Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046071.t1 | XP_024631389.1 | 97.1 | 414 | 12 | 0 | 1 | 414 | 1 | 414 | 5.20E-225 | 790 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046071.t1 | Q9M0Y3 | 67.5 | 409 | 132 | 1 | 4 | 412 | 7 | 414 | 1.7e-155 | 550.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046071.t1 | A0A072V6W8 | 97.1 | 410 | 12 | 0 | 1 | 410 | 1 | 410 | 6.6e-222 | 779.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064214 | MS.gene046071 | PPI |
| MS.gene35750 | MS.gene046071 | PPI |
| MS.gene51416 | MS.gene046071 | PPI |
| MS.gene046071 | MS.gene45316 | PPI |
| MS.gene046074 | MS.gene046071 | PPI |
| MS.gene046071 | MS.gene064214 | PPI |
| MS.gene064217 | MS.gene046071 | PPI |
| MS.gene046071 | MS.gene51414 | PPI |
| MS.gene046071 | MS.gene31551 | PPI |
| MS.gene064218 | MS.gene046071 | PPI |
| MS.gene046071 | MS.gene029003 | PPI |
| MS.gene046071 | MS.gene043342 | PPI |
| MS.gene45318 | MS.gene046071 | PPI |
| MS.gene046071 | MS.gene064218 | PPI |
| MS.gene046071 | MS.gene45320 | PPI |
| MS.gene51411 | MS.gene046071 | PPI |
| MS.gene046071 | MS.gene046073 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046071.t1 | MTR_2g047968 | 97.073 | 410 | 12 | 0 | 1 | 410 | 1 | 410 | 0.0 | 806 |
| MS.gene046071.t1 | MTR_0008s0170 | 80.292 | 411 | 81 | 0 | 4 | 414 | 4 | 414 | 0.0 | 677 |
| MS.gene046071.t1 | MTR_0008s0130 | 76.829 | 410 | 95 | 0 | 5 | 414 | 5 | 414 | 0.0 | 650 |
| MS.gene046071.t1 | MTR_4g050990 | 77.295 | 414 | 94 | 0 | 1 | 414 | 1 | 414 | 0.0 | 644 |
| MS.gene046071.t1 | MTR_2g089520 | 77.295 | 414 | 94 | 0 | 1 | 414 | 1 | 414 | 0.0 | 644 |
| MS.gene046071.t1 | MTR_2g011600 | 69.608 | 408 | 122 | 1 | 7 | 412 | 14 | 421 | 0.0 | 578 |
| MS.gene046071.t1 | MTR_2g011580 | 68.158 | 380 | 120 | 1 | 34 | 412 | 1 | 380 | 0.0 | 521 |
| MS.gene046071.t1 | MTR_2g011600 | 67.391 | 368 | 118 | 1 | 47 | 412 | 3 | 370 | 6.94e-178 | 501 |
| MS.gene046071.t1 | MTR_1g071120 | 71.920 | 349 | 89 | 3 | 11 | 358 | 53 | 393 | 1.70e-177 | 501 |
| MS.gene046071.t1 | MTR_8g007285 | 58.242 | 364 | 148 | 2 | 52 | 412 | 2 | 364 | 2.02e-136 | 395 |
| MS.gene046071.t1 | MTR_0003s0470 | 33.494 | 415 | 236 | 12 | 11 | 410 | 26 | 415 | 9.48e-56 | 189 |
| MS.gene046071.t1 | MTR_3g462280 | 30.923 | 401 | 240 | 9 | 23 | 410 | 47 | 423 | 5.08e-46 | 164 |
| MS.gene046071.t1 | MTR_4g114710 | 29.167 | 432 | 240 | 15 | 4 | 410 | 8 | 398 | 2.46e-39 | 145 |
| MS.gene046071.t1 | MTR_2g011530 | 68.478 | 92 | 28 | 1 | 278 | 368 | 2 | 93 | 3.35e-36 | 128 |
| MS.gene046071.t1 | MTR_2g011540 | 49.630 | 135 | 61 | 1 | 52 | 179 | 2 | 136 | 4.65e-34 | 124 |
| MS.gene046071.t1 | MTR_2g011560 | 39.474 | 152 | 36 | 3 | 177 | 323 | 17 | 117 | 2.90e-17 | 77.8 |
| MS.gene046071.t1 | MTR_2g011570 | 66.667 | 45 | 15 | 0 | 137 | 181 | 1 | 45 | 4.71e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046071.t1 | AT4G05120 | 67.482 | 409 | 132 | 1 | 4 | 412 | 7 | 414 | 0.0 | 570 |
| MS.gene046071.t1 | AT4G05120 | 67.482 | 409 | 132 | 1 | 4 | 412 | 7 | 414 | 0.0 | 570 |
| MS.gene046071.t1 | AT4G05110 | 64.303 | 409 | 145 | 1 | 4 | 412 | 7 | 414 | 0.0 | 546 |
| MS.gene046071.t1 | AT4G05110 | 64.303 | 409 | 145 | 1 | 4 | 412 | 7 | 414 | 0.0 | 546 |
| MS.gene046071.t1 | AT4G05110 | 64.059 | 409 | 146 | 1 | 4 | 412 | 7 | 414 | 0.0 | 545 |
| MS.gene046071.t1 | AT4G05140 | 63.570 | 409 | 149 | 0 | 4 | 412 | 7 | 415 | 0.0 | 541 |
| MS.gene046071.t1 | AT4G05130 | 62.530 | 411 | 153 | 1 | 4 | 414 | 7 | 416 | 0.0 | 535 |
| MS.gene046071.t1 | AT3G09990 | 62.439 | 410 | 151 | 2 | 6 | 414 | 10 | 417 | 0.0 | 530 |
| MS.gene046071.t1 | AT1G61630 | 60.976 | 410 | 159 | 1 | 4 | 412 | 5 | 414 | 0.0 | 515 |
| MS.gene046071.t1 | AT1G70330 | 29.512 | 410 | 251 | 8 | 16 | 410 | 64 | 450 | 2.43e-50 | 176 |
| MS.gene046071.t1 | AT1G02630 | 29.187 | 418 | 254 | 10 | 1 | 410 | 6 | 389 | 1.15e-45 | 162 |
| MS.gene046071.t1 | AT1G02630 | 28.169 | 213 | 150 | 3 | 1 | 212 | 6 | 216 | 2.11e-23 | 100 |
Find 98 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCAATCTTGTACTGATTT+TGG | 0.139874 | 4.4:-56970134 | None:intergenic |
| GTACTTCACGATTGGTAATT+TGG | 0.154465 | 4.4:-56970901 | None:intergenic |
| GTATATCAGCCATTTATATT+TGG | 0.187219 | 4.4:+56970082 | MS.gene046071:CDS |
| ATATTCTTGACATCATTCTT+AGG | 0.193217 | 4.4:+56971537 | MS.gene046071:CDS |
| TGCATAGTTAGTGGTGTATT+TGG | 0.235166 | 4.4:+56970347 | MS.gene046071:CDS |
| CTTCTTGGAGGTCTATTTGC+AGG | 0.236906 | 4.4:+56971744 | MS.gene046071:CDS |
| CCACCATTCCGCCTTGTATA+TGG | 0.254233 | 4.4:-56970382 | None:intergenic |
| ATTTGGAACACAAGCAATAT+TGG | 0.269430 | 4.4:+56970099 | MS.gene046071:CDS |
| TTTGCTGGTTTCTTGGCATT+GGG | 0.292449 | 4.4:+56968201 | MS.gene046071:CDS |
| GCTTGTGTTCCAAATATAAA+TGG | 0.295680 | 4.4:-56970091 | None:intergenic |
