 MS.gene012456:CDS 45.0%
CATGAACGAGCAACCATCAA+GGG + chr8.3:2079460-2079479 None:intergenic 45.0%
CTAGTTTCTGCAGCAAGAGA+TGG - chr8.3:2076807-2076826 MS.gene012456:CDS 45.0%
CTCGTTCATGGCATAGAAGT+TGG - chr8.3:2079470-2079489 MS.gene012456:intron 45.0%
CTGACTGCTGAGAATGCAAA+TGG - chr8.3:2079114-2079133 MS.gene012456:intron 45.0%
CTTCCAGCTCATGCTATATG+AGG + chr8.3:2078572-2078591 None:intergenic 45.0%
CTTGTGCAAGGAACCAATGA+AGG + chr8.3:2081837-2081856 None:intergenic 45.0%
GAGGACAAGCTATTGAACCT+GGG + chr8.3:2081539-2081558 None:intergenic 45.0%
GCAACTGCACACTTTCAACA+TGG + chr8.3:2078002-2078021 None:intergenic 45.0%
GCATCCACTTCCTGTAGAAA+CGG + chr8.3:2081976-2081995 None:intergenic 45.0%
TCCCAAAAGTTAGGGATGCT+TGG + chr8.3:2077772-2077791 None:intergenic 45.0%
TCTCAGGAATTATCGTGGTC+AGG - chr8.3:2077073-2077092 MS.gene012456:CDS 45.0%
TGAGCTGCAGAGTAATGCAA+AGG + chr8.3:2076912-2076931 None:intergenic 45.0%
TTCCACCACATGCTGCATAA+TGG + chr8.3:2078927-2078946 None:intergenic 45.0%
TTCCTAACAGAGAATGTGGC+TGG - chr8.3:2080362-2080381 MS.gene012456:intron 45.0%
TTGAACAAATCACGCTGGCA+CGG - chr8.3:2078425-2078444 MS.gene012456:intron 45.0%
TTGATGCAAGCTTGCCAACA+TGG - chr8.3:2077499-2077518 MS.gene012456:intron 45.0%
TTGCATTACTCTGCAGCTCA+TGG - chr8.3:2076912-2076931 MS.gene012456:CDS 45.0%
TTTAGATTGGGGGGTGAGAT+TGG + chr8.3:2078513-2078532 None:intergenic 45.0%
! ACAGCAGCTTTGGTCTTCAT+GGG - chr8.3:2079679-2079698 MS.gene012456:intron 45.0%
! ACTTGTACATTTTCGGCTGG+AGG + chr8.3:2079517-2079536 None:intergenic 45.0%
! AGTTTGTTTGCCTTTGCGCT+CGG + chr8.3:2080019-2080038 None:intergenic 45.0%
! CAATGTCTGGTGGTGAGAAA+GGG + chr8.3:2080937-2080956 None:intergenic 45.0%
! CTGCATATGGCAGCATTGAA+TGG - chr8.3:2077976-2077995 MS.gene012456:intron 45.0%
! CTGCTTTAAATGGCCACACT+CGG - chr8.3:2077716-2077735 MS.gene012456:intron 45.0%
! GGCCATTTAAAGCAGCCAAA+TGG + chr8.3:2077711-2077730 None:intergenic 45.0%
! TGAAAGTGTGCAGTTGCTCT+TGG - chr8.3:2078005-2078024 MS.gene012456:intron 45.0%
! TTCGGCTGGAGGTTCTTTTA+AGG + chr8.3:2079506-2079525 None:intergenic 45.0%
! TTGAAGATGGACTCCCTTGA+TGG - chr8.3:2079444-2079463 MS.gene012456:intron 45.0%
!! ATGGCATAGAAGTTGGCTTG+AGG - chr8.3:2079477-2079496 MS.gene012456:intron 45.0%
