Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87631.t1 | XP_003605914.1 | 98.1 | 519 | 10 | 0 | 1 | 519 | 1 | 519 | 4.30E-277 | 963.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87631.t1 | Q9LVD9 | 73.8 | 507 | 122 | 2 | 11 | 517 | 9 | 504 | 1.8e-207 | 723.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87631.t1 | G7JDH9 | 98.1 | 519 | 10 | 0 | 1 | 519 | 1 | 519 | 3.1e-277 | 963.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049400 | MS.gene87631 | -0.836844 | 7.37E-57 | -1.69E-46 |
MS.gene050680 | MS.gene87631 | 0.816549 | 5.22E-52 | -1.69E-46 |
MS.gene051368 | MS.gene87631 | 0.80481 | 1.81E-49 | -1.69E-46 |
MS.gene051568 | MS.gene87631 | 0.813072 | 3.08E-51 | -1.69E-46 |
MS.gene051983 | MS.gene87631 | 0.801176 | 1.02E-48 | -1.69E-46 |
MS.gene052011 | MS.gene87631 | -0.813229 | 2.85E-51 | -1.69E-46 |
MS.gene05212 | MS.gene87631 | -0.836011 | 1.20E-56 | -1.69E-46 |
MS.gene052159 | MS.gene87631 | 0.808092 | 3.67E-50 | -1.69E-46 |
MS.gene052190 | MS.gene87631 | 0.823903 | 1.08E-53 | -1.69E-46 |
MS.gene052333 | MS.gene87631 | 0.876701 | 1.13E-68 | -1.69E-46 |
MS.gene052353 | MS.gene87631 | 0.809092 | 2.24E-50 | -1.69E-46 |
MS.gene052389 | MS.gene87631 | 0.805637 | 1.21E-49 | -1.69E-46 |
MS.gene053166 | MS.gene87631 | 0.810711 | 1.01E-50 | -1.69E-46 |
MS.gene053176 | MS.gene87631 | 0.818674 | 1.73E-52 | -1.69E-46 |
MS.gene054183 | MS.gene87631 | 0.848046 | 7.86E-60 | -1.69E-46 |
MS.gene054548 | MS.gene87631 | 0.806665 | 7.37E-50 | -1.69E-46 |
MS.gene054559 | MS.gene87631 | 0.828616 | 8.14E-55 | -1.69E-46 |
MS.gene055217 | MS.gene87631 | 0.819528 | 1.11E-52 | -1.69E-46 |
MS.gene055356 | MS.gene87631 | 0.837194 | 6.00E-57 | -1.69E-46 |
MS.gene055358 | MS.gene87631 | 0.816733 | 4.75E-52 | -1.69E-46 |
MS.gene055367 | MS.gene87631 | 0.863472 | 2.43E-64 | -1.69E-46 |
MS.gene055455 | MS.gene87631 | -0.803556 | 3.30E-49 | -1.69E-46 |
MS.gene05553 | MS.gene87631 | 0.811447 | 6.97E-51 | -1.69E-46 |
MS.gene055701 | MS.gene87631 | 0.846578 | 1.99E-59 | -1.69E-46 |
MS.gene05595 | MS.gene87631 | 0.832528 | 8.98E-56 | -1.69E-46 |
MS.gene056723 | MS.gene87631 | 0.834545 | 2.82E-56 | -1.69E-46 |
MS.gene057156 | MS.gene87631 | -0.848452 | 6.07E-60 | -1.69E-46 |
MS.gene057863 | MS.gene87631 | 0.801757 | 7.75E-49 | -1.69E-46 |
MS.gene058935 | MS.gene87631 | 0.800253 | 1.57E-48 | -1.69E-46 |
MS.gene059247 | MS.gene87631 | 0.81086 | 9.34E-51 | -1.69E-46 |
MS.gene059420 | MS.gene87631 | 0.81012 | 1.35E-50 | -1.69E-46 |
MS.gene059609 | MS.gene87631 | 0.820139 | 8.03E-53 | -1.69E-46 |
MS.gene059868 | MS.gene87631 | 0.842611 | 2.33E-58 | -1.69E-46 |
MS.gene059958 | MS.gene87631 | 0.841058 | 5.98E-58 | -1.69E-46 |
MS.gene061114 | MS.gene87631 | -0.852745 | 3.77E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87631.t1 | MTR_4g048000 | 98.266 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1023 |
MS.gene87631.t1 | MTR_2g088400 | 79.572 | 514 | 91 | 2 | 8 | 519 | 6 | 507 | 0.0 | 822 |
MS.gene87631.t1 | MTR_2g088400 | 80.172 | 464 | 78 | 2 | 8 | 469 | 6 | 457 | 0.0 | 741 |
MS.gene87631.t1 | MTR_2g022980 | 66.667 | 489 | 159 | 1 | 23 | 511 | 11 | 495 | 0.0 | 678 |
MS.gene87631.t1 | MTR_8g069470 | 52.009 | 448 | 214 | 1 | 65 | 512 | 51 | 497 | 8.26e-163 | 472 |