| CATGCTTCCGGAATTCATTC+AGG | 0.308853 | 4.4:+56970418 | MS.gene046071:CDS |
| ATGGTGATTTGCTGGTTTCT+TGG | 0.309601 | 4.4:+56968194 | MS.gene046071:CDS |
| ATTTGCTGGTTTCTTGGCAT+TGG | 0.318253 | 4.4:+56968200 | MS.gene046071:CDS |
| TGCAGAAATACCATCCTTCT+AGG | 0.326458 | 4.4:+56970047 | MS.gene046071:intron |
| ATGTTAATGTTGTGTCTTCT+TGG | 0.334137 | 4.4:+56971729 | MS.gene046071:CDS |
| TACTTCACGATTGGTAATTT+GGG | 0.335339 | 4.4:-56970900 | None:intergenic |
| TTGTTGCAGTCGTTCCTTGC+TGG | 0.335887 | 4.4:+56970515 | MS.gene046071:intron |
| AAGATCAGCTGTAACAGTTT+TGG | 0.342976 | 4.4:-56970952 | None:intergenic |
| TTACTATATTTACTTGTTCC+CGG | 0.355375 | 4.4:+56968262 | MS.gene046071:CDS |
| ACAATGTTAGCACATATATT+AGG | 0.355997 | 4.4:-56971193 | None:intergenic |
| CTTGACTGGCTATGGTTAAT+CGG | 0.374014 | 4.4:+56971774 | MS.gene046071:CDS |
| GGGACCTGAACAAAATGCTT+TGG | 0.395332 | 4.4:+56971701 | MS.gene046071:intron |
| AGACCTGTCTTACATGCTTC+CGG | 0.398247 | 4.4:+56970406 | MS.gene046071:CDS |
| CTTGCTGGTTCTGCAGCGTC+TGG | 0.403809 | 4.4:+56970530 | MS.gene046071:CDS |
| ATGCTGCAATGGTGATTTGC+TGG | 0.406667 | 4.4:+56968186 | MS.gene046071:CDS |
| AGACCCACCTTGTAACCTTT+AGG | 0.407785 | 4.4:-56971603 | None:intergenic |
| CGAAGTATGGTAAGCAGGGC+TGG | 0.417664 | 4.4:+56971511 | MS.gene046071:CDS |
| TCACCACAGCAGTAATTTCT+CGG | 0.420593 | 4.4:+56971457 | MS.gene046071:CDS |
| ATTGGTATATGCATAGTTAG+TGG | 0.422297 | 4.4:+56970338 | MS.gene046071:CDS |
| CACCATTCCGCCTTGTATAT+GGG | 0.424233 | 4.4:-56970381 | None:intergenic |
| TATTCTTGACATCATTCTTA+GGG | 0.429143 | 4.4:+56971538 | MS.gene046071:CDS |
| GTACTATGCCAGGTGAGGTC+TGG | 0.433470 | 4.4:-56970989 | None:intergenic |
| CATGGAAGATTCAAAACAAC+AGG | 0.436749 | 4.4:+56971112 | MS.gene046071:CDS |
| GGACCTGAACAAAATGCTTT+GGG | 0.440234 | 4.4:+56971702 | MS.gene046071:CDS |
| ACAGCTGATCTTGCTGCAGC+TGG | 0.441389 | 4.4:+56970963 | MS.gene046071:CDS |
| TTCTTGGAGGTCTATTTGCA+GGG | 0.442770 | 4.4:+56971745 | MS.gene046071:CDS |
| GATACTGGATCACACAGTTT+AGG | 0.443470 | 4.4:+56971242 | MS.gene046071:CDS |
| GGCTTCTTATCAGAAGATAC+TGG | 0.444567 | 4.4:+56971227 | MS.gene046071:CDS |
| CACTGCGAAGTATGGTAAGC+AGG | 0.446546 | 4.4:+56971506 | MS.gene046071:CDS |
| TAGTTGGATTTAGCAACATC+TGG | 0.449427 | 4.4:+56970293 | MS.gene046071:intron |
| ATGCTGACCTGAATGAATTC+CGG | 0.460793 | 4.4:-56970425 | None:intergenic |
| ACAATGGTAAGCACCCTAGA+AGG | 0.465663 | 4.4:-56970061 | None:intergenic |
| GTATCTTCTGATAAGAAGCC+GGG | 0.471084 | 4.4:-56971224 | None:intergenic |
| TTAATGTTGTGTCTTCTTGG+AGG | 0.472371 | 4.4:+56971732 | MS.gene046071:CDS |
| GCTGGCATCCAGACCTCACC+TGG | 0.481003 | 4.4:+56970981 | MS.gene046071:CDS |
| ACAAGATTGCGGAACCTGTT+CGG | 0.481586 | 4.4:+56970145 | MS.gene046071:CDS |
| ACATCTGGTAAAGGAGGGAT+TGG | 0.484610 | 4.4:+56970308 | MS.gene046071:CDS |
| ACTCGTGAAAATCTTGAAGA+TGG | 0.489152 | 4.4:+56971419 | MS.gene046071:CDS |
| AAACGACAGTGTATCCGAAC+AGG | 0.499026 | 4.4:-56970159 | None:intergenic |
| TGCTGGTTTCTTGGCATTGG+GGG | 0.514420 | 4.4:+56968203 | MS.gene046071:CDS |
| GCCGTGTTTGAGAATTCTCC+TGG | 0.515360 | 4.4:+56970587 | MS.gene046071:CDS |
| TGGCTATGGTTAATCGGTAA+AGG | 0.516085 | 4.4:+56971780 | MS.gene046071:CDS |
| TTGCAGGGGTAACACTTGAC+TGG | 0.516302 | 4.4:+56971760 | MS.gene046071:CDS |
| GAACGGTAGTACTTCACGAT+TGG | 0.520220 | 4.4:-56970909 | None:intergenic |
| TTGCTGGTTTCTTGGCATTG+GGG | 0.520379 | 4.4:+56968202 | MS.gene046071:CDS |
| CTTCGGAGGCTGCTTTCGAA+CGG | 0.527518 | 4.4:-56970926 | None:intergenic |
| TTCTGCACCTAAAGGTTACA+AGG | 0.528109 | 4.4:+56971596 | MS.gene046071:CDS |
| GATTTAGCAACATCTGGTAA+AGG | 0.531613 | 4.4:+56970299 | MS.gene046071:CDS |
| CATATACAAGGCGGAATGGT+GGG | 0.535308 | 4.4:+56970383 | MS.gene046071:CDS |
| GGGTAACACTTGACTGGCTA+TGG | 0.535952 | 4.4:+56971766 | MS.gene046071:CDS |
| CGTTCGAAAGCAGCCTCCGA+AGG | 0.538878 | 4.4:+56970927 | MS.gene046071:CDS |
| AGTATCTTCTGATAAGAAGC+CGG | 0.542203 | 4.4:-56971225 | None:intergenic |
| GCTCCTTTGCGAAGACCACC+AGG | 0.551931 | 4.4:-56970605 | None:intergenic |
| AAAAGAAACAGTACTATGCC+AGG | 0.552448 | 4.4:-56970999 | None:intergenic |
| ACAGATAGTGAGGTAACCAT+TGG | 0.553661 | 4.4:-56971565 | None:intergenic |
| AGCAATATTGGCTTACAATG+AGG | 0.563692 | 4.4:+56970111 | MS.gene046071:CDS |
| ATAGCTGATGCCCATATACA+AGG | 0.577441 | 4.4:+56970371 | MS.gene046071:CDS |
| ATTCCGGAAGCATGTAAGAC+AGG | 0.580637 | 4.4:-56970409 | None:intergenic |
| TTAGCAACATCTGGTAAAGG+AGG | 0.580672 | 4.4:+56970302 | MS.gene046071:CDS |
| TGAGACTCCACCACGTCTTG+AGG | 0.583689 | 4.4:+56968090 | MS.gene046071:CDS |
| TGCCCATATACAAGGCGGAA+TGG | 0.587617 | 4.4:+56970379 | MS.gene046071:CDS |
| TCATTCTTAGGGTTATCCAA+TGG | 0.594998 | 4.4:+56971549 | MS.gene046071:CDS |
