Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86339.t1 | RHN76454.1 | 97.6 | 549 | 12 | 1 | 1 | 549 | 70 | 617 | 1.20E-296 | 1028.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86339.t1 | Q39002 | 83.4 | 535 | 83 | 3 | 2 | 532 | 76 | 608 | 1.2e-254 | 880.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86339.t1 | A0A396JH30 | 97.6 | 549 | 12 | 1 | 1 | 549 | 70 | 617 | 8.3e-297 | 1028.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049257 | MS.gene86339 | 0.810622 | 1.05E-50 | -1.69E-46 |
| MS.gene049400 | MS.gene86339 | -0.819923 | 9.00E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene86339 | 0.856821 | 2.48E-62 | -1.69E-46 |
| MS.gene050133 | MS.gene86339 | -0.861965 | 7.08E-64 | -1.69E-46 |
| MS.gene050209 | MS.gene86339 | 0.835517 | 1.60E-56 | -1.69E-46 |
| MS.gene050315 | MS.gene86339 | 0.803009 | 4.28E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene86339 | -0.847244 | 1.31E-59 | -1.69E-46 |
| MS.gene050553 | MS.gene86339 | 0.845904 | 3.04E-59 | -1.69E-46 |
| MS.gene051521 | MS.gene86339 | 0.801837 | 7.46E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene86339 | 0.825665 | 4.14E-54 | -1.69E-46 |
| MS.gene051552 | MS.gene86339 | -0.813015 | 3.17E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene86339 | 0.854929 | 8.87E-62 | -1.69E-46 |
| MS.gene052135 | MS.gene86339 | 0.844307 | 8.20E-59 | -1.69E-46 |
| MS.gene052469 | MS.gene86339 | 0.901041 | 4.00E-78 | -1.69E-46 |
| MS.gene053330 | MS.gene86339 | 0.861297 | 1.13E-63 | -1.69E-46 |
| MS.gene054719 | MS.gene86339 | 0.823789 | 1.15E-53 | -1.69E-46 |
| MS.gene054809 | MS.gene86339 | -0.818735 | 1.68E-52 | -1.69E-46 |
| MS.gene054810 | MS.gene86339 | -0.807566 | 4.75E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene86339 | -0.800778 | 1.23E-48 | -1.69E-46 |
| MS.gene055539 | MS.gene86339 | 0.883202 | 5.48E-71 | -1.69E-46 |
| MS.gene05553 | MS.gene86339 | 0.852117 | 5.70E-61 | -1.69E-46 |
| MS.gene05556 | MS.gene86339 | 0.886144 | 4.42E-72 | -1.69E-46 |
| MS.gene056233 | MS.gene86339 | 0.804817 | 1.80E-49 | -1.69E-46 |
| MS.gene056305 | MS.gene86339 | 0.806571 | 7.71E-50 | -1.69E-46 |
| MS.gene056633 | MS.gene86339 | 0.840666 | 7.58E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene86339 | 0.816509 | 5.33E-52 | -1.69E-46 |
| MS.gene058743 | MS.gene86339 | 0.801136 | 1.04E-48 | -1.69E-46 |
| MS.gene058746 | MS.gene86339 | 0.8092 | 2.13E-50 | -1.69E-46 |
| MS.gene059512 | MS.gene86339 | 0.815009 | 1.15E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene86339 | 0.854885 | 9.13E-62 | -1.69E-46 |
| MS.gene059946 | MS.gene86339 | 0.822129 | 2.79E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene86339 | 0.802433 | 5.62E-49 | -1.69E-46 |
| MS.gene060717 | MS.gene86339 | 0.848882 | 4.62E-60 | -1.69E-46 |
| MS.gene061231 | MS.gene86339 | 0.859077 | 5.31E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86339.t1 | MTR_2g102740 | 92.896 | 549 | 16 | 2 | 1 | 549 | 70 | 595 | 0.0 | 1005 |
| MS.gene86339.t1 | MTR_4g011460 | 84.810 | 553 | 74 | 3 | 1 | 549 | 77 | 623 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86339.t1 | AT1G80300 | 83.054 | 537 | 83 | 2 | 2 | 533 | 76 | 609 | 0.0 | 887 |
| MS.gene86339.t1 | AT1G15500 | 81.885 | 541 | 92 | 2 | 2 | 538 | 73 | 611 | 0.0 | 872 |
Find 120 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTATCTGTTTCCTTTAT+TGG | 0.142710 | 2.3:+1918874 | MS.gene86339:CDS |
| ATTGCTTTCTTTGGGGCTTT+TGG | 0.145735 | 2.3:+1917613 | MS.gene86339:CDS |
| CATATTTGTTGAATATAAAT+TGG | 0.215723 | 2.3:-1919979 | None:intergenic |
| TGCTTGCAATTATGAGAATT+TGG | 0.220461 | 2.3:+1917725 | MS.gene86339:CDS |
| ATCCTTGGACCGCGGTTTCT+TGG | 0.225577 | 2.3:+1917700 | MS.gene86339:CDS |
| CTTTCAGGAGAAGCCGAAAA+TGG | 0.229700 | 2.3:+1919651 | MS.gene86339:intron |
| TTGTGATTTCTGTTCTGTTT+TGG | 0.265525 | 2.3:+1917791 | MS.gene86339:CDS |
| CAATTTATATTCAACAAATA+TGG | 0.275165 | 2.3:+1919980 | MS.gene86339:CDS |
| TGATGTCTTCAAGATATATA+AGG | 0.283832 | 2.3:+1919698 | MS.gene86339:CDS |
| GCACCCGTTATTGGAAAGTT+TGG | 0.300802 | 2.3:+1920091 | MS.gene86339:CDS |
| GCCCCAAAGAAAGCAATAAA+AGG | 0.315755 | 2.3:-1917607 | None:intergenic |
| GATCCACTCGCACCCGTTAT+TGG | 0.319372 | 2.3:+1920082 | MS.gene86339:CDS |
| GTGAATCTTCCTATGGCTAT+TGG | 0.321415 | 2.3:+1917514 | MS.gene86339:CDS |
| ATACTTGGGAGGTGTGCTTT+TGG | 0.331973 | 2.3:+1920828 | MS.gene86339:CDS |
| TCTAGTCTGAGGGAAACTTT+AGG | 0.344531 | 2.3:+1918786 | MS.gene86339:CDS |
| CGCTCGTAGCCAGAAGAAAA+AGG | 0.347930 | 2.3:+1918923 | MS.gene86339:CDS |
| AATTGTTCACCCACCAATAA+AGG | 0.352531 | 2.3:-1918887 | None:intergenic |
| GGCGATTTCTCAACCGCAAC+TGG | 0.363781 | 2.3:+1919926 | MS.gene86339:CDS |