MS.gene87631.t1 | MTR_5g033100 | 51.441 | 451 | 218 | 1 | 64 | 514 | 56 | 505 | 1.30e-153 | 449 |
MS.gene87631.t1 | MTR_1g021740 | 47.505 | 501 | 241 | 4 | 11 | 511 | 3 | 481 | 7.14e-153 | 446 |
MS.gene87631.t1 | MTR_5g032720 | 45.679 | 486 | 253 | 3 | 42 | 517 | 5 | 489 | 2.40e-149 | 437 |
MS.gene87631.t1 | MTR_5g090290 | 46.951 | 492 | 259 | 2 | 17 | 508 | 1 | 490 | 3.88e-147 | 434 |
MS.gene87631.t1 | MTR_7g087400 | 47.357 | 454 | 237 | 1 | 56 | 509 | 22 | 473 | 9.29e-140 | 412 |
MS.gene87631.t1 | MTR_7g087410 | 47.020 | 453 | 238 | 2 | 63 | 515 | 30 | 480 | 4.53e-139 | 410 |
MS.gene87631.t1 | MTR_3g099700 | 46.947 | 475 | 237 | 4 | 36 | 509 | 31 | 491 | 5.79e-139 | 410 |
MS.gene87631.t1 | MTR_5g032750 | 44.491 | 481 | 256 | 3 | 39 | 509 | 2 | 481 | 3.89e-134 | 398 |
MS.gene87631.t1 | MTR_1g100180 | 45.905 | 464 | 249 | 1 | 56 | 519 | 35 | 496 | 4.17e-134 | 398 |
MS.gene87631.t1 | MTR_8g063590 | 44.375 | 480 | 264 | 3 | 36 | 514 | 27 | 504 | 1.01e-133 | 397 |
MS.gene87631.t1 | MTR_6g027200 | 47.300 | 463 | 241 | 2 | 48 | 509 | 20 | 480 | 5.50e-130 | 387 |
MS.gene87631.t1 | MTR_7g087430 | 49.227 | 388 | 196 | 1 | 123 | 510 | 1 | 387 | 5.50e-129 | 382 |
MS.gene87631.t1 | MTR_7g087410 | 48.346 | 393 | 201 | 2 | 123 | 515 | 1 | 391 | 2.14e-125 | 372 |
MS.gene87631.t1 | MTR_6g027190 | 45.877 | 473 | 245 | 3 | 56 | 519 | 16 | 486 | 2.42e-122 | 368 |
MS.gene87631.t1 | MTR_3g099720 | 42.105 | 456 | 261 | 2 | 60 | 515 | 37 | 489 | 8.54e-121 | 363 |
MS.gene87631.t1 | MTR_7g087370 | 42.975 | 484 | 241 | 4 | 34 | 515 | 2 | 452 | 1.50e-120 | 362 |
MS.gene87631.t1 | MTR_5g087930 | 44.374 | 471 | 231 | 5 | 34 | 503 | 5 | 445 | 3.99e-119 | 358 |
MS.gene87631.t1 | MTR_6g047610 | 38.415 | 492 | 286 | 4 | 21 | 512 | 2 | 476 | 2.24e-117 | 355 |
MS.gene87631.t1 | MTR_6g081410 | 41.099 | 455 | 265 | 2 | 65 | 517 | 26 | 479 | 3.39e-116 | 352 |
MS.gene87631.t1 | MTR_6g081780 | 40.991 | 444 | 260 | 1 | 65 | 506 | 26 | 469 | 5.35e-114 | 346 |
MS.gene87631.t1 | MTR_1g108810 | 41.609 | 435 | 254 | 0 | 65 | 499 | 35 | 469 | 8.77e-113 | 343 |
MS.gene87631.t1 | MTR_7g082810 | 38.013 | 463 | 287 | 0 | 57 | 519 | 13 | 475 | 4.73e-107 | 328 |
MS.gene87631.t1 | MTR_6g004220 | 36.632 | 475 | 296 | 3 | 48 | 517 | 3 | 477 | 2.73e-106 | 326 |
MS.gene87631.t1 | MTR_6g066380 | 38.914 | 442 | 268 | 1 | 67 | 506 | 30 | 471 | 2.10e-105 | 324 |
MS.gene87631.t1 | MTR_6g047640 | 36.585 | 492 | 296 | 3 | 22 | 513 | 3 | 478 | 3.70e-105 | 323 |
MS.gene87631.t1 | MTR_6g081240 | 39.863 | 439 | 260 | 4 | 65 | 501 | 11 | 447 | 4.85e-105 | 322 |
MS.gene87631.t1 | MTR_6g004220 | 37.637 | 457 | 280 | 3 | 48 | 499 | 10 | 466 | 1.26e-104 | 322 |
MS.gene87631.t1 | MTR_1g108840 | 36.456 | 491 | 305 | 1 | 27 | 517 | 11 | 494 | 1.04e-103 | 320 |
MS.gene87631.t1 | MTR_6g081400 | 38.427 | 445 | 273 | 1 | 65 | 508 | 16 | 460 | 3.22e-103 | 318 |
MS.gene87631.t1 | MTR_6g081390 | 37.753 | 445 | 276 | 1 | 65 | 508 | 13 | 457 | 6.37e-101 | 312 |
MS.gene87631.t1 | MTR_6g047640 | 35.366 | 492 | 283 | 4 | 22 | 513 | 3 | 459 | 8.72e-101 | 311 |
MS.gene87631.t1 | MTR_8g106670 | 36.937 | 444 | 280 | 0 | 65 | 508 | 13 | 456 | 3.89e-100 | 310 |
