Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31551.t1 | XP_003597087.1 | 98.1 | 414 | 8 | 0 | 1 | 414 | 1 | 414 | 2.90E-231 | 810.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31551.t1 | Q9M0Y3 | 71.6 | 408 | 115 | 1 | 5 | 412 | 8 | 414 | 3.5e-169 | 595.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31551.t1 | G7IRM9 | 98.1 | 414 | 8 | 0 | 1 | 414 | 1 | 414 | 2.1e-231 | 810.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene31551 | 0.829102 | 6.21E-55 | -1.69E-46 |
| MS.gene049264 | MS.gene31551 | 0.831805 | 1.36E-55 | -1.69E-46 |
| MS.gene049283 | MS.gene31551 | 0.804772 | 1.84E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene31551 | 0.803356 | 3.62E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene31551 | 0.810181 | 1.31E-50 | -1.69E-46 |
| MS.gene051832 | MS.gene31551 | 0.819555 | 1.09E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene31551 | 0.804455 | 2.14E-49 | -1.69E-46 |
| MS.gene052464 | MS.gene31551 | 0.803773 | 2.97E-49 | -1.69E-46 |
| MS.gene052493 | MS.gene31551 | 0.83855 | 2.69E-57 | -1.69E-46 |
| MS.gene052674 | MS.gene31551 | 0.820196 | 7.79E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene31551 | 0.813991 | 1.93E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene31551 | 0.817958 | 2.52E-52 | -1.69E-46 |
| MS.gene052685 | MS.gene31551 | 0.801426 | 9.06E-49 | -1.69E-46 |
| MS.gene052686 | MS.gene31551 | 0.818444 | 1.95E-52 | -1.69E-46 |
| MS.gene053094 | MS.gene31551 | 0.819603 | 1.07E-52 | -1.69E-46 |
| MS.gene053963 | MS.gene31551 | 0.829188 | 5.92E-55 | -1.69E-46 |
| MS.gene05410 | MS.gene31551 | 0.824976 | 6.03E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene31551 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene054222 | MS.gene31551 | 0.8535 | 2.29E-61 | -1.69E-46 |
| MS.gene05439 | MS.gene31551 | 0.800113 | 1.68E-48 | -1.69E-46 |
| MS.gene054479 | MS.gene31551 | 0.825482 | 4.58E-54 | -1.69E-46 |
| MS.gene054489 | MS.gene31551 | 0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene31551 | 0.843129 | 1.69E-58 | -1.69E-46 |
| MS.gene054892 | MS.gene31551 | 0.837339 | 5.51E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene31551 | 0.835858 | 1.31E-56 | -1.69E-46 |
| MS.gene055141 | MS.gene31551 | 0.812073 | 5.09E-51 | -1.69E-46 |
| MS.gene055149 | MS.gene31551 | 0.808648 | 2.79E-50 | -1.69E-46 |
| MS.gene055226 | MS.gene31551 | 0.816981 | 4.18E-52 | -1.69E-46 |
| MS.gene055231 | MS.gene31551 | 0.816958 | 4.23E-52 | -1.69E-46 |
| MS.gene055724 | MS.gene31551 | 0.803335 | 3.66E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene31551 | 0.828311 | 9.65E-55 | -1.69E-46 |
| MS.gene056677 | MS.gene31551 | 0.817967 | 2.51E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene31551 | 0.815438 | 9.24E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene31551 | 0.810851 | 9.38E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene31551 | 0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene31551 | 0.808367 | 3.21E-50 | -1.69E-46 |
| MS.gene058159 | MS.gene31551 | 0.808011 | 3.82E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene31551 | -0.80252 | 5.40E-49 | -1.69E-46 |
| MS.gene058279 | MS.gene31551 | 0.82435 | 8.46E-54 | -1.69E-46 |
| MS.gene058289 | MS.gene31551 | 0.817928 | 2.56E-52 | -1.69E-46 |
| MS.gene059170 | MS.gene31551 | 0.81534 | 9.72E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene31551 | 0.823069 | 1.69E-53 | -1.69E-46 |
| MS.gene059774 | MS.gene31551 | 0.833851 | 4.20E-56 | -1.69E-46 |
| MS.gene060012 | MS.gene31551 | 0.836008 | 1.20E-56 | -1.69E-46 |
| MS.gene060167 | MS.gene31551 | 0.801382 | 9.24E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene31551 | 0.855813 | 4.90E-62 | -1.69E-46 |
| MS.gene060412 | MS.gene31551 | 0.820712 | 5.93E-53 | -1.69E-46 |
| MS.gene060520 | MS.gene31551 | 0.824746 | 6.83E-54 | -1.69E-46 |
| MS.gene060697 | MS.gene31551 | 0.833399 | 5.45E-56 | -1.69E-46 |
| MS.gene060777 | MS.gene31551 | 0.819821 | 9.50E-53 | -1.69E-46 |
| MS.gene060785 | MS.gene31551 | 0.806827 | 6.81E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene31551 | 0.84268 | 2.23E-58 | -1.69E-46 |
| MS.gene060932 | MS.gene31551 | 0.828089 | 1.09E-54 | -1.69E-46 |
| MS.gene06121 | MS.gene31551 | 0.8254 | 4.78E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51411 | MS.gene31551 | PPI |
