Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064214.t1 | XP_024631389.1 | 96.4 | 414 | 15 | 0 | 1 | 414 | 1 | 414 | 4.90E-223 | 783.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064214.t1 | Q9M0Y3 | 68.5 | 409 | 128 | 1 | 4 | 412 | 7 | 414 | 8.9e-157 | 554.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064214.t1 | A0A072V6W8 | 96.3 | 410 | 15 | 0 | 1 | 410 | 1 | 410 | 4.8e-220 | 773.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064214 | MS.gene51414 | PPI |
| MS.gene064214 | MS.gene029003 | PPI |
| MS.gene064214 | MS.gene043342 | PPI |
| MS.gene35750 | MS.gene064214 | PPI |
| MS.gene064214 | MS.gene046071 | PPI |
| MS.gene51416 | MS.gene064214 | PPI |
| MS.gene064214 | MS.gene064218 | PPI |
| MS.gene064214 | MS.gene31551 | PPI |
| MS.gene064214 | MS.gene45320 | PPI |
| MS.gene046074 | MS.gene064214 | PPI |
| MS.gene064214 | MS.gene046073 | PPI |
| MS.gene046071 | MS.gene064214 | PPI |
| MS.gene064217 | MS.gene064214 | PPI |
| MS.gene064218 | MS.gene064214 | PPI |
| MS.gene51411 | MS.gene064214 | PPI |
| MS.gene45318 | MS.gene064214 | PPI |
| MS.gene064214 | MS.gene45316 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064214.t1 | MTR_2g047968 | 96.341 | 410 | 15 | 0 | 1 | 410 | 1 | 410 | 0.0 | 801 |
| MS.gene064214.t1 | MTR_0008s0170 | 80.535 | 411 | 80 | 0 | 4 | 414 | 4 | 414 | 0.0 | 677 |
| MS.gene064214.t1 | MTR_0008s0130 | 76.585 | 410 | 96 | 0 | 5 | 414 | 5 | 414 | 0.0 | 646 |
| MS.gene064214.t1 | MTR_4g050990 | 77.295 | 414 | 94 | 0 | 1 | 414 | 1 | 414 | 0.0 | 644 |
| MS.gene064214.t1 | MTR_2g089520 | 77.295 | 414 | 94 | 0 | 1 | 414 | 1 | 414 | 0.0 | 644 |
| MS.gene064214.t1 | MTR_2g011600 | 70.098 | 408 | 120 | 1 | 7 | 412 | 14 | 421 | 0.0 | 580 |
| MS.gene064214.t1 | MTR_2g011580 | 68.063 | 382 | 117 | 2 | 34 | 412 | 1 | 380 | 0.0 | 522 |
| MS.gene064214.t1 | MTR_2g011600 | 67.935 | 368 | 116 | 1 | 47 | 412 | 3 | 370 | 2.44e-179 | 504 |
| MS.gene064214.t1 | MTR_1g071120 | 72.206 | 349 | 88 | 3 | 11 | 358 | 53 | 393 | 2.21e-177 | 501 |
| MS.gene064214.t1 | MTR_8g007285 | 58.516 | 364 | 147 | 2 | 52 | 412 | 2 | 364 | 3.16e-137 | 397 |
| MS.gene064214.t1 | MTR_0003s0470 | 33.253 | 415 | 237 | 12 | 11 | 410 | 26 | 415 | 2.39e-55 | 188 |
| MS.gene064214.t1 | MTR_3g462280 | 30.730 | 397 | 246 | 8 | 23 | 410 | 47 | 423 | 2.17e-45 | 162 |
| MS.gene064214.t1 | MTR_4g114710 | 29.040 | 427 | 247 | 14 | 4 | 410 | 8 | 398 | 4.52e-40 | 147 |
| MS.gene064214.t1 | MTR_2g011530 | 68.478 | 92 | 28 | 1 | 278 | 368 | 2 | 93 | 5.72e-36 | 127 |
| MS.gene064214.t1 | MTR_2g011540 | 49.630 | 135 | 61 | 1 | 52 | 179 | 2 | 136 | 5.21e-34 | 124 |
| MS.gene064214.t1 | MTR_2g011560 | 40.132 | 152 | 35 | 3 | 177 | 323 | 17 | 117 | 5.30e-18 | 80.1 |
| MS.gene064214.t1 | MTR_2g011570 | 55.385 | 65 | 22 | 1 | 137 | 201 | 1 | 58 | 3.91e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064214.t1 | AT4G05120 | 68.460 | 409 | 128 | 1 | 4 | 412 | 7 | 414 | 0.0 | 577 |
| MS.gene064214.t1 | AT4G05120 | 68.460 | 409 | 128 | 1 | 4 | 412 | 7 | 414 | 0.0 | 577 |
| MS.gene064214.t1 | AT4G05110 | 65.281 | 409 | 141 | 1 | 4 | 412 | 7 | 414 | 0.0 | 553 |
| MS.gene064214.t1 | AT4G05110 | 65.281 | 409 | 141 | 1 | 4 | 412 | 7 | 414 | 0.0 | 553 |
| MS.gene064214.t1 | AT4G05110 | 65.037 | 409 | 142 | 1 | 4 | 412 | 7 | 414 | 0.0 | 552 |
| MS.gene064214.t1 | AT4G05140 | 64.059 | 409 | 147 | 0 | 4 | 412 | 7 | 415 | 0.0 | 543 |
| MS.gene064214.t1 | AT4G05130 | 63.260 | 411 | 150 | 1 | 4 | 414 | 7 | 416 | 0.0 | 541 |
| MS.gene064214.t1 | AT3G09990 | 62.683 | 410 | 150 | 2 | 6 | 414 | 10 | 417 | 0.0 | 532 |
| MS.gene064214.t1 | AT1G61630 | 61.557 | 411 | 155 | 2 | 4 | 412 | 5 | 414 | 0.0 | 514 |
| MS.gene064214.t1 | AT1G70330 | 29.268 | 410 | 252 | 8 | 16 | 410 | 64 | 450 | 4.04e-50 | 176 |
| MS.gene064214.t1 | AT1G02630 | 29.187 | 418 | 254 | 10 | 1 | 410 | 6 | 389 | 2.45e-46 | 164 |
| MS.gene064214.t1 | AT1G02630 | 28.169 | 213 | 150 | 3 | 1 | 212 | 6 | 216 | 6.95e-24 | 102 |
Find 93 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCAGTCTTGTACTGATTT+TGG | 0.152135 | 4.2:-55917561 | None:intergenic |
| GTACTTCACGATTGGTAATT+TGG | 0.154465 | 4.2:-55918328 | None:intergenic |
| GTATATCAGCCATTTATATT+TGG | 0.187219 | 4.2:+55917509 | MS.gene064214:CDS |
| ATATTCTTGACATCATTCTT+AGG | 0.193217 | 4.2:+55918964 | MS.gene064214:CDS |
| TGCATAGTTAGTGGTGTATT+TGG | 0.235166 | 4.2:+55917774 | MS.gene064214:CDS |
| CTTCTTGGAGGTCTATTTGC+AGG | 0.236906 | 4.2:+55919179 | MS.gene064214:CDS |
| CCACCATTCCGCCTTGTATA+TGG | 0.254233 | 4.2:-55917809 | None:intergenic |
