Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035652.t1 | XP_003610237.2 | 96.7 | 512 | 14 | 1 | 1 | 512 | 1 | 509 | 1.30E-265 | 925.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035652.t1 | Q6KAE5 | 62.0 | 521 | 162 | 9 | 1 | 510 | 1 | 496 | 3.8e-157 | 556.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035652.t1 | G7JEC0 | 96.7 | 512 | 14 | 1 | 1 | 512 | 1 | 509 | 9.3e-266 | 925.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035652.t1 | MTR_4g129470 | 97.656 | 512 | 9 | 1 | 1 | 512 | 1 | 509 | 0.0 | 1030 |
MS.gene035652.t1 | MTR_4g129470 | 97.170 | 424 | 9 | 1 | 89 | 512 | 1 | 421 | 0.0 | 848 |
MS.gene035652.t1 | MTR_1g100797 | 59.057 | 403 | 150 | 4 | 7 | 401 | 1 | 396 | 6.84e-165 | 477 |
MS.gene035652.t1 | MTR_0020s0130 | 58.313 | 403 | 153 | 5 | 7 | 401 | 1 | 396 | 1.73e-161 | 468 |
MS.gene035652.t1 | MTR_1g100797 | 54.362 | 298 | 121 | 4 | 112 | 401 | 2 | 292 | 1.60e-103 | 316 |
MS.gene035652.t1 | MTR_2g096760 | 31.436 | 404 | 215 | 11 | 7 | 376 | 1 | 376 | 1.08e-41 | 155 |
MS.gene035652.t1 | MTR_4g063830 | 30.303 | 396 | 221 | 9 | 11 | 376 | 6 | 376 | 1.88e-36 | 140 |
MS.gene035652.t1 | MTR_4g021880 | 27.862 | 463 | 250 | 12 | 20 | 449 | 101 | 512 | 1.20e-32 | 131 |
MS.gene035652.t1 | MTR_4g021880 | 30.996 | 271 | 160 | 5 | 20 | 288 | 101 | 346 | 6.63e-23 | 101 |
MS.gene035652.t1 | MTR_6g027840 | 28.279 | 244 | 129 | 8 | 54 | 266 | 246 | 474 | 9.21e-16 | 80.5 |
MS.gene035652.t1 | MTR_1g089180 | 29.082 | 196 | 115 | 6 | 53 | 245 | 255 | 429 | 1.18e-14 | 76.6 |
MS.gene035652.t1 | MTR_7g031370 | 28.740 | 254 | 135 | 9 | 40 | 290 | 436 | 646 | 1.52e-13 | 73.9 |
MS.gene035652.t1 | MTR_7g031370 | 29.134 | 254 | 134 | 9 | 40 | 290 | 276 | 486 | 1.68e-13 | 73.6 |
MS.gene035652.t1 | MTR_4g092760 | 26.295 | 251 | 132 | 7 | 20 | 262 | 27 | 232 | 1.47e-12 | 70.5 |
MS.gene035652.t1 | MTR_5g043640 | 31.818 | 154 | 77 | 6 | 122 | 262 | 58 | 196 | 2.67e-12 | 67.4 |
MS.gene035652.t1 | MTR_7g100390 | 27.106 | 273 | 157 | 8 | 20 | 288 | 53 | 287 | 3.90e-12 | 68.9 |
MS.gene035652.t1 | MTR_5g077770 | 29.694 | 229 | 113 | 9 | 24 | 249 | 563 | 746 | 4.01e-12 | 69.3 |
MS.gene035652.t1 | MTR_5g019105 | 93.103 | 29 | 2 | 0 | 239 | 267 | 28 | 56 | 6.03e-12 | 61.2 |
MS.gene035652.t1 | MTR_1g115575 | 28.409 | 264 | 135 | 9 | 9 | 264 | 128 | 345 | 3.13e-11 | 66.2 |
MS.gene035652.t1 | MTR_4g116160 | 26.587 | 252 | 140 | 8 | 15 | 262 | 35 | 245 | 3.53e-11 | 65.9 |
MS.gene035652.t1 | MTR_4g116160 | 25.794 | 252 | 142 | 7 | 15 | 262 | 35 | 245 | 7.58e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035652.t1 | AT5G57740 | 65.703 | 519 | 153 | 12 | 1 | 509 | 1 | 504 | 0.0 | 632 |
MS.gene035652.t1 | AT5G07270 | 56.635 | 422 | 175 | 4 | 7 | 427 | 1 | 415 | 6.46e-164 | 474 |
MS.gene035652.t1 | AT2G28840 | 31.592 | 402 | 216 | 11 | 7 | 376 | 1 | 375 | 1.54e-36 | 141 |
MS.gene035652.t1 | AT2G28840 | 31.548 | 336 | 172 | 10 | 72 | 376 | 53 | 361 | 1.24e-26 | 112 |
MS.gene035652.t1 | AT5G14230 | 28.302 | 265 | 151 | 8 | 39 | 266 | 329 | 591 | 9.78e-16 | 80.9 |
MS.gene035652.t1 | AT5G14230 | 28.522 | 291 | 138 | 10 | 23 | 262 | 348 | 619 | 9.30e-13 | 71.2 |
MS.gene035652.t1 | AT5G14230 | 28.077 | 260 | 149 | 7 | 39 | 262 | 169 | 426 | 1.69e-15 | 79.7 |
MS.gene035652.t1 | AT5G14230 | 28.522 | 291 | 138 | 10 | 23 | 262 | 188 | 459 | 1.42e-12 | 70.5 |
MS.gene035652.t1 | AT2G31820 | 30.242 | 248 | 131 | 10 | 46 | 288 | 217 | 427 | 2.66e-14 | 76.3 |
MS.gene035652.t1 | AT3G12360 | 31.102 | 254 | 122 | 9 | 9 | 257 | 114 | 319 | 1.09e-13 | 73.9 |
MS.gene035652.t1 | AT3G12360 | 31.102 | 254 | 122 | 9 | 9 | 257 | 126 | 331 | 1.24e-13 | 73.9 |
MS.gene035652.t1 | AT3G04710 | 28.251 | 223 | 123 | 6 | 55 | 262 | 283 | 483 | 4.39e-13 | 72.4 |
MS.gene035652.t1 | AT5G02620 | 26.562 | 256 | 162 | 9 | 35 | 274 | 1 | 246 | 7.60e-13 | 71.2 |
MS.gene035652.t1 | AT5G02620 | 26.562 | 256 | 162 | 9 | 35 | 274 | 1 | 246 | 7.60e-13 | 71.2 |
MS.gene035652.t1 | AT5G02620 | 26.562 | 256 | 162 | 9 | 35 | 274 | 1 | 246 | 7.60e-13 | 71.2 |
MS.gene035652.t1 | AT3G04710 | 27.753 | 227 | 127 | 6 | 51 | 262 | 55 | 259 | 1.07e-12 | 70.5 |
MS.gene035652.t1 | AT5G02620 | 27.897 | 233 | 142 | 9 | 52 | 268 | 18 | 240 | 2.24e-12 | 69.7 |
MS.gene035652.t1 | AT5G02620 | 29.885 | 174 | 93 | 4 | 23 | 195 | 98 | 243 | 6.31e-12 | 68.6 |
MS.gene035652.t1 | AT5G02620 | 27.897 | 233 | 142 | 9 | 52 | 268 | 18 | 240 | 2.24e-12 | 69.7 |
MS.gene035652.t1 | AT5G02620 | 29.885 | 174 | 93 | 4 | 23 | 195 | 98 | 243 | 6.31e-12 | 68.6 |
MS.gene035652.t1 | AT1G07710 | 29.921 | 254 | 133 | 10 | 16 | 263 | 65 | 279 | 2.39e-12 | 69.7 |
MS.gene035652.t1 | AT1G07710 | 29.921 | 254 | 133 | 10 | 16 | 263 | 65 | 279 | 2.39e-12 | 69.7 |
MS.gene035652.t1 | AT2G03430 | 33.553 | 152 | 83 | 4 | 117 | 260 | 46 | 187 | 5.67e-12 | 66.2 |
MS.gene035652.t1 | AT1G05640 | 29.536 | 237 | 129 | 7 | 54 | 288 | 191 | 391 | 9.30e-12 | 68.2 |
MS.gene035652.t1 | AT1G05640 | 30.808 | 198 | 118 | 7 | 23 | 207 | 195 | 386 | 7.42e-11 | 65.1 |
MS.gene035652.t1 | AT3G04710 | 27.753 | 227 | 126 | 7 | 51 | 262 | 55 | 258 | 2.46e-11 | 66.2 |
MS.gene035652.t1 | AT2G14255 | 28.646 | 192 | 101 | 4 | 50 | 241 | 90 | 245 | 4.22e-11 | 65.9 |
MS.gene035652.t1 | AT5G20350 | 26.613 | 248 | 135 | 7 | 20 | 262 | 35 | 240 | 6.19e-11 | 65.5 |
MS.gene035652.t1 | AT5G60070 | 28.319 | 226 | 123 | 9 | 23 | 245 | 115 | 304 | 9.79e-11 | 64.7 |
Find 124 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGAAGGGGAAGAAAATT+TGG | 0.191675 | 8.1:+3482314 | None:intergenic |
CTCCATTTGGCTGCTTTAAA+TGG | 0.204812 | 8.1:-3486350 | MS.gene035652:CDS |