!! TTTGGTAGTGGTCTTGTGTC+TGG + chr8.3:2081597-2081616 None:intergenic 45.0%
AATGGCCAGGGTGTGTATGT+AGG + chr8.3:2078252-2078271 None:intergenic 50.0%
CCAAACCTACATACACACCC+TGG - chr8.3:2078244-2078263 MS.gene012456:intron 50.0%
CCACTCCATTATGCAGCATG+TGG - chr8.3:2078919-2078938 MS.gene012456:intron 50.0%
CCAGGGTGTGTATGTAGGTT+TGG + chr8.3:2078247-2078266 None:intergenic 50.0%
CCATGAACGAGCAACCATCA+AGG + chr8.3:2079461-2079480 None:intergenic 50.0%
CTAACAGAGAATGTGGCTGG+AGG - chr8.3:2080365-2080384 MS.gene012456:intron 50.0%
CTCCAGCCACATTCTCTGTT+AGG + chr8.3:2080367-2080386 None:intergenic 50.0%
CTCCATTATGCAGCATGTGG+TGG - chr8.3:2078922-2078941 MS.gene012456:intron 50.0%
GAGATTGGCAGAATCACGGA+GGG + chr8.3:2078498-2078517 None:intergenic 50.0%
GGACAAGCTATTGAACCTGG+GGG + chr8.3:2081537-2081556 None:intergenic 50.0%
GGGTGAGATTGGCAGAATCA+CGG + chr8.3:2078502-2078521 None:intergenic 50.0%
GTCGAATACCTTGCAAGACG+TGG + chr8.3:2076870-2076889 None:intergenic 50.0%
GTGCAGTTGCTCTTGGACTT+GGG - chr8.3:2078012-2078031 MS.gene012456:intron 50.0%
GTTTGTTTGCCTTTGCGCTC+GGG + chr8.3:2080018-2080037 None:intergenic 50.0%
TCCATCCTCTACGGTAACCT+CGG + chr8.3:2078049-2078068 None:intergenic 50.0%
TGAGATTGGCAGAATCACGG+AGG + chr8.3:2078499-2078518 None:intergenic 50.0%
TGTGCAGTTGCTCTTGGACT+TGG - chr8.3:2078011-2078030 MS.gene012456:intron 50.0%
TTGCCAACATGGTCATTGGG+AGG - chr8.3:2077510-2077529 MS.gene012456:intron 50.0%
! CCACATGCTGCATAATGGAG+TGG + chr8.3:2078922-2078941 None:intergenic 50.0%
! CCTTGATGGTTGCTCGTTCA+TGG - chr8.3:2079458-2079477 MS.gene012456:intron 50.0%
! GACAGCAGCTTTGGTCTTCA+TGG - chr8.3:2079678-2079697 MS.gene012456:intron 50.0%
! GCAATGTCTGGTGGTGAGAA+AGG + chr8.3:2080938-2080957 None:intergenic 50.0%
! TGGTGATGTTCAAGAGGCGA+AGG - chr8.3:2076827-2076846 MS.gene012456:CDS 50.0%
ACAAGAACACATGGTCCCCC+AGG - chr8.3:2081519-2081538 MS.gene012456:intron 55.0%
AGCAGTCAGACTAGCACCCT+TGG + chr8.3:2079103-2079122 None:intergenic 55.0%
AGGCATCACTGCGCTGCATA+TGG - chr8.3:2077963-2077982 MS.gene012456:intron 55.0%
CAAGTCAACTAGCAGCCAGC+AGG - chr8.3:2079798-2079817 MS.gene012456:CDS 55.0%
CCAACATGGTCATTGGGAGG+TGG - chr8.3:2077513-2077532 MS.gene012456:intron 55.0%
CCACCTCCCAATGACCATGT+TGG + chr8.3:2077516-2077535 None:intergenic 55.0%
