Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45320.t1 | KEH37809.1 | 95.8 | 402 | 17 | 0 | 1 | 402 | 1 | 402 | 3.20E-214 | 754.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45320.t1 | Q9M0Y3 | 66.9 | 399 | 131 | 1 | 4 | 402 | 7 | 404 | 1.2e-148 | 527.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45320.t1 | A0A072V6W8 | 95.8 | 402 | 17 | 0 | 1 | 402 | 1 | 402 | 2.3e-214 | 754.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064218 | MS.gene45320 | PPI |
| MS.gene51411 | MS.gene45320 | PPI |
| MS.gene45320 | MS.gene029003 | PPI |
| MS.gene064214 | MS.gene45320 | PPI |
| MS.gene35750 | MS.gene45320 | PPI |
| MS.gene51416 | MS.gene45320 | PPI |
| MS.gene046074 | MS.gene45320 | PPI |
| MS.gene064217 | MS.gene45320 | PPI |
| MS.gene45320 | MS.gene51414 | PPI |
| MS.gene45316 | MS.gene45320 | PPI |
| MS.gene45320 | MS.gene043342 | PPI |
| MS.gene046073 | MS.gene45320 | PPI |
| MS.gene046071 | MS.gene45320 | PPI |
| MS.gene45318 | MS.gene45320 | PPI |
| MS.gene31551 | MS.gene45320 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45320.t1 | MTR_2g047968 | 95.771 | 402 | 17 | 0 | 1 | 402 | 1 | 402 | 0.0 | 739 |
| MS.gene45320.t1 | MTR_0008s0170 | 79.699 | 399 | 81 | 0 | 4 | 402 | 4 | 402 | 0.0 | 652 |
| MS.gene45320.t1 | MTR_0008s0130 | 75.879 | 398 | 96 | 0 | 5 | 402 | 5 | 402 | 0.0 | 622 |
| MS.gene45320.t1 | MTR_4g050990 | 75.871 | 402 | 97 | 0 | 1 | 402 | 1 | 402 | 0.0 | 613 |
| MS.gene45320.t1 | MTR_2g089520 | 75.871 | 402 | 97 | 0 | 1 | 402 | 1 | 402 | 0.0 | 613 |
| MS.gene45320.t1 | MTR_2g011600 | 69.018 | 397 | 121 | 1 | 7 | 401 | 14 | 410 | 0.0 | 556 |
| MS.gene45320.t1 | MTR_1g071120 | 72.206 | 349 | 88 | 3 | 11 | 358 | 53 | 393 | 6.87e-178 | 503 |
| MS.gene45320.t1 | MTR_2g011580 | 67.209 | 369 | 120 | 1 | 34 | 401 | 1 | 369 | 1.02e-176 | 498 |
| MS.gene45320.t1 | MTR_2g011600 | 66.667 | 357 | 117 | 1 | 47 | 401 | 3 | 359 | 3.39e-169 | 478 |
| MS.gene45320.t1 | MTR_8g007285 | 58.036 | 336 | 137 | 2 | 52 | 384 | 2 | 336 | 6.44e-132 | 384 |
| MS.gene45320.t1 | MTR_0003s0470 | 34.328 | 402 | 232 | 12 | 11 | 401 | 26 | 406 | 7.17e-54 | 184 |
| MS.gene45320.t1 | MTR_3g462280 | 31.266 | 387 | 239 | 9 | 23 | 401 | 47 | 414 | 1.50e-43 | 157 |
| MS.gene45320.t1 | MTR_4g114710 | 28.606 | 416 | 245 | 14 | 4 | 401 | 8 | 389 | 8.58e-36 | 135 |
| MS.gene45320.t1 | MTR_2g011530 | 67.391 | 92 | 29 | 1 | 278 | 368 | 2 | 93 | 1.33e-35 | 126 |
| MS.gene45320.t1 | MTR_2g011540 | 48.889 | 135 | 62 | 1 | 52 | 179 | 2 | 136 | 9.42e-34 | 123 |
| MS.gene45320.t1 | MTR_2g011560 | 39.474 | 152 | 36 | 3 | 177 | 323 | 17 | 117 | 1.04e-17 | 79.0 |
| MS.gene45320.t1 | MTR_2g011570 | 53.846 | 65 | 23 | 1 | 137 | 201 | 1 | 58 | 1.27e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45320.t1 | AT4G05120 | 66.917 | 399 | 131 | 1 | 4 | 402 | 7 | 404 | 0.0 | 548 |
| MS.gene45320.t1 | AT4G05120 | 66.917 | 399 | 131 | 1 | 4 | 402 | 7 | 404 | 0.0 | 548 |
| MS.gene45320.t1 | AT4G05110 | 63.910 | 399 | 143 | 1 | 4 | 402 | 7 | 404 | 0.0 | 526 |
| MS.gene45320.t1 | AT4G05110 | 64.070 | 398 | 142 | 1 | 5 | 402 | 8 | 404 | 0.0 | 525 |
| MS.gene45320.t1 | AT4G05110 | 64.070 | 398 | 142 | 1 | 5 | 402 | 8 | 404 | 0.0 | 525 |
| MS.gene45320.t1 | AT4G05140 | 62.935 | 402 | 149 | 0 | 4 | 405 | 7 | 408 | 0.0 | 521 |
| MS.gene45320.t1 | AT4G05130 | 62.687 | 402 | 149 | 1 | 4 | 405 | 7 | 407 | 0.0 | 520 |
| MS.gene45320.t1 | AT3G09990 | 62.341 | 393 | 147 | 1 | 11 | 402 | 13 | 405 | 9.84e-179 | 504 |
| MS.gene45320.t1 | AT1G61630 | 60.848 | 401 | 154 | 2 | 4 | 402 | 5 | 404 | 2.25e-176 | 498 |
| MS.gene45320.t1 | AT1G70330 | 29.695 | 394 | 253 | 8 | 16 | 401 | 64 | 441 | 1.17e-47 | 169 |
| MS.gene45320.t1 | AT1G02630 | 28.606 | 409 | 250 | 10 | 1 | 401 | 6 | 380 | 4.99e-42 | 152 |
| MS.gene45320.t1 | AT1G02630 | 28.169 | 213 | 150 | 3 | 1 | 212 | 6 | 216 | 3.23e-23 | 100 |
Find 98 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCAGTCTTGTACTGATTT+TGG | 0.152135 | 4.3:-53622008 | None:intergenic |
| GTACTTCACGATTGGTAATT+TGG | 0.154465 | 4.3:-53622777 | None:intergenic |
| ATATTCTTGACATCCTTCTT+AGG | 0.171486 | 4.3:+53623413 | MS.gene45320:CDS |
| GTATATCAGCCATTTATATT+TGG | 0.187219 | 4.3:+53621956 | MS.gene45320:CDS |
| TGCATAGTTAGTGGTGTATT+TGG | 0.235166 | 4.3:+53622221 | MS.gene45320:CDS |
| CTTCTTGGAGGTCTATTTGC+AGG | 0.236906 | 4.3:+53623629 | MS.gene45320:CDS |
| CCACCATTCCGCCTTGTATA+TGG | 0.254233 | 4.3:-53622256 | None:intergenic |
| ATTTGGAACACAAGCAATAT+TGG | 0.269430 | 4.3:+53621973 | MS.gene45320:CDS |