| ATTTGGAACACAAGCAATAT+TGG | 0.269430 | 4.2:+55917526 | MS.gene064214:CDS |
| CTTGACTGGCTATGGTTAAT+AGG | 0.280707 | 4.2:+55919209 | MS.gene064214:CDS |
| TTTGCTGGTTTCTTGGCATT+GGG | 0.292449 | 4.2:+55916122 | MS.gene064214:CDS |
| GCTTGTGTTCCAAATATAAA+TGG | 0.295680 | 4.2:-55917518 | None:intergenic |
| ATTTGCTGGTTTCTTGGCAT+TGG | 0.318253 | 4.2:+55916121 | MS.gene064214:CDS |
| TGCAGAAATACCATCCTTCT+AGG | 0.326458 | 4.2:+55917474 | MS.gene064214:intron |
| ATGCTGACCTGAATGAATTC+TGG | 0.330010 | 4.2:-55917852 | None:intergenic |
| TACTTCACGATTGGTAATTT+GGG | 0.335339 | 4.2:-55918327 | None:intergenic |
| TTGTTGCAGTCGTTCCTTGC+TGG | 0.335887 | 4.2:+55917942 | MS.gene064214:intron |
| AAGATCAGCTGTAACAGTTT+TGG | 0.342976 | 4.2:-55918379 | None:intergenic |
| CATGCTTCCAGAATTCATTC+AGG | 0.351097 | 4.2:+55917845 | MS.gene064214:CDS |
| TTACTATATTTACTTGTTCC+CGG | 0.355375 | 4.2:+55916183 | MS.gene064214:CDS |
| ACAATGTTAGCACATATATT+AGG | 0.355997 | 4.2:-55918620 | None:intergenic |
| ATGTTGATGCTGTGTCTTCT+TGG | 0.363115 | 4.2:+55919164 | MS.gene064214:CDS |
| ATGGTGATTTGCTGGTTTCT+TGG | 0.368089 | 4.2:+55916115 | MS.gene064214:CDS |
| GGGACCTGAACAAAATGCTT+TGG | 0.400480 | 4.2:+55919136 | MS.gene064214:intron |
| CTTGCTGGTTCTGCAGCGTC+TGG | 0.403809 | 4.2:+55917957 | MS.gene064214:CDS |
| AGACCCACCTTGTAACCTTT+AGG | 0.407785 | 4.2:-55919030 | None:intergenic |
| ATGCAGCAATGGTGATTTGC+TGG | 0.414070 | 4.2:+55916107 | MS.gene064214:CDS |
| CGAAGTATGGTAAGCAGGGC+TGG | 0.417664 | 4.2:+55918938 | MS.gene064214:CDS |
| ATTGGTATATGCATAGTTAG+TGG | 0.422297 | 4.2:+55917765 | MS.gene064214:CDS |
| CACCATTCCGCCTTGTATAT+GGG | 0.424233 | 4.2:-55917808 | None:intergenic |
| TATTCTTGACATCATTCTTA+GGG | 0.429143 | 4.2:+55918965 | MS.gene064214:CDS |
| GATACTGGATCACACACTTT+AGG | 0.429632 | 4.2:+55918669 | MS.gene064214:CDS |
| CATGGAAGATTCAAAACAAC+AGG | 0.436749 | 4.2:+55918539 | MS.gene064214:CDS |
| ACAGCTGATCTTGCTGCAGC+TGG | 0.441389 | 4.2:+55918390 | MS.gene064214:CDS |
| TTCTTGGAGGTCTATTTGCA+GGG | 0.442770 | 4.2:+55919180 | MS.gene064214:CDS |
| GGCTTCTTATCAGAAGATAC+TGG | 0.444567 | 4.2:+55918654 | MS.gene064214:CDS |
| GGACCTGAACAAAATGCTTT+GGG | 0.445382 | 4.2:+55919137 | MS.gene064214:CDS |
| CACTGCGAAGTATGGTAAGC+AGG | 0.446546 | 4.2:+55918933 | MS.gene064214:CDS |
| GTACTATGTCAGGTGAGGTC+TGG | 0.446753 | 4.2:-55918416 | None:intergenic |
| TAGTTGGATTTAGCAACATC+TGG | 0.457762 | 4.2:+55917720 | MS.gene064214:intron |
| ACAATGGTAAGCACCCTAGA+AGG | 0.465663 | 4.2:-55917488 | None:intergenic |
| GTATCTTCTGATAAGAAGCC+GGG | 0.471084 | 4.2:-55918651 | None:intergenic |
| ACATCTGGTAAAGGAGGGAT+TGG | 0.484610 | 4.2:+55917735 | MS.gene064214:CDS |
| AAAAGAAACAGTACTATGTC+AGG | 0.486807 | 4.2:-55918426 | None:intergenic |
| ACTCGTGAAAATCTTGAAGA+TGG | 0.489152 | 4.2:+55918846 | MS.gene064214:CDS |
| ACAAGACTGCGGAACCTGTT+CGG | 0.491522 | 4.2:+55917572 | MS.gene064214:CDS |
| AAACGACAGTGTATCCGAAC+AGG | 0.499026 | 4.2:-55917586 | None:intergenic |
| TTGATGCTGTGTCTTCTTGG+AGG | 0.504384 | 4.2:+55919167 | MS.gene064214:CDS |
| GCCGCGTTTGAGAATTCTCC+TGG | 0.506870 | 4.2:+55918014 | MS.gene064214:CDS |
| TGCTGGTTTCTTGGCATTGG+GGG | 0.514420 | 4.2:+55916124 | MS.gene064214:CDS |
| TTGCAGGGGTAACACTTGAC+TGG | 0.516302 | 4.2:+55919195 | MS.gene064214:CDS |
| TGGCTATGGTTAATAGGTAA+AGG | 0.519736 | 4.2:+55919215 | MS.gene064214:CDS |
| TTGCTGGTTTCTTGGCATTG+GGG | 0.520379 | 4.2:+55916123 | MS.gene064214:CDS |
| GAACGGTAGTACTTCACGAT+TGG | 0.521404 | 4.2:-55918336 | None:intergenic |
| TTCTGCACCTAAAGGTTACA+AGG | 0.528109 | 4.2:+55919023 | MS.gene064214:CDS |
| GATTTAGCAACATCTGGTAA+AGG | 0.531613 | 4.2:+55917726 | MS.gene064214:CDS |
| CATATACAAGGCGGAATGGT+GGG | 0.535308 | 4.2:+55917810 | MS.gene064214:CDS |
| GGGTAACACTTGACTGGCTA+TGG | 0.535952 | 4.2:+55919201 | MS.gene064214:CDS |
| AGTATCTTCTGATAAGAAGC+CGG | 0.542203 | 4.2:-55918652 | None:intergenic |
| GCTCCTTTGCGAAGACCACC+AGG | 0.551931 | 4.2:-55918032 | None:intergenic |
| ACAGATAGTGAGGTAACCAT+TGG | 0.553661 | 4.2:-55918992 | None:intergenic |
| TATGGTTAATAGGTAAAGGA+TGG | 0.554780 | 4.2:+55919219 | MS.gene064214:CDS |
| ATTCTGGAAGCATGTAAGAC+AGG | 0.563164 | 4.2:-55917836 | None:intergenic |
| AGCAATATTGGCTTACAATG+AGG | 0.563692 | 4.2:+55917538 | MS.gene064214:CDS |
| ATAGCTGATGCCCATATACA+AGG | 0.577441 | 4.2:+55917798 | MS.gene064214:CDS |
| TTAGCAACATCTGGTAAAGG+AGG | 0.580672 | 4.2:+55917729 | MS.gene064214:CDS |
| TGAGACTCCACCACGTCTTG+AGG | 0.583689 | 4.2:+55916011 | MS.gene064214:CDS |