TCCGAGGTTACCGTAGAGGA+TGG - chr8.3:2078045-2078064 MS.gene012456:intron 55.0%
TGTGTCCGAGGTTACCGTAG+AGG - chr8.3:2078041-2078060 MS.gene012456:intron 55.0%
TTAGCCGAATGCACCGAGTG+TGG + chr8.3:2077732-2077751 None:intergenic 55.0%
!! ATGGCCACACTCGGTGCATT+CGG - chr8.3:2077725-2077744 MS.gene012456:intron 55.0%
!! CACAGCCTTGGTGTCTGAGT+GGG - chr8.3:2078685-2078704 MS.gene012456:intron 55.0%
!! TGGAGGTACTGCCCTCCATT+TGG - chr8.3:2077693-2077712 MS.gene012456:intron 55.0%
ATTCCGCTAGGCTACAGCGC+CGG + chr8.3:2077303-2077322 None:intergenic 60.0%
CTTGGGAGCTTCTGTGTCCG+AGG - chr8.3:2078029-2078048 MS.gene012456:intron 60.0%
GGAGGGCAGTACCTCCATTC+AGG + chr8.3:2077690-2077709 None:intergenic 60.0%
GTCAACTAGCAGCCAGCAGG+TGG - chr8.3:2079801-2079820 MS.gene012456:CDS 60.0%
TGCAGCTCATGGCCACCATG+AGG - chr8.3:2076923-2076942 MS.gene012456:CDS 60.0%
TGGAGAGATCCCGAGCGCAA+AGG - chr8.3:2080006-2080025 MS.gene012456:intron 60.0%
!! GCACAGCCTTGGTGTCTGAG+TGG - chr8.3:2078684-2078703 MS.gene012456:intron 60.0%
ACTCCGGCGCTGTAGCCTAG+CGG - chr8.3:2077297-2077316 MS.gene012456:intron 65.0%
! CTAGGCTACAGCGCCGGAGT+AGG + chr8.3:2077297-2077316 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 2076750 2081998 2076750 ID=MS.gene012456
chr8.3 mRNA 2076750 2081998 2076750 ID=MS.gene012456.t1;Parent=MS.gene012456
chr8.3 exon 2081804 2081998 2081804 ID=MS.gene012456.t1.exon1;Parent=MS.gene012456.t1
chr8.3 CDS 2081804 2081998 2081804 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2081654 2081713 2081654 ID=MS.gene012456.t1.exon2;Parent=MS.gene012456.t1
chr8.3 CDS 2081654 2081713 2081654 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2081184 2081255 2081184 ID=MS.gene012456.t1.exon3;Parent=MS.gene012456.t1
chr8.3 CDS 2081184 2081255 2081184 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2080909 2081078 2080909 ID=MS.gene012456.t1.exon4;Parent=MS.gene012456.t1
chr8.3 CDS 2080909 2081078 2080909 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2080661 2080821 2080661 ID=MS.gene012456.t1.exon5;Parent=MS.gene012456.t1
chr8.3 CDS 2080661 2080821 2080661 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2079785 2079843 2079785 ID=MS.gene012456.t1.exon6;Parent=MS.gene012456.t1