| TTTGCTGGTTTCTTGGCATT+GGG | 0.292449 | 4.3:+53620640 | MS.gene45320:CDS |
| GCTTGTGTTCCAAATATAAA+TGG | 0.295680 | 4.3:-53621965 | None:intergenic |
| CATGCTTCCGGAATTCATTC+AGG | 0.308853 | 4.3:+53622292 | MS.gene45320:CDS |
| ATTTGCTGGTTTCTTGGCAT+TGG | 0.318253 | 4.3:+53620639 | MS.gene45320:CDS |
| TGCAGAAATACCATCCTTCT+AGG | 0.328197 | 4.3:+53621921 | MS.gene45320:intron |
| ATGTTAATGTTGTGTCTTCT+TGG | 0.334137 | 4.3:+53623614 | MS.gene45320:CDS |
| TACTTCACGATTGGTAATTT+GGG | 0.335339 | 4.3:-53622776 | None:intergenic |
| TTGTTGCAGTCGTTCCTTGC+TGG | 0.335887 | 4.3:+53622389 | MS.gene45320:intron |
| AAGATCAGCTGTAACAGTTT+TGG | 0.342976 | 4.3:-53622828 | None:intergenic |
| TTACTATATTTACTTGTTCC+CGG | 0.355375 | 4.3:+53620701 | MS.gene45320:CDS |
| ACAATGTTAGCACATATATT+AGG | 0.355997 | 4.3:-53623069 | None:intergenic |
| ATGGTGATTTGCTGGTTTCT+TGG | 0.368089 | 4.3:+53620633 | MS.gene45320:CDS |
| AGGAATAAAACAATTGTTAT+CGG | 0.393822 | 4.3:+53623018 | MS.gene45320:CDS |
| AGACCTGTCTTACATGCTTC+CGG | 0.398247 | 4.3:+53622280 | MS.gene45320:CDS |
| GGGACCTGAACAAAATGCTT+TGG | 0.400480 | 4.3:+53623586 | MS.gene45320:intron |
| CTTGCTGGTTCTGCAGCGTC+TGG | 0.403809 | 4.3:+53622404 | MS.gene45320:CDS |
| TAGTTGGATTTAACAACATC+TGG | 0.403943 | 4.3:+53622167 | MS.gene45320:intron |
| TCACTACAGCAGTAATTTCT+CGG | 0.407068 | 4.3:+53623333 | MS.gene45320:CDS |
| AGACCCACCTTGTAACCTTT+AGG | 0.407785 | 4.3:-53623479 | None:intergenic |
| ATGCAGCAATGGTGATTTGC+TGG | 0.414070 | 4.3:+53620625 | MS.gene45320:CDS |
| CGAAGTATGGTAAGCAGGGC+TGG | 0.420147 | 4.3:+53623387 | MS.gene45320:CDS |
| ATTGGTATATGCATAGTTAG+TGG | 0.422297 | 4.3:+53622212 | MS.gene45320:CDS |
| CACCATTCCGCCTTGTATAT+GGG | 0.424233 | 4.3:-53622255 | None:intergenic |
| ATGCTGACCTGAATGAATTC+CGG | 0.433570 | 4.3:-53622299 | None:intergenic |
| CATGGAAAATTCAAAACAAC+AGG | 0.436749 | 4.3:+53622988 | MS.gene45320:CDS |
| TATTCTTGACATCCTTCTTA+GGG | 0.439352 | 4.3:+53623414 | MS.gene45320:CDS |
| TTCTTGGAGGTCTATTTGCA+GGG | 0.442770 | 4.3:+53623630 | MS.gene45320:CDS |
| GGACCTGAACAAAATGCTTT+GGG | 0.445382 | 4.3:+53623587 | MS.gene45320:CDS |
| GTACTCCGTTGGGTGAGGTC+TGG | 0.446753 | 4.3:-53622865 | None:intergenic |
| GATACCGGATCACACGGTTT+AGG | 0.454328 | 4.3:+53623118 | MS.gene45320:CDS |
| CACCGCGAAGTATGGTAAGC+AGG | 0.460170 | 4.3:+53623382 | MS.gene45320:CDS |
| GTATCTTCTGATAAGAAGCC+AGG | 0.466762 | 4.3:-53623100 | None:intergenic |
| TTAATGTTGTGTCTTCTTGG+AGG | 0.472371 | 4.3:+53623617 | MS.gene45320:CDS |
| ACAATGGTAAGTACCCTAGA+AGG | 0.477039 | 4.3:-53621935 | None:intergenic |
| AAGTGAAAACACAGATAGTA+AGG | 0.483651 | 4.3:-53623451 | None:intergenic |
| ACTCGTGAAAATCTTGAAGA+TGG | 0.489152 | 4.3:+53623295 | MS.gene45320:CDS |
| ACAGCTGATCTTGCTGCAGC+TGG | 0.489465 | 4.3:+53622839 | MS.gene45320:CDS |
| ACAAGACTGCGGAACCTGTT+CGG | 0.491522 | 4.3:+53622019 | MS.gene45320:CDS |
| AAACGACAGTGTATCCGAAC+AGG | 0.499026 | 4.3:-53622033 | None:intergenic |
| AAAAGAAACAGTACTCCGTT+GGG | 0.502452 | 4.3:-53622875 | None:intergenic |
| ACATCTGGTAAAGGAGGGAT+TGG | 0.504619 | 4.3:+53622182 | MS.gene45320:CDS |
| TGCTGGTTTCTTGGCATTGG+GGG | 0.514420 | 4.3:+53620642 | MS.gene45320:CDS |
| GCCGTGTTTGAGAATTCTCC+TGG | 0.515360 | 4.3:+53622461 | MS.gene45320:CDS |
| GGTGCCTAAACCGTGTGATC+CGG | 0.515923 | 4.3:-53623122 | None:intergenic |
| GAACGGTAGTACTTCACGAT+TGG | 0.520220 | 4.3:-53622785 | None:intergenic |
| TTGCTGGTTTCTTGGCATTG+GGG | 0.520379 | 4.3:+53620641 | MS.gene45320:CDS |
| CTTCGGAGGCTGCTTTCGAA+CGG | 0.527518 | 4.3:-53622802 | None:intergenic |
| TTCTGCACCTAAAGGTTACA+AGG | 0.528109 | 4.3:+53623472 | MS.gene45320:CDS |
| GCCCTGCTTACCATACTTCG+CGG | 0.531795 | 4.3:-53623384 | None:intergenic |
| TAAAAGAAACAGTACTCCGT+TGG | 0.532620 | 4.3:-53622876 | None:intergenic |
| CATATACAAGGCGGAATGGT+GGG | 0.535308 | 4.3:+53622257 | MS.gene45320:CDS |
| CGTTCGAAAGCAGCCTCCGA+AGG | 0.538878 | 4.3:+53622803 | MS.gene45320:CDS |
| ACAGATAGTAAGGTAACCAT+TGG | 0.542468 | 4.3:-53623441 | None:intergenic |
| GATTTAACAACATCTGGTAA+AGG | 0.548751 | 4.3:+53622173 | MS.gene45320:CDS |
| ACCATTGGATAACCCTAAGA+AGG | 0.551519 | 4.3:-53623426 | None:intergenic |
| GCTCCTTTGCGAAGACCACC+AGG | 0.551931 | 4.3:-53622479 | None:intergenic |
| TATGGTTAATAGGTAAAGGA+TGG | 0.554780 | 4.3:+53623669 | MS.gene45320:intron |
| AGCAATATTGGCTTACAATG+AGG | 0.563692 | 4.3:+53621985 | MS.gene45320:CDS |
| AAACAGTACTCCGTTGGGTG+AGG | 0.570284 | 4.3:-53622870 | None:intergenic |
| GGCTTCTTATCAGAAGATAC+CGG | 0.571927 | 4.3:+53623103 | MS.gene45320:CDS |