GGAACTACTATTGATTTAAT+TGG | 0.211124 | 8.1:-3485990 | MS.gene035652:intron |
AGTCTGGTTGGGAATTCTTT+TGG | 0.215532 | 8.1:-3487321 | MS.gene035652:CDS |
TTGGATCCACGTGAAGTTAT+TGG | 0.227928 | 8.1:+3482333 | None:intergenic |
AGATGTTCTGGTTCTGGTTT+TGG | 0.245396 | 8.1:-3482159 | MS.gene035652:CDS |
TACCAAGCGTCCCTAACTTT+TGG | 0.252337 | 8.1:-3486289 | MS.gene035652:CDS |
TTGACAAGATGTTCTGGTTC+TGG | 0.258460 | 8.1:-3482165 | MS.gene035652:CDS |
CTTGCAAGGTATTCGACTTT+TGG | 0.271778 | 8.1:-3487210 | MS.gene035652:CDS |
TGTAATATATCCCAAAAGTT+AGG | 0.292151 | 8.1:+3486278 | None:intergenic |
CCTTGATGGTTGCTCGTTCA+TGG | 0.299512 | 8.1:-3484598 | MS.gene035652:CDS |
GAAGTTATTGGTTTGCAAAA+TGG | 0.338692 | 8.1:+3482345 | None:intergenic |
CTCAACTCTAGTCTTTGTTT+AGG | 0.346862 | 8.1:-3482252 | MS.gene035652:CDS |
AACCATTTGACAAGATGTTC+TGG | 0.351599 | 8.1:-3482171 | MS.gene035652:CDS |
GTTTGTGGAACATAGGTATA+AGG | 0.361530 | 8.1:+3482563 | None:intergenic |
AGATCCATGTGCAGTTTGTT+TGG | 0.362914 | 8.1:-3483642 | MS.gene035652:CDS |
AGCTGATGTTACTCCTTCAT+TGG | 0.369879 | 8.1:-3482229 | MS.gene035652:CDS |
TTTGGTAGTGGTCTTGTGTC+TGG | 0.372671 | 8.1:+3482456 | None:intergenic |
GGAGGGCAGTACCTCCATTC+AGG | 0.376256 | 8.1:+3486369 | None:intergenic |
GTGTATCTCTTGCTTGAGTC+TGG | 0.396912 | 8.1:-3487045 | MS.gene035652:CDS |
TGGAGGTACTGCCCTCCATT+TGG | 0.397991 | 8.1:-3486363 | MS.gene035652:CDS |
GTTGTCCTTTGCATTACTTT+TGG | 0.399471 | 8.1:+3482438 | None:intergenic |
TCCCACCACATGCTGCATAA+TGG | 0.401799 | 8.1:+3485132 | None:intergenic |
TGTGCAGTTGCTCTTGGACT+TGG | 0.405253 | 8.1:-3486045 | MS.gene035652:CDS |
TGAAATTTCTAAGTCTGGTT+GGG | 0.412874 | 8.1:-3487332 | MS.gene035652:CDS |
AAATGTATGGTCGCTGTAGA+AGG | 0.413383 | 8.1:-3483614 | MS.gene035652:intron |
TTAGCCGAATGCACCGAGTA+TGG | 0.414587 | 8.1:+3486327 | None:intergenic |
GAACATGAAATTTCTAAGTC+TGG | 0.415403 | 8.1:-3487337 | None:intergenic |
AAGCTTGCCAACATGGTCAT+TGG | 0.417509 | 8.1:-3486550 | MS.gene035652:CDS |
AAGGAACGAAATCTTCTTGA+AGG | 0.425532 | 8.1:+3482300 | None:intergenic |
AGCTTGCCAACATGGTCATT+GGG | 0.431325 | 8.1:-3486549 | MS.gene035652:CDS |
TGAAAGTGTGCAGTTGCTCT+TGG | 0.431844 | 8.1:-3486051 | MS.gene035652:CDS |
CTGAGAGAAGGAAATCATCT+TGG | 0.432039 | 8.1:-3482119 | MS.gene035652:CDS |
TTGAAGATGGACTCCCTTGA+TGG | 0.437882 | 8.1:-3484612 | MS.gene035652:intron |
ACGTGTTCAAGTGAAGTTCT+TGG | 0.438387 | 8.1:-3482390 | MS.gene035652:CDS |
CTCGTTCATGGCATAGAAGT+TGG | 0.441525 | 8.1:-3484586 | MS.gene035652:CDS |
TCTTGTTGAAGTTGAGTTTG+TGG | 0.446504 | 8.1:+3482548 | None:intergenic |
ATGAAATTTCTAAGTCTGGT+TGG | 0.447499 | 8.1:-3487333 | MS.gene035652:CDS |
GTGCAGTTGCTCTTGGACTT+GGG | 0.447704 | 8.1:-3486044 | MS.gene035652:CDS |
AGGCATCACTGCGCTGCATA+TGG | 0.449962 | 8.1:-3486093 | MS.gene035652:CDS |
ATAAGTGGAAGAGATATATA+TGG | 0.450125 | 8.1:+3484509 | None:intergenic |
CTGCATATGGCAGCATTGAA+TGG | 0.451201 | 8.1:-3486080 | MS.gene035652:CDS |
TTCAATCAATCCGTTTCTAC+AGG | 0.452780 | 8.1:-3482087 | MS.gene035652:CDS |
CTGACTGCTGAGAATGCAAA+TGG | 0.460225 | 8.1:-3484942 | MS.gene035652:CDS |
TGAACACGTGCAAAATGTTA+AGG | 0.461338 | 8.1:+3482404 | None:intergenic |
TTGCATTACTCTGCAGCTCA+TGG | 0.463642 | 8.1:-3487171 | MS.gene035652:CDS |
TTGTTTGGAAAGGAAATGTA+TGG | 0.464104 | 8.1:-3483627 | MS.gene035652:CDS |
ATGGCCATACTCGGTGCATT+CGG | 0.469289 | 8.1:-3486331 | MS.gene035652:CDS |
AAGTTGAGTTTGTGGAACAT+AGG | 0.477507 | 8.1:+3482556 | None:intergenic |
GCACATGGATCTAAGCATAT+AGG | 0.478105 | 8.1:+3483653 | None:intergenic |
CTTTCCAAACAAACTGCACA+TGG | 0.481712 | 8.1:+3483638 | None:intergenic |
AACCAGAACATCTTGTCAAA+TGG | 0.484480 | 8.1:+3482169 | None:intergenic |
CAATCCGTTTCTACAGGAAG+TGG | 0.491465 | 8.1:-3482081 | MS.gene035652:CDS |
GCATCCACTTCCTGTAGAAA+CGG | 0.494458 | 8.1:+3482077 | None:intergenic |
TCTCAGGAATTATCGTGGTC+AGG | 0.496842 | 8.1:-3487010 | MS.gene035652:intron |
GTAATATATCCCAAAAGTTA+GGG | 0.497275 | 8.1:+3486279 | None:intergenic |
CTGCTTTAAATGGCCATACT+CGG | 0.498670 | 8.1:-3486340 | MS.gene035652:CDS |
TGTAGAAACGGATTGATTGA+AGG | 0.498824 | 8.1:+3482089 | None:intergenic |
CACAAAACAGATTACCTGAA+TGG | 0.504700 | 8.1:-3486383 | MS.gene035652:CDS |
GGCCATTTAAAGCAGCCAAA+TGG | 0.505632 | 8.1:+3486348 | None:intergenic |
CATGTGCAGTTTGTTTGGAA+AGG | 0.507634 | 8.1:-3483637 | MS.gene035652:CDS |
TCCCAAAAGTTAGGGACGCT+TGG | 0.509869 | 8.1:+3486287 | None:intergenic |
CTGGTGTTGATATTAATCTC+AGG | 0.518171 | 8.1:-3487026 | MS.gene035652:CDS |
CCAACATGGTCATTGGGAGG+TGG | 0.519366 | 8.1:-3486543 | MS.gene035652:CDS |
TTCCTAACAGAGAATGTGGC+TGG | 0.520240 | 8.1:-3483694 | MS.gene035652:intron |
GTAATTAACAAAACTTCTGA+TGG | 0.523746 | 8.1:-3486116 | MS.gene035652:CDS |
AGCAGTCAGACTAGCACCCT+TGG | 0.529380 | 8.1:+3484956 | None:intergenic |
TCTTCAGCTATTGATTGCCA+AGG | 0.531671 | 8.1:-3484973 | MS.gene035652:intron |
CTTGTGCAAGGAACCAATGA+AGG | 0.533363 | 8.1:+3482216 | None:intergenic |
CATTTAAAGCAGCCAAATGG+AGG | 0.534539 | 8.1:+3486351 | None:intergenic |
CTCCATTATGCAGCATGTGG+TGG | 0.535401 | 8.1:-3485134 | MS.gene035652:CDS |
TGAAGAGAATTGACAACTCA+AGG | 0.535842 | 8.1:+3482281 | None:intergenic |
AGAGGACAAGCTATTGAACC+TGG | 0.537680 | 8.1:+3482513 | None:intergenic |
TCCATTATGCAGCATGTGGT+GGG | 0.544452 | 8.1:-3485133 | MS.gene035652:CDS |
AGGAACGAAATCTTCTTGAA+GGG | 0.546898 | 8.1:+3482301 | None:intergenic |
TGAGCATTGTCAAAATTGCT+AGG | 0.550320 | 8.1:-3484487 | MS.gene035652:intron |
CTAGTTTCTGCAGCAAGAGA+TGG | 0.552390 | 8.1:-3487276 | MS.gene035652:CDS |
GGAAGAGATATATATGGCGA+AGG | 0.561512 | 8.1:+3484515 | None:intergenic |
CTTCAGCTATTGATTGCCAA+GGG | 0.565183 | 8.1:-3484972 | MS.gene035652:intron |