| ACTTTAGGTCCTGGAGTTGA+TGG | 0.364996 | 2.3:+1918801 | MS.gene86339:CDS |
| AGCTAATTCAACTCCATACT+TGG | 0.368256 | 2.3:+1920813 | MS.gene86339:CDS |
| AAAAGCACACCTCCCAAGTA+TGG | 0.374398 | 2.3:-1920826 | None:intergenic |
| TTCTATCCACTGTTTGGACT+TGG | 0.381227 | 2.3:+1918717 | MS.gene86339:CDS |
| GATGTTGTATGCAACCCATT+AGG | 0.390606 | 2.3:+1920736 | MS.gene86339:CDS |
| CAGTTCATGATCCTAACTTT+TGG | 0.391159 | 2.3:+1920784 | MS.gene86339:CDS |
| AAGCGATTCTATCCACTGTT+TGG | 0.399212 | 2.3:+1918711 | MS.gene86339:CDS |
| GCCACATTAGTGGTTGCATA+TGG | 0.400363 | 2.3:+1919727 | MS.gene86339:CDS |
| TGCAACCCATTAGGAAAATC+TGG | 0.407154 | 2.3:+1920745 | MS.gene86339:CDS |
| ATTTGATCCGTGCAAAGAAA+TGG | 0.413264 | 2.3:+1920189 | MS.gene86339:CDS |
| TCACCTGCTTCTGTATATAA+AGG | 0.424567 | 2.3:-1921006 | None:intergenic |
| TAGCTAGTGAACCAAAAGTT+AGG | 0.428507 | 2.3:-1920795 | None:intergenic |
| ATAAAAGACGAGTACTCATT+CGG | 0.430650 | 2.3:-1919902 | None:intergenic |
| TAGGTCCTGGAGTTGATGGT+TGG | 0.436364 | 2.3:+1918805 | MS.gene86339:CDS |
| AGGTCCTGGAGTTGATGGTT+GGG | 0.439493 | 2.3:+1918806 | MS.gene86339:CDS |
| GATAACCTTCTTAGTATCCT+TGG | 0.441619 | 2.3:+1917685 | MS.gene86339:CDS |
| ATTTCTTGCTGTAGGTCAAA+GGG | 0.442605 | 2.3:+1920701 | MS.gene86339:intron |
| CGGATCAAATAAACTGTACT+TGG | 0.442749 | 2.3:-1920176 | None:intergenic |
| CAATCCAAACTTTCCAATAA+CGG | 0.443581 | 2.3:-1920095 | None:intergenic |
| GCAGCTTCTGCTGGTGGTGA+TGG | 0.449685 | 2.3:+1917289 | MS.gene86339:CDS |
| AAACAATGAAATTACCTGAT+TGG | 0.451901 | 2.3:-1917821 | None:intergenic |
| CTCAAGAAAATTATACCACT+TGG | 0.455056 | 2.3:+1917376 | MS.gene86339:CDS |
| AAGGGATCTTGCCACATTAG+TGG | 0.458361 | 2.3:+1919717 | MS.gene86339:CDS |
| CTGTCCGACCGGAGAATACA+AGG | 0.461059 | 2.3:-1918752 | None:intergenic |
| GGAAAGAGAAACTGCTGTTA+AGG | 0.462177 | 2.3:+1920939 | MS.gene86339:CDS |
| AATCCAAACTTTCCAATAAC+GGG | 0.463035 | 2.3:-1920094 | None:intergenic |
| TTAATCTTGTTGAAGTTACA+TGG | 0.465742 | 2.3:+1919758 | MS.gene86339:CDS |
| TTTATGTCATGGCTGAATTG+TGG | 0.465791 | 2.3:+1917761 | MS.gene86339:CDS |
| TTTCAGGAGAAGCCGAAAAT+GGG | 0.471676 | 2.3:+1919652 | MS.gene86339:intron |
| TTATGTCATGGCTGAATTGT+GGG | 0.475139 | 2.3:+1917762 | MS.gene86339:CDS |
| TTATCTGTTTCCTTTATTGG+TGG | 0.477332 | 2.3:+1918877 | MS.gene86339:CDS |
| CTGAGGGAAACTTTAGGTCC+TGG | 0.481369 | 2.3:+1918792 | MS.gene86339:CDS |
| TAAAAGACGAGTACTCATTC+GGG | 0.484768 | 2.3:-1919901 | None:intergenic |
| GATGTCTTCAAGATATATAA+GGG | 0.494355 | 2.3:+1919699 | MS.gene86339:CDS |
| AATGTTGCCCTTGTATTCTC+CGG | 0.497366 | 2.3:+1918744 | MS.gene86339:CDS |
| TATCTGTTTCCTTTATTGGT+GGG | 0.500161 | 2.3:+1918878 | MS.gene86339:CDS |
| TATATTCAACAAATATGGAT+GGG | 0.507628 | 2.3:+1919985 | MS.gene86339:CDS |
| GTCCTGCTTATGACTGGAGT+TGG | 0.510084 | 2.3:+1920034 | MS.gene86339:CDS |
| GAAATCAAAGCTCAAAGCTC+AGG | 0.510846 | 2.3:+1919780 | MS.gene86339:CDS |
| TTCTGGCTACGAGCGGGAAG+AGG | 0.510867 | 2.3:-1918915 | None:intergenic |
| AATTTCTTGCTGTAGGTCAA+AGG | 0.511554 | 2.3:+1920700 | MS.gene86339:intron |
| AAAGCTGAAGCAGCTTCTGC+TGG | 0.514060 | 2.3:+1917280 | MS.gene86339:CDS |
| AACATGGGTGAATCTTCCTA+TGG | 0.516555 | 2.3:+1917507 | MS.gene86339:CDS |
| GATGAGCATTGTTGTCGGTA+TGG | 0.520984 | 2.3:+1918848 | MS.gene86339:CDS |
| ATGTAGGCCATTTCTTTGCA+CGG | 0.521303 | 2.3:-1920196 | None:intergenic |
| GCACCTTTATATACAGAAGC+AGG | 0.523808 | 2.3:+1921003 | MS.gene86339:CDS |
| GACGAGTACTCATTCGGGCT+AGG | 0.527586 | 2.3:-1919896 | None:intergenic |
| TTATATTCAACAAATATGGA+TGG | 0.528143 | 2.3:+1919984 | MS.gene86339:CDS |
| AGATTCAGATGGACTAATGA+AGG | 0.533272 | 2.3:-1921031 | None:intergenic |
| GCAATGATGAGCATTGTTGT+CGG | 0.538797 | 2.3:+1918843 | MS.gene86339:CDS |
| TTCTTAGTATCCTTGGACCG+CGG | 0.539530 | 2.3:+1917692 | MS.gene86339:CDS |
| GAAGGTAGCGATTCCAGTTG+CGG | 0.541781 | 2.3:-1919939 | None:intergenic |
| GGTTATCAGCAAATGCTTGA+GGG | 0.546477 | 2.3:-1917669 | None:intergenic |
| TTGCTAGCTGCTGTATATGT+TGG | 0.546905 | 2.3:+1920124 | MS.gene86339:CDS |
| AGAAGAACTCGAGAAAGAGT+TGG | 0.547282 | 2.3:+1920918 | MS.gene86339:CDS |
| AAAGTATTTGACTGTCCGAC+CGG | 0.548078 | 2.3:-1918763 | None:intergenic |
| TGGGTTGCATACAACATCAA+TGG | 0.549558 | 2.3:-1920731 | None:intergenic |
| AGAAATGGCCTACATACCCT+TGG | 0.550644 | 2.3:+1920204 | MS.gene86339:CDS |
| AACCTTGGTATCCTCATCCA+AGG | 0.550694 | 2.3:-1920221 | None:intergenic |
| ATGAGCATTGTTGTCGGTAT+GGG | 0.551365 | 2.3:+1918849 | MS.gene86339:CDS |
| GACCAAGAAACCGCGGTCCA+AGG | 0.553381 | 2.3:-1917702 | None:intergenic |
| TGAGGAGTTCAAGATTCAGA+TGG | 0.559870 | 2.3:-1921042 | None:intergenic |