| TCCTTCTTAGGGTTATCCAA+TGG | 0.573027 | 4.3:+53623425 | MS.gene45320:CDS |
| TTAACAACATCTGGTAAAGG+AGG | 0.573215 | 4.3:+53622176 | MS.gene45320:CDS |
| ATAGCTGATGCCCATATACA+AGG | 0.577441 | 4.3:+53622245 | MS.gene45320:CDS |
| ATTCCGGAAGCATGTAAGAC+AGG | 0.580637 | 4.3:-53622283 | None:intergenic |
| TGAGACTCCACCACGTCTTG+AGG | 0.583689 | 4.3:+53620529 | MS.gene45320:CDS |
| TGCCCATATACAAGGCGGAA+TGG | 0.587617 | 4.3:+53622253 | MS.gene45320:CDS |
| GCAGAAATACCATCCTTCTA+GGG | 0.596513 | 4.3:+53621922 | MS.gene45320:intron |
| ACCGCGAAGTATGGTAAGCA+GGG | 0.599811 | 4.3:+53623383 | MS.gene45320:CDS |
| GCAGGGCAAATATGCAGCAA+TGG | 0.599931 | 4.3:+53620614 | MS.gene45320:intron |
| GATCACACGGTTTAGGCACC+TGG | 0.602619 | 4.3:+53623125 | MS.gene45320:CDS |
| CCATATACAAGGCGGAATGG+TGG | 0.604392 | 4.3:+53622256 | MS.gene45320:CDS |
| TCTTGGAGGTCTATTTGCAG+GGG | 0.607411 | 4.3:+53623631 | MS.gene45320:CDS |
| TAACAACATCTGGTAAAGGA+GGG | 0.607696 | 4.3:+53622177 | MS.gene45320:CDS |
| TCTCCTGGTGGTCTTCGCAA+AGG | 0.610206 | 4.3:+53622476 | MS.gene45320:CDS |
| TATAAATGGCTGATATACAA+TGG | 0.614615 | 4.3:-53621951 | None:intergenic |
| TATCTTCTGATAAGAAGCCA+GGG | 0.638227 | 4.3:-53623099 | None:intergenic |
| CAGACGCTGCAGAACCAGCA+AGG | 0.638516 | 4.3:-53622403 | None:intergenic |
| TCAGAAGATACCGGATCACA+CGG | 0.639655 | 4.3:+53623112 | MS.gene45320:CDS |
| TCAAAACAACAGGATCGCAA+AGG | 0.642728 | 4.3:+53622998 | MS.gene45320:CDS |
| TGGTAAGTACCCTAGAAGGA+TGG | 0.653256 | 4.3:-53621931 | None:intergenic |
| GGTATCCAGACCTCACCCAA+CGG | 0.654757 | 4.3:+53622860 | MS.gene45320:CDS |
| ACCAGGAGAATTCTCAAACA+CGG | 0.660617 | 4.3:-53622462 | None:intergenic |
| TTCGCGGTGAAATAAAACGC+TGG | 0.670102 | 4.3:-53623368 | None:intergenic |
| TATATTACCTCAAGACGTGG+TGG | 0.674673 | 4.3:-53620536 | None:intergenic |
| GTGTTTGAGAATTCTCCTGG+TGG | 0.694597 | 4.3:+53622464 | MS.gene45320:CDS |
| TGGAGTCTCACTGATGACCA+TGG | 0.695742 | 4.3:-53620516 | None:intergenic |
| TTATATATTACCTCAAGACG+TGG | 0.729092 | 4.3:-53620539 | None:intergenic |
| CCAAAATCAGTACAAGACTG+CGG | 0.733677 | 4.3:+53622008 | MS.gene45320:CDS |
| GCTGATGCCCATATACAAGG+CGG | 0.752747 | 4.3:+53622248 | MS.gene45320:CDS |
| AAGATCAAACACATTAAACG+TGG | 0.759247 | 4.3:-53623255 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAAAACTTTTATTCAA+AGG | - | chr4.3:53621887-53621906 | None:intergenic | 10.0% |
| !!! | TATGTTTTTTATATTTTGTA+GGG | + | chr4.3:53623566-53623585 | MS.gene45320:intron | 10.0% |
| !! | ATTGTAAAATCTTAAGATTT+GGG | - | chr4.3:53621443-53621462 | None:intergenic | 15.0% |
| !! | GATATCAAATTTAACAATAA+AGG | + | chr4.3:53621665-53621684 | MS.gene45320:intron | 15.0% |
| !! | TATTGTAAAATCTTAAGATT+TGG | - | chr4.3:53621444-53621463 | None:intergenic | 15.0% |
| !!! | AAAATTATTGAGTTTGTTAA+AGG | - | chr4.3:53621539-53621558 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAGGAAAAATGT+AGG | + | chr4.3:53621551-53621570 | MS.gene45320:intron | 15.0% |
| !!! | GTATGTTTTTTATATTTTGT+AGG | + | chr4.3:53623565-53623584 | MS.gene45320:intron | 15.0% |
| !!! | TAACAAACTCAATAATTTTA+AGG | + | chr4.3:53621540-53621559 | MS.gene45320:intron | 15.0% |
| !!! | TAATTTTAAGGAAAAATGTA+GGG | + | chr4.3:53621552-53621571 | MS.gene45320:intron | 15.0% |
| !! | AAATTGTAATTACTACTATG+AGG | + | chr4.3:53622324-53622343 | MS.gene45320:intron | 20.0% |
| !! | AGGAATAAAACAATTGTTAT+CGG | + | chr4.3:53623018-53623037 | MS.gene45320:CDS | 20.0% |
| !! | ATGTTATCAAAATAACAATC+TGG | - | chr4.3:53621590-53621609 | None:intergenic | 20.0% |
| !! | TAATCTGAATCTTAACAATT+AGG | - | chr4.3:53622938-53622957 | None:intergenic | 20.0% |
| !! | TCAACATATACATTTGATAA+TGG | + | chr4.3:53622361-53622380 | MS.gene45320:intron | 20.0% |
| !! | TGAGAAAATAGATAAATTAC+CGG | - | chr4.3:53620723-53620742 | None:intergenic | 20.0% |
| !! | TGTATATGATGTATAGTTTA+AGG | - | chr4.3:53622614-53622633 | None:intergenic | 20.0% |
| !! | TGTTATCAAAATAACAATCT+GGG | - | chr4.3:53621589-53621608 | None:intergenic | 20.0% |
| !!! | ATTTAAAGTTTTAAACCATG+AGG | + | chr4.3:53621135-53621154 | MS.gene45320:intron | 20.0% |
| ! | AACATAAATGCATATTCTAG+AGG | - | chr4.3:53622119-53622138 | None:intergenic | 25.0% |
| ! | AAGCACTTAAAATTGAACTA+AGG | - | chr4.3:53621633-53621652 | None:intergenic | 25.0% |
| ! | AAGCTCAAAAAATGATGATA+TGG | - | chr4.3:53622726-53622745 | None:intergenic | 25.0% |
| ! | AAGTATACAAACAAATGAAC+AGG | - | chr4.3:53622091-53622110 | None:intergenic | 25.0% |
| ! | ACAATGTTAGCACATATATT+AGG | - | chr4.3:53623072-53623091 | None:intergenic | 25.0% |