AATATAATCCACGTCTTGCA+AGG | 0.572310 | 8.1:-3487224 | MS.gene035652:CDS |
CCATGAACGAGCAACCATCA+AGG | 0.576241 | 8.1:+3484598 | None:intergenic |
CTTCTATTAGCACTTGTGCA+AGG | 0.580799 | 8.1:+3482204 | None:intergenic |
CAAGTTCTCAAACTGAGAGA+AGG | 0.581676 | 8.1:-3482131 | MS.gene035652:CDS |
ACTATACTGTGGCGACATAG+AGG | 0.581953 | 8.1:+3482495 | None:intergenic |
CGCTTGGTATATAGTCTGCA+AGG | 0.582268 | 8.1:+3486303 | None:intergenic |
TGCAAACCAATAACTTCACG+TGG | 0.583478 | 8.1:-3482339 | MS.gene035652:CDS |
AATAGTAGTTCCATCCTCTA+CGG | 0.584436 | 8.1:+3486001 | None:intergenic |
GTCGAATACCTTGCAAGACG+TGG | 0.585836 | 8.1:+3487216 | None:intergenic |
CATGAACGAGCAACCATCAA+GGG | 0.589970 | 8.1:+3484599 | None:intergenic |
CTTGGGAGCTTCTGTGTCCG+AGG | 0.591035 | 8.1:-3486027 | MS.gene035652:CDS |
TCCGAGGTTACCGTAGAGGA+TGG | 0.591591 | 8.1:-3486011 | MS.gene035652:CDS |
TGGTGATGTTCAAGAGGCGA+AGG | 0.592755 | 8.1:-3487256 | MS.gene035652:CDS |
TCAATTCCTAACAGAGAATG+TGG | 0.598490 | 8.1:-3483698 | MS.gene035652:intron |
TTGATGCAAGCTTGCCAACA+TGG | 0.601264 | 8.1:-3486557 | MS.gene035652:CDS |
CACTACCAAAAGTAATGCAA+AGG | 0.606802 | 8.1:-3482443 | MS.gene035652:CDS |
ATTAACAAAACTTCTGATGG+AGG | 0.611011 | 8.1:-3486113 | MS.gene035652:CDS |
GAGGACAAGCTATTGAACCT+GGG | 0.612469 | 8.1:+3482514 | None:intergenic |
CCACCTCCCAATGACCATGT+TGG | 0.614473 | 8.1:+3486543 | None:intergenic |
TCCATCCTCTACGGTAACCT+CGG | 0.615721 | 8.1:+3486010 | None:intergenic |
GGAACGAAATCTTCTTGAAG+GGG | 0.616699 | 8.1:+3482302 | None:intergenic |
AAGAGATGGTGATGTTCAAG+AGG | 0.619180 | 8.1:-3487262 | MS.gene035652:CDS |
CAATCTCAGAATTTGATCAA+AGG | 0.622386 | 8.1:-3486238 | MS.gene035652:intron |
ATGGCATAGAAGTTGGCTTG+AGG | 0.627590 | 8.1:-3484579 | MS.gene035652:CDS |
TGTGTCCGAGGTTACCGTAG+AGG | 0.631676 | 8.1:-3486015 | MS.gene035652:CDS |
ATTTAAAGCAGCCAAATGGA+GGG | 0.637897 | 8.1:+3486352 | None:intergenic |
TGACTGCTGAGAATGCAAAT+GGG | 0.638673 | 8.1:-3484941 | MS.gene035652:intron |
CATACGAAGTGGTGTTTGTG+AGG | 0.641986 | 8.1:-3486138 | MS.gene035652:intron |
TCAACTTCAACAAGAACACA+TGG | 0.651528 | 8.1:-3482540 | MS.gene035652:CDS |
AGGACAAGCTATTGAACCTG+GGG | 0.651920 | 8.1:+3482515 | None:intergenic |
CCACTCCATTATGCAGCATG+TGG | 0.652184 | 8.1:-3485137 | MS.gene035652:CDS |
AAATGGTGTTGTCATGTCTG+TGG | 0.653781 | 8.1:+3482362 | None:intergenic |
GTGCTAATAGAAGAAACTTG+AGG | 0.655442 | 8.1:-3482194 | MS.gene035652:CDS |
TGAGCTGCAGAGTAATGCAA+AGG | 0.656866 | 8.1:+3487174 | None:intergenic |
CCACATGCTGCATAATGGAG+TGG | 0.671484 | 8.1:+3485137 | None:intergenic |
ACGTGGATTATATTCTAACA+AGG | 0.672327 | 8.1:+3487233 | None:intergenic |
TTGCCAACATGGTCATTGGG+AGG | 0.672352 | 8.1:-3486546 | MS.gene035652:CDS |
AAAACAGATTACCTGAATGG+AGG | 0.674826 | 8.1:-3486380 | MS.gene035652:CDS |
ATTAATCTCAGGAATTATCG+TGG | 0.678184 | 8.1:-3487015 | MS.gene035652:CDS |
GCAACTGCACACTTTCAACA+TGG | 0.678568 | 8.1:+3486057 | None:intergenic |
TGCAGCTCATGGCCACCATG+AGG | 0.682766 | 8.1:-3487160 | MS.gene035652:intron |
CTAACAGAGAATGTGGCTGG+AGG | 0.704497 | 8.1:-3483691 | MS.gene035652:intron |
GGACAAGCTATTGAACCTGG+GGG | 0.729015 | 8.1:+3482516 | None:intergenic |
TGTAAGTATATACCTCATGG+TGG | 0.729691 | 8.1:+3487148 | None:intergenic |
TAACAAATGAGACTATACTG+TGG | 0.749737 | 8.1:+3482484 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTACATATATTAAGTAAT+TGG | - | chr8.1:3486033-3486052 | MS.gene035652:CDS | 10.0% |
!! | TACTCAAATTTATATTTATT+TGG | - | chr8.1:3485259-3485278 | MS.gene035652:intron | 10.0% |
!! | AACATTTATAGAATTCAATT+AGG | - | chr8.1:3484111-3484130 | MS.gene035652:intron | 15.0% |
!! | AAGGTTATTAATTAAATGTT+AGG | + | chr8.1:3484991-3485010 | None:intergenic | 15.0% |
!! | AATATAGTAAATGTTTAGAT+TGG | + | chr8.1:3483877-3483896 | None:intergenic | 15.0% |
!! | ACATTAGAAATTATTGTTAT+TGG | - | chr8.1:3486700-3486719 | MS.gene035652:intron | 15.0% |
!! | ACATTGAAACAAAATAATAT+TGG | + | chr8.1:3482427-3482446 | None:intergenic | 15.0% |
!! | ATATAGTAAATGTTTAGATT+GGG | + | chr8.1:3483876-3483895 | None:intergenic | 15.0% |
!! | TAAAAACTTCATAATCTAAT+AGG | + | chr8.1:3485539-3485558 | None:intergenic | 15.0% |
!! | TTAATAAAATAGCACAAAAT+CGG | + | chr8.1:3482938-3482957 | None:intergenic | 15.0% |
!!! | TAAAATATTGCTTGTTAAAT+TGG | - | chr8.1:3482991-3483010 | MS.gene035652:intron | 15.0% |
!!! | TATTAAAACAATTTTTCACA+TGG | + | chr8.1:3485061-3485080 | None:intergenic | 15.0% |
!! | ACAATAATTTCTAATGTCAT+AGG | + | chr8.1:3486697-3486716 | None:intergenic | 20.0% |
!! | AGATATAGTCAACTAAATTA+AGG | + | chr8.1:3482456-3482475 | None:intergenic | 20.0% |
!! | AGCAAATAATTAGAAAGTAA+TGG | - | chr8.1:3486107-3486126 | MS.gene035652:CDS | 20.0% |
!! | ATAACTAACTTACTTTACAA+TGG | - | chr8.1:3483687-3483706 | MS.gene035652:CDS | 20.0% |
!! | ATTAAATGTTAGGAAGAAAT+TGG | + | chr8.1:3484981-3485000 | None:intergenic | 20.0% |
!! | TATAGTAAATGTTTAGATTG+GGG | + | chr8.1:3483875-3483894 | None:intergenic | 20.0% |
!! | TGAACAAATATAGCATTATT+TGG | + | chr8.1:3485510-3485529 | None:intergenic | 20.0% |
!! | TTATGATCTATTTAGATCAT+AGG | - | chr8.1:3484573-3484592 | MS.gene035652:CDS | 20.0% |
!!! | AATTTCTACTAGAGTATTTT+GGG | + | chr8.1:3486493-3486512 | None:intergenic | 20.0% |
!!! | ATATGATAAATTGATAATGC+AGG | - | chr8.1:3486792-3486811 | MS.gene035652:intron | 20.0% |
!!! | ATGTTTTTTCCATTTGTTTT+TGG | + | chr8.1:3486153-3486172 | None:intergenic | 20.0% |
!!! | ATTGGCTTTAAAAATAATCA+GGG | + | chr8.1:3482896-3482915 | None:intergenic | 20.0% |
!!! | TAGTATCGTAGAATTTTATT+CGG | + | chr8.1:3485230-3485249 | None:intergenic | 20.0% |