| GCAGAAATACCATCCTTCTA+GGG | 0.600947 | 4.4:+56970048 | MS.gene046071:intron |
| CCATATACAAGGCGGAATGG+TGG | 0.604392 | 4.4:+56970382 | MS.gene046071:CDS |
| TCTTGGAGGTCTATTTGCAG+GGG | 0.607411 | 4.4:+56971746 | MS.gene046071:CDS |
| AAACCGAGAAATTACTGCTG+TGG | 0.608814 | 4.4:-56971460 | None:intergenic |
| TCTCCTGGTGGTCTTCGCAA+AGG | 0.610206 | 4.4:+56970602 | MS.gene046071:CDS |
| TAGCAACATCTGGTAAAGGA+GGG | 0.612233 | 4.4:+56970303 | MS.gene046071:CDS |
| TATAAATGGCTGATATACAA+TGG | 0.614615 | 4.4:-56970077 | None:intergenic |
| ACTGCGAAGTATGGTAAGCA+GGG | 0.623428 | 4.4:+56971507 | MS.gene046071:CDS |
| TATGGTTAATCGGTAAAGGA+TGG | 0.624498 | 4.4:+56971784 | MS.gene046071:CDS |
| GCAGGGCAAATATGCTGCAA+TGG | 0.624648 | 4.4:+56968175 | MS.gene046071:intron |
| AAGTGAAAACACAGATAGTG+AGG | 0.626913 | 4.4:-56971575 | None:intergenic |
| GATCACACAGTTTAGGCACC+TGG | 0.628459 | 4.4:+56971249 | MS.gene046071:CDS |
| TGGTAAGCACCCTAGAAGGA+TGG | 0.634640 | 4.4:-56970057 | None:intergenic |
| CAGACGCTGCAGAACCAGCA+AGG | 0.638516 | 4.4:-56970529 | None:intergenic |
| TCAAAACAACAGGATCGCAA+AGG | 0.642728 | 4.4:+56971122 | MS.gene046071:CDS |
| CCAAAATCAGTACAAGATTG+CGG | 0.645703 | 4.4:+56970134 | MS.gene046071:CDS |
| TTCGCAGTGAAATAAAACGC+TGG | 0.653094 | 4.4:-56971492 | None:intergenic |
| AAACAGTACTATGCCAGGTG+AGG | 0.658783 | 4.4:-56970994 | None:intergenic |
| ACCAGGAGAATTCTCAAACA+CGG | 0.660617 | 4.4:-56970588 | None:intergenic |
| TATATTACCTCAAGACGTGG+TGG | 0.674673 | 4.4:-56968097 | None:intergenic |
| TATCTTCTGATAAGAAGCCG+GGG | 0.689994 | 4.4:-56971223 | None:intergenic |
| GTGTTTGAGAATTCTCCTGG+TGG | 0.694597 | 4.4:+56970590 | MS.gene046071:CDS |
| TGGAGTCTCACTGATGACCA+TGG | 0.695742 | 4.4:-56968077 | None:intergenic |
| TTATATATTACCTCAAGACG+TGG | 0.729092 | 4.4:-56968100 | None:intergenic |
| AAGATCAAACACATTAAACG+TGG | 0.738203 | 4.4:-56971379 | None:intergenic |
| GCTGATGCCCATATACAAGG+CGG | 0.752747 | 4.4:+56970374 | MS.gene046071:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAAAACTTTTATTCAA+AGG | - | chr4.4:56970013-56970032 | None:intergenic | 10.0% |
| !! | ATTGTAAAATCTTAAGATTT+GGG | - | chr4.4:56969265-56969284 | None:intergenic | 15.0% |
| !! | GATATCAAATTTAACAATAA+AGG | + | chr4.4:56969791-56969810 | MS.gene046071:intron | 15.0% |
| !! | TATTGTAAAATCTTAAGATT+TGG | - | chr4.4:56969266-56969285 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAGGAAAAATGT+AGG | + | chr4.4:56969677-56969696 | MS.gene046071:intron | 15.0% |
| !!! | TAATTTTAAGGAAAAATGTA+GGG | + | chr4.4:56969678-56969697 | MS.gene046071:intron | 15.0% |
| !! | AAAATTATTGAGTTTGTCAA+TGG | - | chr4.4:56969665-56969684 | None:intergenic | 20.0% |
| !! | TAAGTTTAACTCTTCAATAA+TGG | + | chr4.4:56970631-56970650 | MS.gene046071:intron | 20.0% |
| !! | TCAACATATACATTTGATAA+TGG | + | chr4.4:56970487-56970506 | MS.gene046071:intron | 20.0% |
| !! | TGAGAAAATAGATAAATTAC+CGG | - | chr4.4:56968284-56968303 | None:intergenic | 20.0% |
| !!! | ATAAATAAGAGTGTTTTATG+TGG | + | chr4.4:56968672-56968691 | MS.gene046071:intron | 20.0% |
| !!! | GTATGTTTTTTTATTTTGCA+GGG | + | chr4.4:56971681-56971700 | MS.gene046071:intron | 20.0% |
| !!! | TAAGCCAATTATTTGAATTT+TGG | - | chr4.4:56969312-56969331 | None:intergenic | 20.0% |
| !!! | TCAAATTTTGATTTTTGTTG+AGG | + | chr4.4:56968407-56968426 | MS.gene046071:intron | 20.0% |
| !!! | TGACAAACTCAATAATTTTA+AGG | + | chr4.4:56969666-56969685 | MS.gene046071:intron | 20.0% |
| !!! | TGTATGTTTTTTTATTTTGC+AGG | + | chr4.4:56971680-56971699 | MS.gene046071:intron | 20.0% |
| ! | AAACATACATGCAATATTTG+TGG | + | chr4.4:56968131-56968150 | MS.gene046071:intron | 25.0% |
| ! | AACATAAATGCATATTCTAG+AGG | - | chr4.4:56970245-56970264 | None:intergenic | 25.0% |
| ! | AAGCACTTAAAATTGAACTA+AGG | - | chr4.4:56969759-56969778 | None:intergenic | 25.0% |
| ! | AAGCTCAAAAAAAGATGATA+TGG | - | chr4.4:56970850-56970869 | None:intergenic | 25.0% |
| ! | ACAATGTTAGCACATATATT+AGG | - | chr4.4:56971196-56971215 | None:intergenic | 25.0% |
| ! | ATAATGACAAATAATCACTG+TGG | - | chr4.4:56970783-56970802 | None:intergenic | 25.0% |
| ! | ATATACACAATGTAGAACAA+AGG | - | chr4.4:56971298-56971317 | None:intergenic | 25.0% |
| ! | ATATTCTTGACATCATTCTT+AGG | + | chr4.4:56971537-56971556 | MS.gene046071:CDS | 25.0% |
| ! | ATGTTATCAAAATAGCAATC+TGG | - | chr4.4:56969716-56969735 | None:intergenic | 25.0% |
| ! | ATTTGTGGATTTCAATTCTT+TGG | + | chr4.4:56968146-56968165 | MS.gene046071:intron | 25.0% |
| ! | CAATTGTAATTACTACTATG+AGG | + | chr4.4:56970450-56970469 | MS.gene046071:intron | 25.0% |
| ! | CTGACCAAAATTCAAATAAT+TGG | + | chr4.4:56969305-56969324 | MS.gene046071:intron | 25.0% |
| ! | GAGAAAATAGATAAATTACC+GGG | - | chr4.4:56968283-56968302 | None:intergenic | 25.0% |
| ! | GTATATCAGCCATTTATATT+TGG | + | chr4.4:56970082-56970101 | MS.gene046071:CDS | 25.0% |