| CGTTCAAAAGCAGCCTCCGA+AGG | 0.586283 | 4.2:+55918354 | MS.gene064214:CDS |
| TGCCCATATACAAGGCGGAA+TGG | 0.587617 | 4.2:+55917806 | MS.gene064214:CDS |
| TCATTCTTAGGGTTATCCAA+TGG | 0.594998 | 4.2:+55918976 | MS.gene064214:CDS |
| GCAGGGCAAATATGCAGCAA+TGG | 0.599931 | 4.2:+55916096 | MS.gene064214:intron |
| GCAGAAATACCATCCTTCTA+GGG | 0.600947 | 4.2:+55917475 | MS.gene064214:intron |
| CCATATACAAGGCGGAATGG+TGG | 0.604392 | 4.2:+55917809 | MS.gene064214:CDS |
| TCTTGGAGGTCTATTTGCAG+GGG | 0.607411 | 4.2:+55919181 | MS.gene064214:CDS |
| TCTCCTGGTGGTCTTCGCAA+AGG | 0.610206 | 4.2:+55918029 | MS.gene064214:CDS |
| TAGCAACATCTGGTAAAGGA+GGG | 0.612233 | 4.2:+55917730 | MS.gene064214:CDS |
| TATAAATGGCTGATATACAA+TGG | 0.614615 | 4.2:-55917504 | None:intergenic |
| ACTGCGAAGTATGGTAAGCA+GGG | 0.623428 | 4.2:+55918934 | MS.gene064214:CDS |
| AAGTGAAAACACAGATAGTG+AGG | 0.626913 | 4.2:-55919002 | None:intergenic |
| TGGTAAGCACCCTAGAAGGA+TGG | 0.634640 | 4.2:-55917484 | None:intergenic |
| GATCACACACTTTAGGCACC+TGG | 0.635020 | 4.2:+55918676 | MS.gene064214:CDS |
| CAGACGCTGCAGAACCAGCA+AGG | 0.638516 | 4.2:-55917956 | None:intergenic |
| TCAAAACAACAGGATCGCAA+AGG | 0.642728 | 4.2:+55918549 | MS.gene064214:CDS |
| AAACAGTACTATGTCAGGTG+AGG | 0.652969 | 4.2:-55918421 | None:intergenic |
| TTCGCAGTGAAATAAAACGC+TGG | 0.653094 | 4.2:-55918919 | None:intergenic |
| TATATTACCTCAAGACGTGG+TGG | 0.674673 | 4.2:-55916018 | None:intergenic |
| TATCTTCTGATAAGAAGCCG+GGG | 0.689994 | 4.2:-55918650 | None:intergenic |
| TGGAGTCTCACTGATGACCA+TGG | 0.695742 | 4.2:-55915998 | None:intergenic |
| GCGTTTGAGAATTCTCCTGG+TGG | 0.696893 | 4.2:+55918017 | MS.gene064214:CDS |
| ACCAGGAGAATTCTCAAACG+CGG | 0.707033 | 4.2:-55918015 | None:intergenic |
| TTATATATTACCTCAAGACG+TGG | 0.729092 | 4.2:-55916021 | None:intergenic |
| CCAAAATCAGTACAAGACTG+CGG | 0.733677 | 4.2:+55917561 | MS.gene064214:CDS |
| AAGATCAAACACATTAAACG+TGG | 0.738203 | 4.2:-55918806 | None:intergenic |
| GCTGATGCCCATATACAAGG+CGG | 0.752747 | 4.2:+55917801 | MS.gene064214:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAAAACTTTTATTCAA+AGG | - | chr4.2:55917440-55917459 | None:intergenic | 10.0% |
| !! | ATTGTAAAATCTTAAGATTT+GGG | - | chr4.2:55917011-55917030 | None:intergenic | 15.0% |
| !! | GATATCAAATTTAACAATAA+AGG | + | chr4.2:55917218-55917237 | MS.gene064214:intron | 15.0% |
| !! | TATTGTAAAATCTTAAGATT+TGG | - | chr4.2:55917012-55917031 | None:intergenic | 15.0% |
| !!! | AAAATTATTGAGTTTGTTAA+AGG | - | chr4.2:55917092-55917111 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAGGAAAAATGT+AGG | + | chr4.2:55917104-55917123 | MS.gene064214:intron | 15.0% |
| !!! | GTATGTTTTTTTATTTTGTA+GGG | + | chr4.2:55919116-55919135 | MS.gene064214:intron | 15.0% |
| !!! | TAACAAACTCAATAATTTTA+AGG | + | chr4.2:55917093-55917112 | MS.gene064214:intron | 15.0% |
| !!! | TAATTTTAAGGAAAAATGTA+GGG | + | chr4.2:55917105-55917124 | MS.gene064214:intron | 15.0% |
| !!! | TGTATGTTTTTTTATTTTGT+AGG | + | chr4.2:55919115-55919134 | MS.gene064214:intron | 15.0% |
| !! | ATATACACAATGTATAACAA+AGG | - | chr4.2:55918725-55918744 | None:intergenic | 20.0% |
| !! | ATGTTATCAAAATAACAATC+TGG | - | chr4.2:55917143-55917162 | None:intergenic | 20.0% |
| !! | ATTTGTTCATTTCAATTCTT+TGG | + | chr4.2:55916067-55916086 | MS.gene064214:intron | 20.0% |
| !! | TAAGTTTAACTCTTCAATAA+TGG | + | chr4.2:55918058-55918077 | MS.gene064214:intron | 20.0% |
| !! | TAATCTGAATCTTAACAATT+AGG | - | chr4.2:55918489-55918508 | None:intergenic | 20.0% |
| !! | TCAACATATACATTTGATAA+TGG | + | chr4.2:55917914-55917933 | MS.gene064214:intron | 20.0% |
| !! | TGAGAAAATAGATAAATTAC+CGG | - | chr4.2:55916205-55916224 | None:intergenic | 20.0% |
| !! | TGTTATCAAAATAACAATCT+GGG | - | chr4.2:55917142-55917161 | None:intergenic | 20.0% |
| !!! | ATAAATAAGAGTGTTTTATG+TGG | + | chr4.2:55916593-55916612 | MS.gene064214:intron | 20.0% |
| ! | AACATAAATGCATAATCTAG+AGG | - | chr4.2:55917672-55917691 | None:intergenic | 25.0% |
| ! | AAGCACTTAAAATTGAACTA+AGG | - | chr4.2:55917186-55917205 | None:intergenic | 25.0% |
| ! | AAGCTCAAAAAATGATGATA+TGG | - | chr4.2:55918277-55918296 | None:intergenic | 25.0% |
| ! | ACAATGTTAGCACATATATT+AGG | - | chr4.2:55918623-55918642 | None:intergenic | 25.0% |
| ! | ATAATGACAAATAATCACTG+TGG | - | chr4.2:55918210-55918229 | None:intergenic | 25.0% |
| ! | ATATTCTTGACATCATTCTT+AGG | + | chr4.2:55918964-55918983 | MS.gene064214:CDS | 25.0% |
| ! | CAATTGTAATTACTACTATG+AGG | + | chr4.2:55917877-55917896 | MS.gene064214:intron | 25.0% |