| GGAGAATACAAGGGCAACAT+TGG | 0.560749 | 2.3:-1918742 | None:intergenic |
| AACCAACTCCAGTCATAAGC+AGG | 0.562200 | 2.3:-1920036 | None:intergenic |
| TTGCCCTTGTATTCTCCGGT+CGG | 0.566110 | 2.3:+1918748 | MS.gene86339:CDS |
| ATATTCAACAAATATGGATG+GGG | 0.569187 | 2.3:+1919986 | MS.gene86339:CDS |
| GGCCTACATACCCTTGGATG+AGG | 0.576175 | 2.3:+1920210 | MS.gene86339:CDS |
| CCTACCGTCCTGCTTATGAC+TGG | 0.580717 | 2.3:+1920028 | MS.gene86339:CDS |
| AGGTTATCAGCAAATGCTTG+AGG | 0.584662 | 2.3:-1917670 | None:intergenic |
| GCAGATAACCACCGTTGATG+AGG | 0.585549 | 2.3:+1918686 | MS.gene86339:intron |
| TTTCCAATAACGGGTGCGAG+TGG | 0.586487 | 2.3:-1920085 | None:intergenic |
| GGGTGAATATAGTTGCTAAG+AGG | 0.591742 | 2.3:-1917649 | None:intergenic |
| GCTGAAGCAGCTTCTGCTGG+TGG | 0.594367 | 2.3:+1917283 | MS.gene86339:CDS |
| ATCCTCATCCAAGGGTATGT+AGG | 0.597277 | 2.3:-1920212 | None:intergenic |
| ACATATACAGCAGCTAGCAA+TGG | 0.597920 | 2.3:-1920121 | None:intergenic |
| ATGGCCCAACCATCAACTCC+AGG | 0.601776 | 2.3:-1918810 | None:intergenic |
| TCAAGAAAATTATACCACTT+GGG | 0.601825 | 2.3:+1917377 | MS.gene86339:CDS |
| GAAGCCGAAAATGGGAACAA+TGG | 0.602041 | 2.3:+1919660 | MS.gene86339:CDS |
| GCTAATTCAACTCCATACTT+GGG | 0.602853 | 2.3:+1920814 | MS.gene86339:CDS |
| ATGTCATGGCTGAATTGTGG+GGG | 0.605136 | 2.3:+1917764 | MS.gene86339:CDS |
| AAACTGAGTGTCAAGTGACT+TGG | 0.606198 | 2.3:-1920878 | None:intergenic |
| TCCATATGCAACCACTAATG+TGG | 0.607287 | 2.3:-1919728 | None:intergenic |
| TCTTCATTCTCAGTCAACAC+TGG | 0.610944 | 2.3:-1920964 | None:intergenic |
| GCGGTCCAAGGATACTAAGA+AGG | 0.613184 | 2.3:-1917690 | None:intergenic |
| GTTCTTGTTGTGACTGCTAG+AGG | 0.613969 | 2.3:+1917454 | MS.gene86339:CDS |
| GAATCGCTTTGCCTCATCAA+CGG | 0.622356 | 2.3:-1918697 | None:intergenic |
| AACATAAAACCAATAGCCAT+AGG | 0.622502 | 2.3:-1917523 | None:intergenic |
| ACTGAGAATGAAGATGAAGA+TGG | 0.625187 | 2.3:+1920973 | MS.gene86339:CDS |
| ACCCTTGGATGAGGATACCA+AGG | 0.628244 | 2.3:+1920219 | MS.gene86339:CDS |
| TATGTCATGGCTGAATTGTG+GGG | 0.635142 | 2.3:+1917763 | MS.gene86339:CDS |
| GCTTACAAGCATCATCGTGA+AGG | 0.635903 | 2.3:-1919957 | None:intergenic |
| TTCTTCTTCGCGACGCAATG+CGG | 0.636676 | 2.3:-1920902 | None:intergenic |
| AATTCAACTCCATACTTGGG+AGG | 0.648893 | 2.3:+1920817 | MS.gene86339:CDS |
| ACCTTGGTATCCTCATCCAA+GGG | 0.649968 | 2.3:-1920220 | None:intergenic |
| CTTGCTGTAGGTCAAAGGGA+AGG | 0.663386 | 2.3:+1920705 | MS.gene86339:intron |
| AACTCCAGTCATAAGCAGGA+CGG | 0.669905 | 2.3:-1920032 | None:intergenic |
| CCAGTCATAAGCAGGACGGT+AGG | 0.670943 | 2.3:-1920028 | None:intergenic |
| TCGCTTTGCCTCATCAACGG+TGG | 0.685636 | 2.3:-1918694 | None:intergenic |
| TGTCCGACCGGAGAATACAA+GGG | 0.707927 | 2.3:-1918751 | None:intergenic |
| GCAAGCAGACCAAGAAACCG+CGG | 0.717874 | 2.3:-1917709 | None:intergenic |
| TTGGCTCCAAGTCCAAACAG+TGG | 0.718510 | 2.3:-1918723 | None:intergenic |
| AACCCATTAGGAAAATCTGG+TGG | 0.735499 | 2.3:+1920748 | MS.gene86339:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTTATATTCAACAAATA+TGG | + | chr2.3:1919980-1919999 | MS.gene86339:CDS | 15.0% |
| !! | GTATATTAAAAAGTAAAACA+AGG | - | chr2.3:1919551-1919570 | None:intergenic | 15.0% |
| !!! | AAATATTATTGAAAAGTACA+TGG | - | chr2.3:1919599-1919618 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTACATCGTTA+TGG | + | chr2.3:1919625-1919644 | MS.gene86339:intron | 15.0% |
| !!! | CATATTTGTTGAATATAAAT+TGG | - | chr2.3:1919982-1920001 | None:intergenic | 15.0% |
| !!! | GAATACTAATATATACTTTT+TGG | + | chr2.3:1918662-1918681 | MS.gene86339:intron | 15.0% |
| !!! | TTTCAAAATTTTGGATTTTA+TGG | - | chr2.3:1919573-1919592 | None:intergenic | 15.0% |
| !!! | TTTTATTGCTATATCTAAAT+TGG | + | chr2.3:1918006-1918025 | MS.gene86339:intron | 15.0% |
| !! | AAAGATTAGAAGTTATGTAA+AGG | + | chr2.3:1920322-1920341 | MS.gene86339:intron | 20.0% |
| !! | CCAAAATTATACAACTTTAT+AGG | + | chr2.3:1920644-1920663 | MS.gene86339:intron | 20.0% |
| !! | CTAGTTAACTATTCAAAATT+GGG | - | chr2.3:1918417-1918436 | None:intergenic | 20.0% |
| !! | TAATGAATGATAAGAAGAAA+AGG | - | chr2.3:1918113-1918132 | None:intergenic | 20.0% |
| !! | TATATTCAACAAATATGGAT+GGG | + | chr2.3:1919985-1920004 | MS.gene86339:CDS | 20.0% |
| !! | TCTAGTTAACTATTCAAAAT+TGG | - | chr2.3:1918418-1918437 | None:intergenic | 20.0% |
| !! | TGCTATTGAAATAAAAACTA+TGG | - | chr2.3:1919477-1919496 | None:intergenic | 20.0% |
| !! | TTATATTCAACAAATATGGA+TGG | + | chr2.3:1919984-1920003 | MS.gene86339:CDS | 20.0% |
| !!! | AAAATAATACCTTTTTCTTC+TGG | - | chr2.3:1918935-1918954 | None:intergenic | 20.0% |
| !!! | ACATGGTTTTTTCAAAATTT+TGG | - | chr2.3:1919582-1919601 | None:intergenic | 20.0% |