| ! | TAATCTGAATCGTAACAATT+AGG | - | chr4.4:56971062-56971081 | None:intergenic | 25.0% |
| ! | TAATGACAAATAATCACTGT+GGG | - | chr4.4:56970782-56970801 | None:intergenic | 25.0% |
| ! | TATAAATGGCTGATATACAA+TGG | - | chr4.4:56970080-56970099 | None:intergenic | 25.0% |
| ! | TATTCTTGACATCATTCTTA+GGG | + | chr4.4:56971538-56971557 | MS.gene046071:CDS | 25.0% |
| ! | TATTGAAGAGTTAAACTTAC+TGG | - | chr4.4:56970630-56970649 | None:intergenic | 25.0% |
| ! | TGTATACGCTATATAGTTTA+AGG | - | chr4.4:56970738-56970757 | None:intergenic | 25.0% |
| ! | TGTTATCAAAATAGCAATCT+GGG | - | chr4.4:56969715-56969734 | None:intergenic | 25.0% |
| ! | TTACTATATTTACTTGTTCC+CGG | + | chr4.4:56968262-56968281 | MS.gene046071:CDS | 25.0% |
| ! | TTGATATTTCCATTTGTTTC+AGG | + | chr4.4:56971337-56971356 | MS.gene046071:intron | 25.0% |
| !! | TAATTTCCTGAATTTGAGAT+GGG | + | chr4.4:56968360-56968379 | MS.gene046071:intron | 25.0% |
| !! | TTACAAAACTGGCTTATAAA+TGG | - | chr4.4:56969361-56969380 | None:intergenic | 25.0% |
| !!! | GATTTCAATTCTTTGGAATT+TGG | + | chr4.4:56968153-56968172 | MS.gene046071:intron | 25.0% |
| !!! | TAAGGAGCATAAACTTTTAA+GGG | + | chr4.4:56971628-56971647 | MS.gene046071:intron | 25.0% |
| !!! | TTAAGGAGCATAAACTTTTA+AGG | + | chr4.4:56971627-56971646 | MS.gene046071:intron | 25.0% |
| AAAATCTTAAGATTTGGGCT+GGG | - | chr4.4:56969260-56969279 | None:intergenic | 30.0% | |
| AAAATGAATATGAACCTACC+AGG | - | chr4.4:56971270-56971289 | None:intergenic | 30.0% | |
| AAATTCTAACAGTTCCATGT+TGG | + | chr4.4:56968762-56968781 | MS.gene046071:intron | 30.0% | |
| AAGATCAAACACATTAAACG+TGG | - | chr4.4:56971382-56971401 | None:intergenic | 30.0% | |
| AAGTACACAAACAAATGAAC+AGG | - | chr4.4:56970217-56970236 | None:intergenic | 30.0% | |
| AATGTTCTGTTCAGAAAGTT+TGG | - | chr4.4:56969874-56969893 | None:intergenic | 30.0% | |
| AGTGCTTAAATCCTAACAAT+TGG | + | chr4.4:56968460-56968479 | MS.gene046071:intron | 30.0% | |
| ATATGTGATGATTTAAGAGC+TGG | + | chr4.4:56971314-56971333 | MS.gene046071:intron | 30.0% | |
| ATGTCCATGAGAAATTGAAA+AGG | - | chr4.4:56971038-56971057 | None:intergenic | 30.0% | |
| ATGTTAATGTTGTGTCTTCT+TGG | + | chr4.4:56971729-56971748 | MS.gene046071:CDS | 30.0% | |
| ATTACTACTATGAGGTTCAA+AGG | + | chr4.4:56970458-56970477 | MS.gene046071:intron | 30.0% | |
| ATTGGTATATGCATAGTTAG+TGG | + | chr4.4:56970338-56970357 | MS.gene046071:CDS | 30.0% | |
| ATTGTTACGATTCAGATTAC+AGG | + | chr4.4:56971063-56971082 | MS.gene046071:intron | 30.0% | |
| ATTTGATAGAAACACGAAAG+TGG | - | chr4.4:56968393-56968412 | None:intergenic | 30.0% | |
| GATAAACTTATCCAAGGTAA+AGG | - | chr4.4:56969116-56969135 | None:intergenic | 30.0% | |
| GCTTGTGTTCCAAATATAAA+TGG | - | chr4.4:56970094-56970113 | None:intergenic | 30.0% | |
| GTAATTTCCTGAATTTGAGA+TGG | + | chr4.4:56968359-56968378 | MS.gene046071:intron | 30.0% | |
| TAAAATCTTAAGATTTGGGC+TGG | - | chr4.4:56969261-56969280 | None:intergenic | 30.0% | |
| TATGTGGTATTTAAACCATG+AGG | + | chr4.4:56968688-56968707 | MS.gene046071:intron | 30.0% | |
| TGTCCATGAGAAATTGAAAA+GGG | - | chr4.4:56971037-56971056 | None:intergenic | 30.0% | |
| TTATATATTACCTCAAGACG+TGG | - | chr4.4:56968103-56968122 | None:intergenic | 30.0% | |
| TTATTCAAATCATACGCATC+TGG | + | chr4.4:56969948-56969967 | MS.gene046071:intron | 30.0% | |
| TTTAGTTGAAACCTTAGTCA+AGG | + | chr4.4:56968311-56968330 | MS.gene046071:intron | 30.0% | |
| ! | AAAATAGCAATCTGGGATAT+TGG | - | chr4.4:56969708-56969727 | None:intergenic | 30.0% |
| ! | ACACTCTTATTTATTCGATG+TGG | - | chr4.4:56968666-56968685 | None:intergenic | 30.0% |
| ! | ATTTGGAACACAAGCAATAT+TGG | + | chr4.4:56970099-56970118 | MS.gene046071:CDS | 30.0% |
| ! | CACTCTTATTTATTCGATGT+GGG | - | chr4.4:56968665-56968684 | None:intergenic | 30.0% |
| ! | GATGAGTTTTACCTAAAAAC+GGG | + | chr4.4:56968784-56968803 | MS.gene046071:intron | 30.0% |
| ! | GGATGAGTTTTACCTAAAAA+CGG | + | chr4.4:56968783-56968802 | MS.gene046071:intron | 30.0% |
| ! | TACTTCACGATTGGTAATTT+GGG | - | chr4.4:56970903-56970922 | None:intergenic | 30.0% |
| !! | AAGGAGCATAAACTTTTAAG+GGG | + | chr4.4:56971629-56971648 | MS.gene046071:intron | 30.0% |
| !! | CAATAAAAGCACCAATTGTT+AGG | - | chr4.4:56968474-56968493 | None:intergenic | 30.0% |
| !! | TCAGTTTTGTAAGTTGAGTT+GGG | + | chr4.4:56969234-56969253 | MS.gene046071:intron | 30.0% |
| !! | TTTTATTTCACTGCGAAGTA+TGG | + | chr4.4:56971498-56971517 | MS.gene046071:CDS | 30.0% |
| AAAAGAAACAGTACTATGCC+AGG | - | chr4.4:56971002-56971021 | None:intergenic | 35.0% | |
| AACACCTTAATCCAGACTAT+AGG | - | chr4.4:56968521-56968540 | None:intergenic | 35.0% | |
| AAGGTAAGAGATGTCAGATT+TGG | - | chr4.4:56969097-56969116 | None:intergenic | 35.0% | |