| ! | GAGAAAATAGATAAATTACC+GGG | - | chr4.2:55916204-55916223 | None:intergenic | 25.0% |
| ! | GTATATCAGCCATTTATATT+TGG | + | chr4.2:55917509-55917528 | MS.gene064214:CDS | 25.0% |
| ! | TAATGACAAATAATCACTGT+GGG | - | chr4.2:55918209-55918228 | None:intergenic | 25.0% |
| ! | TATAAATGGCTGATATACAA+TGG | - | chr4.2:55917507-55917526 | None:intergenic | 25.0% |
| ! | TATTCTTGACATCATTCTTA+GGG | + | chr4.2:55918965-55918984 | MS.gene064214:CDS | 25.0% |
| ! | TATTGAAGAGTTAAACTTAC+TGG | - | chr4.2:55918057-55918076 | None:intergenic | 25.0% |
| ! | TGTATACGCTATATAGTTTA+AGG | - | chr4.2:55918165-55918184 | None:intergenic | 25.0% |
| ! | TTACTATATTTACTTGTTCC+CGG | + | chr4.2:55916183-55916202 | MS.gene064214:CDS | 25.0% |
| ! | TTGATATTTCCATTTGTTTC+AGG | + | chr4.2:55918764-55918783 | MS.gene064214:intron | 25.0% |
| !! | AAAATAACAATCTGGGATAT+TGG | - | chr4.2:55917135-55917154 | None:intergenic | 25.0% |
| !! | TAAGCCAATTCTTTCAATTT+TGG | - | chr4.2:55917058-55917077 | None:intergenic | 25.0% |
| !!! | CATTTCAATTCTTTGGAATT+TGG | + | chr4.2:55916074-55916093 | MS.gene064214:intron | 25.0% |
| !!! | TAAGGAGCATAAACTTTTAA+GGG | + | chr4.2:55919055-55919074 | MS.gene064214:intron | 25.0% |
| !!! | TTAAGGAGCATAAACTTTTA+AGG | + | chr4.2:55919054-55919073 | MS.gene064214:intron | 25.0% |
| AAAAGAAACAGTACTATGTC+AGG | - | chr4.2:55918429-55918448 | None:intergenic | 30.0% | |
| AAAATCTTAAGATTTGGGCT+GGG | - | chr4.2:55917006-55917025 | None:intergenic | 30.0% | |
| AAAATGAATATGAACCTACC+AGG | - | chr4.2:55918697-55918716 | None:intergenic | 30.0% | |
| AAATTCTAACAGTTCCATGT+TGG | + | chr4.2:55916683-55916702 | MS.gene064214:intron | 30.0% | |
| AACTTACAAAACTGGATTCT+GGG | - | chr4.2:55916975-55916994 | None:intergenic | 30.0% | |
| AAGATCAAACACATTAAACG+TGG | - | chr4.2:55918809-55918828 | None:intergenic | 30.0% | |
| AAGTACACAAACAAATGAAC+AGG | - | chr4.2:55917644-55917663 | None:intergenic | 30.0% | |
| AATGTTCTGTTCAGAAAGTT+TGG | - | chr4.2:55917301-55917320 | None:intergenic | 30.0% | |
| ATATGTGATGATTTAAGAGC+TGG | + | chr4.2:55918741-55918760 | MS.gene064214:intron | 30.0% | |
| ATGTCCATGACAAATTGAAA+AGG | - | chr4.2:55918465-55918484 | None:intergenic | 30.0% | |
| ATTACTACTATGAGGTTCAA+AGG | + | chr4.2:55917885-55917904 | MS.gene064214:intron | 30.0% | |
| ATTGGTATATGCATAGTTAG+TGG | + | chr4.2:55917765-55917784 | MS.gene064214:CDS | 30.0% | |
| ATTTGATAGAAACACGAAAG+TGG | - | chr4.2:55916311-55916330 | None:intergenic | 30.0% | |
| CTGACCAAAATTGAAAGAAT+TGG | + | chr4.2:55917051-55917070 | MS.gene064214:intron | 30.0% | |
| GAGATATGACATGAAAATGT+GGG | + | chr4.2:55916906-55916925 | MS.gene064214:intron | 30.0% | |
| GCTTGTGTTCCAAATATAAA+TGG | - | chr4.2:55917521-55917540 | None:intergenic | 30.0% | |
| TAAAATCTTAAGATTTGGGC+TGG | - | chr4.2:55917007-55917026 | None:intergenic | 30.0% | |
| TACCTAAAAACGTGTTTACA+TGG | + | chr4.2:55916725-55916744 | MS.gene064214:intron | 30.0% | |
| TATGGTTAATAGGTAAAGGA+TGG | + | chr4.2:55919219-55919238 | MS.gene064214:CDS | 30.0% | |
| TATGTGGTATTTAAACCATG+AGG | + | chr4.2:55916609-55916628 | MS.gene064214:intron | 30.0% | |
| TGAGATATGACATGAAAATG+TGG | + | chr4.2:55916905-55916924 | MS.gene064214:intron | 30.0% | |
| TGTCCATGACAAATTGAAAA+GGG | - | chr4.2:55918464-55918483 | None:intergenic | 30.0% | |
| TTATATATTACCTCAAGACG+TGG | - | chr4.2:55916024-55916043 | None:intergenic | 30.0% | |
| TTTAGTTGAAACCTTAGTCA+AGG | + | chr4.2:55916232-55916251 | MS.gene064214:intron | 30.0% | |
| ! | ACACTCTTATTTATTCGATG+TGG | - | chr4.2:55916587-55916606 | None:intergenic | 30.0% |
| ! | ATTTGGAACACAAGCAATAT+TGG | + | chr4.2:55917526-55917545 | MS.gene064214:CDS | 30.0% |
| ! | CACTCTTATTTATTCGATGT+GGG | - | chr4.2:55916586-55916605 | None:intergenic | 30.0% |
| ! | TACTTCACGATTGGTAATTT+GGG | - | chr4.2:55918330-55918349 | None:intergenic | 30.0% |
| ! | TAGTTTCCTGAATTTGAGAT+GGG | + | chr4.2:55916278-55916297 | MS.gene064214:intron | 30.0% |
| !! | AAGGAGCATAAACTTTTAAG+GGG | + | chr4.2:55919056-55919075 | MS.gene064214:intron | 30.0% |
| !! | CAATAAAAGCACCAATTGTT+GGG | - | chr4.2:55916395-55916414 | None:intergenic | 30.0% |
| !! | TCAATAAAAGCACCAATTGT+TGG | - | chr4.2:55916396-55916415 | None:intergenic | 30.0% |
| !! | TTTTATTTCACTGCGAAGTA+TGG | + | chr4.2:55918925-55918944 | MS.gene064214:CDS | 30.0% |
| AAGTGAAAACACAGATAGTG+AGG | - | chr4.2:55919005-55919024 | None:intergenic | 35.0% | |
| ACTCGTGAAAATCTTGAAGA+TGG | + | chr4.2:55918846-55918865 | MS.gene064214:CDS | 35.0% | |
| AGTATCTTCTGATAAGAAGC+CGG | - | chr4.2:55918655-55918674 | None:intergenic | 35.0% | |