| !!! | CCTATAAAGTTGTATAATTT+TGG | - | chr2.3:1920647-1920666 | None:intergenic | 20.0% |
| !!! | CTATATCATTCCAATTTTAT+CGG | + | chr2.3:1919118-1919137 | MS.gene86339:intron | 20.0% |
| !!! | GACATATGATAAATTTTTTC+TGG | + | chr2.3:1917915-1917934 | MS.gene86339:intron | 20.0% |
| !!! | TATACCTTTTTTGAAAACAT+GGG | + | chr2.3:1917492-1917511 | MS.gene86339:CDS | 20.0% |
| !!! | TGTATAATTTTGGAGTATTA+AGG | - | chr2.3:1920637-1920656 | None:intergenic | 20.0% |
| !!! | TTATACCTTTTTTGAAAACA+TGG | + | chr2.3:1917491-1917510 | MS.gene86339:CDS | 20.0% |
| !!! | TTCTTTTCTCTCATATTATT+CGG | + | chr2.3:1920058-1920077 | MS.gene86339:CDS | 20.0% |
| !!! | TTGTTGTTAAGTTTGTTAAA+GGG | + | chr2.3:1918168-1918187 | MS.gene86339:intron | 20.0% |
| !!! | TTTCTGTTTATTTTATGTCA+TGG | + | chr2.3:1917750-1917769 | MS.gene86339:CDS | 20.0% |
| !!! | TTTTATTTCAATAGCATGAT+TGG | + | chr2.3:1919481-1919500 | MS.gene86339:intron | 20.0% |
| ! | AAACAATGAAATTACCTGAT+TGG | - | chr2.3:1917824-1917843 | None:intergenic | 25.0% |
| ! | AAATTGGAATGATATAGAGA+AGG | - | chr2.3:1919115-1919134 | None:intergenic | 25.0% |
| ! | AATAAGCTGAGAACAATTTA+TGG | - | chr2.3:1920508-1920527 | None:intergenic | 25.0% |
| ! | AATAGAACAAACTCATCAAA+AGG | - | chr2.3:1917988-1918007 | None:intergenic | 25.0% |
| ! | AGACAAAAGATTACAAATGA+GGG | - | chr2.3:1918224-1918243 | None:intergenic | 25.0% |
| ! | ATATTCAACAAATATGGATG+GGG | + | chr2.3:1919986-1920005 | MS.gene86339:CDS | 25.0% |
| ! | CATGTATGATAAAGTTTCAT+TGG | - | chr2.3:1920299-1920318 | None:intergenic | 25.0% |
| ! | GATGTCTTCAAGATATATAA+GGG | + | chr2.3:1919699-1919718 | MS.gene86339:CDS | 25.0% |
| ! | TAGACAAAAGATTACAAATG+AGG | - | chr2.3:1918225-1918244 | None:intergenic | 25.0% |
| ! | TCAAGAAAATTATACCACTT+GGG | + | chr2.3:1917377-1917396 | MS.gene86339:CDS | 25.0% |
| ! | TGATGTCTTCAAGATATATA+AGG | + | chr2.3:1919698-1919717 | MS.gene86339:CDS | 25.0% |
| ! | TTAAGATGTTTAACCAAACA+AGG | + | chr2.3:1920611-1920630 | MS.gene86339:intron | 25.0% |
| ! | TTAATCTTGTTGAAGTTACA+TGG | + | chr2.3:1919758-1919777 | MS.gene86339:CDS | 25.0% |
| ! | TTCATCAAGTAATACTTAAG+TGG | + | chr2.3:1918291-1918310 | MS.gene86339:intron | 25.0% |
| ! | TTGTTATCTGTTTCCTTTAT+TGG | + | chr2.3:1918874-1918893 | MS.gene86339:CDS | 25.0% |
| !! | ATCTAATGTTTTGTCAAAAC+AGG | + | chr2.3:1917561-1917580 | MS.gene86339:CDS | 25.0% |
| !! | CTTACATTTTTGTCTCATTA+TGG | + | chr2.3:1919008-1919027 | MS.gene86339:intron | 25.0% |
| !! | TATATCACTTGTTTCAGTTT+TGG | + | chr2.3:1919806-1919825 | MS.gene86339:intron | 25.0% |
| !! | TTCCTTTTATTGCTTTCTTT+GGG | + | chr2.3:1917605-1917624 | MS.gene86339:CDS | 25.0% |
| !!! | AAGTTTCAAGTTGTTTATCA+AGG | + | chr2.3:1918490-1918509 | MS.gene86339:intron | 25.0% |
| !!! | AAGTTTGTTAAAGGGATATT+GGG | + | chr2.3:1918176-1918195 | MS.gene86339:intron | 25.0% |
| !!! | ACTTTATTTTCTAGTAGTCA+AGG | + | chr2.3:1920364-1920383 | MS.gene86339:intron | 25.0% |
| !!! | GTTGTTGTTAAGTTTGTTAA+AGG | + | chr2.3:1918167-1918186 | MS.gene86339:intron | 25.0% |
| !!! | TAAGTTTGTTAAAGGGATAT+TGG | + | chr2.3:1918175-1918194 | MS.gene86339:intron | 25.0% |
| AACAAGGATATCAAATAGCT+AGG | - | chr2.3:1919535-1919554 | None:intergenic | 30.0% | |
| AACATAAAACCAATAGCCAT+AGG | - | chr2.3:1917526-1917545 | None:intergenic | 30.0% | |
| AATCCAAACTTTCCAATAAC+GGG | - | chr2.3:1920097-1920116 | None:intergenic | 30.0% | |
| ACTTCAACACCTAAAAACTT+TGG | - | chr2.3:1917349-1917368 | None:intergenic | 30.0% | |
| ATAAAAGACGAGTACTCATT+CGG | - | chr2.3:1919905-1919924 | None:intergenic | 30.0% | |
| ATCAAAAGGTGAACATGTTT+AGG | - | chr2.3:1917974-1917993 | None:intergenic | 30.0% | |
| CAAGTTGTTTATCAAGGAAT+TGG | + | chr2.3:1918496-1918515 | MS.gene86339:intron | 30.0% | |
| CAATCCAAACTTTCCAATAA+CGG | - | chr2.3:1920098-1920117 | None:intergenic | 30.0% | |
| CTCAAGAAAATTATACCACT+TGG | + | chr2.3:1917376-1917395 | MS.gene86339:CDS | 30.0% | |
| GAAGTTCTTATTGTTTGTGA+AGG | + | chr2.3:1918631-1918650 | MS.gene86339:intron | 30.0% | |
| GTGTTCTACTTGCAATAATA+TGG | + | chr2.3:1918050-1918069 | MS.gene86339:intron | 30.0% | |
| TAGAAAGAGGAATATGATGT+TGG | + | chr2.3:1918391-1918410 | MS.gene86339:intron | 30.0% | |
| TATCTGTTTCCTTTATTGGT+GGG | + | chr2.3:1918878-1918897 | MS.gene86339:CDS | 30.0% | |
| TGATGCAAACTATTAGAAAG+AGG | + | chr2.3:1918378-1918397 | MS.gene86339:intron | 30.0% | |
| TGCTTGCAATTATGAGAATT+TGG | + | chr2.3:1917725-1917744 | MS.gene86339:CDS | 30.0% | |
| TTATCTGTTTCCTTTATTGG+TGG | + | chr2.3:1918877-1918896 | MS.gene86339:CDS | 30.0% | |
| ! | AATGAGTACTCGTCTTTTAT+GGG | + | chr2.3:1919905-1919924 | MS.gene86339:CDS | 30.0% |