| MS.gene31551 | MS.gene029003 | PPI |
| MS.gene31551 | MS.gene046073 | PPI |
| MS.gene064214 | MS.gene31551 | PPI |
| MS.gene35750 | MS.gene31551 | PPI |
| MS.gene51416 | MS.gene31551 | PPI |
| MS.gene046074 | MS.gene31551 | PPI |
| MS.gene046071 | MS.gene31551 | PPI |
| MS.gene064217 | MS.gene31551 | PPI |
| MS.gene45316 | MS.gene31551 | PPI |
| MS.gene31551 | MS.gene45316 | PPI |
| MS.gene31551 | MS.gene043342 | PPI |
| MS.gene45318 | MS.gene31551 | PPI |
| MS.gene31551 | MS.gene51414 | PPI |
| MS.gene064218 | MS.gene31551 | PPI |
| MS.gene31551 | MS.gene45320 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31551.t1 | MTR_4g050990 | 98.068 | 414 | 8 | 0 | 1 | 414 | 1 | 414 | 0.0 | 827 |
| MS.gene31551.t1 | MTR_2g089520 | 98.068 | 414 | 8 | 0 | 1 | 414 | 1 | 414 | 0.0 | 827 |
| MS.gene31551.t1 | MTR_0008s0170 | 82.609 | 414 | 72 | 0 | 1 | 414 | 1 | 414 | 0.0 | 704 |
| MS.gene31551.t1 | MTR_0008s0130 | 76.812 | 414 | 96 | 0 | 1 | 414 | 1 | 414 | 0.0 | 665 |
| MS.gene31551.t1 | MTR_2g047968 | 77.317 | 410 | 93 | 0 | 1 | 410 | 1 | 410 | 0.0 | 631 |
| MS.gene31551.t1 | MTR_2g011600 | 70.098 | 408 | 120 | 2 | 7 | 412 | 14 | 421 | 0.0 | 583 |
| MS.gene31551.t1 | MTR_2g011580 | 70.789 | 380 | 110 | 1 | 34 | 412 | 1 | 380 | 0.0 | 550 |
| MS.gene31551.t1 | MTR_2g011600 | 69.421 | 363 | 109 | 2 | 52 | 412 | 8 | 370 | 0.0 | 513 |
| MS.gene31551.t1 | MTR_1g071120 | 71.347 | 349 | 91 | 3 | 11 | 358 | 53 | 393 | 3.73e-177 | 501 |
| MS.gene31551.t1 | MTR_8g007285 | 61.157 | 363 | 139 | 1 | 52 | 412 | 2 | 364 | 8.26e-148 | 424 |
| MS.gene31551.t1 | MTR_0003s0470 | 32.289 | 415 | 241 | 12 | 11 | 410 | 26 | 415 | 3.12e-54 | 186 |
| MS.gene31551.t1 | MTR_3g462280 | 30.673 | 401 | 251 | 7 | 18 | 410 | 42 | 423 | 1.04e-45 | 163 |
| MS.gene31551.t1 | MTR_4g114710 | 29.176 | 425 | 254 | 11 | 1 | 410 | 6 | 398 | 8.85e-42 | 152 |
| MS.gene31551.t1 | MTR_2g011530 | 71.739 | 92 | 25 | 1 | 278 | 368 | 2 | 93 | 1.19e-37 | 132 |
| MS.gene31551.t1 | MTR_2g011540 | 51.111 | 135 | 59 | 1 | 52 | 179 | 2 | 136 | 3.84e-37 | 132 |
| MS.gene31551.t1 | MTR_2g011560 | 38.060 | 134 | 32 | 2 | 177 | 310 | 17 | 99 | 3.79e-17 | 77.4 |
| MS.gene31551.t1 | MTR_2g011570 | 55.385 | 65 | 22 | 1 | 137 | 201 | 1 | 58 | 1.65e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31551.t1 | AT4G05120 | 71.569 | 408 | 115 | 1 | 5 | 412 | 8 | 414 | 0.0 | 613 |
| MS.gene31551.t1 | AT4G05120 | 71.569 | 408 | 115 | 1 | 5 | 412 | 8 | 414 | 0.0 | 613 |
| MS.gene31551.t1 | AT4G05110 | 67.892 | 408 | 130 | 1 | 5 | 412 | 8 | 414 | 0.0 | 581 |
| MS.gene31551.t1 | AT4G05110 | 67.892 | 408 | 130 | 1 | 5 | 412 | 8 | 414 | 0.0 | 581 |
| MS.gene31551.t1 | AT4G05110 | 67.647 | 408 | 131 | 1 | 5 | 412 | 8 | 414 | 0.0 | 580 |
| MS.gene31551.t1 | AT4G05140 | 67.157 | 408 | 134 | 0 | 5 | 412 | 8 | 415 | 0.0 | 576 |
| MS.gene31551.t1 | AT4G05130 | 64.964 | 411 | 141 | 2 | 5 | 414 | 8 | 416 | 0.0 | 557 |
| MS.gene31551.t1 | AT3G09990 | 64.461 | 408 | 144 | 1 | 8 | 414 | 10 | 417 | 0.0 | 542 |
| MS.gene31551.t1 | AT1G61630 | 61.483 | 418 | 151 | 3 | 1 | 412 | 1 | 414 | 0.0 | 512 |
| MS.gene31551.t1 | AT1G70330 | 31.477 | 413 | 239 | 8 | 16 | 410 | 64 | 450 | 8.04e-51 | 177 |
| MS.gene31551.t1 | AT1G02630 | 29.298 | 413 | 252 | 9 | 5 | 410 | 10 | 389 | 7.61e-49 | 171 |
| MS.gene31551.t1 | AT1G02630 | 28.708 | 209 | 146 | 3 | 5 | 212 | 10 | 216 | 1.55e-24 | 103 |
Find 90 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTTGAAATTCTTGAAAT+TGG | 0.116609 | 2.4:-11391008 | MS.gene31551:CDS |
| GTGCATTAACCTCTGCTTTA+AGG | 0.117350 | 2.4:-11391923 | MS.gene31551:CDS |
| TTACTACATTTACTTGTTTC+CGG | 0.228601 | 2.4:-11393217 | MS.gene31551:intron |
| GAAAGAAATAGTACTTCTTT+AGG | 0.270591 | 2.4:+11391500 | None:intergenic |
| AGCAGCATTTGATAATTCTA+AGG | 0.310431 | 2.4:-11391889 | MS.gene31551:CDS |
| GGGAAAATATGCTGCAATAT+TGG | 0.315284 | 2.4:-11393301 | MS.gene31551:CDS |
| GATAATGTTGACATCATTCT+TGG | 0.317000 | 2.4:-11390891 | MS.gene31551:CDS |
| ATCTGCACCCAAAGGTTATA+AGG | 0.323238 | 2.4:-11390831 | MS.gene31551:intron |
| GTACTTCTTTAGGTATTGTT+TGG | 0.329362 | 2.4:+11391510 | None:intergenic |
| CTAAAGTCAATACTAGATTA+AGG | 0.347996 | 2.4:-11392723 | MS.gene31551:CDS |