| AGTGCTTAAATCCCAACAAT+TGG | + | chr4.2:55916381-55916400 | MS.gene064214:intron | 35.0% | |
| ATACTCAGGACTAAGAGTAA+AGG | - | chr4.2:55916822-55916841 | None:intergenic | 35.0% | |
| CAACTTACAAAACTGGATTC+TGG | - | chr4.2:55916976-55916995 | None:intergenic | 35.0% | |
| CATGGAAGATTCAAAACAAC+AGG | + | chr4.2:55918539-55918558 | MS.gene064214:CDS | 35.0% | |
| CTAAAAACGTGTTTACATGG+TGG | + | chr4.2:55916728-55916747 | MS.gene064214:intron | 35.0% | |
| CTAGTTTCCTGAATTTGAGA+TGG | + | chr4.2:55916277-55916296 | MS.gene064214:intron | 35.0% | |
| CTCTTACTGACAAAATCTGT+TGG | + | chr4.2:55916771-55916790 | MS.gene064214:intron | 35.0% | |
| GATGTTGCTAAATCCAACTA+CGG | - | chr4.2:55917720-55917739 | None:intergenic | 35.0% | |
| GATTTAGCAACATCTGGTAA+AGG | + | chr4.2:55917726-55917745 | MS.gene064214:CDS | 35.0% | |
| TAACAGTTCCATGTTGGATT+TGG | + | chr4.2:55916689-55916708 | MS.gene064214:intron | 35.0% | |
| TAACTAATGTGCTTCTTTCC+AGG | + | chr4.2:55918515-55918534 | MS.gene064214:intron | 35.0% | |
| TAGTTGGATTTAGCAACATC+TGG | + | chr4.2:55917720-55917739 | MS.gene064214:intron | 35.0% | |
| TCATTCTTAGGGTTATCCAA+TGG | + | chr4.2:55918976-55918995 | MS.gene064214:CDS | 35.0% | |
| TGAGAGTTAGAACACAGAAA+GGG | + | chr4.2:55916413-55916432 | MS.gene064214:intron | 35.0% | |
| TGCATAGTTAGTGGTGTATT+TGG | + | chr4.2:55917774-55917793 | MS.gene064214:CDS | 35.0% | |
| TGGCTATGGTTAATAGGTAA+AGG | + | chr4.2:55919215-55919234 | MS.gene064214:CDS | 35.0% | |
| TGTTAGAATTTAAGCCCATG+AGG | - | chr4.2:55916674-55916693 | None:intergenic | 35.0% | |
| TTCTTCAAATCATACGCATC+TGG | + | chr4.2:55917375-55917394 | MS.gene064214:intron | 35.0% | |
| TTGAGAGTTAGAACACAGAA+AGG | + | chr4.2:55916412-55916431 | MS.gene064214:intron | 35.0% | |
| ! | AAGAGCATACCTGAAACAAA+TGG | - | chr4.2:55918776-55918795 | None:intergenic | 35.0% |
| ! | AAGATCAGCTGTAACAGTTT+TGG | - | chr4.2:55918382-55918401 | None:intergenic | 35.0% |
| ! | ATCTTCAAGATTTTCACGAG+TGG | - | chr4.2:55918847-55918866 | None:intergenic | 35.0% |
| ! | CACCATGTAAACACGTTTTT+AGG | - | chr4.2:55916730-55916749 | None:intergenic | 35.0% |
| ! | CACTCTTATTTAGTCGATGT+GGG | - | chr4.2:55916365-55916384 | None:intergenic | 35.0% |
| ! | CTAACATTGTCTATTTTCCC+CGG | + | chr4.2:55918633-55918652 | MS.gene064214:CDS | 35.0% |
| ! | GTACTTCACGATTGGTAATT+TGG | - | chr4.2:55918331-55918350 | None:intergenic | 35.0% |
| ! | TATTTCTGCACAAGGAAGAA+AGG | - | chr4.2:55917464-55917483 | None:intergenic | 35.0% |
| ! | TTAAAGGGCGTGAAAATGTT+AGG | + | chr4.2:55916557-55916576 | MS.gene064214:intron | 35.0% |
| !! | AGCAATATTGGCTTACAATG+AGG | + | chr4.2:55917538-55917557 | MS.gene064214:CDS | 35.0% |
| !! | CAATTCTTTGGAATTTGGCA+GGG | + | chr4.2:55916079-55916098 | MS.gene064214:intron | 35.0% |
| !! | CCAGTTTTGTAAGTTGAGTT+GGG | + | chr4.2:55916949-55916968 | MS.gene064214:intron | 35.0% |
| !! | TCAATTCTTTGGAATTTGGC+AGG | + | chr4.2:55916078-55916097 | MS.gene064214:intron | 35.0% |
| !! | TCCAGTTTTGTAAGTTGAGT+TGG | + | chr4.2:55916948-55916967 | MS.gene064214:intron | 35.0% |
| !! | TTTCCCAAAGCATTTTGTTC+AGG | - | chr4.2:55919143-55919162 | None:intergenic | 35.0% |
| !!! | ACCTAATGGACTAGTCTTTT+GGG | + | chr4.2:55916639-55916658 | MS.gene064214:intron | 35.0% |
| !!! | TGTAACAGTTTTGGATCCTT+CGG | - | chr4.2:55918373-55918392 | None:intergenic | 35.0% |
| !!! | TGTCGTTTTCTTTGGCATTT+TGG | + | chr4.2:55917601-55917620 | MS.gene064214:CDS | 35.0% |
| AAACAGTACTATGTCAGGTG+AGG | - | chr4.2:55918424-55918443 | None:intergenic | 40.0% | |
| AAGGACAACAGACACGAAAT+GGG | - | chr4.2:55918146-55918165 | None:intergenic | 40.0% | |
| ACAGATAGTGAGGTAACCAT+TGG | - | chr4.2:55918995-55919014 | None:intergenic | 40.0% | |
| AGAGTTTAGTCCTGAGTATG+AGG | + | chr4.2:55916856-55916875 | MS.gene064214:intron | 40.0% | |
| ATAGCTGATGCCCATATACA+AGG | + | chr4.2:55917798-55917817 | MS.gene064214:CDS | 40.0% | |
| ATGCTGACCTGAATGAATTC+TGG | - | chr4.2:55917855-55917874 | None:intergenic | 40.0% | |
| ATGTTGATGCTGTGTCTTCT+TGG | + | chr4.2:55919164-55919183 | MS.gene064214:CDS | 40.0% | |
| CACATCGCTAGTGACAATAT+CGG | - | chr4.2:55917405-55917424 | None:intergenic | 40.0% | |
| CATCCTTTCCAAATCCAACA+TGG | - | chr4.2:55916700-55916719 | None:intergenic | 40.0% | |
| CATGCTTCCAGAATTCATTC+AGG | + | chr4.2:55917845-55917864 | MS.gene064214:CDS | 40.0% | |
| CCAAAATCAGTACAAGACTG+CGG | + | chr4.2:55917561-55917580 | MS.gene064214:CDS | 40.0% | |
| CCCAACTCAACTTACAAAAC+TGG | - | chr4.2:55916952-55916971 | None:intergenic | 40.0% | |