MS.gene87631.t1 | MTR_2g078930 | 37.166 | 487 | 295 | 4 | 22 | 508 | 12 | 487 | 4.47e-100 | 310 |
MS.gene87631.t1 | MTR_2g078960 | 38.380 | 469 | 284 | 2 | 39 | 504 | 7 | 473 | 4.97e-100 | 310 |
MS.gene87631.t1 | MTR_6g081300 | 37.111 | 450 | 281 | 2 | 59 | 507 | 5 | 453 | 1.50e-99 | 308 |
MS.gene87631.t1 | MTR_6g047590 | 37.423 | 489 | 289 | 4 | 21 | 509 | 2 | 473 | 1.64e-99 | 308 |
MS.gene87631.t1 | MTR_2g079020 | 37.100 | 469 | 286 | 2 | 36 | 504 | 18 | 477 | 3.13e-96 | 301 |
MS.gene87631.t1 | MTR_6g081810 | 37.557 | 442 | 250 | 2 | 65 | 506 | 28 | 443 | 3.49e-96 | 299 |
MS.gene87631.t1 | MTR_2g078970 | 36.498 | 474 | 292 | 3 | 35 | 508 | 11 | 475 | 4.70e-94 | 295 |
MS.gene87631.t1 | MTR_1g108990 | 34.956 | 452 | 290 | 1 | 59 | 506 | 16 | 467 | 6.69e-94 | 294 |
MS.gene87631.t1 | MTR_1g109060 | 35.065 | 462 | 294 | 2 | 59 | 516 | 15 | 474 | 1.73e-90 | 285 |
MS.gene87631.t1 | MTR_6g081310 | 38.318 | 428 | 250 | 4 | 92 | 506 | 24 | 450 | 4.84e-88 | 278 |
MS.gene87631.t1 | MTR_1g109060 | 35.730 | 445 | 282 | 1 | 59 | 499 | 15 | 459 | 1.22e-87 | 278 |
MS.gene87631.t1 | MTR_5g090280 | 39.709 | 413 | 215 | 3 | 123 | 508 | 1 | 406 | 8.89e-85 | 268 |
MS.gene87631.t1 | MTR_7g082800 | 34.974 | 386 | 251 | 0 | 123 | 508 | 1 | 386 | 2.79e-83 | 264 |
MS.gene87631.t1 | MTR_6g004220 | 34.625 | 387 | 248 | 3 | 49 | 430 | 11 | 397 | 3.28e-77 | 250 |
MS.gene87631.t1 | MTR_1g101500 | 29.258 | 458 | 324 | 0 | 47 | 504 | 47 | 504 | 7.58e-69 | 230 |
MS.gene87631.t1 | MTR_5g067460 | 29.400 | 500 | 337 | 5 | 18 | 508 | 6 | 498 | 2.06e-68 | 230 |
MS.gene87631.t1 | MTR_5g010830 | 29.186 | 442 | 312 | 1 | 65 | 506 | 66 | 506 | 1.11e-67 | 227 |
MS.gene87631.t1 | MTR_6g043810 | 29.387 | 473 | 316 | 5 | 65 | 519 | 24 | 496 | 1.39e-65 | 221 |
MS.gene87631.t1 | MTR_6g043810 | 29.387 | 473 | 316 | 5 | 65 | 519 | 34 | 506 | 1.62e-65 | 221 |
MS.gene87631.t1 | MTR_0039s0080 | 28.145 | 469 | 333 | 4 | 48 | 515 | 23 | 488 | 4.02e-65 | 220 |
MS.gene87631.t1 | MTR_3g111020 | 29.844 | 449 | 304 | 6 | 65 | 508 | 52 | 494 | 6.64e-63 | 215 |
MS.gene87631.t1 | MTR_8g102430 | 30.682 | 440 | 283 | 3 | 65 | 503 | 24 | 442 | 2.58e-60 | 205 |
MS.gene87631.t1 | MTR_2g078990 | 35.762 | 302 | 194 | 0 | 207 | 508 | 3 | 304 | 7.14e-57 | 192 |
MS.gene87631.t1 | MTR_6g004220 | 33.876 | 307 | 198 | 3 | 48 | 349 | 10 | 316 | 1.31e-56 | 192 |
MS.gene87631.t1 | MTR_6g088805 | 28.478 | 460 | 320 | 2 | 65 | 518 | 28 | 484 | 1.49e-52 | 186 |
MS.gene87631.t1 | MTR_4g027920 | 25.688 | 436 | 322 | 1 | 65 | 498 | 157 | 592 | 6.32e-52 | 187 |
MS.gene87631.t1 | MTR_5g011540 | 29.412 | 442 | 307 | 3 | 65 | 503 | 44 | 483 | 6.21e-45 | 165 |
MS.gene87631.t1 | MTR_2g435930 | 24.236 | 458 | 325 | 3 | 65 | 503 | 20 | 474 | 1.09e-39 | 150 |
MS.gene87631.t1 | MTR_2g079030 | 39.378 | 193 | 117 | 0 | 303 | 495 | 319 | 511 | 1.02e-37 | 146 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87631.t1 | AT3G21690 | 76.827 | 479 | 111 | 0 | 39 | 517 | 26 | 504 | 0.0 | 743 |
MS.gene87631.t1 | AT1G11670 | 64.330 | 485 | 172 | 1 | 35 | 519 | 20 | 503 | 0.0 | 645 |
MS.gene87631.t1 | AT1G61890 | 64.536 | 485 | 172 | 0 | 35 | 519 | 17 | 501 | 0.0 | 644 |
MS.gene87631.t1 | AT1G61890 | 65.591 | 465 | 160 | 0 | 35 | 499 | 17 | 481 | 0.0 | 625 |