| ! | ACTGAGAAACCAAAGTTTTT+AGG | + | chr2.3:1917337-1917356 | MS.gene86339:CDS | 30.0% |
| ! | CTAATAGTTTGCATCATGAA+AGG | - | chr2.3:1918374-1918393 | None:intergenic | 30.0% |
| ! | GTGTTAAAATTTCTTGCTGT+AGG | + | chr2.3:1920693-1920712 | MS.gene86339:intron | 30.0% |
| ! | GTTCCTTTTATTGCTTTCTT+TGG | + | chr2.3:1917604-1917623 | MS.gene86339:CDS | 30.0% |
| ! | TCATTCCAATTTTATCGGAT+AGG | + | chr2.3:1919123-1919142 | MS.gene86339:intron | 30.0% |
| ! | TCCTTTTATTGCTTTCTTTG+GGG | + | chr2.3:1917606-1917625 | MS.gene86339:CDS | 30.0% |
| ! | TGTGATTTCTGTTCTGTTTT+GGG | + | chr2.3:1917792-1917811 | MS.gene86339:CDS | 30.0% |
| ! | TTCACCCATGTTTTCAAAAA+AGG | - | chr2.3:1917499-1917518 | None:intergenic | 30.0% |
| ! | TTGTGATTTCTGTTCTGTTT+TGG | + | chr2.3:1917791-1917810 | MS.gene86339:CDS | 30.0% |
| ! | TTTTTGTAAGCTCTCCAAAA+CGG | - | chr2.3:1920470-1920489 | None:intergenic | 30.0% |
| !! | AATGCTCATCATTGCTTTTA+GGG | - | chr2.3:1918838-1918857 | None:intergenic | 30.0% |
| !! | CAAATACTTTTCTAGTCTGA+GGG | + | chr2.3:1918776-1918795 | MS.gene86339:CDS | 30.0% |
| !! | TCAAATACTTTTCTAGTCTG+AGG | + | chr2.3:1918775-1918794 | MS.gene86339:CDS | 30.0% |
| AAAGCCTGAACAACTACTTA+TGG | - | chr2.3:1918591-1918610 | None:intergenic | 35.0% | |
| AACTTCATGATGAGCTAGTT+CGG | - | chr2.3:1918617-1918636 | None:intergenic | 35.0% | |
| AATTGTTCACCCACCAATAA+AGG | - | chr2.3:1918890-1918909 | None:intergenic | 35.0% | |
| ACATCGTTATGGATTCTTTC+AGG | + | chr2.3:1919636-1919655 | MS.gene86339:intron | 35.0% | |
| ACTGAGAATGAAGATGAAGA+TGG | + | chr2.3:1920973-1920992 | MS.gene86339:CDS | 35.0% | |
| AGATACATGCTATCATGTGA+CGG | + | chr2.3:1918317-1918336 | MS.gene86339:intron | 35.0% | |
| AGCTAATTCAACTCCATACT+TGG | + | chr2.3:1920813-1920832 | MS.gene86339:CDS | 35.0% | |
| ATGAGCAACTATATGGACAA+TGG | - | chr2.3:1918972-1918991 | None:intergenic | 35.0% | |
| ATTTGATCCGTGCAAAGAAA+TGG | + | chr2.3:1920189-1920208 | MS.gene86339:CDS | 35.0% | |
| CAAAAAAACATCATCCCAAG+TGG | - | chr2.3:1917394-1917413 | None:intergenic | 35.0% | |
| CAGGAGATGTAACAAATGAA+TGG | - | chr2.3:1920421-1920440 | None:intergenic | 35.0% | |
| CAGTACAATGAGCAACTATA+TGG | - | chr2.3:1918979-1918998 | None:intergenic | 35.0% | |
| CGGATCAAATAAACTGTACT+TGG | - | chr2.3:1920179-1920198 | None:intergenic | 35.0% | |
| GATAACCTTCTTAGTATCCT+TGG | + | chr2.3:1917685-1917704 | MS.gene86339:CDS | 35.0% | |
| GCTAATTCAACTCCATACTT+GGG | + | chr2.3:1920814-1920833 | MS.gene86339:CDS | 35.0% | |
| GTTTCCATAAGTAGTTGTTC+AGG | + | chr2.3:1918584-1918603 | MS.gene86339:intron | 35.0% | |
| TAAAAGACGAGTACTCATTC+GGG | - | chr2.3:1919904-1919923 | None:intergenic | 35.0% | |
| TACTGCTATAAACACCTGTA+AGG | + | chr2.3:1920444-1920463 | MS.gene86339:intron | 35.0% | |
| TAGCTAGTGAACCAAAAGTT+AGG | - | chr2.3:1920798-1920817 | None:intergenic | 35.0% | |
| TCACCTGCTTCTGTATATAA+AGG | - | chr2.3:1921009-1921028 | None:intergenic | 35.0% | |
| TCCATCCTATCCGATAAAAT+TGG | - | chr2.3:1919131-1919150 | None:intergenic | 35.0% | |
| TGAGACAAAAATGTAAGCAG+TGG | - | chr2.3:1919005-1919024 | None:intergenic | 35.0% | |
| TTATGTCATGGCTGAATTGT+GGG | + | chr2.3:1917762-1917781 | MS.gene86339:CDS | 35.0% | |
| TTTATGTCATGGCTGAATTG+TGG | + | chr2.3:1917761-1917780 | MS.gene86339:CDS | 35.0% | |
| ! | AAGCTATTCTAGAGAGATTG+CGG | - | chr2.3:1920532-1920551 | None:intergenic | 35.0% |
| ! | AATTTCTTGCTGTAGGTCAA+AGG | + | chr2.3:1920700-1920719 | MS.gene86339:intron | 35.0% |
| ! | AGCTTTCTAGTCTTCGATTT+CGG | - | chr2.3:1919364-1919383 | None:intergenic | 35.0% |
| ! | ATGTAGTACTGAACAACTGA+TGG | + | chr2.3:1919396-1919415 | MS.gene86339:intron | 35.0% |
| ! | ATTTCTTGCTGTAGGTCAAA+GGG | + | chr2.3:1920701-1920720 | MS.gene86339:intron | 35.0% |
| ! | CAGTTCATGATCCTAACTTT+TGG | + | chr2.3:1920784-1920803 | MS.gene86339:CDS | 35.0% |
| ! | CTTGCTGAATATGTTTTGCA+AGG | - | chr2.3:1920152-1920171 | None:intergenic | 35.0% |
| ! | GAATGAGTACTCGTCTTTTA+TGG | + | chr2.3:1919904-1919923 | MS.gene86339:CDS | 35.0% |
| ! | GTGATTTCTGTTCTGTTTTG+GGG | + | chr2.3:1917793-1917812 | MS.gene86339:CDS | 35.0% |
| ! | TCCAATTTTATCGGATAGGA+TGG | + | chr2.3:1919127-1919146 | MS.gene86339:intron | 35.0% |
| !! | AGATTCAGATGGACTAATGA+AGG | - | chr2.3:1921034-1921053 | None:intergenic | 35.0% |
| !! | CAATGCTCATCATTGCTTTT+AGG | - | chr2.3:1918839-1918858 | None:intergenic | 35.0% |
| !! | TGATGGTGAATCAGTTTTTG+AGG | + | chr2.3:1917306-1917325 | MS.gene86339:CDS | 35.0% |
| !! | TGATTTCTGTTCTGTTTTGG+GGG | + | chr2.3:1917794-1917813 | MS.gene86339:CDS | 35.0% |
| !! | TTTTGGTGATTGTTCTTGCA+TGG | + | chr2.3:1920845-1920864 | MS.gene86339:CDS | 35.0% |