!!! | TATTGATTTTGTTTTGAAGA+TGG | - | chr8.1:3484782-3484801 | MS.gene035652:intron | 20.0% |
!!! | TATTTTTATTTACAGGTTCT+GGG | - | chr8.1:3484241-3484260 | MS.gene035652:intron | 20.0% |
!!! | TCAAATTTTATGTATTCCAA+AGG | - | chr8.1:3485645-3485664 | MS.gene035652:intron | 20.0% |
!!! | TGCTATCTATTTTTATTTAC+AGG | - | chr8.1:3484234-3484253 | MS.gene035652:intron | 20.0% |
! | AAAATGAAACAGTCTTCTAA+AGG | + | chr8.1:3484333-3484352 | None:intergenic | 25.0% |
! | AAAATGCTTCATGTTTAAAG+CGG | - | chr8.1:3484178-3484197 | MS.gene035652:intron | 25.0% |
! | AACTGATTATACTTTGAATG+CGG | - | chr8.1:3485179-3485198 | MS.gene035652:intron | 25.0% |
! | AAGTTAATTCTGTCTTTGAA+TGG | - | chr8.1:3483243-3483262 | MS.gene035652:intron | 25.0% |
! | AATGTGTAGAATGTAGATAA+TGG | + | chr8.1:3483983-3484002 | None:intergenic | 25.0% |
! | AATTGTAAGTATATACCTCA+TGG | + | chr8.1:3482265-3482284 | None:intergenic | 25.0% |
! | ACACTAAACCAATATTGTTA+AGG | - | chr8.1:3486657-3486676 | MS.gene035652:intron | 25.0% |
! | AGATCAAACTAGTTAACTTA+GGG | + | chr8.1:3484206-3484225 | None:intergenic | 25.0% |
! | AGATCAATAATAGTAACCTT+TGG | + | chr8.1:3485664-3485683 | None:intergenic | 25.0% |
! | ATAAGTGGAAGAGATATATA+TGG | + | chr8.1:3484901-3484920 | None:intergenic | 25.0% |
! | ATAGTAAATGTTTAGATTGG+GGG | + | chr8.1:3483874-3483893 | None:intergenic | 25.0% |
! | CATATATTAAGTAATTGGTC+AGG | - | chr8.1:3486038-3486057 | MS.gene035652:CDS | 25.0% |
! | CATCAATATTGTTCAACATT+TGG | - | chr8.1:3483626-3483645 | MS.gene035652:CDS | 25.0% |
! | GAATAAAATTCTACGATACT+AGG | - | chr8.1:3485229-3485248 | MS.gene035652:intron | 25.0% |
! | GCATTGAGTGTAAATTAAAA+GGG | + | chr8.1:3485826-3485845 | None:intergenic | 25.0% |
! | GTAAAATTATAAACCAGTAG+AGG | + | chr8.1:3486408-3486427 | None:intergenic | 25.0% |
! | GTAATATATCCCAAAAGTTA+GGG | + | chr8.1:3483131-3483150 | None:intergenic | 25.0% |
! | GTAATTAACAAAACTTCTGA+TGG | - | chr8.1:3483291-3483310 | MS.gene035652:intron | 25.0% |
! | TAAAAATAGATAGCAGTTAG+TGG | + | chr8.1:3484229-3484248 | None:intergenic | 25.0% |
! | TAACCTTTCAAGATTGATAT+TGG | - | chr8.1:3485004-3485023 | MS.gene035652:intron | 25.0% |
! | TAGATGAGTTTAGTCATTTA+AGG | - | chr8.1:3485403-3485422 | MS.gene035652:intron | 25.0% |
! | TCGTAGTAAGTTAAAAACAA+GGG | + | chr8.1:3484617-3484636 | None:intergenic | 25.0% |
! | TGAACAATATTGATGAGAAA+TGG | + | chr8.1:3483621-3483640 | None:intergenic | 25.0% |
! | TGTAATATATCCCAAAAGTT+AGG | + | chr8.1:3483132-3483151 | None:intergenic | 25.0% |
! | TTGCCAATAAAAATACAAAG+AGG | + | chr8.1:3486450-3486469 | None:intergenic | 25.0% |
!! | AGCATTGAGTGTAAATTAAA+AGG | + | chr8.1:3485827-3485846 | None:intergenic | 25.0% |
!! | AGGAAGAACTTGTAAATTTT+CGG | + | chr8.1:3484875-3484894 | None:intergenic | 25.0% |
!! | ATTTTCTCTTATGTAGTACA+GGG | + | chr8.1:3484163-3484182 | None:intergenic | 25.0% |
!! | TCTACTTTGAATGTATTTTC+TGG | + | chr8.1:3485949-3485968 | None:intergenic | 25.0% |
!! | TTAGAAGACTGTTTCATTTT+AGG | - | chr8.1:3484333-3484352 | MS.gene035652:intron | 25.0% |
!! | TTGGATATGTTTTCTACAAA+TGG | - | chr8.1:3486062-3486081 | MS.gene035652:CDS | 25.0% |
!! | TTTTACATGGAAAAATGATC+TGG | - | chr8.1:3485858-3485877 | MS.gene035652:intron | 25.0% |
!!! | AGCATCATTTGATTTTAACA+AGG | - | chr8.1:3485087-3485106 | MS.gene035652:intron | 25.0% |
!!! | ATGTAGATAATGGAATATGA+TGG | + | chr8.1:3483973-3483992 | None:intergenic | 25.0% |
!!! | ATTTTGCAAGTGTTTCTATA+TGG | - | chr8.1:3486243-3486262 | MS.gene035652:CDS | 25.0% |
!!! | CAATTTCTACTAGAGTATTT+TGG | + | chr8.1:3486494-3486513 | None:intergenic | 25.0% |
!!! | CATTGGCTTTAAAAATAATC+AGG | + | chr8.1:3482897-3482916 | None:intergenic | 25.0% |
!!! | CTACCTCTTTGTATTTTTAT+TGG | - | chr8.1:3486444-3486463 | MS.gene035652:intron | 25.0% |
!!! | CTATTTTTATTTACAGGTTC+TGG | - | chr8.1:3484240-3484259 | MS.gene035652:intron | 25.0% |
!!! | CTTCAAACTTTTGTTGTTTT+GGG | - | chr8.1:3482745-3482764 | MS.gene035652:intron | 25.0% |
!!! | GGAACTACTATTGATTTAAT+TGG | - | chr8.1:3483417-3483436 | MS.gene035652:intron | 25.0% |
AAACACGATACAAGAAAATG+AGG | + | chr8.1:3482295-3482314 | None:intergenic | 30.0% | |
AACCTTTGAATCAATGGTAA+AGG | - | chr8.1:3486199-3486218 | MS.gene035652:intron | 30.0% | |
AAGAGGTAGATGACAAAATA+TGG | + | chr8.1:3486433-3486452 | None:intergenic | 30.0% | |
AAGTTAAAAACAAGGGGTAA+AGG | + | chr8.1:3484610-3484629 | None:intergenic | 30.0% | |
AATAAAAACTGAGCAATGTC+TGG | + | chr8.1:3486301-3486320 | None:intergenic | 30.0% | |
AATGACAACCTTTGAATCAA+TGG | - | chr8.1:3486193-3486212 | MS.gene035652:intron | 30.0% | |
ACATAACTATGCTTCTTTGT+TGG | - | chr8.1:3486169-3486188 | MS.gene035652:intron | 30.0% | |
AGAGGTAGATGACAAAATAT+GGG | + | chr8.1:3486432-3486451 | None:intergenic | 30.0% | |
AGATTCACTATCTATCGTAT+TGG | - | chr8.1:3484636-3484655 | MS.gene035652:intron | 30.0% | |
ATCACTTAATCACATGAACT+AGG | + | chr8.1:3483459-3483478 | None:intergenic | 30.0% | |
ATGAAATTTCTAAGTCTGGT+TGG | - | chr8.1:3482074-3482093 | MS.gene035652:CDS | 30.0% | |
ATGTTTCTTTCGTTTACAGA+GGG | - | chr8.1:3482781-3482800 | MS.gene035652:intron | 30.0% | |
ATTAACAAAACTTCTGATGG+AGG | - | chr8.1:3483294-3483313 | MS.gene035652:intron | 30.0% | |
ATTAATCTCAGGAATTATCG+TGG | - | chr8.1:3482392-3482411 | MS.gene035652:CDS | 30.0% | |
ATTTAGAAGTAGGTGAAAGA+GGG | + | chr8.1:3484069-3484088 | None:intergenic | 30.0% | |
CAACCAATATCAATCTTGAA+AGG | + | chr8.1:3485010-3485029 | None:intergenic | 30.0% | |
CAAGCACTATGTATCTTAAA+TGG | - | chr8.1:3484736-3484755 | MS.gene035652:intron | 30.0% | |
CAATCTCAGAATTTGATCAA+AGG | - | chr8.1:3483169-3483188 | MS.gene035652:intron | 30.0% | |