MS.gene87631.t1 | AT4G21910 | 57.143 | 511 | 200 | 3 | 10 | 516 | 12 | 507 | 0.0 | 588 |
MS.gene87631.t1 | AT4G21910 | 57.143 | 511 | 200 | 3 | 10 | 516 | 12 | 507 | 0.0 | 588 |
MS.gene87631.t1 | AT4G21910 | 59.072 | 474 | 193 | 1 | 43 | 516 | 33 | 505 | 0.0 | 583 |
MS.gene87631.t1 | AT4G21910 | 59.072 | 474 | 193 | 1 | 43 | 516 | 33 | 505 | 0.0 | 583 |
MS.gene87631.t1 | AT1G61890 | 65.287 | 435 | 151 | 0 | 35 | 469 | 17 | 451 | 0.0 | 578 |
MS.gene87631.t1 | AT4G21903 | 60.426 | 470 | 185 | 1 | 43 | 512 | 31 | 499 | 0.0 | 565 |
MS.gene87631.t1 | AT4G21903 | 59.459 | 481 | 189 | 2 | 43 | 518 | 31 | 510 | 0.0 | 556 |
MS.gene87631.t1 | AT4G21903 | 62.821 | 390 | 145 | 0 | 123 | 512 | 1 | 390 | 1.78e-178 | 507 |
MS.gene87631.t1 | AT5G38030 | 48.343 | 513 | 246 | 4 | 8 | 519 | 4 | 498 | 7.34e-160 | 464 |
MS.gene87631.t1 | AT1G47530 | 48.718 | 507 | 235 | 4 | 9 | 515 | 3 | 484 | 1.09e-157 | 458 |
MS.gene87631.t1 | AT3G26590 | 47.465 | 493 | 248 | 3 | 30 | 516 | 8 | 495 | 6.39e-154 | 449 |
MS.gene87631.t1 | AT3G59030 | 47.551 | 490 | 251 | 3 | 20 | 507 | 8 | 493 | 8.88e-154 | 449 |
MS.gene87631.t1 | AT1G12950 | 45.038 | 524 | 270 | 5 | 8 | 518 | 4 | 522 | 1.18e-151 | 444 |
MS.gene87631.t1 | AT1G23300 | 47.346 | 471 | 244 | 2 | 48 | 515 | 24 | 493 | 5.79e-146 | 429 |
MS.gene87631.t1 | AT4G00350 | 44.576 | 507 | 273 | 3 | 18 | 518 | 35 | 539 | 4.54e-142 | 420 |
MS.gene87631.t1 | AT5G44050 | 44.720 | 483 | 255 | 3 | 38 | 509 | 3 | 484 | 2.61e-139 | 411 |
MS.gene87631.t1 | AT1G47530 | 52.417 | 393 | 186 | 1 | 123 | 515 | 1 | 392 | 1.02e-138 | 406 |
MS.gene87631.t1 | AT1G33110 | 47.566 | 452 | 236 | 1 | 58 | 509 | 29 | 479 | 4.17e-137 | 405 |
MS.gene87631.t1 | AT3G26590 | 51.269 | 394 | 191 | 1 | 123 | 516 | 1 | 393 | 1.85e-136 | 400 |
MS.gene87631.t1 | AT5G65380 | 46.008 | 476 | 237 | 4 | 38 | 510 | 24 | 482 | 2.27e-136 | 404 |
MS.gene87631.t1 | AT5G10420 | 46.272 | 456 | 237 | 4 | 58 | 509 | 31 | 482 | 8.06e-134 | 397 |
MS.gene87631.t1 | AT1G33100 | 46.239 | 452 | 242 | 1 | 58 | 509 | 26 | 476 | 1.16e-133 | 397 |
MS.gene87631.t1 | AT1G33090 | 45.102 | 490 | 252 | 2 | 20 | 509 | 7 | 479 | 2.14e-130 | 389 |
MS.gene87631.t1 | AT1G33080 | 43.878 | 490 | 258 | 2 | 20 | 509 | 7 | 479 | 9.65e-129 | 384 |
MS.gene87631.t1 | AT1G33080 | 43.595 | 484 | 256 | 2 | 20 | 503 | 7 | 473 | 3.07e-125 | 375 |
MS.gene87631.t1 | AT3G59030 | 48.232 | 396 | 202 | 2 | 37 | 430 | 22 | 416 | 5.85e-123 | 367 |
MS.gene87631.t1 | AT4G25640 | 43.800 | 500 | 265 | 6 | 20 | 519 | 2 | 485 | 3.00e-118 | 357 |
MS.gene87631.t1 | AT4G25640 | 43.800 | 500 | 265 | 6 | 20 | 519 | 2 | 485 | 6.94e-118 | 357 |
MS.gene87631.t1 | AT5G17700 | 39.958 | 473 | 279 | 2 | 41 | 509 | 6 | 477 | 9.48e-112 | 341 |
MS.gene87631.t1 | AT5G17700 | 39.958 | 473 | 279 | 2 | 41 | 509 | 6 | 477 | 9.48e-112 | 341 |
MS.gene87631.t1 | AT5G52450 | 40.257 | 467 | 278 | 1 | 42 | 508 | 4 | 469 | 2.41e-110 | 337 |
MS.gene87631.t1 | AT3G03620 | 40.821 | 463 | 271 | 3 | 58 | 519 | 30 | 490 | 1.66e-109 | 335 |
MS.gene87631.t1 | AT3G03620 | 40.821 | 463 | 271 | 3 | 58 | 519 | 30 | 490 | 1.66e-109 | 335 |
MS.gene87631.t1 | AT1G73700 | 40.733 | 464 | 268 | 1 | 49 | 512 | 15 | 471 | 1.11e-105 | 324 |