| ! | ATATACACAATGTAGAACAA+AGG | - | chr4.3:53623174-53623193 | None:intergenic | 25.0% |
| ! | ATTACTACTATGAGGTTTAA+AGG | + | chr4.3:53622332-53622351 | MS.gene45320:intron | 25.0% |
| ! | ATTTGTGGATTTCAATTCTT+TGG | + | chr4.3:53620585-53620604 | MS.gene45320:intron | 25.0% |
| ! | GACAATAATACAAAACTTTG+AGG | - | chr4.3:53622573-53622592 | None:intergenic | 25.0% |
| ! | GAGAAAATAGATAAATTACC+GGG | - | chr4.3:53620722-53620741 | None:intergenic | 25.0% |
| ! | GAGATATGATATGAAAATGT+GGG | + | chr4.3:53621365-53621384 | MS.gene45320:intron | 25.0% |
| ! | GTATATCAGCCATTTATATT+TGG | + | chr4.3:53621956-53621975 | MS.gene45320:CDS | 25.0% |
| ! | TATAAATGGCTGATATACAA+TGG | - | chr4.3:53621954-53621973 | None:intergenic | 25.0% |
| ! | TGAGATATGATATGAAAATG+TGG | + | chr4.3:53621364-53621383 | MS.gene45320:intron | 25.0% |
| ! | TTACTATATTTACTTGTTCC+CGG | + | chr4.3:53620701-53620720 | MS.gene45320:CDS | 25.0% |
| ! | TTCACTCACCTATTATTATT+CGG | - | chr4.3:53620986-53621005 | None:intergenic | 25.0% |
| ! | TTGATATTTCCATTTGTTTC+AGG | + | chr4.3:53623213-53623232 | MS.gene45320:intron | 25.0% |
| !! | AAAATAACAATCTGGGATAT+TGG | - | chr4.3:53621582-53621601 | None:intergenic | 25.0% |
| !! | TAAGCCAATTCTTTGAATTT+TGG | - | chr4.3:53621490-53621509 | None:intergenic | 25.0% |
| !! | TAAGGAGCTTAAACTTTTAA+GGG | + | chr4.3:53623504-53623523 | MS.gene45320:intron | 25.0% |
| !! | TTAAGGAGCTTAAACTTTTA+AGG | + | chr4.3:53623503-53623522 | MS.gene45320:intron | 25.0% |
| !!! | GATTTCAATTCTTTGGAATT+TGG | + | chr4.3:53620592-53620611 | MS.gene45320:intron | 25.0% |
| !!! | GTAAATAAGAGTGTTTTATG+TGG | + | chr4.3:53621111-53621130 | MS.gene45320:intron | 25.0% |
| AAAATCTTAAGATTTGGGCT+GGG | - | chr4.3:53621438-53621457 | None:intergenic | 30.0% | |
| AAACAGACATGCAATATTTG+TGG | + | chr4.3:53620570-53620589 | MS.gene45320:intron | 30.0% | |
| AAATTCTAACAGTTCCATGT+TGG | + | chr4.3:53621209-53621228 | MS.gene45320:intron | 30.0% | |
| AAGATCAAACACATTAAACG+TGG | - | chr4.3:53623258-53623277 | None:intergenic | 30.0% | |
| AAGTGAAAACACAGATAGTA+AGG | - | chr4.3:53623454-53623473 | None:intergenic | 30.0% | |
| AATGTTCTGTTCAGAAAGTT+TGG | - | chr4.3:53621748-53621767 | None:intergenic | 30.0% | |
| ATATGTGATGATTTAAGAGC+TGG | + | chr4.3:53623190-53623209 | MS.gene45320:intron | 30.0% | |
| ATATTCTTGACATCCTTCTT+AGG | + | chr4.3:53623413-53623432 | MS.gene45320:CDS | 30.0% | |
| ATATTGACAAATAATCACCG+TGG | - | chr4.3:53622659-53622678 | None:intergenic | 30.0% | |
| ATGTTAATGTTGTGTCTTCT+TGG | + | chr4.3:53623614-53623633 | MS.gene45320:CDS | 30.0% | |
| ATTGGTATATGCATAGTTAG+TGG | + | chr4.3:53622212-53622231 | MS.gene45320:CDS | 30.0% | |
| ATTTGATAGAAACACGAAAG+TGG | - | chr4.3:53620829-53620848 | None:intergenic | 30.0% | |
| CATGGAAAATTCAAAACAAC+AGG | + | chr4.3:53622988-53623007 | MS.gene45320:CDS | 30.0% | |
| CATTGAAGAGTTAAACATAC+TGG | - | chr4.3:53622504-53622523 | None:intergenic | 30.0% | |
| CTGACCAAAATTCAAAGAAT+TGG | + | chr4.3:53621483-53621502 | MS.gene45320:intron | 30.0% | |
| GATGTTGTTAAATCCAACTA+TGG | - | chr4.3:53622167-53622186 | None:intergenic | 30.0% | |
| GATTTAACAACATCTGGTAA+AGG | + | chr4.3:53622173-53622192 | MS.gene45320:CDS | 30.0% | |
| GCTTGTGTTCCAAATATAAA+TGG | - | chr4.3:53621968-53621987 | None:intergenic | 30.0% | |
| TAAAATCTTAAGATTTGGGC+TGG | - | chr4.3:53621439-53621458 | None:intergenic | 30.0% | |
| TAACTCTTCAATGCTTAGTT+TGG | + | chr4.3:53622511-53622530 | MS.gene45320:intron | 30.0% | |
| TACCTAAAAACGTGTTTACA+TGG | + | chr4.3:53621240-53621259 | MS.gene45320:intron | 30.0% | |
| TAGTTGGATTTAACAACATC+TGG | + | chr4.3:53622167-53622186 | MS.gene45320:intron | 30.0% | |
| TATGGTTAATAGGTAAAGGA+TGG | + | chr4.3:53623669-53623688 | MS.gene45320:intron | 30.0% | |
| TATTCTTGACATCCTTCTTA+GGG | + | chr4.3:53623414-53623433 | MS.gene45320:CDS | 30.0% | |
| TATTGACAAATAATCACCGT+GGG | - | chr4.3:53622658-53622677 | None:intergenic | 30.0% | |
| TTATATATTACCTCAAGACG+TGG | - | chr4.3:53620542-53620561 | None:intergenic | 30.0% | |
| TTTAGTTGAAACCTTAGTCA+AGG | + | chr4.3:53620750-53620769 | MS.gene45320:intron | 30.0% | |
| ! | ATTTGGAACACAAGCAATAT+TGG | + | chr4.3:53621973-53621992 | MS.gene45320:CDS | 30.0% |
| ! | TACTTCACGATTGGTAATTT+GGG | - | chr4.3:53622779-53622798 | None:intergenic | 30.0% |
| ! | TAGTTTCCTGAATTTGAGAT+GGG | + | chr4.3:53620796-53620815 | MS.gene45320:intron | 30.0% |
| !! | CAATAAAAGCACCAATTGTT+GGG | - | chr4.3:53620913-53620932 | None:intergenic | 30.0% |