| AGGTCTTACCTTATAACCTT+TGG | 0.354635 | 2.4:+11390823 | None:intergenic |
| CTATGTGGTTTGGCAGCATC+TGG | 0.357354 | 2.4:-11391945 | MS.gene31551:CDS |
| GGTCTTACCTTATAACCTTT+GGG | 0.357526 | 2.4:+11390824 | None:intergenic |
| ATATTGGTATGCTTCCTTCT+TGG | 0.358786 | 2.4:-11393285 | MS.gene31551:CDS |
| CTAGACTGGTTGTGGTTGAT+AGG | 0.364036 | 2.4:-11390508 | MS.gene31551:CDS |
| ATAGTGTCAATGCATAAATT+AGG | 0.364083 | 2.4:+11391321 | None:intergenic |
| AAGCTCAAAGAATGTTGATA+TGG | 0.364975 | 2.4:+11391652 | None:intergenic |
| TACAATGTGTGGGATCTAAT+AGG | 0.376699 | 2.4:-11391043 | MS.gene31551:CDS |
| TAGCTGACCTGAATGAATTC+TGG | 0.378851 | 2.4:+11392434 | None:intergenic |
| GATACCGGAGCACATAGTTT+AGG | 0.399627 | 2.4:-11391272 | MS.gene31551:CDS |
| AAGATCAGCTGAAACCGTTT+TGG | 0.400371 | 2.4:+11391547 | None:intergenic |
| GTACGGTAGTATTTCACAAT+TGG | 0.413573 | 2.4:+11391590 | None:intergenic |
| ACAGTCTTTCCTATGTGGTT+TGG | 0.413718 | 2.4:-11391955 | MS.gene31551:intron |
| ATAATGTTGACATCATTCTT+GGG | 0.414131 | 2.4:-11390890 | MS.gene31551:CDS |
| TAGTTGGATTTAGCAACATC+TGG | 0.417970 | 2.4:-11392566 | MS.gene31551:CDS |
| GGGTCCAGAACAAAATGCTT+TGG | 0.429540 | 2.4:-11390581 | MS.gene31551:CDS |
| GTATGCTTCCTTCTTGGCAA+TGG | 0.430207 | 2.4:-11393279 | MS.gene31551:CDS |
| CATGTTCAAGGTGGAATGAT+TGG | 0.433600 | 2.4:-11392476 | MS.gene31551:CDS |
| GTATCTTCAGACAGAAATCC+TGG | 0.434888 | 2.4:+11391290 | None:intergenic |
| CATGAAGCCAGAATTCATTC+AGG | 0.440760 | 2.4:-11392441 | MS.gene31551:intron |
| GGTCCAGAACAAAATGCTTT+GGG | 0.444913 | 2.4:-11390580 | MS.gene31551:CDS |
| ACTAGATTAAGGAACCTGTT+TGG | 0.445916 | 2.4:-11392712 | MS.gene31551:CDS |
| TTGGTGTTGTTTCTACTTGG+AGG | 0.450252 | 2.4:-11390550 | MS.gene31551:CDS |
| TTGTTGGTGTTGTTTCTACT+TGG | 0.466918 | 2.4:-11390553 | MS.gene31551:CDS |
| AAATGCTTTGGGAAACTTGT+TGG | 0.472777 | 2.4:-11390569 | MS.gene31551:CDS |
| TCTAAGGATGGTCTTAGAAA+AGG | 0.472918 | 2.4:-11391873 | MS.gene31551:CDS |
| TGTGCAATTAGTGGTGCCTT+TGG | 0.477018 | 2.4:-11392512 | MS.gene31551:CDS |
| TGCAGAATTATCATCCCTCC+AGG | 0.477663 | 2.4:-11392810 | MS.gene31551:intron |
| GCAAGTGTTCCAACTGCAAA+TGG | 0.482568 | 2.4:+11392766 | None:intergenic |
| GGGTTACACTAGACTGGTTG+TGG | 0.484518 | 2.4:-11390516 | MS.gene31551:CDS |
| ACTGCAAAGTATGGTGATCA+AGG | 0.485522 | 2.4:-11390920 | MS.gene31551:CDS |
| ATTGGTATATGTGCAATTAG+TGG | 0.486598 | 2.4:-11392521 | MS.gene31551:CDS |
| ATGTTACAGTCTTTCCTATG+TGG | 0.489292 | 2.4:-11391960 | MS.gene31551:intron |
| TCAGCTGATCTTGCAGCTGG+TGG | 0.503591 | 2.4:-11391536 | MS.gene31551:CDS |
| AAAGACATCCATTGCCAAGA+AGG | 0.509411 | 2.4:+11393271 | None:intergenic |
| GTTTCAGCTGATCTTGCAGC+TGG | 0.510600 | 2.4:-11391539 | MS.gene31551:CDS |
| GTGTTCCAACTGCAAATGGC+TGG | 0.520973 | 2.4:+11392770 | None:intergenic |
| TGTAATTAACCTTAAAGCAG+AGG | 0.522589 | 2.4:+11391914 | None:intergenic |
| TTGCAGGGGTTACACTAGAC+TGG | 0.523837 | 2.4:-11390522 | MS.gene31551:CDS |
| ATTTCAAGAATTTCAAGAGT+GGG | 0.530371 | 2.4:+11391011 | None:intergenic |
| GATTTAGCAACATCTGGTAA+AGG | 0.531613 | 2.4:-11392560 | MS.gene31551:CDS |
| ACATCTGGTAAAGGAGGACT+TGG | 0.542893 | 2.4:-11392551 | MS.gene31551:CDS |
| ACAAACAGTGAGGTAACCAT+TGG | 0.544603 | 2.4:+11390862 | None:intergenic |
| TTTGCAGTGAAATAAAATGC+TGG | 0.546823 | 2.4:+11390935 | None:intergenic |
| GCATAAACCTCTAGACGTGT+TGG | 0.547583 | 2.4:+11393414 | None:intergenic |
| GTTGCAGATGCTCATGTTCA+AGG | 0.549362 | 2.4:-11392488 | MS.gene31551:CDS |
| TGTGGTTGATAGGCAAAGGT+TGG | 0.549746 | 2.4:-11390498 | MS.gene31551:CDS |
| CAAAGTATGGTGATCAAGGT+TGG | 0.550801 | 2.4:-11390916 | MS.gene31551:CDS |
| GCATTTGATAATTCTAAGGA+TGG | 0.554074 | 2.4:-11391885 | MS.gene31551:CDS |
| TCATTCTTGGGGCTATCCAA+TGG | 0.554884 | 2.4:-11390878 | MS.gene31551:CDS |
| GGATTTCTGTCTGAAGATAC+CGG | 0.555158 | 2.4:-11391287 | MS.gene31551:CDS |
| TGCACACAAACAAGAGAGGA+AGG | 0.556796 | 2.4:-11391393 | MS.gene31551:CDS |
| ACAAGAGAGGAAGGGAAACA+AGG | 0.569413 | 2.4:-11391384 | MS.gene31551:CDS |
| TGTTCCTAAACTATGTGCTC+CGG | 0.571762 | 2.4:+11391268 | None:intergenic |
| GTATACCAGCCATTTGCAGT+TGG | 0.574201 | 2.4:-11392775 | MS.gene31551:CDS |
| TAAACCTCTAGACGTGTTGG+AGG | 0.581439 | 2.4:+11393417 | None:intergenic |
| AGCATCAGAAGGATCCAAAA+CGG | 0.581586 | 2.4:-11391561 | MS.gene31551:CDS |