| AAGTGAAAACACAGATAGTG+AGG | - | chr4.4:56971578-56971597 | None:intergenic | 35.0% | |
| ACTCGTGAAAATCTTGAAGA+TGG | + | chr4.4:56971419-56971438 | MS.gene046071:CDS | 35.0% | |
| AGGTAAGAGATGTCAGATTT+GGG | - | chr4.4:56969096-56969115 | None:intergenic | 35.0% | |
| AGTATCTTCTGATAAGAAGC+CGG | - | chr4.4:56971228-56971247 | None:intergenic | 35.0% | |
| CATGGAAGATTCAAAACAAC+AGG | + | chr4.4:56971112-56971131 | MS.gene046071:CDS | 35.0% | |
| CCAAAATCAGTACAAGATTG+CGG | + | chr4.4:56970134-56970153 | MS.gene046071:CDS | 35.0% | |
| CCAACAGATAAACTTATCCA+AGG | - | chr4.4:56969122-56969141 | None:intergenic | 35.0% | |
| CCTTGGATAAGTTTATCTGT+TGG | + | chr4.4:56969119-56969138 | MS.gene046071:intron | 35.0% | |
| GAGAAATTGAAAAGGGACAA+AGG | - | chr4.4:56971030-56971049 | None:intergenic | 35.0% | |
| GATAAACTCATCCAAGGTAA+AGG | - | chr4.4:56968835-56968854 | None:intergenic | 35.0% | |
| GATGTTGCTAAATCCAACTA+TGG | - | chr4.4:56970293-56970312 | None:intergenic | 35.0% | |
| GATTTAGCAACATCTGGTAA+AGG | + | chr4.4:56970299-56970318 | MS.gene046071:CDS | 35.0% | |
| GTTACCTATAGTCTGGATTA+AGG | + | chr4.4:56968514-56968533 | MS.gene046071:intron | 35.0% | |
| TAACTAATGTGCTTCTTTCC+AGG | + | chr4.4:56971088-56971107 | MS.gene046071:intron | 35.0% | |
| TAGGTAAAACTCATCCAACA+TGG | - | chr4.4:56968779-56968798 | None:intergenic | 35.0% | |
| TAGTTGGATTTAGCAACATC+TGG | + | chr4.4:56970293-56970312 | MS.gene046071:intron | 35.0% | |
| TATGGTTAATCGGTAAAGGA+TGG | + | chr4.4:56971784-56971803 | MS.gene046071:CDS | 35.0% | |
| TCATTCTTAGGGTTATCCAA+TGG | + | chr4.4:56971549-56971568 | MS.gene046071:CDS | 35.0% | |
| TCCAACTATGGCAAGTAAAT+AGG | - | chr4.4:56970281-56970300 | None:intergenic | 35.0% | |
| TCCTATTTACTTGCCATAGT+TGG | + | chr4.4:56970277-56970296 | MS.gene046071:intron | 35.0% | |
| TGCATAGTTAGTGGTGTATT+TGG | + | chr4.4:56970347-56970366 | MS.gene046071:CDS | 35.0% | |
| TGTTAGAATTTAAGCCCATG+TGG | - | chr4.4:56968753-56968772 | None:intergenic | 35.0% | |
| TTAATGTTGTGTCTTCTTGG+AGG | + | chr4.4:56971732-56971751 | MS.gene046071:CDS | 35.0% | |
| TTCACCCACCTAACATTATT+CGG | - | chr4.4:56968547-56968566 | None:intergenic | 35.0% | |
| ! | AAGAGCATACCTGAAACAAA+TGG | - | chr4.4:56971349-56971368 | None:intergenic | 35.0% |
| ! | AAGATCAGCTGTAACAGTTT+TGG | - | chr4.4:56970955-56970974 | None:intergenic | 35.0% |
| ! | ATCTTCAAGATTTTCACGAG+TGG | - | chr4.4:56971420-56971439 | None:intergenic | 35.0% |
| ! | CTAACATTGTCTATTTTCCC+CGG | + | chr4.4:56971206-56971225 | MS.gene046071:CDS | 35.0% |
| ! | GTACTTCACGATTGGTAATT+TGG | - | chr4.4:56970904-56970923 | None:intergenic | 35.0% |
| ! | TACCTAAAAACGGGTTTACA+TGG | + | chr4.4:56968793-56968812 | MS.gene046071:intron | 35.0% |
| ! | TATTTCTGCACAAGGAAGAA+AGG | - | chr4.4:56970037-56970056 | None:intergenic | 35.0% |
| ! | TGTCCCTTTTCAATTTCTCA+TGG | + | chr4.4:56971031-56971050 | MS.gene046071:intron | 35.0% |
| ! | TTAAAGGGCGTGAAAATGTT+AGG | + | chr4.4:56968636-56968655 | MS.gene046071:intron | 35.0% |
| !! | AGCAATATTGGCTTACAATG+AGG | + | chr4.4:56970111-56970130 | MS.gene046071:CDS | 35.0% |
| !! | CAATTCTTTGGAATTTGGCA+GGG | + | chr4.4:56968158-56968177 | MS.gene046071:intron | 35.0% |
| !! | CCAGTTTTGTAAGTTGAGTT+GGG | + | chr4.4:56969065-56969084 | MS.gene046071:intron | 35.0% |
| !! | GTCAGTTTTGTAAGTTGAGT+TGG | + | chr4.4:56969233-56969252 | MS.gene046071:intron | 35.0% |
| !! | TCAATTCTTTGGAATTTGGC+AGG | + | chr4.4:56968157-56968176 | MS.gene046071:intron | 35.0% |
| !! | TTGGTGCTTTTATTGAGAGT+TGG | + | chr4.4:56968479-56968498 | MS.gene046071:intron | 35.0% |
| !! | TTTCCCAAAGCATTTTGTTC+AGG | - | chr4.4:56971708-56971727 | None:intergenic | 35.0% |
| !!! | ACCTAATGGACTAGTCTTTT+GGG | + | chr4.4:56968718-56968737 | MS.gene046071:intron | 35.0% |
| !!! | TGTAACAGTTTTGGATCCTT+CGG | - | chr4.4:56970946-56970965 | None:intergenic | 35.0% |
| AAACCGAGAAATTACTGCTG+TGG | - | chr4.4:56971463-56971482 | None:intergenic | 40.0% | |
| AAGGACAACAGACACGAAAT+GGG | - | chr4.4:56970719-56970738 | None:intergenic | 40.0% | |
| ACAGATAGTGAGGTAACCAT+TGG | - | chr4.4:56971568-56971587 | None:intergenic | 40.0% | |
| ACCAGGAGAATTCTCAAACA+CGG | - | chr4.4:56970591-56970610 | None:intergenic | 40.0% | |
| AGTCGATGTGGAACTATAAC+AGG | - | chr4.4:56968433-56968452 | None:intergenic | 40.0% | |
| ATAGCTGATGCCCATATACA+AGG | + | chr4.4:56970371-56970390 | MS.gene046071:CDS | 40.0% | |
| ATGCTGACCTGAATGAATTC+CGG | - | chr4.4:56970428-56970447 | None:intergenic | 40.0% | |
| CACATCGCTAGTGACAATAT+CGG | - | chr4.4:56969978-56969997 | None:intergenic | 40.0% | |
| CCAACAGATAAACTCATCCA+AGG | - | chr4.4:56968841-56968860 | None:intergenic | 40.0% | |
| CCAAGGTAAAGGTAAGAAAC+TGG | - | chr4.4:56968936-56968955 | None:intergenic | 40.0% | |
| CCAGTTTCTTACCTTTACCT+TGG | + | chr4.4:56968933-56968952 | MS.gene046071:intron | 40.0% | |