| GACAAATTGAAAAGGGACGA+AGG | - | chr4.2:55918457-55918476 | None:intergenic | 40.0% | |
| GACTAAGAGTAAAGGATGAG+TGG | - | chr4.2:55916814-55916833 | None:intergenic | 40.0% | |
| GATACTGGATCACACACTTT+AGG | + | chr4.2:55918669-55918688 | MS.gene064214:CDS | 40.0% | |
| GCAGAAATACCATCCTTCTA+GGG | + | chr4.2:55917475-55917494 | MS.gene064214:intron | 40.0% | |
| GGACCTGAACAAAATGCTTT+GGG | + | chr4.2:55919137-55919156 | MS.gene064214:CDS | 40.0% | |
| GGCTTCTTATCAGAAGATAC+TGG | + | chr4.2:55918654-55918673 | MS.gene064214:CDS | 40.0% | |
| GTATCTTCTGATAAGAAGCC+GGG | - | chr4.2:55918654-55918673 | None:intergenic | 40.0% | |
| GTTCCATGTTGGATTTGGAA+AGG | + | chr4.2:55916694-55916713 | MS.gene064214:intron | 40.0% | |
| TAAGGACAACAGACACGAAA+TGG | - | chr4.2:55918147-55918166 | None:intergenic | 40.0% | |
| TACTCTTAGTCCTGAGTATG+AGG | + | chr4.2:55916823-55916842 | MS.gene064214:intron | 40.0% | |
| TAGCAACATCTGGTAAAGGA+GGG | + | chr4.2:55917730-55917749 | MS.gene064214:CDS | 40.0% | |
| TATATTACCTCAAGACGTGG+TGG | - | chr4.2:55916021-55916040 | None:intergenic | 40.0% | |
| TATCTTCTGATAAGAAGCCG+GGG | - | chr4.2:55918653-55918672 | None:intergenic | 40.0% | |
| TCAAAACAACAGGATCGCAA+AGG | + | chr4.2:55918549-55918568 | MS.gene064214:CDS | 40.0% | |
| TCCAACTACGGCAAGTAAAT+TGG | - | chr4.2:55917708-55917727 | None:intergenic | 40.0% | |
| TCCAATTTACTTGCCGTAGT+TGG | + | chr4.2:55917704-55917723 | MS.gene064214:intron | 40.0% | |
| TGCAGAAATACCATCCTTCT+AGG | + | chr4.2:55917474-55917493 | MS.gene064214:intron | 40.0% | |
| TTAGCAACATCTGGTAAAGG+AGG | + | chr4.2:55917729-55917748 | MS.gene064214:CDS | 40.0% | |
| TTCACCCACCTATCAGTATT+CGG | - | chr4.2:55916468-55916487 | None:intergenic | 40.0% | |
| TTCGCAGTGAAATAAAACGC+TGG | - | chr4.2:55918922-55918941 | None:intergenic | 40.0% | |
| TTCTGCACCTAAAGGTTACA+AGG | + | chr4.2:55919023-55919042 | MS.gene064214:CDS | 40.0% | |
| TTCTTGGAGGTCTATTTGCA+GGG | + | chr4.2:55919180-55919199 | MS.gene064214:CDS | 40.0% | |
| ! | AAGGATGGTATTTCTGCACA+AGG | - | chr4.2:55917472-55917491 | None:intergenic | 40.0% |
| ! | ACCCAAAAGACTAGTCCATT+AGG | - | chr4.2:55916643-55916662 | None:intergenic | 40.0% |
| ! | ATTCTGGAAGCATGTAAGAC+AGG | - | chr4.2:55917839-55917858 | None:intergenic | 40.0% |
| ! | CAAAAGACTAGTCCATTAGG+TGG | - | chr4.2:55916640-55916659 | None:intergenic | 40.0% |
| ! | CGTCCCTTTTCAATTTGTCA+TGG | + | chr4.2:55918458-55918477 | MS.gene064214:intron | 40.0% |
| ! | CTTGACTGGCTATGGTTAAT+AGG | + | chr4.2:55919209-55919228 | MS.gene064214:CDS | 40.0% |
| ! | GCACTCTTATTTAGTCGATG+TGG | - | chr4.2:55916366-55916385 | None:intergenic | 40.0% |
| ! | GGAGGGATTGGAACTTTTAT+TGG | + | chr4.2:55917747-55917766 | MS.gene064214:CDS | 40.0% |
| ! | GTTTACATGGTGGAAGACAA+TGG | + | chr4.2:55916738-55916757 | MS.gene064214:intron | 40.0% |
| ! | GTTTTCACTTCTGCACCTAA+AGG | + | chr4.2:55919015-55919034 | MS.gene064214:CDS | 40.0% |
| !! | ATGGTGATTTGCTGGTTTCT+TGG | + | chr4.2:55916115-55916134 | MS.gene064214:CDS | 40.0% |
| !! | ATTTGCTGGTTTCTTGGCAT+TGG | + | chr4.2:55916121-55916140 | MS.gene064214:CDS | 40.0% |
| !! | GTTTTGAATCTTCCATGTCC+TGG | - | chr4.2:55918536-55918555 | None:intergenic | 40.0% |
| !! | TTTGCTGGTTTCTTGGCATT+GGG | + | chr4.2:55916122-55916141 | MS.gene064214:CDS | 40.0% |
| !!! | AATGGACTAGTCTTTTGGGT+TGG | + | chr4.2:55916643-55916662 | MS.gene064214:intron | 40.0% |
| !!! | ATGGACTAGTCTTTTGGGTT+GGG | + | chr4.2:55916644-55916663 | MS.gene064214:intron | 40.0% |
| !!! | CACCTAATGGACTAGTCTTT+TGG | + | chr4.2:55916638-55916657 | MS.gene064214:intron | 40.0% |
| !!! | GGATACACTGTCGTTTTCTT+TGG | + | chr4.2:55917593-55917612 | MS.gene064214:CDS | 40.0% |
| AAACGACAGTGTATCCGAAC+AGG | - | chr4.2:55917589-55917608 | None:intergenic | 45.0% | |
| AACACCTTAACCCAGACTAG+AGG | - | chr4.2:55916442-55916461 | None:intergenic | 45.0% | |
| AATGGTAGCCCTTTCCTCTA+TGG | - | chr4.2:55916495-55916514 | None:intergenic | 45.0% | |
| ACAATGGTAAGCACCCTAGA+AGG | - | chr4.2:55917491-55917510 | None:intergenic | 45.0% | |
| ACATCTGGTAAAGGAGGGAT+TGG | + | chr4.2:55917735-55917754 | MS.gene064214:CDS | 45.0% | |
| ACCAGGAGAATTCTCAAACG+CGG | - | chr4.2:55918018-55918037 | None:intergenic | 45.0% | |
| ACTGCGAAGTATGGTAAGCA+GGG | + | chr4.2:55918934-55918953 | MS.gene064214:CDS | 45.0% | |
| AGAAAGGGTTACCTCTAGTC+TGG | + | chr4.2:55916428-55916447 | MS.gene064214:intron | 45.0% | |
| AGACCCACCTTGTAACCTTT+AGG | - | chr4.2:55919033-55919052 | None:intergenic | 45.0% | |
| AGTCGATGTGGGACTATAAC+AGG | - | chr4.2:55916354-55916373 | None:intergenic | 45.0% | |