| TAATGTTGACATCATTCTTG+GGG | 0.600627 | 2.4:-11390889 | MS.gene31551:CDS |
| AATGAATTCTGGCTTCATGT+AGG | 0.600985 | 2.4:+11392445 | None:intergenic |
| TGAGCCTCCAACACGTCTAG+AGG | 0.604316 | 2.4:-11393421 | MS.gene31551:intron |
| AATTTCAAGAATTTCAAGAG+TGG | 0.605836 | 2.4:+11391010 | None:intergenic |
| TTAGCAACATCTGGTAAAGG+AGG | 0.617570 | 2.4:-11392557 | MS.gene31551:CDS |
| CAGATGCTGCCAAACCACAT+AGG | 0.618573 | 2.4:+11391946 | None:intergenic |
| TAATTGCAATGTACAATGTG+TGG | 0.621011 | 2.4:-11391054 | MS.gene31551:CDS |
| CGTACAAAAGCAGCATCAGA+AGG | 0.622959 | 2.4:-11391572 | MS.gene31551:CDS |
| ATGAGCATCTGCAACTCCAA+AGG | 0.623544 | 2.4:+11392496 | None:intergenic |
| AATTGCAATGTACAATGTGT+GGG | 0.632930 | 2.4:-11391053 | MS.gene31551:CDS |
| GTTATGACATCTGCACCCAA+AGG | 0.634499 | 2.4:-11390839 | MS.gene31551:CDS |
| TGGAGGCTCAACGTTGACCA+TGG | 0.638186 | 2.4:+11393434 | None:intergenic |
| TATCTTCAGACAGAAATCCT+GGG | 0.646675 | 2.4:+11391291 | None:intergenic |
| ACAAGTGTAAGCACCCTGGA+GGG | 0.662948 | 2.4:+11392796 | None:intergenic |
| GTATACAAGTGTAAGCACCC+TGG | 0.665189 | 2.4:+11392792 | None:intergenic |
| TGGTTGTGGTTGATAGGCAA+AGG | 0.669026 | 2.4:-11390502 | MS.gene31551:CDS |
| GCACACAAACAAGAGAGGAA+GGG | 0.670991 | 2.4:-11391392 | MS.gene31551:CDS |
| ATCATGCACACAAACAAGAG+AGG | 0.673529 | 2.4:-11391397 | MS.gene31551:CDS |
| GAGCACATAGTTTAGGAACA+TGG | 0.674637 | 2.4:-11391265 | MS.gene31551:intron |
| TACAAGTGTAAGCACCCTGG+AGG | 0.676424 | 2.4:+11392795 | None:intergenic |
| GCAGAATTATCATCCCTCCA+GGG | 0.704317 | 2.4:-11392809 | MS.gene31551:intron |
| GCAGATGCTCATGTTCAAGG+TGG | 0.722859 | 2.4:-11392485 | MS.gene31551:CDS |
| ATGTCATAACACAAACAGTG+AGG | 0.743595 | 2.4:+11390852 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTAAAATAAAAGTC+TGG | + | chr2.4:11390807-11390826 | None:intergenic | 10.0% |
| !!! | ATTAAAATTATTAGCTTTTT+AGG | + | chr2.4:11391737-11391756 | None:intergenic | 10.0% |
| !!! | TTATGTTTTAATTTATTGTA+GGG | - | chr2.4:11393326-11393345 | MS.gene31551:intron | 10.0% |
| !!! | TTTATGTTTTAATTTATTGT+AGG | - | chr2.4:11393325-11393344 | MS.gene31551:intron | 10.0% |
| !! | AAAATTACCAAAGATTTAAA+AGG | + | chr2.4:11392706-11392725 | None:intergenic | 15.0% |
| !! | CATAAATATTAATGTGAATT+TGG | + | chr2.4:11393311-11393330 | None:intergenic | 15.0% |
| !! | GAAATTATTATCACATTATA+AGG | + | chr2.4:11392493-11392512 | None:intergenic | 15.0% |
| !! | TATTATAGTAGTGTTTAATT+TGG | - | chr2.4:11393135-11393154 | MS.gene31551:intron | 15.0% |
| !!! | AATAATTTTAATTTCTATGG+TGG | - | chr2.4:11391745-11391764 | MS.gene31551:intron | 15.0% |
| !!! | ATTAGATGAAATTTTGATTA+TGG | + | chr2.4:11392121-11392140 | None:intergenic | 15.0% |
| !!! | GCTAATAATTTTAATTTCTA+TGG | - | chr2.4:11391742-11391761 | MS.gene31551:intron | 15.0% |
| !!! | TTTCAATTTTTTGTTGTTAT+TGG | - | chr2.4:11390595-11390614 | MS.gene31551:intron | 15.0% |
| !! | AAAATATTTCTTACAAACCA+AGG | - | chr2.4:11390820-11390839 | MS.gene31551:intron | 20.0% |
| !! | AAACCAAACATAACAATTTA+TGG | + | chr2.4:11391675-11391694 | None:intergenic | 20.0% |
| !! | ACAATTAGTTGAATAGATAT+AGG | + | chr2.4:11391287-11391306 | None:intergenic | 20.0% |
| !! | ATCAAACATAAACGAAATTA+TGG | + | chr2.4:11391620-11391639 | None:intergenic | 20.0% |
| !! | ATTTGGATTTCATATAGTAT+AGG | + | chr2.4:11393294-11393313 | None:intergenic | 20.0% |
| !! | CTAAATAGTATATAGAGTAA+TGG | + | chr2.4:11392214-11392233 | None:intergenic | 20.0% |
| !! | TTTATGTTTGATTCTATCTT+TGG | - | chr2.4:11391628-11391647 | MS.gene31551:CDS | 20.0% |
| !! | TTTGGATTTCATATAGTATA+GGG | + | chr2.4:11393293-11393312 | None:intergenic | 20.0% |
| !!! | AGTTGTGCTTATAATTTTTT+AGG | - | chr2.4:11392837-11392856 | MS.gene31551:intron | 20.0% |
| !!! | ATTTTACGTTCAATTAATTC+AGG | - | chr2.4:11391877-11391896 | MS.gene31551:CDS | 20.0% |
| !!! | GATTTTTATCGATTTATGTT+AGG | + | chr2.4:11391826-11391845 | None:intergenic | 20.0% |
| !!! | TATTTATGCTTTAAGGATAT+TGG | + | chr2.4:11393264-11393283 | None:intergenic | 20.0% |
| !!! | TATTTCACAATTGGTATTTT+AGG | + | chr2.4:11392331-11392350 | None:intergenic | 20.0% |
| !!! | TTTTTTCATAACCACTTTTT+TGG | - | chr2.4:11391247-11391266 | MS.gene31551:intron | 20.0% |
| ! | AATTTCAAGAATTTCAAGAG+TGG | + | chr2.4:11392920-11392939 | None:intergenic | 25.0% |