| CCCAACTCAACTTACAAAAC+TGG | - | chr4.4:56969068-56969087 | None:intergenic | 40.0% | |
| CCTTGGATGAGTTTATCTGT+TGG | + | chr4.4:56968838-56968857 | MS.gene046071:intron | 40.0% | |
| GACATCTCTTACCTTTACCT+TGG | + | chr4.4:56968821-56968840 | MS.gene046071:intron | 40.0% | |
| GATACTGGATCACACAGTTT+AGG | + | chr4.4:56971242-56971261 | MS.gene046071:CDS | 40.0% | |
| GCAGAAATACCATCCTTCTA+GGG | + | chr4.4:56970048-56970067 | MS.gene046071:intron | 40.0% | |
| GGACCTGAACAAAATGCTTT+GGG | + | chr4.4:56971702-56971721 | MS.gene046071:CDS | 40.0% | |
| GGCTTCTTATCAGAAGATAC+TGG | + | chr4.4:56971227-56971246 | MS.gene046071:CDS | 40.0% | |
| GTATCTTCTGATAAGAAGCC+GGG | - | chr4.4:56971227-56971246 | None:intergenic | 40.0% | |
| GTGTTCCACCGAATAATGTT+AGG | + | chr4.4:56968536-56968555 | MS.gene046071:intron | 40.0% | |
| TAAGGACAACAGACACGAAA+TGG | - | chr4.4:56970720-56970739 | None:intergenic | 40.0% | |
| TAGCAACATCTGGTAAAGGA+GGG | + | chr4.4:56970303-56970322 | MS.gene046071:CDS | 40.0% | |
| TATATTACCTCAAGACGTGG+TGG | - | chr4.4:56968100-56968119 | None:intergenic | 40.0% | |
| TATCTTCTGATAAGAAGCCG+GGG | - | chr4.4:56971226-56971245 | None:intergenic | 40.0% | |
| TCAAAACAACAGGATCGCAA+AGG | + | chr4.4:56971122-56971141 | MS.gene046071:CDS | 40.0% | |
| TCACCACAGCAGTAATTTCT+CGG | + | chr4.4:56971457-56971476 | MS.gene046071:CDS | 40.0% | |
| TCATGGACGCAACTCTTAAA+GGG | + | chr4.4:56968621-56968640 | MS.gene046071:intron | 40.0% | |
| TCCACCGAATAATGTTAGGT+GGG | + | chr4.4:56968540-56968559 | MS.gene046071:intron | 40.0% | |
| TGCAGAAATACCATCCTTCT+AGG | + | chr4.4:56970047-56970066 | MS.gene046071:intron | 40.0% | |
| TGGCTATGGTTAATCGGTAA+AGG | + | chr4.4:56971780-56971799 | MS.gene046071:CDS | 40.0% | |
| TTAGCAACATCTGGTAAAGG+AGG | + | chr4.4:56970302-56970321 | MS.gene046071:CDS | 40.0% | |
| TTCCACCGAATAATGTTAGG+TGG | + | chr4.4:56968539-56968558 | MS.gene046071:intron | 40.0% | |
| TTCGCAGTGAAATAAAACGC+TGG | - | chr4.4:56971495-56971514 | None:intergenic | 40.0% | |
| TTCTGCACCTAAAGGTTACA+AGG | + | chr4.4:56971596-56971615 | MS.gene046071:CDS | 40.0% | |
| TTCTTGGAGGTCTATTTGCA+GGG | + | chr4.4:56971745-56971764 | MS.gene046071:CDS | 40.0% | |
| TTTAAGAGTTGCGTCCATGA+CGG | - | chr4.4:56968621-56968640 | None:intergenic | 40.0% | |
| ! | AAGGATGGTATTTCTGCACA+AGG | - | chr4.4:56970045-56970064 | None:intergenic | 40.0% |
| ! | ACCCAAAAGACTAGTCCATT+AGG | - | chr4.4:56968722-56968741 | None:intergenic | 40.0% |
| ! | CAAAAGACTAGTCCATTAGG+TGG | - | chr4.4:56968719-56968738 | None:intergenic | 40.0% |
| ! | CATGACGGTTTTCACTCTAT+CGG | - | chr4.4:56968606-56968625 | None:intergenic | 40.0% |
| ! | CTAAAAACGGGTTTACATGG+TGG | + | chr4.4:56968796-56968815 | MS.gene046071:intron | 40.0% |
| ! | CTTGACTGGCTATGGTTAAT+CGG | + | chr4.4:56971774-56971793 | MS.gene046071:CDS | 40.0% |
| ! | GCACTCTTATTTAGTCGATG+TGG | - | chr4.4:56968445-56968464 | None:intergenic | 40.0% |
| ! | GGAGGGATTGGAACTTTTAT+TGG | + | chr4.4:56970320-56970339 | MS.gene046071:CDS | 40.0% |
| ! | GTTTTCACTTCTGCACCTAA+AGG | + | chr4.4:56971588-56971607 | MS.gene046071:CDS | 40.0% |
| ! | TGGACCAACAGATTTTGTGA+GGG | - | chr4.4:56968977-56968996 | None:intergenic | 40.0% |
| !! | ATGGTGATTTGCTGGTTTCT+TGG | + | chr4.4:56968194-56968213 | MS.gene046071:CDS | 40.0% |
| !! | ATTTGCTGGTTTCTTGGCAT+TGG | + | chr4.4:56968200-56968219 | MS.gene046071:CDS | 40.0% |
| !! | CACCATGTAAACCCGTTTTT+AGG | - | chr4.4:56968798-56968817 | None:intergenic | 40.0% |
| !! | GCCAGTTTTGTAAGTTGAGT+TGG | + | chr4.4:56969064-56969083 | MS.gene046071:intron | 40.0% |
| !! | GTTTTGAATCTTCCATGTCC+TGG | - | chr4.4:56971109-56971128 | None:intergenic | 40.0% |
| !! | TTTGCTGGTTTCTTGGCATT+GGG | + | chr4.4:56968201-56968220 | MS.gene046071:CDS | 40.0% |
| !!! | AATGGACTAGTCTTTTGGGT+TGG | + | chr4.4:56968722-56968741 | MS.gene046071:intron | 40.0% |
| !!! | ATGGACTAGTCTTTTGGGTT+GGG | + | chr4.4:56968723-56968742 | MS.gene046071:intron | 40.0% |
| !!! | CACCTAATGGACTAGTCTTT+TGG | + | chr4.4:56968717-56968736 | MS.gene046071:intron | 40.0% |
| !!! | CCGCAATCTTGTACTGATTT+TGG | - | chr4.4:56970137-56970156 | None:intergenic | 40.0% |
| !!! | GGATACACTGTCGTTTTCTT+CGG | + | chr4.4:56970166-56970185 | MS.gene046071:CDS | 40.0% |
| !!! | TGTCGTTTTCTTCGGCATTT+TGG | + | chr4.4:56970174-56970193 | MS.gene046071:CDS | 40.0% |
| AAACAGTACTATGCCAGGTG+AGG | - | chr4.4:56970997-56971016 | None:intergenic | 45.0% | |
| AAACGACAGTGTATCCGAAC+AGG | - | chr4.4:56970162-56970181 | None:intergenic | 45.0% | |
| AAGAGATGTCAGATTTGGGC+TGG | - | chr4.4:56969092-56969111 | None:intergenic | 45.0% | |
| ACAAGATTGCGGAACCTGTT+CGG | + | chr4.4:56970145-56970164 | MS.gene046071:CDS | 45.0% | |