| AAACTGAGTGTCAAGTGACT+TGG | - | chr2.3:1920881-1920900 | None:intergenic | 40.0% | |
| AACATGGGTGAATCTTCCTA+TGG | + | chr2.3:1917507-1917526 | MS.gene86339:CDS | 40.0% | |
| AACCCATTAGGAAAATCTGG+TGG | + | chr2.3:1920748-1920767 | MS.gene86339:CDS | 40.0% | |
| AAGCGATTCTATCCACTGTT+TGG | + | chr2.3:1918711-1918730 | MS.gene86339:CDS | 40.0% | |
| AATGTTGCCCTTGTATTCTC+CGG | + | chr2.3:1918744-1918763 | MS.gene86339:CDS | 40.0% | |
| AATTCAACTCCATACTTGGG+AGG | + | chr2.3:1920817-1920836 | MS.gene86339:CDS | 40.0% | |
| ACATATACAGCAGCTAGCAA+TGG | - | chr2.3:1920124-1920143 | None:intergenic | 40.0% | |
| ACTAGAAAGCTAGCAGAGTA+TGG | + | chr2.3:1919373-1919392 | MS.gene86339:intron | 40.0% | |
| ACTTCATGATGAGCTAGTTC+GGG | - | chr2.3:1918616-1918635 | None:intergenic | 40.0% | |
| AGAAGAACTCGAGAAAGAGT+TGG | + | chr2.3:1920918-1920937 | MS.gene86339:CDS | 40.0% | |
| AGGTTATCAGCAAATGCTTG+AGG | - | chr2.3:1917673-1917692 | None:intergenic | 40.0% | |
| ATGTAGGCCATTTCTTTGCA+CGG | - | chr2.3:1920199-1920218 | None:intergenic | 40.0% | |
| GAAATCAAAGCTCAAAGCTC+AGG | + | chr2.3:1919780-1919799 | MS.gene86339:CDS | 40.0% | |
| GAAGAGAAGAGTTCAAACCT+TGG | - | chr2.3:1920239-1920258 | None:intergenic | 40.0% | |
| GATGTTGTATGCAACCCATT+AGG | + | chr2.3:1920736-1920755 | MS.gene86339:CDS | 40.0% | |
| GCACCTTTATATACAGAAGC+AGG | + | chr2.3:1921003-1921022 | MS.gene86339:CDS | 40.0% | |
| GCCCCAAAGAAAGCAATAAA+AGG | - | chr2.3:1917610-1917629 | None:intergenic | 40.0% | |
| GGAAAGAGAAACTGCTGTTA+AGG | + | chr2.3:1920939-1920958 | MS.gene86339:CDS | 40.0% | |
| GGGTGAATATAGTTGCTAAG+AGG | - | chr2.3:1917652-1917671 | None:intergenic | 40.0% | |
| GGTGTTTATAGCAGTAGTTC+AGG | - | chr2.3:1920440-1920459 | None:intergenic | 40.0% | |
| GGTTATCAGCAAATGCTTGA+GGG | - | chr2.3:1917672-1917691 | None:intergenic | 40.0% | |
| GTGAATCTTCCTATGGCTAT+TGG | + | chr2.3:1917514-1917533 | MS.gene86339:CDS | 40.0% | |
| TATGTCATGGCTGAATTGTG+GGG | + | chr2.3:1917763-1917782 | MS.gene86339:CDS | 40.0% | |
| TCCATATGCAACCACTAATG+TGG | - | chr2.3:1919731-1919750 | None:intergenic | 40.0% | |
| TCTAGTCTGAGGGAAACTTT+AGG | + | chr2.3:1918786-1918805 | MS.gene86339:CDS | 40.0% | |
| TCTTCATTCTCAGTCAACAC+TGG | - | chr2.3:1920967-1920986 | None:intergenic | 40.0% | |
| TGCAACCCATTAGGAAAATC+TGG | + | chr2.3:1920745-1920764 | MS.gene86339:CDS | 40.0% | |
| TGGGTTGCATACAACATCAA+TGG | - | chr2.3:1920734-1920753 | None:intergenic | 40.0% | |
| TTCGATTTCGGTTAAGCAGT+GGG | - | chr2.3:1919352-1919371 | None:intergenic | 40.0% | |
| TTCTATCCACTGTTTGGACT+TGG | + | chr2.3:1918717-1918736 | MS.gene86339:CDS | 40.0% | |
| TTGCTAGCTGCTGTATATGT+TGG | + | chr2.3:1920124-1920143 | MS.gene86339:CDS | 40.0% | |
| TTTCAGGAGAAGCCGAAAAT+GGG | + | chr2.3:1919652-1919671 | MS.gene86339:intron | 40.0% | |
| ! | AAAGTATTTGACTGTCCGAC+CGG | - | chr2.3:1918766-1918785 | None:intergenic | 40.0% |
| ! | AATTTCCAGAGGTGTGTATG+AGG | - | chr2.3:1919867-1919886 | None:intergenic | 40.0% |
| ! | ACAACTGATGGAAAGCATAC+AGG | + | chr2.3:1919408-1919427 | MS.gene86339:intron | 40.0% |
| ! | ATGAGCATTGTTGTCGGTAT+GGG | + | chr2.3:1918849-1918868 | MS.gene86339:CDS | 40.0% |
| ! | ATTTCCAGAGGTGTGTATGA+GGG | - | chr2.3:1919866-1919885 | None:intergenic | 40.0% |
| ! | CACCACCAGATTTTCCTAAT+GGG | - | chr2.3:1920753-1920772 | None:intergenic | 40.0% |
| ! | CTCTCCATTGTTCCCATTTT+CGG | - | chr2.3:1919667-1919686 | None:intergenic | 40.0% |
| ! | GCAATGATGAGCATTGTTGT+CGG | + | chr2.3:1918843-1918862 | MS.gene86339:CDS | 40.0% |
| !! | CATCATTGCTTTTAGGGAGA+TGG | - | chr2.3:1918832-1918851 | None:intergenic | 40.0% |
| !! | TGGAGTATTAAGGCCTTGTT+TGG | - | chr2.3:1920627-1920646 | None:intergenic | 40.0% |
| !!! | ATTGCTTTCTTTGGGGCTTT+TGG | + | chr2.3:1917613-1917632 | MS.gene86339:CDS | 40.0% |
| !!! | TTGCTTTCTTTGGGGCTTTT+GGG | + | chr2.3:1917614-1917633 | MS.gene86339:CDS | 40.0% |
| AACCAACTCCAGTCATAAGC+AGG | - | chr2.3:1920039-1920058 | None:intergenic | 45.0% | |
| AACCTTGGTATCCTCATCCA+AGG | - | chr2.3:1920224-1920243 | None:intergenic | 45.0% | |
| AACTCCAGTCATAAGCAGGA+CGG | - | chr2.3:1920035-1920054 | None:intergenic | 45.0% | |
| AAGGGATCTTGCCACATTAG+TGG | + | chr2.3:1919717-1919736 | MS.gene86339:CDS | 45.0% | |
| ACCTTGGTATCCTCATCCAA+GGG | - | chr2.3:1920223-1920242 | None:intergenic | 45.0% | |
| ACTTTAGGTCCTGGAGTTGA+TGG | + | chr2.3:1918801-1918820 | MS.gene86339:CDS | 45.0% | |
| AGAAATGGCCTACATACCCT+TGG | + | chr2.3:1920204-1920223 | MS.gene86339:CDS | 45.0% | |
| ATACAGGATCTGTCCCTGAA+GGG | + | chr2.3:1919424-1919443 | MS.gene86339:intron | 45.0% | |
| ATGGTGCAAGTTAGCACGAA+AGG | - | chr2.3:1919458-1919477 | None:intergenic | 45.0% | |