| ! | ACTACTATAATATACTCTCA+AGG | + | chr2.4:11393127-11393146 | None:intergenic | 25.0% |
| ! | ACTCTTGAAATTCTTGAAAT+TGG | - | chr2.4:11392919-11392938 | MS.gene31551:intron | 25.0% |
| ! | ATAATGTTGACATCATTCTT+GGG | - | chr2.4:11393037-11393056 | MS.gene31551:intron | 25.0% |
| ! | ATAGTGTCAATGCATAAATT+AGG | + | chr2.4:11392609-11392628 | None:intergenic | 25.0% |
| ! | ATCAAGAAGTAAGTAAAGTA+TGG | + | chr2.4:11390770-11390789 | None:intergenic | 25.0% |
| ! | ATCTATGATACTTACATCTA+TGG | - | chr2.4:11391938-11391957 | MS.gene31551:CDS | 25.0% |
| ! | ATTTCAAGAATTTCAAGAGT+GGG | + | chr2.4:11392919-11392938 | None:intergenic | 25.0% |
| ! | CAATAGCAACAAATAAGAAT+TGG | + | chr2.4:11392168-11392187 | None:intergenic | 25.0% |
| ! | CTAAAGTCAATACTAGATTA+AGG | - | chr2.4:11391204-11391223 | MS.gene31551:intron | 25.0% |
| ! | CTCATAAATCAATTACATAC+CGG | + | chr2.4:11390732-11390751 | None:intergenic | 25.0% |
| ! | GAAAGAAATAGTACTTCTTT+AGG | + | chr2.4:11392430-11392449 | None:intergenic | 25.0% |
| ! | TACTATTAACACCAAAAAAG+TGG | + | chr2.4:11391261-11391280 | None:intergenic | 25.0% |
| ! | TCCAACTACAACAAATTTAT+TGG | + | chr2.4:11391349-11391368 | None:intergenic | 25.0% |
| ! | TGACCATAAATTGTTATGTT+TGG | - | chr2.4:11391669-11391688 | MS.gene31551:intron | 25.0% |
| ! | TTACTACATTTACTTGTTTC+CGG | - | chr2.4:11390710-11390729 | MS.gene31551:intron | 25.0% |
| !! | AAAAAAGAGTATATCCAAAC+AGG | + | chr2.4:11391232-11391251 | None:intergenic | 25.0% |
| !! | GATAATAATTTCCCTTTTTC+AGG | - | chr2.4:11392501-11392520 | MS.gene31551:CDS | 25.0% |
| !! | TCGCAATTTAGAACTATAAT+CGG | + | chr2.4:11391521-11391540 | None:intergenic | 25.0% |
| !! | TGTTGTTATTGGTATTCATA+GGG | - | chr2.4:11390606-11390625 | MS.gene31551:intron | 25.0% |
| !! | TTGAACAATTTGTCATTTAG+TGG | + | chr2.4:11390872-11390891 | None:intergenic | 25.0% |
| !! | TTGTTGTTATTGGTATTCAT+AGG | - | chr2.4:11390605-11390624 | MS.gene31551:intron | 25.0% |
| !!! | AAATATTTTTTGTGAACCTC+TGG | + | chr2.4:11390992-11391011 | None:intergenic | 25.0% |
| !!! | TCCAATAAATTTGTTGTAGT+TGG | - | chr2.4:11391345-11391364 | MS.gene31551:CDS | 25.0% |
| !!! | TTTTATTTCACTGCAAAGTA+TGG | - | chr2.4:11392998-11393017 | MS.gene31551:intron | 25.0% |
| AAGCTCAAAGAATGTTGATA+TGG | + | chr2.4:11392278-11392297 | None:intergenic | 30.0% | |
| AATTGCAATGTACAATGTGT+GGG | - | chr2.4:11392874-11392893 | MS.gene31551:intron | 30.0% | |
| ACTTTGATTCCTTTACCATT+AGG | - | chr2.4:11391309-11391328 | MS.gene31551:CDS | 30.0% | |
| ATTGGTATATGTGCAATTAG+TGG | - | chr2.4:11391406-11391425 | MS.gene31551:CDS | 30.0% | |
| GAAAATCAAAACCATCCTAA+TGG | + | chr2.4:11391327-11391346 | None:intergenic | 30.0% | |
| GATAATGTTGACATCATTCT+TGG | - | chr2.4:11393036-11393055 | MS.gene31551:intron | 30.0% | |
| GATCTGGTATTTATGCTTTA+AGG | + | chr2.4:11393271-11393290 | None:intergenic | 30.0% | |
| TAATGTTGACATCATTCTTG+GGG | - | chr2.4:11393038-11393057 | MS.gene31551:intron | 30.0% | |
| TAATTGCAATGTACAATGTG+TGG | - | chr2.4:11392873-11392892 | MS.gene31551:intron | 30.0% | |
| TAGTCAAACTTTACTTACTC+CGG | - | chr2.4:11390928-11390947 | MS.gene31551:CDS | 30.0% | |
| TCTAGAGGTTTATGCTTAAT+TGG | - | chr2.4:11390521-11390540 | MS.gene31551:CDS | 30.0% | |
| TGTAATTAACCTTAAAGCAG+AGG | + | chr2.4:11392016-11392035 | None:intergenic | 30.0% | |
| TTACCAAAGATTTAAAAGGC+AGG | + | chr2.4:11392702-11392721 | None:intergenic | 30.0% | |
| TTGAATTACACCAACATACA+AGG | + | chr2.4:11391038-11391057 | None:intergenic | 30.0% | |
| TTTATCTACAGCAATCCATT+AGG | + | chr2.4:11392782-11392801 | None:intergenic | 30.0% | |
| TTTCATATAGTATAGGGATC+TGG | + | chr2.4:11393287-11393306 | None:intergenic | 30.0% | |
| TTTGCAGTGAAATAAAATGC+TGG | + | chr2.4:11392995-11393014 | None:intergenic | 30.0% | |
| ! | AGCAGCATTTGATAATTCTA+AGG | - | chr2.4:11392038-11392057 | MS.gene31551:intron | 30.0% |
| ! | GCATTTGATAATTCTAAGGA+TGG | - | chr2.4:11392042-11392061 | MS.gene31551:intron | 30.0% |
| ! | GTACTTCTTTAGGTATTGTT+TGG | + | chr2.4:11392420-11392439 | None:intergenic | 30.0% |
| ! | TTTTGTATCCATACATCTGT+CGG | + | chr2.4:11391783-11391802 | None:intergenic | 30.0% |
| !! | AGTAGTGTTTAATTTGGAAC+CGG | - | chr2.4:11393141-11393160 | MS.gene31551:intron | 30.0% |
| !! | TTATGCTTTAAGGATATTGG+TGG | + | chr2.4:11393261-11393280 | None:intergenic | 30.0% |