| ACAATGGTAAGCACCCTAGA+AGG | - | chr4.4:56970064-56970083 | None:intergenic | 45.0% | |
| ACATCTGGTAAAGGAGGGAT+TGG | + | chr4.4:56970308-56970327 | MS.gene046071:CDS | 45.0% | |
| ACCCACCTAACATTATTCGG+TGG | - | chr4.4:56968544-56968563 | None:intergenic | 45.0% | |
| ACTATAGGTAACCCTCTCTG+TGG | - | chr4.4:56968506-56968525 | None:intergenic | 45.0% | |
| ACTGCGAAGTATGGTAAGCA+GGG | + | chr4.4:56971507-56971526 | MS.gene046071:CDS | 45.0% | |
| AGACCCACCTTGTAACCTTT+AGG | - | chr4.4:56971606-56971625 | None:intergenic | 45.0% | |
| AGACCTGTCTTACATGCTTC+CGG | + | chr4.4:56970406-56970425 | MS.gene046071:CDS | 45.0% | |
| AGAGAGGGTTACCTATAGTC+TGG | + | chr4.4:56968507-56968526 | MS.gene046071:intron | 45.0% | |
| AGAGATGTCAGATTTGGGCT+GGG | - | chr4.4:56969091-56969110 | None:intergenic | 45.0% | |
| ATAGAGGAAAGGGCTACCAT+CGG | + | chr4.4:56968573-56968592 | MS.gene046071:intron | 45.0% | |
| ATGGCAAAGAACAGAACTGC+AGG | - | chr4.4:56970831-56970850 | None:intergenic | 45.0% | |
| ATGTGCTTCTTTCCAGGACA+TGG | + | chr4.4:56971094-56971113 | MS.gene046071:intron | 45.0% | |
| CACCATTCCGCCTTGTATAT+GGG | - | chr4.4:56970384-56970403 | None:intergenic | 45.0% | |
| CACTCTTAGTCCTGAGTATG+AGG | + | chr4.4:56968879-56968898 | MS.gene046071:intron | 45.0% | |
| CATATACAAGGCGGAATGGT+GGG | + | chr4.4:56970383-56970402 | MS.gene046071:CDS | 45.0% | |
| CATGCTTCCGGAATTCATTC+AGG | + | chr4.4:56970418-56970437 | MS.gene046071:CDS | 45.0% | |
| CGATAGAGTGAAAACCGTCA+TGG | + | chr4.4:56968604-56968623 | MS.gene046071:intron | 45.0% | |
| CTCATACTCAGGACTAAGAG+TGG | - | chr4.4:56968881-56968900 | None:intergenic | 45.0% | |
| CTTCTTGGAGGTCTATTTGC+AGG | + | chr4.4:56971744-56971763 | MS.gene046071:CDS | 45.0% | |
| GAACGGTAGTACTTCACGAT+TGG | - | chr4.4:56970912-56970931 | None:intergenic | 45.0% | |
| GCACCTAAAGGTTACAAGGT+GGG | + | chr4.4:56971600-56971619 | MS.gene046071:intron | 45.0% | |
| GGGACCTGAACAAAATGCTT+TGG | + | chr4.4:56971701-56971720 | MS.gene046071:intron | 45.0% | |
| GTCATGGACGCAACTCTTAA+AGG | + | chr4.4:56968620-56968639 | MS.gene046071:intron | 45.0% | |
| GTGTTTGAGAATTCTCCTGG+TGG | + | chr4.4:56970590-56970609 | MS.gene046071:CDS | 45.0% | |
| GTTACAAGGTGGGTCTGTTA+AGG | + | chr4.4:56971610-56971629 | MS.gene046071:intron | 45.0% | |
| TCTTAGTCCTGAGTATGAGG+AGG | + | chr4.4:56968882-56968901 | MS.gene046071:intron | 45.0% | |
| TCTTGGAGGTCTATTTGCAG+GGG | + | chr4.4:56971746-56971765 | MS.gene046071:CDS | 45.0% | |
| TGCACCTAAAGGTTACAAGG+TGG | + | chr4.4:56971599-56971618 | MS.gene046071:intron | 45.0% | |
| TGCTGCTACAACCTTGACTA+AGG | - | chr4.4:56968325-56968344 | None:intergenic | 45.0% | |
| TGGCAAAGAACAGAACTGCA+GGG | - | chr4.4:56970830-56970849 | None:intergenic | 45.0% | |
| TGGTCCCTCACAAAATCTGT+TGG | + | chr4.4:56968970-56968989 | MS.gene046071:intron | 45.0% | |
| ! | ATGCTGCAATGGTGATTTGC+TGG | + | chr4.4:56968186-56968205 | MS.gene046071:CDS | 45.0% |
| ! | ATTCCGGAAGCATGTAAGAC+AGG | - | chr4.4:56970412-56970431 | None:intergenic | 45.0% |
| ! | GTGGACCAACAGATTTTGTG+AGG | - | chr4.4:56968978-56968997 | None:intergenic | 45.0% |
| !! | TTGCTGGTTTCTTGGCATTG+GGG | + | chr4.4:56968202-56968221 | MS.gene046071:CDS | 45.0% |
| !!! | AACAGTTTTGGATCCTTCGG+AGG | - | chr4.4:56970943-56970962 | None:intergenic | 45.0% |
| ACACAGTTTAGGCACCTGGT+AGG | + | chr4.4:56971253-56971272 | MS.gene046071:intron | 50.0% | |
| AGAGTGGTAGATAGCGTTCG+TGG | - | chr4.4:56968865-56968884 | None:intergenic | 50.0% | |
| CACTGCGAAGTATGGTAAGC+AGG | + | chr4.4:56971506-56971525 | MS.gene046071:CDS | 50.0% | |
| CCACCATTCCGCCTTGTATA+TGG | - | chr4.4:56970385-56970404 | None:intergenic | 50.0% | |
| CCATATACAAGGCGGAATGG+TGG | + | chr4.4:56970382-56970401 | MS.gene046071:CDS | 50.0% | |
| GATCACACAGTTTAGGCACC+TGG | + | chr4.4:56971249-56971268 | MS.gene046071:CDS | 50.0% | |
| GATGGTAGCCCTTTCCTCTA+TGG | - | chr4.4:56968574-56968593 | None:intergenic | 50.0% | |
| GCAGGGCAAATATGCTGCAA+TGG | + | chr4.4:56968175-56968194 | MS.gene046071:intron | 50.0% | |
| GCCGTGTTTGAGAATTCTCC+TGG | + | chr4.4:56970587-56970606 | MS.gene046071:CDS | 50.0% | |
| GCTGATGCCCATATACAAGG+CGG | + | chr4.4:56970374-56970393 | MS.gene046071:CDS | 50.0% | |
| GCTGTGCCCATCTCAAATTC+AGG | - | chr4.4:56968369-56968388 | None:intergenic | 50.0% | |
| GTCACTAGCGATGTGATCGT+AGG | + | chr4.4:56969983-56970002 | MS.gene046071:intron | 50.0% | |
| TAGAGGAAAGGGCTACCATC+GGG | + | chr4.4:56968574-56968593 | MS.gene046071:intron | 50.0% | |
| TGAAGCCGCCATAGAGGAAA+GGG | + | chr4.4:56968563-56968582 | MS.gene046071:intron | 50.0% | |
| TGAGAGTTGGACCACAGAGA+GGG | + | chr4.4:56968492-56968511 | MS.gene046071:intron | 50.0% | |
| TGCCCATATACAAGGCGGAA+TGG | + | chr4.4:56970379-56970398 | MS.gene046071:CDS | 50.0% | |
| TGGTAAGCACCCTAGAAGGA+TGG | - | chr4.4:56970060-56970079 | None:intergenic | 50.0% | |