MS.gene87631.t1 | AT4G25640 | 43.527 | 448 | 238 | 5 | 20 | 467 | 2 | 434 | 9.15e-104 | 319 |
MS.gene87631.t1 | AT3G23560 | 38.074 | 457 | 281 | 1 | 41 | 497 | 17 | 471 | 5.49e-103 | 318 |
MS.gene87631.t1 | AT1G33110 | 46.524 | 374 | 199 | 1 | 58 | 431 | 29 | 401 | 1.40e-102 | 314 |
MS.gene87631.t1 | AT2G34360 | 39.052 | 443 | 260 | 3 | 64 | 505 | 28 | 461 | 1.78e-102 | 316 |
MS.gene87631.t1 | AT1G15150 | 35.865 | 474 | 291 | 2 | 42 | 506 | 3 | 472 | 6.26e-102 | 315 |
MS.gene87631.t1 | AT3G23550 | 36.933 | 463 | 287 | 2 | 35 | 497 | 6 | 463 | 2.24e-101 | 313 |
MS.gene87631.t1 | AT1G15160 | 35.579 | 475 | 292 | 4 | 43 | 506 | 1 | 472 | 1.43e-99 | 309 |
MS.gene87631.t1 | AT2G04070 | 37.307 | 453 | 278 | 1 | 60 | 506 | 16 | 468 | 2.34e-98 | 305 |
MS.gene87631.t1 | AT2G04040 | 36.667 | 450 | 283 | 2 | 64 | 512 | 26 | 474 | 4.08e-98 | 305 |
MS.gene87631.t1 | AT1G15170 | 35.368 | 475 | 297 | 2 | 41 | 506 | 2 | 475 | 3.19e-97 | 303 |
MS.gene87631.t1 | AT2G04080 | 35.622 | 466 | 287 | 4 | 53 | 506 | 4 | 468 | 4.92e-97 | 302 |
MS.gene87631.t1 | AT2G04080 | 35.948 | 459 | 281 | 4 | 53 | 499 | 4 | 461 | 2.15e-95 | 298 |
MS.gene87631.t1 | AT1G71140 | 36.199 | 442 | 282 | 0 | 65 | 506 | 26 | 467 | 2.64e-95 | 298 |
MS.gene87631.t1 | AT1G66760 | 33.814 | 485 | 299 | 2 | 22 | 506 | 7 | 469 | 9.23e-94 | 294 |
MS.gene87631.t1 | AT2G04050 | 35.669 | 471 | 292 | 2 | 53 | 512 | 4 | 474 | 5.76e-93 | 291 |
MS.gene87631.t1 | AT1G66760 | 34.238 | 479 | 293 | 2 | 22 | 500 | 7 | 463 | 1.72e-92 | 290 |
MS.gene87631.t1 | AT1G15180 | 36.226 | 461 | 285 | 1 | 55 | 506 | 16 | 476 | 2.14e-91 | 288 |
MS.gene87631.t1 | AT2G04100 | 34.989 | 443 | 286 | 2 | 65 | 506 | 30 | 471 | 1.27e-88 | 281 |
MS.gene87631.t1 | AT2G04100 | 35.550 | 436 | 279 | 2 | 65 | 499 | 30 | 464 | 2.75e-87 | 277 |
MS.gene87631.t1 | AT1G66780 | 34.198 | 424 | 279 | 0 | 83 | 506 | 53 | 476 | 9.13e-87 | 276 |
MS.gene87631.t1 | AT2G04090 | 34.537 | 443 | 288 | 2 | 65 | 506 | 30 | 471 | 7.82e-86 | 273 |
MS.gene87631.t1 | AT2G34360 | 34.615 | 442 | 239 | 2 | 64 | 505 | 28 | 419 | 8.23e-85 | 269 |
MS.gene87631.t1 | AT1G64820 | 33.028 | 436 | 290 | 2 | 72 | 506 | 36 | 470 | 5.14e-81 | 261 |
MS.gene87631.t1 | AT3G23560 | 37.179 | 390 | 243 | 1 | 41 | 430 | 17 | 404 | 1.09e-80 | 258 |
MS.gene87631.t1 | AT1G15150 | 37.394 | 353 | 221 | 0 | 154 | 506 | 4 | 356 | 1.43e-80 | 256 |
MS.gene87631.t1 | AT5G17700 | 37.531 | 397 | 243 | 2 | 41 | 433 | 6 | 401 | 4.64e-79 | 253 |
MS.gene87631.t1 | AT1G15170 | 36.544 | 353 | 224 | 0 | 154 | 506 | 4 | 356 | 9.02e-79 | 251 |
MS.gene87631.t1 | AT1G66760 | 32.029 | 409 | 256 | 2 | 22 | 430 | 7 | 393 | 5.12e-67 | 221 |
MS.gene87631.t1 | AT1G66760 | 35.821 | 335 | 215 | 0 | 166 | 500 | 1 | 335 | 5.91e-67 | 219 |
MS.gene87631.t1 | AT2G38510 | 27.434 | 452 | 327 | 1 | 65 | 515 | 6 | 457 | 1.93e-64 | 217 |
MS.gene87631.t1 | AT4G29140 | 29.613 | 439 | 309 | 0 | 65 | 503 | 56 | 494 | 1.36e-62 | 214 |
MS.gene87631.t1 | AT5G19700 | 26.998 | 463 | 334 | 1 | 42 | 504 | 17 | 475 | 1.46e-59 | 205 |
MS.gene87631.t1 | AT1G58340 | 27.033 | 455 | 328 | 2 | 65 | 517 | 58 | 510 | 1.62e-58 | 203 |
MS.gene87631.t1 | AT5G52050 | 27.859 | 481 | 310 | 4 | 44 | 498 | 5 | 474 | 2.34e-56 | 196 |