CATGTGATTATGTGCATATT+TGG | - | chr8.1:3485290-3485309 | MS.gene035652:intron | 30.0% | |
CGTAGTAAGTTAAAAACAAG+GGG | + | chr8.1:3484616-3484635 | None:intergenic | 30.0% | |
CTCGTAGTAAGTTAAAAACA+AGG | + | chr8.1:3484618-3484637 | None:intergenic | 30.0% | |
CTTACTGCAACAGTTTATAA+TGG | + | chr8.1:3483226-3483245 | None:intergenic | 30.0% | |
CTTAGTAAACATTAGACAAG+AGG | + | chr8.1:3484016-3484035 | None:intergenic | 30.0% | |
GAGATCAAACTAGTTAACTT+AGG | + | chr8.1:3484207-3484226 | None:intergenic | 30.0% | |
GAGTTAGAGATCTTCAATAT+AGG | - | chr8.1:3485315-3485334 | MS.gene035652:intron | 30.0% | |
GATCAAACTAGTTAACTTAG+GGG | + | chr8.1:3484205-3484224 | None:intergenic | 30.0% | |
GTTTAGTGTTTGAATTGACA+AGG | + | chr8.1:3486646-3486665 | None:intergenic | 30.0% | |
TAACAAATGAGACTATACTG+TGG | + | chr8.1:3486926-3486945 | None:intergenic | 30.0% | |
TAACTTACTTTACAATGGCT+TGG | - | chr8.1:3483692-3483711 | MS.gene035652:intron | 30.0% | |
TACTGCTAAGATTTAGAAGT+AGG | + | chr8.1:3484079-3484098 | None:intergenic | 30.0% | |
TAGTAAATGTTTAGATTGGG+GGG | + | chr8.1:3483873-3483892 | None:intergenic | 30.0% | |
TGAAATTTCTAAGTCTGGTT+GGG | - | chr8.1:3482075-3482094 | MS.gene035652:CDS | 30.0% | |
TGGCACAATAAAATTTGTAG+TGG | - | chr8.1:3483712-3483731 | MS.gene035652:intron | 30.0% | |
TTGCAAAATACGTTTCTCTA+TGG | + | chr8.1:3486232-3486251 | None:intergenic | 30.0% | |
TTGCAGTAATGATCTTACAT+TGG | + | chr8.1:3482914-3482933 | None:intergenic | 30.0% | |
TTGTTTGGAAAGGAAATGTA+TGG | - | chr8.1:3485780-3485799 | MS.gene035652:intron | 30.0% | |
! | AACTTACCTTATTTACAGCT+TGG | - | chr8.1:3484531-3484550 | MS.gene035652:CDS | 30.0% |
! | ACGTGGATTATATTCTAACA+AGG | + | chr8.1:3482177-3482196 | None:intergenic | 30.0% |
! | CATTTTCTCTTATGTAGTAC+AGG | + | chr8.1:3484164-3484183 | None:intergenic | 30.0% |
! | GAAATTGGTTGAATTTTGAG+AGG | + | chr8.1:3484966-3484985 | None:intergenic | 30.0% |
! | GTGTACGTTTGTTAAAATCA+TGG | - | chr8.1:3483820-3483839 | MS.gene035652:intron | 30.0% |
! | TACGTTTGTTAAAATCATGG+TGG | - | chr8.1:3483823-3483842 | MS.gene035652:intron | 30.0% |
! | TATAGGTTTTGCCAATACTT+TGG | - | chr8.1:3485332-3485351 | MS.gene035652:intron | 30.0% |
! | TGAGGATAGATAAACAGTTT+TGG | + | chr8.1:3483905-3483924 | None:intergenic | 30.0% |
! | TGCTAGATCAATGTTTTCAA+AGG | + | chr8.1:3482679-3482698 | None:intergenic | 30.0% |
! | TTATTTTCCATGAACGTGTT+TGG | - | chr8.1:3486316-3486335 | MS.gene035652:CDS | 30.0% |
! | TTTTCAAATTGTGCCTATAC+CGG | - | chr8.1:3482605-3482624 | MS.gene035652:intron | 30.0% |
! | TTTTCTCTTATGTAGTACAG+GGG | + | chr8.1:3484162-3484181 | None:intergenic | 30.0% |
!! | ATTTTGACAATGCTCATAAG+TGG | + | chr8.1:3484916-3484935 | None:intergenic | 30.0% |
!! | CTGATATAGATGGTTTTACA+TGG | - | chr8.1:3485845-3485864 | MS.gene035652:intron | 30.0% |
!! | CTTTTGGAAACTTGCATAAT+TGG | - | chr8.1:3483564-3483583 | MS.gene035652:intron | 30.0% |
!! | GAAGTTATTGGTTTGCAAAA+TGG | + | chr8.1:3487065-3487084 | None:intergenic | 30.0% |
!! | GATAATGGAATATGATGGAA+AGG | + | chr8.1:3483968-3483987 | None:intergenic | 30.0% |
!! | GTGCTTCTTCATTTTTCTTT+TGG | - | chr8.1:3483548-3483567 | MS.gene035652:intron | 30.0% |
!! | GTTATTGGCTTAAAAAGTGT+TGG | - | chr8.1:3486715-3486734 | MS.gene035652:intron | 30.0% |
!! | TTCCTTTACCATTGATTCAA+AGG | + | chr8.1:3486204-3486223 | None:intergenic | 30.0% |
!!! | GCTTCAAACTTTTGTTGTTT+TGG | - | chr8.1:3482744-3482763 | MS.gene035652:intron | 30.0% |
!!! | TTTTGGGATATATTACAGAC+AGG | - | chr8.1:3483135-3483154 | MS.gene035652:intron | 30.0% |
AAAACAGATTACCTGAATGG+AGG | - | chr8.1:3483027-3483046 | MS.gene035652:intron | 35.0% | |
AACATGCCAAGCTGTAAATA+AGG | + | chr8.1:3484540-3484559 | None:intergenic | 35.0% | |
AACCAGAACATCTTGTCAAA+TGG | + | chr8.1:3487241-3487260 | None:intergenic | 35.0% | |
AACCATTTGACAAGATGTTC+TGG | - | chr8.1:3487236-3487255 | MS.gene035652:CDS | 35.0% | |
AAGGAACGAAATCTTCTTGA+AGG | + | chr8.1:3487110-3487129 | None:intergenic | 35.0% | |
AAGTTGAGTTTGTGGAACAT+AGG | + | chr8.1:3486854-3486873 | None:intergenic | 35.0% | |
AATAGTAGTTCCATCCTCTA+CGG | + | chr8.1:3483409-3483428 | None:intergenic | 35.0% | |
AATATAATCCACGTCTTGCA+AGG | - | chr8.1:3482183-3482202 | MS.gene035652:CDS | 35.0% | |
AATATTGATGAGAAATGGCC+AGG | + | chr8.1:3483616-3483635 | None:intergenic | 35.0% | |
ACACTCAATGCTGATATAGA+TGG | - | chr8.1:3485835-3485854 | MS.gene035652:intron | 35.0% | |
AGGAACGAAATCTTCTTGAA+GGG | + | chr8.1:3487109-3487128 | None:intergenic | 35.0% | |
ATAACAACATACGCAAGAAG+AGG | + | chr8.1:3485690-3485709 | None:intergenic | 35.0% | |
ATATTGATGAGAAATGGCCA+GGG | + | chr8.1:3483615-3483634 | None:intergenic | 35.0% | |
ATCTCTCCAAACCAAAGTAT+TGG | + | chr8.1:3485346-3485365 | None:intergenic | 35.0% | |
ATTAAGTAATTGGTCAGGCT+TGG | - | chr8.1:3486043-3486062 | MS.gene035652:CDS | 35.0% | |
ATTCAACTGCAACTCATGTT+TGG | - | chr8.1:3483740-3483759 | MS.gene035652:intron | 35.0% | |
CACAAAACAGATTACCTGAA+TGG | - | chr8.1:3483024-3483043 | MS.gene035652:intron | 35.0% | |
CACTACCAAAAGTAATGCAA+AGG | - | chr8.1:3486964-3486983 | MS.gene035652:intron | 35.0% | |
CATGTTTCTTTCGTTTACAG+AGG | - | chr8.1:3482780-3482799 | MS.gene035652:intron | 35.0% | |
CCAAACATGCATTGAATTGA+TGG | + | chr8.1:3486527-3486546 | None:intergenic | 35.0% | |
CCATCAATTCAATGCATGTT+TGG | - | chr8.1:3486524-3486543 | MS.gene035652:CDS | 35.0% | |
CTCTGTAAACGAAAGAAACA+TGG | + | chr8.1:3482782-3482801 | None:intergenic | 35.0% | |
GAGCAGAGTCAATAAATTCA+TGG | + | chr8.1:3485123-3485142 | None:intergenic | 35.0% | |
GATTTAGAAGTAGGTGAAAG+AGG | + | chr8.1:3484070-3484089 | None:intergenic | 35.0% | |