| TTGAGAGTTGGACCACAGAG+AGG | + | chr4.4:56968491-56968510 | MS.gene046071:intron | 50.0% | |
| TTGCAGGGGTAACACTTGAC+TGG | + | chr4.4:56971760-56971779 | MS.gene046071:CDS | 50.0% | |
| TTGTTGCAGTCGTTCCTTGC+TGG | + | chr4.4:56970515-56970534 | MS.gene046071:intron | 50.0% | |
| ! | CTGAGTATGAGGAGGTGTGT+GGG | + | chr4.4:56968890-56968909 | MS.gene046071:intron | 50.0% |
| ! | GGGTAACACTTGACTGGCTA+TGG | + | chr4.4:56971766-56971785 | MS.gene046071:CDS | 50.0% |
| !! | TGCTGGTTTCTTGGCATTGG+GGG | + | chr4.4:56968203-56968222 | MS.gene046071:CDS | 50.0% |
| ACAGCTGATCTTGCTGCAGC+TGG | + | chr4.4:56970963-56970982 | MS.gene046071:CDS | 55.0% | |
| CATGAGGCTCTGCCACCTAA+TGG | + | chr4.4:56968704-56968723 | MS.gene046071:intron | 55.0% | |
| CATTAGGTGGCAGAGCCTCA+TGG | - | chr4.4:56968706-56968725 | None:intergenic | 55.0% | |
| CCACACACCTCCTCATACTC+AGG | - | chr4.4:56968892-56968911 | None:intergenic | 55.0% | |
| CGAAGTATGGTAAGCAGGGC+TGG | + | chr4.4:56971511-56971530 | MS.gene046071:CDS | 55.0% | |
| GGTAGCCCTTTCCTCTATGG+CGG | - | chr4.4:56968571-56968590 | None:intergenic | 55.0% | |
| GTACTATGCCAGGTGAGGTC+TGG | - | chr4.4:56970992-56971011 | None:intergenic | 55.0% | |
| GTGAAGCCGCCATAGAGGAA+AGG | + | chr4.4:56968562-56968581 | MS.gene046071:intron | 55.0% | |
| TCTCCTGGTGGTCTTCGCAA+AGG | + | chr4.4:56970602-56970621 | MS.gene046071:CDS | 55.0% | |
| TGAGACTCCACCACGTCTTG+AGG | + | chr4.4:56968090-56968109 | MS.gene046071:CDS | 55.0% | |
| ! | CCTGAGTATGAGGAGGTGTG+TGG | + | chr4.4:56968889-56968908 | MS.gene046071:intron | 55.0% |
| ! | CTTCGGAGGCTGCTTTCGAA+CGG | - | chr4.4:56970929-56970948 | None:intergenic | 55.0% |
| ! | GCATTGGGGGTCTTTTCGCT+TGG | + | chr4.4:56968216-56968235 | MS.gene046071:CDS | 55.0% |
| !! | TTGGGTTGGGCTGTCCACAT+GGG | + | chr4.4:56968736-56968755 | MS.gene046071:intron | 55.0% |
| !! | TTTGGGTTGGGCTGTCCACA+TGG | + | chr4.4:56968735-56968754 | MS.gene046071:intron | 55.0% |
| CAGACGCTGCAGAACCAGCA+AGG | - | chr4.4:56970532-56970551 | None:intergenic | 60.0% | |
| CGTTCGAAAGCAGCCTCCGA+AGG | + | chr4.4:56970927-56970946 | MS.gene046071:CDS | 60.0% | |
| GCTCCTTTGCGAAGACCACC+AGG | - | chr4.4:56970608-56970627 | None:intergenic | 60.0% | |
| !! | CTCTATCGGCACTGACCCGA+TGG | - | chr4.4:56968592-56968611 | None:intergenic | 60.0% |
| !! | CTTGCTGGTTCTGCAGCGTC+TGG | + | chr4.4:56970530-56970549 | MS.gene046071:CDS | 60.0% |
| GCTGGCATCCAGACCTCACC+TGG | + | chr4.4:56970981-56971000 | MS.gene046071:CDS | 65.0% | |
| GGTGGGTGAAGCCGCCATAG+AGG | + | chr4.4:56968557-56968576 | MS.gene046071:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 56968079 | 56971809 | 56968079 | ID=MS.gene046071 |
| chr4.4 | mRNA | 56968079 | 56971809 | 56968079 | ID=MS.gene046071.t1;Parent=MS.gene046071 |
| chr4.4 | exon | 56968079 | 56968111 | 56968079 | ID=MS.gene046071.t1.exon1;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56968079 | 56968111 | 56968079 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| chr4.4 | exon | 56968179 | 56968283 | 56968179 | ID=MS.gene046071.t1.exon2;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56968179 | 56968283 | 56968179 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| chr4.4 | exon | 56970052 | 56970207 | 56970052 | ID=MS.gene046071.t1.exon3;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56970052 | 56970207 | 56970052 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| chr4.4 | exon | 56970296 | 56970439 | 56970296 | ID=MS.gene046071.t1.exon4;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56970296 | 56970439 | 56970296 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| chr4.4 | exon | 56970524 | 56970629 | 56970524 | ID=MS.gene046071.t1.exon5;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56970524 | 56970629 | 56970524 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| chr4.4 | exon | 56970835 | 56971007 | 56970835 | ID=MS.gene046071.t1.exon6;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56970835 | 56971007 | 56970835 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| chr4.4 | exon | 56971110 | 56971270 | 56971110 | ID=MS.gene046071.t1.exon7;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56971110 | 56971270 | 56971110 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| chr4.4 | exon | 56971359 | 56971617 | 56971359 | ID=MS.gene046071.t1.exon8;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56971359 | 56971617 | 56971359 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| chr4.4 | exon | 56971702 | 56971809 | 56971702 | ID=MS.gene046071.t1.exon9;Parent=MS.gene046071.t1 |
| chr4.4 | CDS | 56971702 | 56971809 | 56971702 | ID=cds.MS.gene046071.t1;Parent=MS.gene046071.t1 |
| Gene Sequence |
| Protein sequence |