MS.gene87631.t1 | AT1G71870 | 26.201 | 458 | 320 | 2 | 65 | 504 | 24 | 481 | 3.84e-56 | 196 |
MS.gene87631.t1 | AT4G23030 | 31.542 | 428 | 288 | 3 | 84 | 508 | 51 | 476 | 3.80e-55 | 193 |
MS.gene87631.t1 | AT1G15180 | 36.823 | 277 | 175 | 0 | 154 | 430 | 4 | 280 | 4.21e-55 | 191 |
MS.gene87631.t1 | AT5G49130 | 25.546 | 458 | 327 | 3 | 65 | 508 | 26 | 483 | 8.54e-47 | 170 |
MS.gene87631.t1 | AT4G22790 | 28.145 | 469 | 324 | 7 | 35 | 498 | 5 | 465 | 1.27e-42 | 159 |
MS.gene87631.t1 | AT2G04066 | 37.500 | 128 | 80 | 0 | 379 | 506 | 36 | 163 | 3.77e-26 | 105 |
Find 101 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGGTTTCTATTTCAAATT+TGG | 0.131519 | 4.1:+49113273 | MS.gene87631:CDS |
TTCTGGTCATCTTGGTAATT+TGG | 0.143264 | 4.1:+49102079 | MS.gene87631:CDS |
CAAATTGGGCTTGGTTTATT+AGG | 0.172889 | 4.1:+49103305 | MS.gene87631:CDS |
CTCTTGATTCTCTTTCTATT+TGG | 0.176770 | 4.1:+49103561 | MS.gene87631:CDS |
TCTCCTAGAAATATTAAAAT+TGG | 0.202821 | 4.1:-49103098 | None:intergenic |
ATACCTTTGGGTGCAGTTCT+TGG | 0.241327 | 4.1:+49113255 | MS.gene87631:CDS |
CACTTGTGGTGCTTGCATTA+AGG | 0.251007 | 4.1:+49109422 | MS.gene87631:CDS |
GCTCTTGCCATTGTCCTAAA+TGG | 0.255274 | 4.1:+49109517 | MS.gene87631:CDS |
TATGTTGTTATCTACCAAAT+TGG | 0.268419 | 4.1:+49103290 | MS.gene87631:CDS |
GGTATCCAAATATTTGCTTA+TGG | 0.280228 | 4.1:+49102131 | MS.gene87631:CDS |
TGAGTCCATAAGCAAATATT+TGG | 0.288414 | 4.1:-49102136 | None:intergenic |
AGACAGGTTGAACACCATTT+AGG | 0.291327 | 4.1:-49109531 | None:intergenic |
GACTTGGTACTTTCAAATCT+TGG | 0.298304 | 4.1:+49103502 | MS.gene87631:CDS |
GTAAACGTTGGTTGTTATTA+CGG | 0.299705 | 4.1:+49113225 | MS.gene87631:CDS |
GTGAGAGTGAGCAATGAATT+AGG | 0.311563 | 4.1:+49109322 | MS.gene87631:CDS |
GGAATATGGTTGGGAATGTT+AGG | 0.327808 | 4.1:+49113381 | MS.gene87631:CDS |
CTAATAAACCAAGCCCAATT+TGG | 0.336506 | 4.1:-49103304 | None:intergenic |
TGGTTTATTAGGTGCTTCAT+TGG | 0.339209 | 4.1:+49103316 | MS.gene87631:CDS |
GCTGCTTCCCTTGGAAATAA+TGG | 0.345684 | 4.1:+49102110 | MS.gene87631:CDS |
TACGGGATTGGCATACCTTT+GGG | 0.354515 | 4.1:+49113243 | MS.gene87631:CDS |
ACTTGTGGTGCTTGCATTAA+GGG | 0.362193 | 4.1:+49109423 | MS.gene87631:CDS |
TCATCATTCACTCATTCATT+TGG | 0.367294 | 4.1:+49101879 | MS.gene87631:CDS |
TAAACGTTGGTTGTTATTAC+GGG | 0.367910 | 4.1:+49113226 | MS.gene87631:CDS |
GAGCTTGCTGCTGCTTCCCT+TGG | 0.368536 | 4.1:+49102101 | MS.gene87631:CDS |
GTTACTTCCTCATCCTGAAT+TGG | 0.370620 | 4.1:+49103538 | MS.gene87631:CDS |
TTACGGGATTGGCATACCTT+TGG | 0.380719 | 4.1:+49113242 | MS.gene87631:CDS |
ATGTTGTTATCTACCAAATT+GGG | 0.387822 | 4.1:+49103291 | MS.gene87631:CDS |
AGTATTGGTGTTGGTTCCCT+TGG | 0.393328 | 4.1:-49101852 | None:intergenic |
GTTATCTACCAAATTGGGCT+TGG | 0.397719 | 4.1:+49103296 | MS.gene87631:CDS |
ACACTATGTGGACAAGCATT+TGG | 0.401527 | 4.1:+49102975 | MS.gene87631:CDS |
AGAGAATCAAGAGCCAATTC+AGG | 0.404938 | 4.1:-49103551 | None:intergenic |
GGTGTTCAACCTGTCTTATC+TGG | 0.406641 | 4.1:+49109538 | MS.gene87631:CDS |
TATTATTGTTAAAATTAAAC+CGG | 0.414989 | 4.1:-49103060 | None:intergenic |
TAGAAATATTAAAATTGGTT+CGG | 0.421158 | 4.1:-49103093 | None:intergenic |
TGTGTATAGGGAATATGGTT+GGG | 0.435556 | 4.1:+49113372 | MS.gene87631:intron |