GGTATGACAAAATTGTGCAT+AGG | + | chr8.1:3486625-3486644 | None:intergenic | 35.0% | |
GTGCTAATAGAAGAAACTTG+AGG | - | chr8.1:3487213-3487232 | MS.gene035652:CDS | 35.0% | |
GTTCACACACCAAAAACAAA+TGG | - | chr8.1:3486141-3486160 | MS.gene035652:intron | 35.0% | |
GTTTGTGGAACATAGGTATA+AGG | + | chr8.1:3486847-3486866 | None:intergenic | 35.0% | |
TAACAACATACGCAAGAAGA+GGG | + | chr8.1:3485689-3485708 | None:intergenic | 35.0% | |
TCAACAAAATCACGTTGTCA+TGG | + | chr8.1:3486575-3486594 | None:intergenic | 35.0% | |
TCAACTTCAACAAGAACACA+TGG | - | chr8.1:3486867-3486886 | MS.gene035652:intron | 35.0% | |
TCAATTCCTAACAGAGAATG+TGG | - | chr8.1:3485709-3485728 | MS.gene035652:intron | 35.0% | |
TCTAATGTCATAGGTCTATG+AGG | + | chr8.1:3486688-3486707 | None:intergenic | 35.0% | |
TCTTGAAGGGGAAGAAAATT+TGG | + | chr8.1:3487096-3487115 | None:intergenic | 35.0% | |
TCTTGTTGAAGTTGAGTTTG+TGG | + | chr8.1:3486862-3486881 | None:intergenic | 35.0% | |
TGAACACGTGCAAAATGTTA+AGG | + | chr8.1:3487006-3487025 | None:intergenic | 35.0% | |
TGAAGAGAATTGACAACTCA+AGG | + | chr8.1:3487129-3487148 | None:intergenic | 35.0% | |
TGTAAGTATATACCTCATGG+TGG | + | chr8.1:3482262-3482281 | None:intergenic | 35.0% | |
TTCAATCAATCCGTTTCTAC+AGG | - | chr8.1:3487320-3487339 | MS.gene035652:CDS | 35.0% | |
! | AGAACTTGTAAATTTTCGGC+TGG | + | chr8.1:3484871-3484890 | None:intergenic | 35.0% |
! | AGGTGTCACCTTAACAATAT+TGG | + | chr8.1:3486668-3486687 | None:intergenic | 35.0% |
! | ATGTTTTCAAAGGCAAATCG+CGG | + | chr8.1:3482669-3482688 | None:intergenic | 35.0% |
! | ATTTAAAGCAGCCAAATGGA+GGG | + | chr8.1:3483058-3483077 | None:intergenic | 35.0% |
! | CTCAACTCTAGTCTTTGTTT+AGG | - | chr8.1:3487155-3487174 | MS.gene035652:intron | 35.0% |
! | GAAAAATGAAGAAGCACACA+TGG | + | chr8.1:3483545-3483564 | None:intergenic | 35.0% |
! | GTTGTCCTTTGCATTACTTT+TGG | + | chr8.1:3486972-3486991 | None:intergenic | 35.0% |
! | GTTTTGCCAATACTTTGGTT+TGG | - | chr8.1:3485337-3485356 | MS.gene035652:intron | 35.0% |
! | TGAGCATTGTCAAAATTGCT+AGG | - | chr8.1:3484920-3484939 | MS.gene035652:intron | 35.0% |
! | TTGCAAGTGTTTCTATATGG+AGG | - | chr8.1:3486246-3486265 | MS.gene035652:CDS | 35.0% |
!! | AGATACTTGCTTTGGAAAGT+CGG | - | chr8.1:3483482-3483501 | MS.gene035652:intron | 35.0% |
!! | CTGGTGTTGATATTAATCTC+AGG | - | chr8.1:3482381-3482400 | MS.gene035652:CDS | 35.0% |
!! | CTTTGCATTACTTTTGGTAG+TGG | + | chr8.1:3486966-3486985 | None:intergenic | 35.0% |
!! | TGTAGAAACGGATTGATTGA+AGG | + | chr8.1:3487321-3487340 | None:intergenic | 35.0% |
!! | TTCTATATGGAGGTATTGCA+CGG | - | chr8.1:3486256-3486275 | MS.gene035652:CDS | 35.0% |
!! | TTGGTTGAATTTTGAGAGGA+TGG | + | chr8.1:3484962-3484981 | None:intergenic | 35.0% |
!!! | GTATTTTGGGTTCTAATGTG+TGG | + | chr8.1:3486480-3486499 | None:intergenic | 35.0% |
AAAAACTGAGCAATGTCTGG+TGG | + | chr8.1:3486298-3486317 | None:intergenic | 40.0% | |
AAATGTATGGTCGCTGTAGA+AGG | - | chr8.1:3485793-3485812 | MS.gene035652:intron | 40.0% | |
AATCAGTTAAATCCACCTGC+TGG | + | chr8.1:3485167-3485186 | None:intergenic | 40.0% | |
ACGTGTTCAAGTGAAGTTCT+TGG | - | chr8.1:3487017-3487036 | MS.gene035652:CDS | 40.0% | |
ACTGCAACTCATGTTTGGAT+TGG | - | chr8.1:3483745-3483764 | MS.gene035652:intron | 40.0% | |
AGCTGATGTTACTCCTTCAT+TGG | - | chr8.1:3487178-3487197 | MS.gene035652:CDS | 40.0% | |
ATGTTTACTAAGCACAGCCT+TGG | - | chr8.1:3484024-3484043 | MS.gene035652:intron | 40.0% | |
ATTGCAATGTCAAGGAAGCT+TGG | - | chr8.1:3485915-3485934 | MS.gene035652:intron | 40.0% | |
CAAGTTCTCAAACTGAGAGA+AGG | - | chr8.1:3487276-3487295 | MS.gene035652:CDS | 40.0% | |
CACAACAGATTGATGGAGTT+TGG | - | chr8.1:3482539-3482558 | MS.gene035652:CDS | 40.0% | |
CTGAGAGAAGGAAATCATCT+TGG | - | chr8.1:3487288-3487307 | MS.gene035652:CDS | 40.0% | |
CTTCTATTAGCACTTGTGCA+AGG | + | chr8.1:3487206-3487225 | None:intergenic | 40.0% | |
CTTTCCAAACAAACTGCACA+TGG | + | chr8.1:3485772-3485791 | None:intergenic | 40.0% | |
GCACATGGATCTAAGCATAT+AGG | + | chr8.1:3485757-3485776 | None:intergenic | 40.0% | |
GCTATAGCACAACAGATTGA+TGG | - | chr8.1:3482532-3482551 | MS.gene035652:CDS | 40.0% | |
GGAAACAATCGAGAGATAGT+AGG | + | chr8.1:3483518-3483537 | None:intergenic | 40.0% | |
GGAACGAAATCTTCTTGAAG+GGG | + | chr8.1:3487108-3487127 | None:intergenic | 40.0% | |
GGAAGAGATATATATGGCGA+AGG | + | chr8.1:3484895-3484914 | None:intergenic | 40.0% | |
GTGATGTCAGATACTTGCTT+TGG | - | chr8.1:3483474-3483493 | MS.gene035652:intron | 40.0% | |
GTGCAACAATTGCAATGTCA+AGG | - | chr8.1:3485907-3485926 | MS.gene035652:intron | 40.0% | |
TATCCTCATATAGCATGAGC+TGG | - | chr8.1:3483917-3483936 | MS.gene035652:intron | 40.0% | |
TGACTGCTGAGAATGCAAAT+GGG | - | chr8.1:3484466-3484485 | MS.gene035652:intron | 40.0% | |
TGAGTTTGAACAAATCACGC+TGG | - | chr8.1:3483771-3483790 | MS.gene035652:intron | 40.0% | |
TGCAAACCAATAACTTCACG+TGG | - | chr8.1:3487068-3487087 | MS.gene035652:intron | 40.0% | |
TGGAAGAGAAAAGGATCACA+TGG | + | chr8.1:3486350-3486369 | None:intergenic | 40.0% | |
TTGAATGGTTGCATACGAAG+TGG | - | chr8.1:3483258-3483277 | MS.gene035652:intron | 40.0% | |
TTGGATCCACGTGAAGTTAT+TGG | + | chr8.1:3487077-3487096 | None:intergenic | 40.0% | |
TTTGACACCAAACACGTTCA+TGG | + | chr8.1:3486326-3486345 | None:intergenic | 40.0% | |
! | AAGAGATGGTGATGTTCAAG+AGG | - | chr8.1:3482145-3482164 | MS.gene035652:CDS | 40.0% |
! | ACAGCAGCTTTGGTCTTTAT+GGG | - | chr8.1:3485030-3485049 | MS.gene035652:intron | 40.0% |
! | ACTTGTAAATTTTCGGCTGG+AGG | + | chr8.1:3484868-3484887 | None:intergenic | 40.0% |
! | AGATCCATGTGCAGTTTGTT+TGG | - | chr8.1:3485765-3485784 | MS.gene035652:intron | 40.0% |