| ATAGAGGAAAGGGCTACCAT+TGG | + | chr4.2:55916494-55916513 | MS.gene064214:intron | 45.0% | |
| ATGGCAAAGAACAGAACTGC+AGG | - | chr4.2:55918258-55918277 | None:intergenic | 45.0% | |
| ATGTGCTTCTTTCCAGGACA+TGG | + | chr4.2:55918521-55918540 | MS.gene064214:intron | 45.0% | |
| CACCATTCCGCCTTGTATAT+GGG | - | chr4.2:55917811-55917830 | None:intergenic | 45.0% | |
| CATATACAAGGCGGAATGGT+GGG | + | chr4.2:55917810-55917829 | MS.gene064214:CDS | 45.0% | |
| CTTCTTGGAGGTCTATTTGC+AGG | + | chr4.2:55919179-55919198 | MS.gene064214:CDS | 45.0% | |
| GAAAGGGTTACCTCTAGTCT+GGG | + | chr4.2:55916429-55916448 | MS.gene064214:intron | 45.0% | |
| GAACGGTAGTACTTCACGAT+TGG | - | chr4.2:55918339-55918358 | None:intergenic | 45.0% | |
| GCACCTAAAGGTTACAAGGT+GGG | + | chr4.2:55919027-55919046 | MS.gene064214:intron | 45.0% | |
| GGGACCTGAACAAAATGCTT+TGG | + | chr4.2:55919136-55919155 | MS.gene064214:intron | 45.0% | |
| GTGTTCCACCGAATACTGAT+AGG | + | chr4.2:55916457-55916476 | MS.gene064214:intron | 45.0% | |
| GTTACAAGGTGGGTCTGTTA+AGG | + | chr4.2:55919037-55919056 | MS.gene064214:intron | 45.0% | |
| GTTACCTCTAGTCTGGGTTA+AGG | + | chr4.2:55916435-55916454 | MS.gene064214:intron | 45.0% | |
| GTTTAGTCCTGAGTATGAGG+AGG | + | chr4.2:55916859-55916878 | MS.gene064214:intron | 45.0% | |
| TAGAGGAAAGGGCTACCATT+GGG | + | chr4.2:55916495-55916514 | MS.gene064214:intron | 45.0% | |
| TCCACCGAATACTGATAGGT+GGG | + | chr4.2:55916461-55916480 | MS.gene064214:intron | 45.0% | |
| TCTTAGTCCTGAGTATGAGG+AGG | + | chr4.2:55916826-55916845 | MS.gene064214:intron | 45.0% | |
| TCTTGGAGGTCTATTTGCAG+GGG | + | chr4.2:55919181-55919200 | MS.gene064214:CDS | 45.0% | |
| TGCACCTAAAGGTTACAAGG+TGG | + | chr4.2:55919026-55919045 | MS.gene064214:intron | 45.0% | |
| TGCTGCTACAACCTTGACTA+AGG | - | chr4.2:55916246-55916265 | None:intergenic | 45.0% | |
| TGGCAAAGAACAGAACTGCA+GGG | - | chr4.2:55918257-55918276 | None:intergenic | 45.0% | |
| TTCCACCGAATACTGATAGG+TGG | + | chr4.2:55916460-55916479 | MS.gene064214:intron | 45.0% | |
| TTGATGCTGTGTCTTCTTGG+AGG | + | chr4.2:55919167-55919186 | MS.gene064214:CDS | 45.0% | |
| ! | ATGCAGCAATGGTGATTTGC+TGG | + | chr4.2:55916107-55916126 | MS.gene064214:CDS | 45.0% |
| ! | CACGACGGTTTTCACTCTAT+CGG | - | chr4.2:55916527-55916546 | None:intergenic | 45.0% |
| ! | TACATGGTGGAAGACAATGG+TGG | + | chr4.2:55916741-55916760 | MS.gene064214:intron | 45.0% |
| !! | TTGCTGGTTTCTTGGCATTG+GGG | + | chr4.2:55916123-55916142 | MS.gene064214:CDS | 45.0% |
| !!! | AACAGTTTTGGATCCTTCGG+AGG | - | chr4.2:55918370-55918389 | None:intergenic | 45.0% |
| !!! | CCGCAGTCTTGTACTGATTT+TGG | - | chr4.2:55917564-55917583 | None:intergenic | 45.0% |
| ACAAGACTGCGGAACCTGTT+CGG | + | chr4.2:55917572-55917591 | MS.gene064214:CDS | 50.0% | |
| ACACACTTTAGGCACCTGGT+AGG | + | chr4.2:55918680-55918699 | MS.gene064214:intron | 50.0% | |
| ACCCACCTATCAGTATTCGG+TGG | - | chr4.2:55916465-55916484 | None:intergenic | 50.0% | |
| CAACACACCTCCTCATACTC+AGG | - | chr4.2:55916836-55916855 | None:intergenic | 50.0% | |
| CACTGCGAAGTATGGTAAGC+AGG | + | chr4.2:55918933-55918952 | MS.gene064214:CDS | 50.0% | |
| CCACCATTCCGCCTTGTATA+TGG | - | chr4.2:55917812-55917831 | None:intergenic | 50.0% | |
| CCATATACAAGGCGGAATGG+TGG | + | chr4.2:55917809-55917828 | MS.gene064214:CDS | 50.0% | |
| CGATAGAGTGAAAACCGTCG+TGG | + | chr4.2:55916525-55916544 | MS.gene064214:intron | 50.0% | |
| GATCACACACTTTAGGCACC+TGG | + | chr4.2:55918676-55918695 | MS.gene064214:CDS | 50.0% | |
| GCAGGGCAAATATGCAGCAA+TGG | + | chr4.2:55916096-55916115 | MS.gene064214:intron | 50.0% | |
| GCGTTTGAGAATTCTCCTGG+TGG | + | chr4.2:55918017-55918036 | MS.gene064214:CDS | 50.0% | |
| GCTGATGCCCATATACAAGG+CGG | + | chr4.2:55917801-55917820 | MS.gene064214:CDS | 50.0% | |
| GCTGTGCCCATCTCAAATTC+AGG | - | chr4.2:55916287-55916306 | None:intergenic | 50.0% | |
| GTACTATGTCAGGTGAGGTC+TGG | - | chr4.2:55918419-55918438 | None:intergenic | 50.0% | |
| GTCACTAGCGATGTGATCGT+AGG | + | chr4.2:55917410-55917429 | MS.gene064214:intron | 50.0% | |
| TGAAGCCGCCATAGAGGAAA+GGG | + | chr4.2:55916484-55916503 | MS.gene064214:intron | 50.0% | |
| TGAGTGGTAGATAGCGTTCG+TGG | - | chr4.2:55916798-55916817 | None:intergenic | 50.0% | |
| TGCCCATATACAAGGCGGAA+TGG | + | chr4.2:55917806-55917825 | MS.gene064214:CDS | 50.0% | |
| TGGTAAGCACCCTAGAAGGA+TGG | - | chr4.2:55917487-55917506 | None:intergenic | 50.0% | |
| TTGCAGGGGTAACACTTGAC+TGG | + | chr4.2:55919195-55919214 | MS.gene064214:CDS | 50.0% | |