| !! | TCAATAAAAGCACCAATTGT+TGG | - | chr4.3:53620914-53620933 | None:intergenic | 30.0% |
| AAAAGAAACAGTACTCCGTT+GGG | - | chr4.3:53622878-53622897 | None:intergenic | 35.0% | |
| ACAGATAGTAAGGTAACCAT+TGG | - | chr4.3:53623444-53623463 | None:intergenic | 35.0% | |
| ACTCACCTATTATTATTCGG+TGG | - | chr4.3:53620983-53621002 | None:intergenic | 35.0% | |
| ACTCGTGAAAATCTTGAAGA+TGG | + | chr4.3:53623295-53623314 | MS.gene45320:CDS | 35.0% | |
| AGTGCTTAAATCCCAACAAT+TGG | + | chr4.3:53620899-53620918 | MS.gene45320:intron | 35.0% | |
| ATAGAGGAAAGGGCTATTAT+CGG | + | chr4.3:53621012-53621031 | MS.gene45320:intron | 35.0% | |
| CTAAAAACGTGTTTACATGG+TGG | + | chr4.3:53621243-53621262 | MS.gene45320:intron | 35.0% | |
| CTAGTTTCCTGAATTTGAGA+TGG | + | chr4.3:53620795-53620814 | MS.gene45320:intron | 35.0% | |
| GTGTTCCACCGAATAATAAT+AGG | + | chr4.3:53620975-53620994 | MS.gene45320:intron | 35.0% | |
| TAAAAGAAACAGTACTCCGT+TGG | - | chr4.3:53622879-53622898 | None:intergenic | 35.0% | |
| TAACAACATCTGGTAAAGGA+GGG | + | chr4.3:53622177-53622196 | MS.gene45320:CDS | 35.0% | |
| TAACTAATGTGCTTCTTTCC+AGG | + | chr4.3:53622964-53622983 | MS.gene45320:intron | 35.0% | |
| TAGGTAAAACTCATCCAACA+TGG | - | chr4.3:53621226-53621245 | None:intergenic | 35.0% | |
| TATCTTCTGATAAGAAGCCA+GGG | - | chr4.3:53623102-53623121 | None:intergenic | 35.0% | |
| TCACTACAGCAGTAATTTCT+CGG | + | chr4.3:53623333-53623352 | MS.gene45320:CDS | 35.0% | |
| TCCAACTATGGCAAGTAAAT+AGG | - | chr4.3:53622155-53622174 | None:intergenic | 35.0% | |
| TCCTATTTACTTGCCATAGT+TGG | + | chr4.3:53622151-53622170 | MS.gene45320:intron | 35.0% | |
| TCTTACCTGACAAAATCTGT+TGG | + | chr4.3:53621274-53621293 | MS.gene45320:intron | 35.0% | |
| TGCATAGTTAGTGGTGTATT+TGG | + | chr4.3:53622221-53622240 | MS.gene45320:CDS | 35.0% | |
| TGGCTATGGTTAATAGGTAA+AGG | + | chr4.3:53623665-53623684 | MS.gene45320:intron | 35.0% | |
| TGTCCATGACAAATTGAAAG+AGG | - | chr4.3:53622913-53622932 | None:intergenic | 35.0% | |
| TGTTAGAATTTAAGCCCATG+AGG | - | chr4.3:53621200-53621219 | None:intergenic | 35.0% | |
| TTAACAACATCTGGTAAAGG+AGG | + | chr4.3:53622176-53622195 | MS.gene45320:CDS | 35.0% | |
| TTAATGTTGTGTCTTCTTGG+AGG | + | chr4.3:53623617-53623636 | MS.gene45320:CDS | 35.0% | |
| TTCTTCAAATCATACGCATC+TGG | + | chr4.3:53621822-53621841 | MS.gene45320:intron | 35.0% | |
| ! | AAGAGCATACCTGAAACAAA+TGG | - | chr4.3:53623225-53623244 | None:intergenic | 35.0% |
| ! | AAGATCAGCTGTAACAGTTT+TGG | - | chr4.3:53622831-53622850 | None:intergenic | 35.0% |
| ! | ACACTCTTATTTACTCGATG+TGG | - | chr4.3:53621105-53621124 | None:intergenic | 35.0% |
| ! | ATCTTCAAGATTTTCACGAG+TGG | - | chr4.3:53623296-53623315 | None:intergenic | 35.0% |
| ! | CACCATGTAAACACGTTTTT+AGG | - | chr4.3:53621245-53621264 | None:intergenic | 35.0% |
| ! | CACTCTTATTTACTCGATGT+GGG | - | chr4.3:53621104-53621123 | None:intergenic | 35.0% |
| ! | CACTCTTATTTAGTCGATGT+GGG | - | chr4.3:53620883-53620902 | None:intergenic | 35.0% |
| ! | CTAACATTGTCTATTTTCCC+TGG | + | chr4.3:53623082-53623101 | MS.gene45320:CDS | 35.0% |
| ! | GTACTTCACGATTGGTAATT+TGG | - | chr4.3:53622780-53622799 | None:intergenic | 35.0% |
| ! | TATTTCTGCACAAGGAAGAA+AGG | - | chr4.3:53621911-53621930 | None:intergenic | 35.0% |
| !! | AGCAATATTGGCTTACAATG+AGG | + | chr4.3:53621985-53622004 | MS.gene45320:CDS | 35.0% |
| !! | CAATTCTTTGGAATTTGGCA+GGG | + | chr4.3:53620597-53620616 | MS.gene45320:intron | 35.0% |
| !! | CCAGTTTTGTAAGTTGAGTT+GGG | + | chr4.3:53621412-53621431 | MS.gene45320:intron | 35.0% |
| !! | GTTTTGAATTTTCCATGTCC+TGG | - | chr4.3:53622985-53623004 | None:intergenic | 35.0% |
| !! | TCAATTCTTTGGAATTTGGC+AGG | + | chr4.3:53620596-53620615 | MS.gene45320:intron | 35.0% |
| !! | TTGGTGCTTTTATTGAGAGT+TGG | + | chr4.3:53620918-53620937 | MS.gene45320:intron | 35.0% |
| !! | TTTCCCAAAGCATTTTGTTC+AGG | - | chr4.3:53623593-53623612 | None:intergenic | 35.0% |
| !! | TTTTATTTCACCGCGAAGTA+TGG | + | chr4.3:53623374-53623393 | MS.gene45320:CDS | 35.0% |
| !!! | AACTCTTGTTTTAACTCCCA+CGG | + | chr4.3:53622639-53622658 | MS.gene45320:intron | 35.0% |
| !!! | TGTAACAGTTTTGGATCCTT+CGG | - | chr4.3:53622822-53622841 | None:intergenic | 35.0% |
| !!! | TGTCGTTTTCTTTGGCATTT+TGG | + | chr4.3:53622048-53622067 | MS.gene45320:CDS | 35.0% |
| AAATCGCATATGAACCTACC+AGG | - | chr4.3:53623146-53623165 | None:intergenic | 40.0% | |
| AACACCTTAATCCAGACTAG+AGG | - | chr4.3:53620960-53620979 | None:intergenic | 40.0% | |
| AAGGACAACAGACACGAAAT+GGG | - | chr4.3:53622595-53622614 | None:intergenic | 40.0% | |