GTGAAAAGTGTAAGCATACT+TGG | 0.441557 | 4.1:+49103396 | MS.gene87631:CDS |
AAAGGGGTGGCCGTTGGATG+TGG | 0.455534 | 4.1:+49113180 | MS.gene87631:intron |
TGATGTTGTGTTTAGAGACT+TGG | 0.457373 | 4.1:+49103486 | MS.gene87631:CDS |
GTTGGTTGTTATTACGGGAT+TGG | 0.463076 | 4.1:+49113231 | MS.gene87631:CDS |
TGTCTAATACGTTTCACAAA+AGG | 0.464084 | 4.1:-49101957 | None:intergenic |
GGTTCCCTTGGTACTAGCAA+AGG | 0.472054 | 4.1:-49101840 | None:intergenic |
TAGCATAGGCAAATATTTGT+GGG | 0.473569 | 4.1:-49103169 | None:intergenic |
TTGACATCACATAGTTGATA+AGG | 0.484452 | 4.1:-49102040 | None:intergenic |
ATAGCATAGGCAAATATTTG+TGG | 0.485227 | 4.1:-49103170 | None:intergenic |
TTGTGTATAGGGAATATGGT+TGG | 0.489051 | 4.1:+49113371 | MS.gene87631:intron |
TTTGGATACCATTATTTCCA+AGG | 0.502739 | 4.1:-49102118 | None:intergenic |
GGGTAACATTTCGAACGGAT+TGG | 0.504097 | 4.1:+49113436 | MS.gene87631:CDS |
GTTAAGAGCTTCAATTCTTG+AGG | 0.507708 | 4.1:-49113820 | None:intergenic |
ATATGCAGTACCACAGTGTC+TGG | 0.508148 | 4.1:+49108002 | MS.gene87631:intron |
TATTGGAAAGTTTATAGCAT+AGG | 0.509599 | 4.1:-49103183 | None:intergenic |
AAGTGTAAGCATACTTGGAA+AGG | 0.510303 | 4.1:+49103401 | MS.gene87631:CDS |
CTATTTCAAATTTGGAGCCA+AGG | 0.510493 | 4.1:+49113281 | MS.gene87631:CDS |
GTGAGCAATGAATTAGGAGC+AGG | 0.511345 | 4.1:+49109328 | MS.gene87631:CDS |
AATATTTGCTTATGGACTCA+TGG | 0.511547 | 4.1:+49102139 | MS.gene87631:CDS |
ATGATGAAACAGTTGGGCAT+GGG | 0.515569 | 4.1:+49102939 | MS.gene87631:intron |
TGGACGTTCATGATCTCAGT+TGG | 0.517302 | 4.1:+49108026 | MS.gene87631:CDS |
AGTGTAAGCATACTTGGAAA+GGG | 0.518083 | 4.1:+49103402 | MS.gene87631:CDS |
TACATGAAAGGGGTGGCCGT+TGG | 0.526495 | 4.1:+49113174 | MS.gene87631:intron |
AACGTATTAGACATGCTACA+TGG | 0.535997 | 4.1:+49101967 | MS.gene87631:CDS |
ACAGTGCTTCTCACAATAGC+CGG | 0.537993 | 4.1:+49103041 | MS.gene87631:CDS |
TCAAGAGCCAATTCAGGATG+AGG | 0.538881 | 4.1:-49103545 | None:intergenic |
ATGAACCTTTGCTAGTACCA+AGG | 0.548884 | 4.1:+49101835 | MS.gene87631:CDS |
TCTTCAAGCACAAAGCATAG+TGG | 0.558396 | 4.1:+49103214 | MS.gene87631:CDS |
GTGAATGATGATAGTAGTAT+TGG | 0.560516 | 4.1:-49101867 | None:intergenic |
GTTGGGAATGTTAGGTGGCA+CGG | 0.563108 | 4.1:+49113389 | MS.gene87631:CDS |
GGTTCAAAGCATGAATCAGA+TGG | 0.570895 | 4.1:+49101900 | MS.gene87631:CDS |
GGGTGGCCGTTGGATGTGGA+TGG | 0.574578 | 4.1:+49113184 | MS.gene87631:CDS |
TGATGAAACAGTTGGGCATG+GGG | 0.577037 | 4.1:+49102940 | MS.gene87631:intron |
ATTGTGGGTAACATTTCGAA+CGG | 0.579480 | 4.1:+49113431 | MS.gene87631:CDS |
TCGAACGGATTGGAATAATG+AGG | 0.580155 | 4.1:+49113446 | MS.gene87631:CDS |
GCAGTACCACAGTGTCTGGA+TGG | 0.583514 | 4.1:+49108006 | MS.gene87631:intron |
TTGGATACCATTATTTCCAA+GGG | 0.585736 | 4.1:-49102117 | None:intergenic |
TCAATTCTTGAGGAGTGACT+CGG | 0.587642 | 4.1:-49113810 | None:intergenic |
GATGATAGTAGTATTGGTGT+TGG | 0.589523 | 4.1:-49101861 | None:intergenic |
ATAATTATACCAGATAAGAC+AGG | 0.592062 | 4.1:-49109547 | None:intergenic |
CAATTACAGCAGGTGCAGCT+AGG | 0.592518 | 4.1:-49102013 | None:intergenic |
TTGGATTTCAAGCAGCTGCA+AGG | 0.593329 | 4.1:+49108045 | MS.gene87631:CDS |
CATGATGAAACAGTTGGGCA+TGG | 0.593815 | 4.1:+49102938 | MS.gene87631:intron |
TTGAACACCATTTAGGACAA+TGG | 0.601636 | 4.1:-49109524 | None:intergenic |