| ACTAGATTAAGGAACCTGTT+TGG | - | chr2.4:11391215-11391234 | MS.gene31551:intron | 35.0% | |
| AGGTCTTACCTTATAACCTT+TGG | + | chr2.4:11393107-11393126 | None:intergenic | 35.0% | |
| ATATTGGTATGCTTCCTTCT+TGG | - | chr2.4:11390642-11390661 | MS.gene31551:intron | 35.0% | |
| ATGATCCTCATCCTGAAAAA+GGG | + | chr2.4:11392515-11392534 | None:intergenic | 35.0% | |
| ATGTCATAACACAAACAGTG+AGG | + | chr2.4:11393078-11393097 | None:intergenic | 35.0% | |
| ATGTTACAGTCTTTCCTATG+TGG | - | chr2.4:11391967-11391986 | MS.gene31551:intron | 35.0% | |
| ATTCAATTCCGACAGATGTA+TGG | - | chr2.4:11391772-11391791 | MS.gene31551:intron | 35.0% | |
| CAAAACCATCCTAATGGTAA+AGG | + | chr2.4:11391321-11391340 | None:intergenic | 35.0% | |
| GATGGCTGTTTGATCAAAAT+CGG | - | chr2.4:11393203-11393222 | MS.gene31551:intron | 35.0% | |
| GATTTAGCAACATCTGGTAA+AGG | - | chr2.4:11391367-11391386 | MS.gene31551:CDS | 35.0% | |
| GCGATTCATAATTGCAATTG+TGG | - | chr2.4:11391537-11391556 | MS.gene31551:CDS | 35.0% | |
| GGGAAAATATGCTGCAATAT+TGG | - | chr2.4:11390626-11390645 | MS.gene31551:intron | 35.0% | |
| GGTCTTACCTTATAACCTTT+GGG | + | chr2.4:11393106-11393125 | None:intergenic | 35.0% | |
| GTACGGTAGTATTTCACAAT+TGG | + | chr2.4:11392340-11392359 | None:intergenic | 35.0% | |
| TAAGCGTGAGTTTGATTATG+CGG | + | chr2.4:11391919-11391938 | None:intergenic | 35.0% | |
| TACAATGTGTGGGATCTAAT+AGG | - | chr2.4:11392884-11392903 | MS.gene31551:intron | 35.0% | |
| TAGTTGGATTTAGCAACATC+TGG | - | chr2.4:11391361-11391380 | MS.gene31551:CDS | 35.0% | |
| TATCTTCAGACAGAAATCCT+GGG | + | chr2.4:11392639-11392658 | None:intergenic | 35.0% | |
| TGATTCCTTTACCATTAGGA+TGG | - | chr2.4:11391313-11391332 | MS.gene31551:CDS | 35.0% | |
| TTGATCAAAATCGGATAGTC+TGG | - | chr2.4:11393212-11393231 | MS.gene31551:intron | 35.0% | |
| ! | ATCTGAGTTTGATTTCTGAG+TGG | - | chr2.4:11390896-11390915 | MS.gene31551:CDS | 35.0% |
| ! | CTACCTGCCTTTTAAATCTT+TGG | - | chr2.4:11392696-11392715 | MS.gene31551:CDS | 35.0% |
| ! | TCTAAGGATGGTCTTAGAAA+AGG | - | chr2.4:11392054-11392073 | MS.gene31551:intron | 35.0% |
| ! | TTGACACTATCTATTTTCCC+AGG | - | chr2.4:11392619-11392638 | MS.gene31551:intron | 35.0% |
| ! | TTTTACGAATCGAAACGACA+AGG | - | chr2.4:11392749-11392768 | MS.gene31551:CDS | 35.0% |
| !! | AAATGCTTTGGGAAACTTGT+TGG | - | chr2.4:11393358-11393377 | MS.gene31551:intron | 35.0% |
| !! | AATGAATTCTGGCTTCATGT+AGG | + | chr2.4:11391485-11391504 | None:intergenic | 35.0% |
| !! | TTGTTGGTGTTGTTTCTACT+TGG | - | chr2.4:11393374-11393393 | MS.gene31551:intron | 35.0% |
| !! | TTTCCCAAAGCATTTTGTTC+TGG | + | chr2.4:11393353-11393372 | None:intergenic | 35.0% |
| !!! | AATTTCCCTTTTTCAGGATG+AGG | - | chr2.4:11392507-11392526 | MS.gene31551:CDS | 35.0% |
| !!! | TACTTGGAGGTATTTTTGCA+GGG | - | chr2.4:11393390-11393409 | MS.gene31551:intron | 35.0% |
| AAAGACATCCATTGCCAAGA+AGG | + | chr2.4:11390659-11390678 | None:intergenic | 40.0% | |
| ACAAACAGTGAGGTAACCAT+TGG | + | chr2.4:11393068-11393087 | None:intergenic | 40.0% | |
| ACAGTCTTTCCTATGTGGTT+TGG | - | chr2.4:11391972-11391991 | MS.gene31551:intron | 40.0% | |
| ACCAAGGAATTTGACTCAAG+TGG | - | chr2.4:11390836-11390855 | MS.gene31551:CDS | 40.0% | |
| ACCACTTGAGTCAAATTCCT+TGG | + | chr2.4:11390840-11390859 | None:intergenic | 40.0% | |
| ACTGCAAAGTATGGTGATCA+AGG | - | chr2.4:11393007-11393026 | MS.gene31551:intron | 40.0% | |
| AGCATCAGAAGGATCCAAAA+CGG | - | chr2.4:11392366-11392385 | MS.gene31551:intron | 40.0% | |
| AGGGATGATAATTCTGCACA+CGG | + | chr2.4:11391115-11391134 | None:intergenic | 40.0% | |
| ATATCTCGAATGCGTGAATG+CGG | + | chr2.4:11393182-11393201 | None:intergenic | 40.0% | |
| ATCATGCACACAAACAAGAG+AGG | - | chr2.4:11392530-11392549 | MS.gene31551:CDS | 40.0% | |
| ATCTGCACCCAAAGGTTATA+AGG | - | chr2.4:11393096-11393115 | MS.gene31551:intron | 40.0% | |
| ATGTGCTTCTCCTTGTATGT+TGG | - | chr2.4:11391025-11391044 | MS.gene31551:CDS | 40.0% | |
| CAAAGTATGGTGATCAAGGT+TGG | - | chr2.4:11393011-11393030 | MS.gene31551:intron | 40.0% | |
| CATGAAGCCAGAATTCATTC+AGG | - | chr2.4:11391486-11391505 | MS.gene31551:intron | 40.0% | |
| CATGATCCTCATCCTGAAAA+AGG | + | chr2.4:11392516-11392535 | None:intergenic | 40.0% | |
| CATGTTCAAGGTGGAATGAT+TGG | - | chr2.4:11391451-11391470 | MS.gene31551:intron | 40.0% | |