| ACAATGGTAAGTACCCTAGA+AGG | - | chr4.3:53621938-53621957 | None:intergenic | 40.0% | |
| ACCAGGAGAATTCTCAAACA+CGG | - | chr4.3:53622465-53622484 | None:intergenic | 40.0% | |
| ACCATTGGATAACCCTAAGA+AGG | - | chr4.3:53623429-53623448 | None:intergenic | 40.0% | |
| ATAGCTGATGCCCATATACA+AGG | + | chr4.3:53622245-53622264 | MS.gene45320:CDS | 40.0% | |
| ATGCTGACCTGAATGAATTC+CGG | - | chr4.3:53622302-53622321 | None:intergenic | 40.0% | |
| CACATCGCTAGTGACAATAT+CGG | - | chr4.3:53621852-53621871 | None:intergenic | 40.0% | |
| CCAAAATCAGTACAAGACTG+CGG | + | chr4.3:53622008-53622027 | MS.gene45320:CDS | 40.0% | |
| CCCAACTCAACTTACAAAAC+TGG | - | chr4.3:53621415-53621434 | None:intergenic | 40.0% | |
| CGTCCTCTTTCAATTTGTCA+TGG | + | chr4.3:53622907-53622926 | MS.gene45320:intron | 40.0% | |
| GATAATAGCCCTTTCCTCTA+TGG | - | chr4.3:53621013-53621032 | None:intergenic | 40.0% | |
| GCAGAAATACCATCCTTCTA+GGG | + | chr4.3:53621922-53621941 | MS.gene45320:intron | 40.0% | |
| GGACCTGAACAAAATGCTTT+GGG | + | chr4.3:53623587-53623606 | MS.gene45320:CDS | 40.0% | |
| GGCTTCTTATCAGAAGATAC+CGG | + | chr4.3:53623103-53623122 | MS.gene45320:CDS | 40.0% | |
| GTATCTTCTGATAAGAAGCC+AGG | - | chr4.3:53623103-53623122 | None:intergenic | 40.0% | |
| GTTACCTCTAGTCTGGATTA+AGG | + | chr4.3:53620953-53620972 | MS.gene45320:intron | 40.0% | |
| TAAGGACAACAGACACGAAA+TGG | - | chr4.3:53622596-53622615 | None:intergenic | 40.0% | |
| TAGAGGAAAGGGCTATTATC+GGG | + | chr4.3:53621013-53621032 | MS.gene45320:intron | 40.0% | |
| TATATTACCTCAAGACGTGG+TGG | - | chr4.3:53620539-53620558 | None:intergenic | 40.0% | |
| TATCTACCACTCTTAGTCCT+GGG | + | chr4.3:53621308-53621327 | MS.gene45320:intron | 40.0% | |
| TCAAAACAACAGGATCGCAA+AGG | + | chr4.3:53622998-53623017 | MS.gene45320:CDS | 40.0% | |
| TCCTTCTTAGGGTTATCCAA+TGG | + | chr4.3:53623425-53623444 | MS.gene45320:CDS | 40.0% | |
| TGAGAGTTGGAACACAGAAA+GGG | + | chr4.3:53620931-53620950 | MS.gene45320:intron | 40.0% | |
| TGCAGAAATACCATCCTTCT+AGG | + | chr4.3:53621921-53621940 | MS.gene45320:intron | 40.0% | |
| TTCTGCACCTAAAGGTTACA+AGG | + | chr4.3:53623472-53623491 | MS.gene45320:CDS | 40.0% | |
| TTCTTGGAGGTCTATTTGCA+GGG | + | chr4.3:53623630-53623649 | MS.gene45320:CDS | 40.0% | |
| TTGAGAGTTGGAACACAGAA+AGG | + | chr4.3:53620930-53620949 | MS.gene45320:intron | 40.0% | |
| ! | AAGGATGGTATTTCTGCACA+AGG | - | chr4.3:53621919-53621938 | None:intergenic | 40.0% |
| ! | ACCCAAAAGACTAGTCCATT+AGG | - | chr4.3:53621169-53621188 | None:intergenic | 40.0% |
| ! | CAAAAGACTAGTCCATTAGG+GGG | - | chr4.3:53621166-53621185 | None:intergenic | 40.0% |
| ! | CACGACAGTTTTCACTCTAT+CGG | - | chr4.3:53621045-53621064 | None:intergenic | 40.0% |
| ! | CCAAAAGACTAGTCCATTAG+GGG | - | chr4.3:53621167-53621186 | None:intergenic | 40.0% |
| ! | CCCAAAAGACTAGTCCATTA+GGG | - | chr4.3:53621168-53621187 | None:intergenic | 40.0% |
| ! | CTTGACTGGCTATGGTTAAT+AGG | + | chr4.3:53623659-53623678 | MS.gene45320:intron | 40.0% |
| ! | GCACTCTTATTTAGTCGATG+TGG | - | chr4.3:53620884-53620903 | None:intergenic | 40.0% |
| ! | GGAGGGATTGGAACTTTTAT+TGG | + | chr4.3:53622194-53622213 | MS.gene45320:CDS | 40.0% |
| ! | GTTTTCACTTCTGCACCTAA+AGG | + | chr4.3:53623464-53623483 | MS.gene45320:CDS | 40.0% |
| !! | ATGGTGATTTGCTGGTTTCT+TGG | + | chr4.3:53620633-53620652 | MS.gene45320:CDS | 40.0% |
| !! | ATTTGCTGGTTTCTTGGCAT+TGG | + | chr4.3:53620639-53620658 | MS.gene45320:CDS | 40.0% |
| !! | GCCAGTTTTGTAAGTTGAGT+TGG | + | chr4.3:53621411-53621430 | MS.gene45320:intron | 40.0% |
| !! | TTTGCTGGTTTCTTGGCATT+GGG | + | chr4.3:53620640-53620659 | MS.gene45320:CDS | 40.0% |
| !!! | CCCTAATGGACTAGTCTTTT+GGG | + | chr4.3:53621165-53621184 | MS.gene45320:intron | 40.0% |
| !!! | GGATACACTGTCGTTTTCTT+TGG | + | chr4.3:53622040-53622059 | MS.gene45320:CDS | 40.0% |
| AAACGACAGTGTATCCGAAC+AGG | - | chr4.3:53622036-53622055 | None:intergenic | 45.0% | |
| AATAGCCCTTTCCTCTATGG+CGG | - | chr4.3:53621010-53621029 | None:intergenic | 45.0% | |
| ACATCTGGTAAAGGAGGGAT+TGG | + | chr4.3:53622182-53622201 | MS.gene45320:CDS | 45.0% | |
| AGAAAGGGTTACCTCTAGTC+TGG | + | chr4.3:53620946-53620965 | MS.gene45320:intron | 45.0% | |
| AGACCCACCTTGTAACCTTT+AGG | - | chr4.3:53623482-53623501 | None:intergenic | 45.0% | |
| AGACCTGTCTTACATGCTTC+CGG | + | chr4.3:53622280-53622299 | MS.gene45320:CDS | 45.0% | |
| AGTCGATGTGGGACTATAAC+AGG | - | chr4.3:53620872-53620891 | None:intergenic | 45.0% | |
| ATGGCAAAGAACAGAACTGC+AGG | - | chr4.3:53622707-53622726 | None:intergenic | 45.0% | |