GCTGCTGATATGTATGCACT+TGG | 0.602582 | 4.1:-49103239 | None:intergenic |
ATCAGCTATGTCTTCACAGA+CGG | 0.605567 | 4.1:+49109451 | MS.gene87631:CDS |
TGAACCTTTGCTAGTACCAA+GGG | 0.605786 | 4.1:+49101836 | MS.gene87631:CDS |
TAACAACATAACTTAATACA+AGG | 0.614490 | 4.1:-49103277 | None:intergenic |
CAAACAAGAGGCTAAACAAG+TGG | 0.618673 | 4.1:+49113777 | MS.gene87631:CDS |
ATAAGGTACACAATTACAGC+AGG | 0.619914 | 4.1:-49102023 | None:intergenic |
TTAGGACAATGGCAAGAGCA+AGG | 0.626354 | 4.1:-49109513 | None:intergenic |
ATACATATCAGCAGCAACAT+TGG | 0.626541 | 4.1:+49103247 | MS.gene87631:CDS |
ATGTGCAATTATAGCACTTG+TGG | 0.629020 | 4.1:+49109408 | MS.gene87631:CDS |
AAACAAGAGGCTAAACAAGT+GGG | 0.629878 | 4.1:+49113778 | MS.gene87631:CDS |
TGTCTTCACAGACGGTGAAG+AGG | 0.635141 | 4.1:+49109459 | MS.gene87631:CDS |
ATATGGTTGGGAATGTTAGG+TGG | 0.636197 | 4.1:+49113384 | MS.gene87631:CDS |
ACGTATTAGACATGCTACAT+GGG | 0.638198 | 4.1:+49101968 | MS.gene87631:CDS |
TGTTTGCCATCCACATCCAA+CGG | 0.639236 | 4.1:-49113190 | None:intergenic |
CAAGAGGCTAAACAAGTGGG+AGG | 0.641941 | 4.1:+49113781 | MS.gene87631:CDS |
AAACCAAGAACTGCACCCAA+AGG | 0.650080 | 4.1:-49113258 | None:intergenic |
AGTGCTGTTGAGACACTATG+TGG | 0.660847 | 4.1:+49102963 | MS.gene87631:CDS |
AAGAGGCTAAACAAGTGGGA+GGG | 0.661127 | 4.1:+49113782 | MS.gene87631:CDS |
TTTGTTGCGTATGTAAACGT+TGG | 0.686719 | 4.1:+49113213 | MS.gene87631:CDS |
ACAATGGCAAGAGCAAGGAG+TGG | 0.692279 | 4.1:-49109508 | None:intergenic |
AGGTTGTAGAGTCAAACAAG+AGG | 0.719165 | 4.1:+49113765 | MS.gene87631:intron |
GAACGTCCATCCAGACACTG+TGG | 0.760764 | 4.1:-49108012 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 49101801 | 49113832 | 49101801 | ID=MS.gene87631 |
chr4.1 | mRNA | 49101801 | 49113832 | 49101801 | ID=MS.gene87631.t1;Parent=MS.gene87631 |
chr4.1 | exon | 49101801 | 49102160 | 49101801 | ID=MS.gene87631.t1.exon1;Parent=MS.gene87631.t1 |
chr4.1 | CDS | 49101801 | 49102160 | 49101801 | ID=cds.MS.gene87631.t1;Parent=MS.gene87631.t1 |
chr4.1 | exon | 49102951 | 49103582 | 49102951 | ID=MS.gene87631.t1.exon2;Parent=MS.gene87631.t1 |
chr4.1 | CDS | 49102951 | 49103582 | 49102951 | ID=cds.MS.gene87631.t1;Parent=MS.gene87631.t1 |
chr4.1 | exon | 49108010 | 49108066 | 49108010 | ID=MS.gene87631.t1.exon3;Parent=MS.gene87631.t1 |
chr4.1 | CDS | 49108010 | 49108066 | 49108010 | ID=cds.MS.gene87631.t1;Parent=MS.gene87631.t1 |
chr4.1 | exon | 49109321 | 49109559 | 49109321 | ID=MS.gene87631.t1.exon4;Parent=MS.gene87631.t1 |
chr4.1 | CDS | 49109321 | 49109559 | 49109321 | ID=cds.MS.gene87631.t1;Parent=MS.gene87631.t1 |
chr4.1 | exon | 49113184 | 49113302 | 49113184 | ID=MS.gene87631.t1.exon5;Parent=MS.gene87631.t1 |
chr4.1 | CDS | 49113184 | 49113302 | 49113184 | ID=cds.MS.gene87631.t1;Parent=MS.gene87631.t1 |
chr4.1 | exon | 49113381 | 49113467 | 49113381 | ID=MS.gene87631.t1.exon6;Parent=MS.gene87631.t1 |
chr4.1 | CDS | 49113381 | 49113467 | 49113381 | ID=cds.MS.gene87631.t1;Parent=MS.gene87631.t1 |
chr4.1 | exon | 49113767 | 49113832 | 49113767 | ID=MS.gene87631.t1.exon7;Parent=MS.gene87631.t1 |
chr4.1 | CDS | 49113767 | 49113832 | 49113767 | ID=cds.MS.gene87631.t1;Parent=MS.gene87631.t1 |
Gene Sequence |
Protein sequence |