| ATGTCATGGCTGAATTGTGG+GGG | + | chr2.3:1917764-1917783 | MS.gene86339:CDS | 45.0% | |
| CCAGCTAAACGATACCCAAA+TGG | + | chr2.3:1919320-1919339 | MS.gene86339:intron | 45.0% | |
| CGTTTAGCTGGCTAAGTTGT+CGG | - | chr2.3:1919311-1919330 | None:intergenic | 45.0% | |
| CTACTACACCACACTACACT+CGG | - | chr2.3:1919210-1919229 | None:intergenic | 45.0% | |
| CTTCGATTTCGGTTAAGCAG+TGG | - | chr2.3:1919353-1919372 | None:intergenic | 45.0% | |
| CTTTCAGGAGAAGCCGAAAA+TGG | + | chr2.3:1919651-1919670 | MS.gene86339:intron | 45.0% | |
| GAAGCCGAAAATGGGAACAA+TGG | + | chr2.3:1919660-1919679 | MS.gene86339:CDS | 45.0% | |
| GAATCGCTTTGCCTCATCAA+CGG | - | chr2.3:1918700-1918719 | None:intergenic | 45.0% | |
| GCACCCGTTATTGGAAAGTT+TGG | + | chr2.3:1920091-1920110 | MS.gene86339:CDS | 45.0% | |
| GCCACATTAGTGGTTGCATA+TGG | + | chr2.3:1919727-1919746 | MS.gene86339:CDS | 45.0% | |
| GCTTACAAGCATCATCGTGA+AGG | - | chr2.3:1919960-1919979 | None:intergenic | 45.0% | |
| GGAAACTGCACAATTTCCAG+AGG | - | chr2.3:1919878-1919897 | None:intergenic | 45.0% | |
| GGAGAATACAAGGGCAACAT+TGG | - | chr2.3:1918745-1918764 | None:intergenic | 45.0% | |
| GTGTAGTAGTTGGCACTTCT+AGG | + | chr2.3:1919221-1919240 | MS.gene86339:intron | 45.0% | |
| GTGTAGTGTGGTGTAGTAGT+TGG | + | chr2.3:1919211-1919230 | MS.gene86339:intron | 45.0% | |
| TCGATTTCGGTTAAGCAGTG+GGG | - | chr2.3:1919351-1919370 | None:intergenic | 45.0% | |
| TTCTTAGTATCCTTGGACCG+CGG | + | chr2.3:1917692-1917711 | MS.gene86339:CDS | 45.0% | |
| ! | AAAAGCACACCTCCCAAGTA+TGG | - | chr2.3:1920829-1920848 | None:intergenic | 45.0% |
| ! | AAACACCTGTAAGGCCGTTT+TGG | + | chr2.3:1920453-1920472 | MS.gene86339:intron | 45.0% |
| ! | AAAGGCAAAGTGTCCCTTCA+GGG | - | chr2.3:1919440-1919459 | None:intergenic | 45.0% |
| ! | ATCCTCATCCAAGGGTATGT+AGG | - | chr2.3:1920215-1920234 | None:intergenic | 45.0% |
| ! | CCATTTGGGTATCGTTTAGC+TGG | - | chr2.3:1919323-1919342 | None:intergenic | 45.0% |
| ! | GATGAGCATTGTTGTCGGTA+TGG | + | chr2.3:1918848-1918867 | MS.gene86339:CDS | 45.0% |
| ! | GCACCACCAGATTTTCCTAA+TGG | - | chr2.3:1920754-1920773 | None:intergenic | 45.0% |
| ! | GTTCTTGTTGTGACTGCTAG+AGG | + | chr2.3:1917454-1917473 | MS.gene86339:CDS | 45.0% |
| ! | TCCAGTTGTTTGGGGTACTA+CGG | + | chr2.3:1919267-1919286 | MS.gene86339:intron | 45.0% |
| !! | ATACTTGGGAGGTGTGCTTT+TGG | + | chr2.3:1920828-1920847 | MS.gene86339:CDS | 45.0% |
| !! | CTTTTTCTTCTGGCTACGAG+CGG | - | chr2.3:1918925-1918944 | None:intergenic | 45.0% |
| !! | TTTTTCTTCTGGCTACGAGC+GGG | - | chr2.3:1918924-1918943 | None:intergenic | 45.0% |
| AAAGCTGAAGCAGCTTCTGC+TGG | + | chr2.3:1917280-1917299 | MS.gene86339:CDS | 50.0% | |
| ACATGCTATCATGTGACGGC+TGG | + | chr2.3:1918321-1918340 | MS.gene86339:intron | 50.0% | |
| ACCCTTGGATGAGGATACCA+AGG | + | chr2.3:1920219-1920238 | MS.gene86339:CDS | 50.0% | |
| ACTGGACCACTCCAGTTGTT+TGG | + | chr2.3:1919257-1919276 | MS.gene86339:intron | 50.0% | |
| AGCAGTGGGGTTTGACCATT+TGG | - | chr2.3:1919338-1919357 | None:intergenic | 50.0% | |
| AGTACCCCAAACAACTGGAG+TGG | - | chr2.3:1919266-1919285 | None:intergenic | 50.0% | |
| CATACAGGATCTGTCCCTGA+AGG | + | chr2.3:1919423-1919442 | MS.gene86339:intron | 50.0% | |
| CGCTCGTAGCCAGAAGAAAA+AGG | + | chr2.3:1918923-1918942 | MS.gene86339:CDS | 50.0% | |
| CTGAGGGAAACTTTAGGTCC+TGG | + | chr2.3:1918792-1918811 | MS.gene86339:CDS | 50.0% | |
| CTGGACCACTCCAGTTGTTT+GGG | + | chr2.3:1919258-1919277 | MS.gene86339:intron | 50.0% | |
| GAAGGTAGCGATTCCAGTTG+CGG | - | chr2.3:1919942-1919961 | None:intergenic | 50.0% | |
| GCAGATAACCACCGTTGATG+AGG | + | chr2.3:1918686-1918705 | MS.gene86339:intron | 50.0% | |
| GCAGTGGGGTTTGACCATTT+GGG | - | chr2.3:1919337-1919356 | None:intergenic | 50.0% | |
| GCGGTCCAAGGATACTAAGA+AGG | - | chr2.3:1917693-1917712 | None:intergenic | 50.0% | |
| GTCCTGCTTATGACTGGAGT+TGG | + | chr2.3:1920034-1920053 | MS.gene86339:CDS | 50.0% | |
| TCCGTAGTACCCCAAACAAC+TGG | - | chr2.3:1919271-1919290 | None:intergenic | 50.0% | |
| TGGACCACTCCAGTTGTTTG+GGG | + | chr2.3:1919259-1919278 | MS.gene86339:intron | 50.0% | |
| TGTCCGACCGGAGAATACAA+GGG | - | chr2.3:1918754-1918773 | None:intergenic | 50.0% | |
| TTCTCCCTCATACACACCTC+TGG | + | chr2.3:1919859-1919878 | MS.gene86339:intron | 50.0% | |
| TTCTTCTTCGCGACGCAATG+CGG | - | chr2.3:1920905-1920924 | None:intergenic | 50.0% | |
| TTGCCCTTGTATTCTCCGGT+CGG | + | chr2.3:1918748-1918767 | MS.gene86339:CDS | 50.0% | |
| TTGGCTCCAAGTCCAAACAG+TGG | - | chr2.3:1918726-1918745 | None:intergenic | 50.0% | |
| ! | CTTGCTGTAGGTCAAAGGGA+AGG | + | chr2.3:1920705-1920724 | MS.gene86339:intron | 50.0% |
| ! | GAAAGGCAAAGTGTCCCTTC+AGG | - | chr2.3:1919441-1919460 | None:intergenic | 50.0% |