chr8.3 CDS 2079785 2079843 2079785 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2079612 2079658 2079612 ID=MS.gene012456.t1.exon7;Parent=MS.gene012456.t1
chr8.3 CDS 2079612 2079658 2079612 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2079158 2079298 2079158 ID=MS.gene012456.t1.exon8;Parent=MS.gene012456.t1
chr8.3 CDS 2079158 2079298 2079158 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2078285 2078376 2078285 ID=MS.gene012456.t1.exon9;Parent=MS.gene012456.t1
chr8.3 CDS 2078285 2078376 2078285 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
chr8.3 exon 2076750 2077291 2076750 ID=MS.gene012456.t1.exon10;Parent=MS.gene012456.t1
chr8.3 CDS 2076750 2077291 2076750 ID=cds.MS.gene012456.t1;Parent=MS.gene012456.t1
Gene Sequence

>MS.gene012456

ATGAAATTTCTAAGTCTGGTTGGGAATTCTTTTGGATGTTCTGCATCTGGGGAGAGACTAGTTTCTGCAGCAAGAGATGGTGATGTTCAAGAGGCGAAGGCCTTGTTAGAATATAATCCACGTCTTGCAAGGTATTCGACTTTTGGAGTTCGTAATTCTCCTTTGCATTACTCTGCAGCTCATGGCCACCATGAGGTATATACTTGCAATTCAATGCACCTCATTTTCTTGCATCGTGTTTTTCGCAATTAGTCTTTAACATATCTATTGTGTTTTGCATTGTAGATAGTGTATCTATTGCTTGAGTCTGGTGTTGATATCAATCTCAGGAATTATCGTGGTCAGGTAATCCAATATTATTTTGTTTCAATGTTCTTTTCCTTAATTTAGTAGACCATATCTATTGTCGCATAAATGCGAAGCTATAGCTCAATCTAGCATAGTGATGTCAAATAGAAGCTATAGCACAACAGATTGACGTAGTTTGGACAAACTGCTATTGTTCTGCGATACACAATTTAGTACAAATTGTTTTCAAATTATGCCTACTCCGGCGCTGTAGCCTAGCGGAATTCAAACAAACCACTATTCTCCGTGATTAATCTTCTGCTGATTTTCTAAAACTGTAAATTTTAATGTTATGCTTCAAACTTTTGTTGTTTTGGGTATGGATAGCACCATGTTTCTTTCGTTTACGGAGAGGGAAACTTCTTTACTTACTTTACAATTTATATCATTAACAGACTGCATTGATGCAAGCTTGCCAACATGGTCATTGGGAGGTGGTTCAGACCTTGATTATTTTTAAAGCCAATGTAAGATCATTTCTGCAAACCGATTTTGTGCTATTATATTAACAATGTGATAATTTATTGATAGAATGAGTTGTATAAAATATTGCTTGTTAAATTGGACTGCAGATACATAAAACAGATTACCTGAATGGAGGTACTGCCCTCCATTTGGCTGCTTTAAATGGCCACACTCGGTGCATTCGGCTAATCCTTGCAGACTATATACCAAGCATCCCTAACTTTTGGGATATATTACAGACAGGTGATCAGACATCAATCTCAGAATTTGATCAAAGGTACTCTCACTCAGAAGTTCTATTGTAGTCATCCATTATAAACTGTTGCAGTAAGTTAATTCTGTCTTTGAATGGTTGCATACGAAGTGGTGTTTATGAGGTAATTAACAAAACTTCTGATGGAGGCATCACTGCGCTGCATATGGCAGCATTGAATGGCCATGTTGAAAGTGTGCAGTTGCTCTTGGACTTGGGAGCTTCTGTGTCCGAGGTTACCGTAGAGGATGGAACTACTATTGATTTAATTGGTAATTATATATCATCTCCTAGTTCATGTGATTAAGTGATGTCAGATACTTGCTTTGGAAAGTCGGCATTTATATTCCTACTATCTCTCGATTGTTTCCATATCCATGTGTGCTTCTTCATTTTTCTTTTCGAAACTTGCATAATTGGTATTGTGACCAAACCTACATACACACCCTGGCCATTTCTCATCAATATTGTTCAACATTTGGTTTGTAGAGAAATTTTAAGAAGTGCTTAGTTGAACTTGATAACTAACTTACTTTACAATGGCTTGGCACAATAAAATTTGTAGTGGTAGAAATTCAACTGCAACTCATGTTTGGATTGGCATTGAGTTTGAACAAATCACGCTGGCACGGTGATTTTATCGAAGCTTCAAAGTGTACGTTTGTTAAAATCATGGTGGCCCTCCGTGATTCTGCCAATCTCACCCCCCAATCTAAACATTTACTATATTCTATAACAAAACTGTTTATTTATCCTCATATAGCATGAGCTGGAAGAACAATGAACTAATACTAAAAACCTTTCCATCATATTCCATTATCTACATTCTACACATTGCACTGTTTTCCTCTTGTCTAATGTTTACTAAGCACAGCCTTGGTGTCTGAGTGGGTTTTTCTCCCTCTTTCACCTACTTCTAAATCTTAGCAGTATAGCTCTCAGTAAACATTTATAGAATTCAATTAGGAGAGAGATTAGAACTAATTTTTTTTCCCCTGTACTACATAAGAGAAAATGCTTCATGTTTAAAGCGGACCCCTAAGTTAACTAGTTTGATCTCCACTAACTGCTATCTATTTTTATTTACAGGTTCTGGGAGCACTCCACTCCATTATGCAGCATGTGGTGGAAATGCACAATGTTGTCAAGTGTGTTTCTATTTTCCTTTAGAAGACTGTTTCATTTTAGGATAAAAATATAATTTTGAAACTGAAAATATATTGCTGCTCTTCATATTGAATTTACATTTATTTTTTATTGTGTATTATCTTCAGCTATTGATTGCCAAGGGTGCTAGTCTGACTGCTGAGAATGCAAATGGGTATGTCTAAATACATAGTATTTGTTAAGTTTGATGTGTGATAAACTTACCTTATTTACAGCTTGGCATGTTAAACATATAAATATTATGATCTATTTAGATCATAGGAAATTTAATAACCTTTACCCCTTGTTTTTAACTTACTACGAGATTCACTATCTATCGTATTGGAACTATGTACAATTTTATAAGTTTATGTATAGAACTTTGTTGTACTTGCATGAAGCAAACATAGATTTGTATTGTCTCAAGCACTATGTATCTTAAATGGATTTCAAATTGTTTTGTTTACTCTATTGATTTTGTTTTGAAGATGGACTCCCTTGATGGTTGCTCGTTCATGGCATAGAAGTTGGCTTGAGGACACCTTAAAAGAACCTCCAGCCGAAAATGTACAAGTTCTTCCTTCGCCATATATATCTCTTCCACTTATGAGCATTGTCAAAATTGCTAGGTATGTGTCTTTCAGAGCCATCCTTTCAAAATTCAACCAATTTCTTCCTAACATTTAATTAATAACCTTTCAAGATTGATATTGGTTGACAGCAGCTTTGGTCTTCATGGGAAAAACCATGTGAAAAATTGTTTTAATAGAAATTAGCATCATTTGATTTTAATAAGGACATTTCTTTCCATGAATTTATTGACTCTGCTCTGATTTCAAGTCAACTAGCAGCCAGCAGGTGGATTTAACTGATTATACTTTGAATGCGGTGACAAACATGATTATCAAAGAGTTCCGAATAAAATTCTACGATACTAGGAAAAATTTACTCAAATTTATATTTATTTGGTTGTTGTTCATGTGATTATGTGCATATTTGGTTGAGTTAGAGATCTTCAATATAGGTTTTGCCAATACTTTGGTTTGGAGAGATCCCGAGCGCAAAGGCAAACAAACTATTTGTTGCTAACTAGATGAGTTTAGTCATTTAAGGTTCATTAATTACATATCTAATTTCAGTGTCATCAGCTTCATTGAAAAGTGCTTTGATCTTTTCATTTCATTTATAGCTTAACCAAATAATGCTATATTTGTTCAAATCAACCTATTAGATTATGAAGTTTTTAAGTAAATGAAAGCGAACACACTTCTAATATTTTAATGCACTTATGTTGACAGTAATGAGTGAACTTAGTACATAATTTACTCTGCTTCAAATTTTATGTATTCCAAAGGTTACTATTATTGATCTTTCCCTCTTCTTGCGTATGTTGTTATCAATTCCTAACAGAGAATGTGGCTGGAGGACAAGTGAATTAACACCTATATGCTTAGATCCATGTGCAGTTTGTTTGGAAAGGAAATGTATGGTCGCTGTAGAAGGTATAACACCCTTTTAATTTACACTCAATGCTGATATAGATGGTTTTACATGGAAAAATGATCTGGACTTTTAAGATGCTTAAACTTTATATGTGCAACAATTGCAATGTCAAGGAAGCTTGGTCTCATTACCAGAAAATACATTCAAAGTAGATATTCTCAAAAATCTAAATGTTCTATTTACAATATCTAGTCATTTCATTTTGACTGATATATTTATTTACATATATTAAGTAATTGGTCAGGCTTGGATATGTTTTCTACAAATGGTATGATTCTGTCAAATAATAAGAGCAAATAATTAGAAAGTAATGGTGACAGCACATGTTCACACACCAAAAACAAATGGAAAAAACATAACTATGCTTCTTTGTTGGTAATGACAACCTTTGAATCAATGGTAAAGGAATAGAGCCATAGAGAAACGTATTTTGCAAGTGTTTCTATATGGAGTTATTGCACGGTCATATCCCTTTCTCACCACCAGACATTGCTCAGTTTTTATTTTCCATGAACGTGTTTGGTGTCAAATCCATGTGATCCTTTTCTCTTCCATTTTATATTTTGATGTCTTTTCTCTTCAACCTCTACTGGTTTATAATTTTACACCCATATTTTGTCATCTACCTCTTTGTATTTTTATTGGCAAAATTATGCCACACATTAGAACCCAAAATACTCTAGTAGAAATTGAAGATAAAAACCATCAATTCAATGCATGTTTGGATTGACGCTGAGTTTGATGAATTCACCATGACAACGTGATTTTGTTGAAACTAAGTGCAGCTTAGCTACAATTGTCCTATGCACAATTTTGTCATACCTTGTCAATTCAAACACTAAACCAATATTGTTAAGGTGACACCTCATAGACCTATGACATTAGAAATTATTGTTATTGGCTTAAAAAGTGTTGGTTCATAGATTTCAGTAATTGACACAAATTACTGCTATTTATGTGAGACTAATGCATATGATAAATTGATAATGCAGGTTGTGATCATGAATTCTGTACACAGTGTGCCTTATACCTATGTTCCACAAACTCAACTTCAACAAGAACACATGGTCCCCCAGGTTCAATAGCTTGTCCTCTATGTCGCCACAGTATAGTCTCATTTGTTAAGCTTCCAGACACAAGACCACTACCAAAAGTAATGCAAAGGACAACAACAAACTTGTCCTTAACATTTTGCACGTGTTCAAGTGAAGTTCTTGGTGATTCCACAGACATGACAACACCATTTTGCAAACCAATAACTTCACGTGGATCCAAATTTTCTTCCCCTTCAAGAAGATTTCGTTCCTTGAGTTGTCAATTCTCTTCATTCAGACTCAACTCTAGTCTTTGTTTAGGAGCTGATGTTACTCCTTCATTGGTTCCTTGCACAAGTGCTAATAGAAGAAACTTGAGGAACCATTTGACAAGATGTTCTGGTTCTGGTTTTGGAAGATCAAGTTCTCAAACTGAGAGAAGGAAATCATCTTGGTTTTGTTCTTTCAATCAATCCGTTTCTACAGGAAGTGGATGCTAA
Protein sequence

>MS.gene012456.t1

MKFLSLVGNSFGCSASGERLVSAARDGDVQEAKALLEYNPRLARYSTFGVRNSPLHYSAAHGHHEIVYLLLESGVDINLRNYRGQTALMQACQHGHWEVVQTLIIFKANIHKTDYLNGGTALHLAALNGHTRCIRLILADYIPSIPNFWDILQTGDQTSISEFDQSGVYEVINKTSDGGITALHMAALNGHVESVQLLLDLGASVSEVTVEDGTTIDLIGSGSTPLHYAACGGNAQCCQLLIAKGASLTAENANGWTPLMVARSWHRSWLEDTLKEPPAENVQVLPSPYISLPLMSIVKIARECGWRTSELTPICLDPCAVCLERKCMVAVEGCDHEFCTQCALYLCSTNSTSTRTHGPPGSIACPLCRHSIVSFVKLPDTRPLPKVMQRTTTNLSLTFCTCSSEVLGDSTDMTTPFCKPITSRGSKFSSPSRRFRSLSCQFSSFRLNSSLCLGADVTPSLVPCTSANRRNLRNHLTRCSGSGFGRSSSQTERRKSSWFCSFNQSVSTGSGC