| GAAAATGAGTCCCAGTAATC+TGG | + | chr2.4:11390962-11390981 | None:intergenic | 40.0% | |
| GAGCACATAGTTTAGGAACA+TGG | - | chr2.4:11392662-11392681 | MS.gene31551:intron | 40.0% | |
| GGATTGAACTCCAGATTACT+GGG | - | chr2.4:11390949-11390968 | MS.gene31551:CDS | 40.0% | |
| GGATTTCTGTCTGAAGATAC+CGG | - | chr2.4:11392640-11392659 | MS.gene31551:intron | 40.0% | |
| GGTCCAGAACAAAATGCTTT+GGG | - | chr2.4:11393347-11393366 | MS.gene31551:intron | 40.0% | |
| GTATCTTCAGACAGAAATCC+TGG | + | chr2.4:11392640-11392659 | None:intergenic | 40.0% | |
| GTGCATTAACCTCTGCTTTA+AGG | - | chr2.4:11392004-11392023 | MS.gene31551:intron | 40.0% | |
| TAGCTGACCTGAATGAATTC+TGG | + | chr2.4:11391496-11391515 | None:intergenic | 40.0% | |
| TGTTCCTAAACTATGTGCTC+CGG | + | chr2.4:11392662-11392681 | None:intergenic | 40.0% | |
| TTAGCAACATCTGGTAAAGG+AGG | - | chr2.4:11391370-11391389 | MS.gene31551:CDS | 40.0% | |
| ! | AAGATCAGCTGAAACCGTTT+TGG | + | chr2.4:11392383-11392402 | None:intergenic | 40.0% |
| ! | CAGTAATCTGGAGTTCAATC+CGG | + | chr2.4:11390950-11390969 | None:intergenic | 40.0% |
| ! | CTGCATTTTACGCGATATCA+AGG | - | chr2.4:11391569-11391588 | MS.gene31551:CDS | 40.0% |
| ! | GCAATGGATGTCTTTTCTCT+TGG | - | chr2.4:11390664-11390683 | MS.gene31551:intron | 40.0% |
| ! | GGAGGACTTGGAACTTTTAT+TGG | - | chr2.4:11391388-11391407 | MS.gene31551:CDS | 40.0% |
| !! | ACCGTTCGGTTTTGATAGAA+CGG | - | chr2.4:11393235-11393254 | MS.gene31551:CDS | 40.0% |
| !! | TTGGTGTTGTTTCTACTTGG+AGG | - | chr2.4:11393377-11393396 | MS.gene31551:intron | 40.0% |
| !!! | ACTTGGAGGTATTTTTGCAG+GGG | - | chr2.4:11393391-11393410 | MS.gene31551:intron | 40.0% |
| !!! | CTACTTGGAGGTATTTTTGC+AGG | - | chr2.4:11393389-11393408 | MS.gene31551:intron | 40.0% |
| !!! | CTTCTGATGCTGCTTTTGTA+CGG | + | chr2.4:11392357-11392376 | None:intergenic | 40.0% |
| ACAAGAGAGGAAGGGAAACA+AGG | - | chr2.4:11392543-11392562 | MS.gene31551:CDS | 45.0% | |
| ACATCTGGTAAAGGAGGACT+TGG | - | chr2.4:11391376-11391395 | MS.gene31551:CDS | 45.0% | |
| ATGAGCATCTGCAACTCCAA+AGG | + | chr2.4:11391434-11391453 | None:intergenic | 45.0% | |
| CGGATTGAACTCCAGATTAC+TGG | - | chr2.4:11390948-11390967 | MS.gene31551:CDS | 45.0% | |
| CGTACAAAAGCAGCATCAGA+AGG | - | chr2.4:11392355-11392374 | MS.gene31551:intron | 45.0% | |
| GATACCGGAGCACATAGTTT+AGG | - | chr2.4:11392655-11392674 | MS.gene31551:intron | 45.0% | |
| GCAAGTGTTCCAACTGCAAA+TGG | + | chr2.4:11391164-11391183 | None:intergenic | 45.0% | |
| GCACACAAACAAGAGAGGAA+GGG | - | chr2.4:11392535-11392554 | MS.gene31551:CDS | 45.0% | |
| GCAGAATTATCATCCCTCCA+GGG | - | chr2.4:11391118-11391137 | MS.gene31551:intron | 45.0% | |
| GCATAAACCTCTAGACGTGT+TGG | + | chr2.4:11390516-11390535 | None:intergenic | 45.0% | |
| GCCGTTCTATCAAAACCGAA+CGG | + | chr2.4:11393239-11393258 | None:intergenic | 45.0% | |
| GGGTCCAGAACAAAATGCTT+TGG | - | chr2.4:11393346-11393365 | MS.gene31551:intron | 45.0% | |
| GTATACAAGTGTAAGCACCC+TGG | + | chr2.4:11391138-11391157 | None:intergenic | 45.0% | |
| GTATACCAGCCATTTGCAGT+TGG | - | chr2.4:11391152-11391171 | MS.gene31551:intron | 45.0% | |
| GTATGCTTCCTTCTTGGCAA+TGG | - | chr2.4:11390648-11390667 | MS.gene31551:intron | 45.0% | |
| GTTATGACATCTGCACCCAA+AGG | - | chr2.4:11393088-11393107 | MS.gene31551:intron | 45.0% | |
| GTTGCAGATGCTCATGTTCA+AGG | - | chr2.4:11391439-11391458 | MS.gene31551:intron | 45.0% | |
| TAAACCTCTAGACGTGTTGG+AGG | + | chr2.4:11390513-11390532 | None:intergenic | 45.0% | |
| TACAGCAATCCATTAGGCGT+TGG | + | chr2.4:11392776-11392795 | None:intergenic | 45.0% | |
| TATCTCGAATGCGTGAATGC+GGG | + | chr2.4:11393181-11393200 | None:intergenic | 45.0% | |
| TCACGCATTCGAGATATCGA+TGG | - | chr2.4:11393185-11393204 | MS.gene31551:intron | 45.0% | |
| TCATTCTTGGGGCTATCCAA+TGG | - | chr2.4:11393049-11393068 | MS.gene31551:intron | 45.0% | |
| TGCACACAAACAAGAGAGGA+AGG | - | chr2.4:11392534-11392553 | MS.gene31551:CDS | 45.0% | |
| TGCAGAATTATCATCCCTCC+AGG | - | chr2.4:11391117-11391136 | MS.gene31551:intron | 45.0% | |
| TGTGCAATTAGTGGTGCCTT+TGG | - | chr2.4:11391415-11391434 | MS.gene31551:intron | 45.0% | |
| ! | CTAGACTGGTTGTGGTTGAT+AGG | - | chr2.4:11393419-11393438 | MS.gene31551:intron | 45.0% |