| ! | GCTAAGTTGTCGGCTGTCAT+TGG | - | chr2.3:1919301-1919320 | None:intergenic | 50.0% |
| !! | AGGTCCTGGAGTTGATGGTT+GGG | + | chr2.3:1918806-1918825 | MS.gene86339:CDS | 50.0% |
| !! | TAGGTCCTGGAGTTGATGGT+TGG | + | chr2.3:1918805-1918824 | MS.gene86339:CDS | 50.0% |
| !! | TTTCCAATAACGGGTGCGAG+TGG | - | chr2.3:1920088-1920107 | None:intergenic | 50.0% |
| AACTGGAGTGGTCCAGTAGC+TGG | - | chr2.3:1919254-1919273 | None:intergenic | 55.0% | |
| AAGCTCCCTTCACTCTGCCA+GGG | + | chr2.3:1919150-1919169 | MS.gene86339:intron | 55.0% | |
| ACTGGAGTGGTCCAGTAGCT+GGG | - | chr2.3:1919253-1919272 | None:intergenic | 55.0% | |
| AGTGGTCCAGTAGCTGGGAA+GGG | - | chr2.3:1919248-1919267 | None:intergenic | 55.0% | |
| ATCCTTGGACCGCGGTTTCT+TGG | + | chr2.3:1917700-1917719 | MS.gene86339:CDS | 55.0% | |
| ATGGCCCAACCATCAACTCC+AGG | - | chr2.3:1918813-1918832 | None:intergenic | 55.0% | |
| CCAGTCATAAGCAGGACGGT+AGG | - | chr2.3:1920031-1920050 | None:intergenic | 55.0% | |
| CCTACCGTCCTGCTTATGAC+TGG | + | chr2.3:1920028-1920047 | MS.gene86339:CDS | 55.0% | |
| CTGTCCGACCGGAGAATACA+AGG | - | chr2.3:1918755-1918774 | None:intergenic | 55.0% | |
| GACGAGTACTCATTCGGGCT+AGG | - | chr2.3:1919899-1919918 | None:intergenic | 55.0% | |
| GATCCACTCGCACCCGTTAT+TGG | + | chr2.3:1920082-1920101 | MS.gene86339:CDS | 55.0% | |
| GCAAGCAGACCAAGAAACCG+CGG | - | chr2.3:1917712-1917731 | None:intergenic | 55.0% | |
| GCTCTCCAAAACGGCCTTAC+AGG | - | chr2.3:1920461-1920480 | None:intergenic | 55.0% | |
| GGCCTACATACCCTTGGATG+AGG | + | chr2.3:1920210-1920229 | MS.gene86339:CDS | 55.0% | |
| GGCGATTTCTCAACCGCAAC+TGG | + | chr2.3:1919926-1919945 | MS.gene86339:CDS | 55.0% | |
| GTGTAGAGCCGAGTGTAGTG+TGG | + | chr2.3:1919199-1919218 | MS.gene86339:intron | 55.0% | |
| TCGCTTTGCCTCATCAACGG+TGG | - | chr2.3:1918697-1918716 | None:intergenic | 55.0% | |
| ! | TGTCGGCTGTCATTGGCAGA+GGG | - | chr2.3:1919294-1919313 | None:intergenic | 55.0% |
| ! | TTGTCGGCTGTCATTGGCAG+AGG | - | chr2.3:1919295-1919314 | None:intergenic | 55.0% |
| !!! | GTTTTGGGGGCTTGCCAATC+AGG | + | chr2.3:1917807-1917826 | MS.gene86339:CDS | 55.0% |
| ACTCTGCCAGGGACTGGACA+GGG | + | chr2.3:1919161-1919180 | MS.gene86339:intron | 60.0% | |
| CCAGTCCCTGGCAGAGTGAA+GGG | - | chr2.3:1919158-1919177 | None:intergenic | 60.0% | |
| GAAGCTCCCTTCACTCTGCC+AGG | + | chr2.3:1919149-1919168 | MS.gene86339:intron | 60.0% | |
| GACCAAGAAACCGCGGTCCA+AGG | - | chr2.3:1917705-1917724 | None:intergenic | 60.0% | |
| GAGTGGTCCAGTAGCTGGGA+AGG | - | chr2.3:1919249-1919268 | None:intergenic | 60.0% | |
| GCTGAAGCAGCTTCTGCTGG+TGG | + | chr2.3:1917283-1917302 | MS.gene86339:CDS | 60.0% | |
| GTGGTCCAGTAGCTGGGAAG+GGG | - | chr2.3:1919247-1919266 | None:intergenic | 60.0% | |
| TCCAGTCCCTGGCAGAGTGA+AGG | - | chr2.3:1919159-1919178 | None:intergenic | 60.0% | |
| ! | GCAGCTTCTGCTGGTGGTGA+TGG | + | chr2.3:1917289-1917308 | MS.gene86339:CDS | 60.0% |
| ! | TTCTGGCTACGAGCGGGAAG+AGG | - | chr2.3:1918918-1918937 | None:intergenic | 60.0% |
| CACTCTGCCAGGGACTGGAC+AGG | + | chr2.3:1919160-1919179 | MS.gene86339:intron | 65.0% | |
| CCCTTCACTCTGCCAGGGAC+TGG | + | chr2.3:1919155-1919174 | MS.gene86339:intron | 65.0% | |
| CTAGGCCCCTTCCCAGCTAC+TGG | + | chr2.3:1919239-1919258 | MS.gene86339:intron | 65.0% | |
| CTCTGCCAGGGACTGGACAG+GGG | + | chr2.3:1919162-1919181 | MS.gene86339:intron | 65.0% | |
| GCTAACCCCTGTCCAGTCCC+TGG | - | chr2.3:1919170-1919189 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 1917268 | 1921056 | 1917268 | ID=MS.gene86339 |
| chr2.3 | mRNA | 1917268 | 1921056 | 1917268 | ID=MS.gene86339.t1;Parent=MS.gene86339 |
| chr2.3 | exon | 1917268 | 1917828 | 1917268 | ID=MS.gene86339.t1.exon1;Parent=MS.gene86339.t1 |
| chr2.3 | CDS | 1917268 | 1917828 | 1917268 | ID=cds.MS.gene86339.t1;Parent=MS.gene86339.t1 |
| chr2.3 | exon | 1918690 | 1918944 | 1918690 | ID=MS.gene86339.t1.exon2;Parent=MS.gene86339.t1 |
| chr2.3 | CDS | 1918690 | 1918944 | 1918690 | ID=cds.MS.gene86339.t1;Parent=MS.gene86339.t1 |
| chr2.3 | exon | 1919658 | 1919801 | 1919658 | ID=MS.gene86339.t1.exon3;Parent=MS.gene86339.t1 |
| chr2.3 | CDS | 1919658 | 1919801 | 1919658 | ID=cds.MS.gene86339.t1;Parent=MS.gene86339.t1 |
| chr2.3 | exon | 1919893 | 1920240 | 1919893 | ID=MS.gene86339.t1.exon4;Parent=MS.gene86339.t1 |
| chr2.3 | CDS | 1919893 | 1920240 | 1919893 | ID=cds.MS.gene86339.t1;Parent=MS.gene86339.t1 |
| chr2.3 | exon | 1920715 | 1921056 | 1920715 | ID=MS.gene86339.t1.exon5;Parent=MS.gene86339.t1 |
| chr2.3 | CDS | 1920715 | 1921056 | 1920715 | ID=cds.MS.gene86339.t1;Parent=MS.gene86339.t1 |
| Gene Sequence |
| Protein sequence |