| TTGTTGCAGTCGTTCCTTGC+TGG | + | chr4.2:55917942-55917961 | MS.gene064214:intron | 50.0% | |
| ! | GGGTAACACTTGACTGGCTA+TGG | + | chr4.2:55919201-55919220 | MS.gene064214:CDS | 50.0% |
| !! | TGCTGGTTTCTTGGCATTGG+GGG | + | chr4.2:55916124-55916143 | MS.gene064214:CDS | 50.0% |
| !!! | CTTCGGAGGCTGCTTTTGAA+CGG | - | chr4.2:55918356-55918375 | None:intergenic | 50.0% |
| ACAGCTGATCTTGCTGCAGC+TGG | + | chr4.2:55918390-55918409 | MS.gene064214:CDS | 55.0% | |
| AGTGAAAACCGTCGTGGACG+CGG | + | chr4.2:55916531-55916550 | MS.gene064214:intron | 55.0% | |
| CATGAGGCTCTGCCACCTAA+TGG | + | chr4.2:55916625-55916644 | MS.gene064214:intron | 55.0% | |
| CATTAGGTGGCAGAGCCTCA+TGG | - | chr4.2:55916627-55916646 | None:intergenic | 55.0% | |
| CGAAGTATGGTAAGCAGGGC+TGG | + | chr4.2:55918938-55918957 | MS.gene064214:CDS | 55.0% | |
| CGTTCAAAAGCAGCCTCCGA+AGG | + | chr4.2:55918354-55918373 | MS.gene064214:CDS | 55.0% | |
| GCCGCGTTTGAGAATTCTCC+TGG | + | chr4.2:55918014-55918033 | MS.gene064214:CDS | 55.0% | |
| GGTAGCCCTTTCCTCTATGG+CGG | - | chr4.2:55916492-55916511 | None:intergenic | 55.0% | |
| GTGAAGCCGCCATAGAGGAA+AGG | + | chr4.2:55916483-55916502 | MS.gene064214:intron | 55.0% | |
| TCGTGGACGCGGCTCTTAAA+GGG | + | chr4.2:55916542-55916561 | MS.gene064214:intron | 55.0% | |
| TCTCCTGGTGGTCTTCGCAA+AGG | + | chr4.2:55918029-55918048 | MS.gene064214:CDS | 55.0% | |
| TGAGACTCCACCACGTCTTG+AGG | + | chr4.2:55916011-55916030 | MS.gene064214:CDS | 55.0% | |
| TTTAAGAGCCGCGTCCACGA+CGG | - | chr4.2:55916542-55916561 | None:intergenic | 55.0% | |
| ! | GCATTGGGGGTCTTTTCGCT+TGG | + | chr4.2:55916137-55916156 | MS.gene064214:CDS | 55.0% |
| !! | CTCTATCGGCACTGACCCAA+TGG | - | chr4.2:55916513-55916532 | None:intergenic | 55.0% |
| !! | TTGGGTTGGGCTGTCCTCAT+GGG | + | chr4.2:55916657-55916676 | MS.gene064214:intron | 55.0% |
| !! | TTTGGGTTGGGCTGTCCTCA+TGG | + | chr4.2:55916656-55916675 | MS.gene064214:intron | 55.0% |
| CAGACGCTGCAGAACCAGCA+AGG | - | chr4.2:55917959-55917978 | None:intergenic | 60.0% | |
| GCTCCTTTGCGAAGACCACC+AGG | - | chr4.2:55918035-55918054 | None:intergenic | 60.0% | |
| GTCGTGGACGCGGCTCTTAA+AGG | + | chr4.2:55916541-55916560 | MS.gene064214:intron | 60.0% | |
| !! | CTTGCTGGTTCTGCAGCGTC+TGG | + | chr4.2:55917957-55917976 | MS.gene064214:CDS | 60.0% |
| GGTGGGTGAAGCCGCCATAG+AGG | + | chr4.2:55916478-55916497 | MS.gene064214:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 55916000 | 55919244 | 55916000 | ID=MS.gene064214 |
| chr4.2 | mRNA | 55916000 | 55919244 | 55916000 | ID=MS.gene064214.t1;Parent=MS.gene064214 |
| chr4.2 | exon | 55916000 | 55916032 | 55916000 | ID=MS.gene064214.t1.exon1;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55916000 | 55916032 | 55916000 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| chr4.2 | exon | 55916100 | 55916204 | 55916100 | ID=MS.gene064214.t1.exon2;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55916100 | 55916204 | 55916100 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| chr4.2 | exon | 55917479 | 55917634 | 55917479 | ID=MS.gene064214.t1.exon3;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55917479 | 55917634 | 55917479 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| chr4.2 | exon | 55917723 | 55917866 | 55917723 | ID=MS.gene064214.t1.exon4;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55917723 | 55917866 | 55917723 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| chr4.2 | exon | 55917951 | 55918056 | 55917951 | ID=MS.gene064214.t1.exon5;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55917951 | 55918056 | 55917951 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| chr4.2 | exon | 55918262 | 55918434 | 55918262 | ID=MS.gene064214.t1.exon6;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55918262 | 55918434 | 55918262 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| chr4.2 | exon | 55918537 | 55918697 | 55918537 | ID=MS.gene064214.t1.exon7;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55918537 | 55918697 | 55918537 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| chr4.2 | exon | 55918786 | 55919044 | 55918786 | ID=MS.gene064214.t1.exon8;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55918786 | 55919044 | 55918786 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| chr4.2 | exon | 55919137 | 55919244 | 55919137 | ID=MS.gene064214.t1.exon9;Parent=MS.gene064214.t1 |
| chr4.2 | CDS | 55919137 | 55919244 | 55919137 | ID=cds.MS.gene064214.t1;Parent=MS.gene064214.t1 |
| Gene Sequence |
| Protein sequence |