| ATGTGCTTCTTTCCAGGACA+TGG | + | chr4.3:53622970-53622989 | MS.gene45320:intron | 45.0% | |
| CACCATTCCGCCTTGTATAT+GGG | - | chr4.3:53622258-53622277 | None:intergenic | 45.0% | |
| CATATACAAGGCGGAATGGT+GGG | + | chr4.3:53622257-53622276 | MS.gene45320:CDS | 45.0% | |
| CATGCTTCCGGAATTCATTC+AGG | + | chr4.3:53622292-53622311 | MS.gene45320:CDS | 45.0% | |
| CGATAGAGTGAAAACTGTCG+TGG | + | chr4.3:53621043-53621062 | MS.gene45320:intron | 45.0% | |
| CTATCTACCACTCTTAGTCC+TGG | + | chr4.3:53621307-53621326 | MS.gene45320:intron | 45.0% | |
| CTTCTTGGAGGTCTATTTGC+AGG | + | chr4.3:53623629-53623648 | MS.gene45320:CDS | 45.0% | |
| GAACGGTAGTACTTCACGAT+TGG | - | chr4.3:53622788-53622807 | None:intergenic | 45.0% | |
| GCACCTAAAGGTTACAAGGT+GGG | + | chr4.3:53623476-53623495 | MS.gene45320:intron | 45.0% | |
| GGGACCTGAACAAAATGCTT+TGG | + | chr4.3:53623586-53623605 | MS.gene45320:intron | 45.0% | |
| GTGTGTTGAGAGTCTCACAT+TGG | + | chr4.3:53621340-53621359 | MS.gene45320:intron | 45.0% | |
| GTGTTTGAGAATTCTCCTGG+TGG | + | chr4.3:53622464-53622483 | MS.gene45320:CDS | 45.0% | |
| GTTACAAGGTGGGTCTGTTA+AGG | + | chr4.3:53623486-53623505 | MS.gene45320:intron | 45.0% | |
| TCAGAAGATACCGGATCACA+CGG | + | chr4.3:53623112-53623131 | MS.gene45320:CDS | 45.0% | |
| TCTTGGAGGTCTATTTGCAG+GGG | + | chr4.3:53623631-53623650 | MS.gene45320:CDS | 45.0% | |
| TGCACCTAAAGGTTACAAGG+TGG | + | chr4.3:53623475-53623494 | MS.gene45320:intron | 45.0% | |
| TGCTGCTACAACCTTGACTA+AGG | - | chr4.3:53620764-53620783 | None:intergenic | 45.0% | |
| TGGCAAAGAACAGAACTGCA+GGG | - | chr4.3:53622706-53622725 | None:intergenic | 45.0% | |
| TGGTAAGTACCCTAGAAGGA+TGG | - | chr4.3:53621934-53621953 | None:intergenic | 45.0% | |
| TTCGCGGTGAAATAAAACGC+TGG | - | chr4.3:53623371-53623390 | None:intergenic | 45.0% | |
| ! | ATGCAGCAATGGTGATTTGC+TGG | + | chr4.3:53620625-53620644 | MS.gene45320:CDS | 45.0% |
| ! | ATTCCGGAAGCATGTAAGAC+AGG | - | chr4.3:53622286-53622305 | None:intergenic | 45.0% |
| ! | GTGGACCAACAGATTTTGTC+AGG | - | chr4.3:53621282-53621301 | None:intergenic | 45.0% |
| !! | TTGCTGGTTTCTTGGCATTG+GGG | + | chr4.3:53620641-53620660 | MS.gene45320:CDS | 45.0% |
| !!! | AACAGTTTTGGATCCTTCGG+AGG | - | chr4.3:53622819-53622838 | None:intergenic | 45.0% |
| !!! | CCCCTAATGGACTAGTCTTT+TGG | + | chr4.3:53621164-53621183 | MS.gene45320:intron | 45.0% |
| !!! | CCGCAGTCTTGTACTGATTT+TGG | - | chr4.3:53622011-53622030 | None:intergenic | 45.0% |
| AAACAGTACTCCGTTGGGTG+AGG | - | chr4.3:53622873-53622892 | None:intergenic | 50.0% | |
| ACAAGACTGCGGAACCTGTT+CGG | + | chr4.3:53622019-53622038 | MS.gene45320:CDS | 50.0% | |
| ACCGCGAAGTATGGTAAGCA+GGG | + | chr4.3:53623383-53623402 | MS.gene45320:CDS | 50.0% | |
| AGAGTGGTAGATAGCGTTCG+TGG | - | chr4.3:53621301-53621320 | None:intergenic | 50.0% | |
| AGTGAAAACTGTCGTGGACG+CGG | + | chr4.3:53621049-53621068 | MS.gene45320:intron | 50.0% | |
| CACTCTTAGTCCTGGGTATG+AGG | + | chr4.3:53621315-53621334 | MS.gene45320:intron | 50.0% | |
| CCACCATTCCGCCTTGTATA+TGG | - | chr4.3:53622259-53622278 | None:intergenic | 50.0% | |
| CCATATACAAGGCGGAATGG+TGG | + | chr4.3:53622256-53622275 | MS.gene45320:CDS | 50.0% | |
| CTCATACCCAGGACTAAGAG+TGG | - | chr4.3:53621317-53621336 | None:intergenic | 50.0% | |
| GATACCGGATCACACGGTTT+AGG | + | chr4.3:53623118-53623137 | MS.gene45320:CDS | 50.0% | |
| GCAGGGCAAATATGCAGCAA+TGG | + | chr4.3:53620614-53620633 | MS.gene45320:intron | 50.0% | |
| GCCGTGTTTGAGAATTCTCC+TGG | + | chr4.3:53622461-53622480 | MS.gene45320:CDS | 50.0% | |
| GCTGATGCCCATATACAAGG+CGG | + | chr4.3:53622248-53622267 | MS.gene45320:CDS | 50.0% | |
| GCTGTGCCCATCTCAAATTC+AGG | - | chr4.3:53620805-53620824 | None:intergenic | 50.0% | |
| GTCACTAGCGATGTGATCGT+AGG | + | chr4.3:53621857-53621876 | MS.gene45320:intron | 50.0% | |
| TCTTAGTCCTGGGTATGAGG+AGG | + | chr4.3:53621318-53621337 | MS.gene45320:intron | 50.0% | |
| TGAAGCCGCCATAGAGGAAA+GGG | + | chr4.3:53621002-53621021 | MS.gene45320:intron | 50.0% | |
| TGCCCATATACAAGGCGGAA+TGG | + | chr4.3:53622253-53622272 | MS.gene45320:CDS | 50.0% | |
| TTGCAGGGGTAACACTTGAC+TGG | + | chr4.3:53623645-53623664 | MS.gene45320:intron | 50.0% | |
| TTGGGTTACGCTCTCCTCAT+GGG | + | chr4.3:53621183-53621202 | MS.gene45320:intron | 50.0% | |
| TTGTTGCAGTCGTTCCTTGC+TGG | + | chr4.3:53622389-53622408 | MS.gene45320:intron | 50.0% | |
| ! | GGGTAACACTTGACTGGCTA+TGG | + | chr4.3:53623651-53623670 | MS.gene45320:intron | 50.0% |