! | AGTCTGGTTGGGAATTCTTT+TGG | - | chr8.1:3482086-3482105 | MS.gene035652:CDS | 40.0% |
! | ATATTGGTTGACAGCAGCTT+TGG | - | chr8.1:3485020-3485039 | MS.gene035652:intron | 40.0% |
! | CATGTGCAGTTTGTTTGGAA+AGG | - | chr8.1:3485770-3485789 | MS.gene035652:intron | 40.0% |
! | CATTTAAAGCAGCCAAATGG+AGG | + | chr8.1:3483059-3483078 | None:intergenic | 40.0% |
! | CTCCATTTGGCTGCTTTAAA+TGG | - | chr8.1:3483057-3483076 | MS.gene035652:intron | 40.0% |
! | CTGCTTTAAATGGCCATACT+CGG | - | chr8.1:3483067-3483086 | MS.gene035652:intron | 40.0% |
! | CTTCAGCTATTGATTGCCAA+GGG | - | chr8.1:3484435-3484454 | MS.gene035652:intron | 40.0% |
! | CTTTTGGATGTTCTGCATCT+GGG | - | chr8.1:3482102-3482121 | MS.gene035652:CDS | 40.0% |
! | TCTTCAGCTATTGATTGCCA+AGG | - | chr8.1:3484434-3484453 | MS.gene035652:intron | 40.0% |
! | TCTTTTGGATGTTCTGCATC+TGG | - | chr8.1:3482101-3482120 | MS.gene035652:CDS | 40.0% |
! | TGAAGAAGCACACATGGATA+TGG | + | chr8.1:3483539-3483558 | None:intergenic | 40.0% |
! | TTTTGGATGTTCTGCATCTG+GGG | - | chr8.1:3482103-3482122 | MS.gene035652:CDS | 40.0% |
!! | AAATGGTGTTGTCATGTCTG+TGG | + | chr8.1:3487048-3487067 | None:intergenic | 40.0% |
!! | CTTGCAAGGTATTCGACTTT+TGG | - | chr8.1:3482197-3482216 | MS.gene035652:CDS | 40.0% |
!! | TTGACAAGATGTTCTGGTTC+TGG | - | chr8.1:3487242-3487261 | MS.gene035652:CDS | 40.0% |
!!! | AGATGTTCTGGTTCTGGTTT+TGG | - | chr8.1:3487248-3487267 | MS.gene035652:CDS | 40.0% |
AAAAACCCACTCAGACACCA+AGG | + | chr8.1:3484044-3484063 | None:intergenic | 45.0% | |
AAGCTTGCCAACATGGTCAT+TGG | - | chr8.1:3482857-3482876 | MS.gene035652:intron | 45.0% | |
ACTATACTGTGGCGACATAG+AGG | + | chr8.1:3486915-3486934 | None:intergenic | 45.0% | |
AGAGGACAAGCTATTGAACC+TGG | + | chr8.1:3486897-3486916 | None:intergenic | 45.0% | |
AGCTTGCCAACATGGTCATT+GGG | - | chr8.1:3482858-3482877 | MS.gene035652:intron | 45.0% | |
AGGACAAGCTATTGAACCTG+GGG | + | chr8.1:3486895-3486914 | None:intergenic | 45.0% | |
CAATCCGTTTCTACAGGAAG+TGG | - | chr8.1:3487326-3487345 | MS.gene035652:CDS | 45.0% | |
CATACGAAGTGGTGTTTGTG+AGG | - | chr8.1:3483269-3483288 | MS.gene035652:intron | 45.0% | |
CATGAACGAGCAACCATCAA+GGG | + | chr8.1:3484811-3484830 | None:intergenic | 45.0% | |
CGCTTGGTATATAGTCTGCA+AGG | + | chr8.1:3483107-3483126 | None:intergenic | 45.0% | |
CTAGTTTCTGCAGCAAGAGA+TGG | - | chr8.1:3482131-3482150 | MS.gene035652:CDS | 45.0% | |
CTCGTTCATGGCATAGAAGT+TGG | - | chr8.1:3484821-3484840 | MS.gene035652:intron | 45.0% | |
CTGACTGCTGAGAATGCAAA+TGG | - | chr8.1:3484465-3484484 | MS.gene035652:intron | 45.0% | |
CTTCCAGCTCATGCTATATG+AGG | + | chr8.1:3483923-3483942 | None:intergenic | 45.0% | |
CTTGTGCAAGGAACCAATGA+AGG | + | chr8.1:3487194-3487213 | None:intergenic | 45.0% | |
GAGGACAAGCTATTGAACCT+GGG | + | chr8.1:3486896-3486915 | None:intergenic | 45.0% | |
GCAACTGCACACTTTCAACA+TGG | + | chr8.1:3483353-3483372 | None:intergenic | 45.0% | |
GCATCCACTTCCTGTAGAAA+CGG | + | chr8.1:3487333-3487352 | None:intergenic | 45.0% | |
GTGTATCTCTTGCTTGAGTC+TGG | - | chr8.1:3482362-3482381 | MS.gene035652:CDS | 45.0% | |
TCCATTATGCAGCATGTGGT+GGG | - | chr8.1:3484274-3484293 | MS.gene035652:intron | 45.0% | |
TCTCAGGAATTATCGTGGTC+AGG | - | chr8.1:3482397-3482416 | MS.gene035652:CDS | 45.0% | |
TCTTCGACTTCAACCTCTAC+TGG | - | chr8.1:3486392-3486411 | MS.gene035652:intron | 45.0% | |
TGAGCTGCAGAGTAATGCAA+AGG | + | chr8.1:3482236-3482255 | None:intergenic | 45.0% | |
TTCCTAACAGAGAATGTGGC+TGG | - | chr8.1:3485713-3485732 | MS.gene035652:intron | 45.0% | |
TTGAACAAATCACGCTGGCA+CGG | - | chr8.1:3483776-3483795 | MS.gene035652:intron | 45.0% | |
TTGATGCAAGCTTGCCAACA+TGG | - | chr8.1:3482850-3482869 | MS.gene035652:intron | 45.0% | |
TTGCATTACTCTGCAGCTCA+TGG | - | chr8.1:3482236-3482255 | MS.gene035652:CDS | 45.0% | |
TTTAGATTGGGGGGTGAGAT+TGG | + | chr8.1:3483864-3483883 | None:intergenic | 45.0% | |
! | ACCAAGCGTCCCTAACTTTT+GGG | - | chr8.1:3483119-3483138 | MS.gene035652:intron | 45.0% |
! | AGTTTGTTTGCCTTTGCGCT+GGG | + | chr8.1:3485370-3485389 | None:intergenic | 45.0% |
! | CAATGTCTGGTGGTGAGAAA+GGG | + | chr8.1:3486288-3486307 | None:intergenic | 45.0% |
! | CTGCATATGGCAGCATTGAA+TGG | - | chr8.1:3483327-3483346 | MS.gene035652:intron | 45.0% |
! | GACAGCAGCTTTGGTCTTTA+TGG | - | chr8.1:3485029-3485048 | MS.gene035652:intron | 45.0% |
! | GGCCATTTAAAGCAGCCAAA+TGG | + | chr8.1:3483062-3483081 | None:intergenic | 45.0% |
! | TACCAAGCGTCCCTAACTTT+TGG | - | chr8.1:3483118-3483137 | MS.gene035652:intron | 45.0% |
! | TGAAAGTGTGCAGTTGCTCT+TGG | - | chr8.1:3483356-3483375 | MS.gene035652:intron | 45.0% |
! | TTCGGCTGGAGGTTCTTTTA+AGG | + | chr8.1:3484857-3484876 | None:intergenic | 45.0% |
! | TTGAAGATGGACTCCCTTGA+TGG | - | chr8.1:3484795-3484814 | MS.gene035652:intron | 45.0% |
!! | ATGGCATAGAAGTTGGCTTG+AGG | - | chr8.1:3484828-3484847 | MS.gene035652:intron | 45.0% |
!! | TAGTTTGTTTGCCTTTGCGC+TGG | + | chr8.1:3485371-3485390 | None:intergenic | 45.0% |
!! | TTTGGTAGTGGTCTTGTGTC+TGG | + | chr8.1:3486954-3486973 | None:intergenic | 45.0% |
AATGGCCAGGGTGTGTATGT+AGG | + | chr8.1:3483603-3483622 | None:intergenic | 50.0% | |
AGGCAAATCGCGGAGAATAG+TGG | + | chr8.1:3482659-3482678 | None:intergenic | 50.0% | |
CCAAACCTACATACACACCC+TGG | - | chr8.1:3483595-3483614 | MS.gene035652:intron | 50.0% | |
CCACTCCATTATGCAGCATG+TGG | - | chr8.1:3484270-3484289 | MS.gene035652:intron | 50.0% | |
CCAGGGTGTGTATGTAGGTT+TGG | + | chr8.1:3483598-3483617 | None:intergenic | 50.0% | |
CCATGAACGAGCAACCATCA+AGG | + | chr8.1:3484812-3484831 | None:intergenic | 50.0% | |
CTAACAGAGAATGTGGCTGG+AGG | - | chr8.1:3485716-3485735 | MS.gene035652:intron | 50.0% | |