| ! | CTCATTTTCCAGAGAACCAG+AGG | - | chr2.4:11390973-11390992 | MS.gene31551:CDS | 45.0% |
| !! | TGGTTGTGGTTGATAGGCAA+AGG | - | chr2.4:11393425-11393444 | MS.gene31551:CDS | 45.0% |
| !! | TGTGGTTGATAGGCAAAGGT+TGG | - | chr2.4:11393429-11393448 | MS.gene31551:CDS | 45.0% |
| !! | TTTGTGAACCTCTGGTTCTC+TGG | + | chr2.4:11390984-11391003 | None:intergenic | 45.0% |
| !!! | AATTTGAAATTAAAATAAAA+TGG | + | chr2.4:11392730-11392749 | None:intergenic | 5.0% |
| ACAAGTGTAAGCACCCTGGA+GGG | + | chr2.4:11391134-11391153 | None:intergenic | 50.0% | |
| ATCGGATAGTCTGGACCGTT+CGG | - | chr2.4:11393221-11393240 | MS.gene31551:CDS | 50.0% | |
| CAGATGCTGCCAAACCACAT+AGG | + | chr2.4:11391984-11392003 | None:intergenic | 50.0% | |
| GCAGATGCTCATGTTCAAGG+TGG | - | chr2.4:11391442-11391461 | MS.gene31551:intron | 50.0% | |
| GTGTTCCAACTGCAAATGGC+TGG | + | chr2.4:11391160-11391179 | None:intergenic | 50.0% | |
| GTTTCAGCTGATCTTGCAGC+TGG | - | chr2.4:11392388-11392407 | MS.gene31551:intron | 50.0% | |
| TACAAGTGTAAGCACCCTGG+AGG | + | chr2.4:11391135-11391154 | None:intergenic | 50.0% | |
| TTGCAGGGGTTACACTAGAC+TGG | - | chr2.4:11393405-11393424 | MS.gene31551:intron | 50.0% | |
| ! | CTATGTGGTTTGGCAGCATC+TGG | - | chr2.4:11391982-11392001 | MS.gene31551:intron | 50.0% |
| ! | GGGTTACACTAGACTGGTTG+TGG | - | chr2.4:11393411-11393430 | MS.gene31551:intron | 50.0% |
| ! | TAATTTGGAACCGGCTCCCT+GGG | - | chr2.4:11393150-11393169 | MS.gene31551:intron | 50.0% |
| ! | TTAATTTGGAACCGGCTCCC+TGG | - | chr2.4:11393149-11393168 | MS.gene31551:intron | 50.0% |
| CGACAAGGACCAACGCCTAA+TGG | - | chr2.4:11392764-11392783 | MS.gene31551:CDS | 55.0% | |
| GTGAATGCGGGAAATCCCCA+GGG | + | chr2.4:11393169-11393188 | None:intergenic | 55.0% | |
| TCAGCTGATCTTGCAGCTGG+TGG | - | chr2.4:11392391-11392410 | MS.gene31551:intron | 55.0% | |
| TGAGCCTCCAACACGTCTAG+AGG | - | chr2.4:11390506-11390525 | MS.gene31551:CDS | 55.0% | |
| ! | AATTTGGAACCGGCTCCCTG+GGG | - | chr2.4:11393151-11393170 | MS.gene31551:intron | 55.0% |
| CGTGAATGCGGGAAATCCCC+AGG | + | chr2.4:11393170-11393189 | None:intergenic | 60.0% | |
| GCGGGAAATCCCCAGGGAGC+CGG | + | chr2.4:11393163-11393182 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 11390495 | 11393454 | 11390495 | ID=MS.gene31551 |
| chr2.4 | mRNA | 11390495 | 11393454 | 11390495 | ID=MS.gene31551.t1;Parent=MS.gene31551 |
| chr2.4 | exon | 11393422 | 11393454 | 11393422 | ID=MS.gene31551.t1.exon1;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11393422 | 11393454 | 11393422 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| chr2.4 | exon | 11393218 | 11393322 | 11393218 | ID=MS.gene31551.t1.exon2;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11393218 | 11393322 | 11393218 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| chr2.4 | exon | 11392672 | 11392827 | 11392672 | ID=MS.gene31551.t1.exon3;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11392672 | 11392827 | 11392672 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| chr2.4 | exon | 11392442 | 11392585 | 11392442 | ID=MS.gene31551.t1.exon4;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11392442 | 11392585 | 11392442 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| chr2.4 | exon | 11391868 | 11391973 | 11391868 | ID=MS.gene31551.t1.exon5;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11391868 | 11391973 | 11391868 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| chr2.4 | exon | 11391514 | 11391686 | 11391514 | ID=MS.gene31551.t1.exon6;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11391514 | 11391686 | 11391514 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| chr2.4 | exon | 11391266 | 11391426 | 11391266 | ID=MS.gene31551.t1.exon7;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11391266 | 11391426 | 11391266 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| chr2.4 | exon | 11390832 | 11391090 | 11390832 | ID=MS.gene31551.t1.exon8;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11390832 | 11391090 | 11390832 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| chr2.4 | exon | 11390495 | 11390602 | 11390495 | ID=MS.gene31551.t1.exon9;Parent=MS.gene31551.t1 |
| chr2.4 | CDS | 11390495 | 11390602 | 11390495 | ID=cds.MS.gene31551.t1;Parent=MS.gene31551.t1 |
| Gene Sequence |
| Protein sequence |