| ! | TTTGGGTTACGCTCTCCTCA+TGG | + | chr4.3:53621182-53621201 | MS.gene45320:intron | 50.0% |
| !! | TGCTGGTTTCTTGGCATTGG+GGG | + | chr4.3:53620642-53620661 | MS.gene45320:CDS | 50.0% |
| ACACGGTTTAGGCACCTGGT+AGG | + | chr4.3:53623129-53623148 | MS.gene45320:intron | 55.0% | |
| ACAGCTGATCTTGCTGCAGC+TGG | + | chr4.3:53622839-53622858 | MS.gene45320:CDS | 55.0% | |
| CAACACACCTCCTCATACCC+AGG | - | chr4.3:53621328-53621347 | None:intergenic | 55.0% | |
| CACCGCGAAGTATGGTAAGC+AGG | + | chr4.3:53623382-53623401 | MS.gene45320:CDS | 55.0% | |
| CATGAGGCTCTACCCCCTAA+TGG | + | chr4.3:53621151-53621170 | MS.gene45320:intron | 55.0% | |
| CATTAGGGGGTAGAGCCTCA+TGG | - | chr4.3:53621153-53621172 | None:intergenic | 55.0% | |
| CGAAGTATGGTAAGCAGGGC+TGG | + | chr4.3:53623387-53623406 | MS.gene45320:CDS | 55.0% | |
| GATCACACGGTTTAGGCACC+TGG | + | chr4.3:53623125-53623144 | MS.gene45320:CDS | 55.0% | |
| GCCCTGCTTACCATACTTCG+CGG | - | chr4.3:53623387-53623406 | None:intergenic | 55.0% | |
| GGTATCCAGACCTCACCCAA+CGG | + | chr4.3:53622860-53622879 | MS.gene45320:CDS | 55.0% | |
| GGTGCCTAAACCGTGTGATC+CGG | - | chr4.3:53623125-53623144 | None:intergenic | 55.0% | |
| GTGAAGCCGCCATAGAGGAA+AGG | + | chr4.3:53621001-53621020 | MS.gene45320:intron | 55.0% | |
| TCGTGGACGCGGCTCTTAAA+GGG | + | chr4.3:53621060-53621079 | MS.gene45320:intron | 55.0% | |
| TCTCCTGGTGGTCTTCGCAA+AGG | + | chr4.3:53622476-53622495 | MS.gene45320:CDS | 55.0% | |
| TGAGACTCCACCACGTCTTG+AGG | + | chr4.3:53620529-53620548 | MS.gene45320:CDS | 55.0% | |
| ! | CTTCGGAGGCTGCTTTCGAA+CGG | - | chr4.3:53622805-53622824 | None:intergenic | 55.0% |
| ! | GCATTGGGGGTCTTTTCGCT+TGG | + | chr4.3:53620655-53620674 | MS.gene45320:CDS | 55.0% |
| CAGACGCTGCAGAACCAGCA+AGG | - | chr4.3:53622406-53622425 | None:intergenic | 60.0% | |
| CGTTCGAAAGCAGCCTCCGA+AGG | + | chr4.3:53622803-53622822 | MS.gene45320:CDS | 60.0% | |
| GCTCCTTTGCGAAGACCACC+AGG | - | chr4.3:53622482-53622501 | None:intergenic | 60.0% | |
| GGTGAGTGAAGCCGCCATAG+AGG | + | chr4.3:53620996-53621015 | MS.gene45320:intron | 60.0% | |
| GTACTCCGTTGGGTGAGGTC+TGG | - | chr4.3:53622868-53622887 | None:intergenic | 60.0% | |
| GTCGTGGACGCGGCTCTTAA+AGG | + | chr4.3:53621059-53621078 | MS.gene45320:intron | 60.0% | |
| !! | CTTGCTGGTTCTGCAGCGTC+TGG | + | chr4.3:53622404-53622423 | MS.gene45320:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 53620518 | 53623716 | 53620518 | ID=MS.gene45320 |
| chr4.3 | mRNA | 53620518 | 53623716 | 53620518 | ID=MS.gene45320.t1;Parent=MS.gene45320 |
| chr4.3 | exon | 53620518 | 53620550 | 53620518 | ID=MS.gene45320.t1.exon1;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53620518 | 53620550 | 53620518 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53620618 | 53620722 | 53620618 | ID=MS.gene45320.t1.exon2;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53620618 | 53620722 | 53620618 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53621926 | 53622081 | 53621926 | ID=MS.gene45320.t1.exon3;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53621926 | 53622081 | 53621926 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53622170 | 53622313 | 53622170 | ID=MS.gene45320.t1.exon4;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53622170 | 53622313 | 53622170 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53622398 | 53622503 | 53622398 | ID=MS.gene45320.t1.exon5;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53622398 | 53622503 | 53622398 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53622711 | 53622883 | 53622711 | ID=MS.gene45320.t1.exon6;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53622711 | 53622883 | 53622711 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53622986 | 53623146 | 53622986 | ID=MS.gene45320.t1.exon7;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53622986 | 53623146 | 53622986 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53623235 | 53623493 | 53623235 | ID=MS.gene45320.t1.exon8;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53623235 | 53623493 | 53623235 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53623587 | 53623652 | 53623587 | ID=MS.gene45320.t1.exon9;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53623587 | 53623652 | 53623587 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| chr4.3 | exon | 53623681 | 53623716 | 53623681 | ID=MS.gene45320.t1.exon10;Parent=MS.gene45320.t1 |
| chr4.3 | CDS | 53623681 | 53623716 | 53623681 | ID=cds.MS.gene45320.t1;Parent=MS.gene45320.t1 |
| Gene Sequence |
| Protein sequence |