CTCCAGCCACATTCTCTGTT+AGG | + | chr8.1:3485718-3485737 | None:intergenic | 50.0% | |
CTCCATTATGCAGCATGTGG+TGG | - | chr8.1:3484273-3484292 | MS.gene035652:intron | 50.0% | |
GAGATTGGCAGAATCACGGA+GGG | + | chr8.1:3483849-3483868 | None:intergenic | 50.0% | |
GGACAAGCTATTGAACCTGG+GGG | + | chr8.1:3486894-3486913 | None:intergenic | 50.0% | |
GGGTGAGATTGGCAGAATCA+CGG | + | chr8.1:3483853-3483872 | None:intergenic | 50.0% | |
GTCGAATACCTTGCAAGACG+TGG | + | chr8.1:3482194-3482213 | None:intergenic | 50.0% | |
GTGCAGTTGCTCTTGGACTT+GGG | - | chr8.1:3483363-3483382 | MS.gene035652:intron | 50.0% | |
GTTTGTTTGCCTTTGCGCTG+GGG | + | chr8.1:3485369-3485388 | None:intergenic | 50.0% | |
TCCATCCTCTACGGTAACCT+CGG | + | chr8.1:3483400-3483419 | None:intergenic | 50.0% | |
TCCCAAAAGTTAGGGACGCT+TGG | + | chr8.1:3483123-3483142 | None:intergenic | 50.0% | |
TCCCACCACATGCTGCATAA+TGG | + | chr8.1:3484278-3484297 | None:intergenic | 50.0% | |
TGAGATTGGCAGAATCACGG+AGG | + | chr8.1:3483850-3483869 | None:intergenic | 50.0% | |
TGTGCAGTTGCTCTTGGACT+TGG | - | chr8.1:3483362-3483381 | MS.gene035652:intron | 50.0% | |
TTAGCCGAATGCACCGAGTA+TGG | + | chr8.1:3483083-3483102 | None:intergenic | 50.0% | |
TTGCCAACATGGTCATTGGG+AGG | - | chr8.1:3482861-3482880 | MS.gene035652:intron | 50.0% | |
! | CCACATGCTGCATAATGGAG+TGG | + | chr8.1:3484273-3484292 | None:intergenic | 50.0% |
! | CCTTGATGGTTGCTCGTTCA+TGG | - | chr8.1:3484809-3484828 | MS.gene035652:intron | 50.0% |
! | GCAATGTCTGGTGGTGAGAA+AGG | + | chr8.1:3486289-3486308 | None:intergenic | 50.0% |
! | TGGTGATGTTCAAGAGGCGA+AGG | - | chr8.1:3482151-3482170 | MS.gene035652:CDS | 50.0% |
!! | ATGGCCATACTCGGTGCATT+CGG | - | chr8.1:3483076-3483095 | MS.gene035652:intron | 50.0% |
ACAAGAACACATGGTCCCCC+AGG | - | chr8.1:3486876-3486895 | MS.gene035652:intron | 55.0% | |
AGCAGTCAGACTAGCACCCT+TGG | + | chr8.1:3484454-3484473 | None:intergenic | 55.0% | |
AGGCATCACTGCGCTGCATA+TGG | - | chr8.1:3483314-3483333 | MS.gene035652:intron | 55.0% | |
ATACCGGCACTGTAGCGTAG+CGG | - | chr8.1:3482621-3482640 | MS.gene035652:intron | 55.0% | |
ATTCCGCTACGCTACAGTGC+CGG | + | chr8.1:3482627-3482646 | None:intergenic | 55.0% | |
CAAGTCAACTAGCAGCCAGC+AGG | - | chr8.1:3485149-3485168 | MS.gene035652:CDS | 55.0% | |
CCAACATGGTCATTGGGAGG+TGG | - | chr8.1:3482864-3482883 | MS.gene035652:intron | 55.0% | |
CCACCTCCCAATGACCATGT+TGG | + | chr8.1:3482867-3482886 | None:intergenic | 55.0% | |
TCCGAGGTTACCGTAGAGGA+TGG | - | chr8.1:3483396-3483415 | MS.gene035652:intron | 55.0% | |
TGTGTCCGAGGTTACCGTAG+AGG | - | chr8.1:3483392-3483411 | MS.gene035652:intron | 55.0% | |
!! | CACAGCCTTGGTGTCTGAGT+GGG | - | chr8.1:3484036-3484055 | MS.gene035652:intron | 55.0% |
!! | CTACGCTACAGTGCCGGTAT+AGG | + | chr8.1:3482621-3482640 | None:intergenic | 55.0% |
!! | TGGAGGTACTGCCCTCCATT+TGG | - | chr8.1:3483044-3483063 | MS.gene035652:intron | 55.0% |
CTTGGGAGCTTCTGTGTCCG+AGG | - | chr8.1:3483380-3483399 | MS.gene035652:intron | 60.0% | |
GGAGGGCAGTACCTCCATTC+AGG | + | chr8.1:3483041-3483060 | None:intergenic | 60.0% | |
GTCAACTAGCAGCCAGCAGG+TGG | - | chr8.1:3485152-3485171 | MS.gene035652:CDS | 60.0% | |
TGCAGCTCATGGCCACCATG+AGG | - | chr8.1:3482247-3482266 | MS.gene035652:CDS | 60.0% | |
TGGAGAGATCCCCAGCGCAA+AGG | - | chr8.1:3485357-3485376 | MS.gene035652:intron | 60.0% | |
!! | GCACAGCCTTGGTGTCTGAG+TGG | - | chr8.1:3484035-3484054 | MS.gene035652:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 3482074 | 3487355 | 3482074 | ID=MS.gene035652 |
chr8.1 | mRNA | 3482074 | 3487355 | 3482074 | ID=MS.gene035652.t1;Parent=MS.gene035652 |
chr8.1 | exon | 3487161 | 3487355 | 3487161 | ID=MS.gene035652.t1.exon1;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3487161 | 3487355 | 3487161 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3487011 | 3487070 | 3487011 | ID=MS.gene035652.t1.exon2;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3487011 | 3487070 | 3487011 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3486514 | 3486585 | 3486514 | ID=MS.gene035652.t1.exon3;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3486514 | 3486585 | 3486514 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3486239 | 3486408 | 3486239 | ID=MS.gene035652.t1.exon4;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3486239 | 3486408 | 3486239 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3485991 | 3486151 | 3485991 | ID=MS.gene035652.t1.exon5;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3485991 | 3486151 | 3485991 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3485115 | 3485173 | 3485115 | ID=MS.gene035652.t1.exon6;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3485115 | 3485173 | 3485115 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3484942 | 3484988 | 3484942 | ID=MS.gene035652.t1.exon7;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3484942 | 3484988 | 3484942 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3484488 | 3484628 | 3484488 | ID=MS.gene035652.t1.exon8;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3484488 | 3484628 | 3484488 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3483615 | 3483706 | 3483615 | ID=MS.gene035652.t1.exon9;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3483615 | 3483706 | 3483615 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
chr8.1 | exon | 3482074 | 3482615 | 3482074 | ID=MS.gene035652.t1.exon10;Parent=MS.gene035652.t1 |
chr8.1 | CDS | 3482074 | 3482615 | 3482074 | ID=cds.MS.gene035652.t1;Parent=MS.gene035652.t1 |
Gene Sequence |
Protein sequence |