Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89074.t1 | RHN76454.1 | 92.1 | 619 | 12 | 2 | 1 | 584 | 1 | 617 | 0.00E+00 | 1077 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89074.t1 | Q39002 | 76.1 | 611 | 99 | 4 | 1 | 567 | 1 | 608 | 3.0e-259 | 895.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89074.t1 | A0A396JH30 | 92.1 | 619 | 12 | 2 | 1 | 584 | 1 | 617 | 0.0e+00 | 1077.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene89074 | 0.80229 | 6.02E-49 | -1.69E-46 |
| MS.gene049257 | MS.gene89074 | 0.80473 | 1.88E-49 | -1.69E-46 |
| MS.gene049400 | MS.gene89074 | -0.823564 | 1.29E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene89074 | 0.860221 | 2.40E-63 | -1.69E-46 |
| MS.gene050133 | MS.gene89074 | -0.857565 | 1.50E-62 | -1.69E-46 |
| MS.gene050209 | MS.gene89074 | 0.837068 | 6.46E-57 | -1.69E-46 |
| MS.gene050315 | MS.gene89074 | 0.800254 | 1.57E-48 | -1.69E-46 |
| MS.gene050426 | MS.gene89074 | -0.85733 | 1.76E-62 | -1.69E-46 |
| MS.gene050553 | MS.gene89074 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene051208 | MS.gene89074 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene051521 | MS.gene89074 | 0.810663 | 1.03E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene89074 | 0.831999 | 1.21E-55 | -1.69E-46 |
| MS.gene051552 | MS.gene89074 | -0.803793 | 2.94E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene89074 | -0.803046 | 4.20E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene89074 | 0.848679 | 5.26E-60 | -1.69E-46 |
| MS.gene052135 | MS.gene89074 | 0.845651 | 3.56E-59 | -1.69E-46 |
| MS.gene052469 | MS.gene89074 | 0.897175 | 1.81E-76 | -1.69E-46 |
| MS.gene052589 | MS.gene89074 | 0.808315 | 3.29E-50 | -1.69E-46 |
| MS.gene053330 | MS.gene89074 | 0.862512 | 4.81E-64 | -1.69E-46 |
| MS.gene054102 | MS.gene89074 | 0.800739 | 1.25E-48 | -1.69E-46 |
| MS.gene054556 | MS.gene89074 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene054719 | MS.gene89074 | 0.833971 | 3.92E-56 | -1.69E-46 |
| MS.gene054809 | MS.gene89074 | -0.80833 | 3.27E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene89074 | 0.89296 | 9.80E-75 | -1.69E-46 |
| MS.gene05553 | MS.gene89074 | 0.86721 | 1.62E-65 | -1.69E-46 |
| MS.gene05556 | MS.gene89074 | 0.890227 | 1.19E-73 | -1.69E-46 |
| MS.gene055741 | MS.gene89074 | 0.802872 | 4.56E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene89074 | 0.813918 | 2.01E-51 | -1.69E-46 |
| MS.gene056233 | MS.gene89074 | 0.810948 | 8.94E-51 | -1.69E-46 |
| MS.gene056633 | MS.gene89074 | 0.835048 | 2.10E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene89074 | 0.817381 | 3.40E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene89074 | 0.80103 | 1.09E-48 | -1.69E-46 |
| MS.gene058276 | MS.gene89074 | 0.804055 | 2.60E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene89074 | 0.817295 | 3.55E-52 | -1.69E-46 |
| MS.gene058700 | MS.gene89074 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene058743 | MS.gene89074 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene89074 | 0.804342 | 2.26E-49 | -1.69E-46 |
| MS.gene059512 | MS.gene89074 | 0.807467 | 4.98E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene89074 | 0.859554 | 3.82E-63 | -1.69E-46 |
| MS.gene059788 | MS.gene89074 | 0.813915 | 2.01E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene89074 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene89074 | 0.813911 | 2.01E-51 | -1.69E-46 |
| MS.gene060717 | MS.gene89074 | 0.838108 | 3.50E-57 | -1.69E-46 |
| MS.gene061159 | MS.gene89074 | 0.80291 | 4.48E-49 | -1.69E-46 |
| MS.gene061231 | MS.gene89074 | 0.854884 | 9.14E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89074.t1 | MTR_2g102740 | 87.884 | 619 | 16 | 3 | 1 | 584 | 1 | 595 | 0.0 | 1057 |
| MS.gene89074.t1 | MTR_4g011460 | 78.219 | 629 | 86 | 4 | 1 | 584 | 1 | 623 | 0.0 | 929 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89074.t1 | AT1G80300 | 75.896 | 614 | 97 | 4 | 1 | 568 | 1 | 609 | 0.0 | 907 |
| MS.gene89074.t1 | AT1G15500 | 74.593 | 614 | 112 | 4 | 1 | 573 | 1 | 611 | 0.0 | 881 |
Find 122 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTATCTGTTTCCTTTAT+TGG | 0.142710 | 2.4:+2333494 | MS.gene89074:CDS |
| CGCTTGCAATTATGAGAATT+TGG | 0.200674 | 2.4:+2332355 | MS.gene89074:CDS |
| CATATTTGTTGAATATAAAT+TGG | 0.215723 | 2.4:-2334617 | None:intergenic |
| ATCCTTGGACCGCGGTTTCT+TGG | 0.227749 | 2.4:+2332330 | MS.gene89074:CDS |
| CTTTCAGGAGAAGCCGAAAA+TGG | 0.229700 | 2.4:+2334289 | MS.gene89074:intron |
| TTGTGATTTCTGTTCTGTTT+TGG | 0.265525 | 2.4:+2332421 | MS.gene89074:CDS |
| CAATTTATATTCAACAAATA+TGG | 0.275165 | 2.4:+2334618 | MS.gene89074:CDS |
| TGATGTCTTCAAGATATATA+AGG | 0.283832 | 2.4:+2334336 | MS.gene89074:CDS |
| GCACCCGTTATTGGAAAGTT+TGG | 0.300802 | 2.4:+2334729 | MS.gene89074:CDS |
| GATCCACTCGCACCCGTTAT+TGG | 0.319372 | 2.4:+2334720 | MS.gene89074:CDS |
| GTGAATCTTCCTATGGCTAT+TGG | 0.321415 | 2.4:+2332144 | MS.gene89074:CDS |
| ATACTTGGGAGGTGTGCTTT+TGG | 0.331973 | 2.4:+2335466 | MS.gene89074:CDS |
| TCTAGTCTGAGGGAAACTTT+AGG | 0.344531 | 2.4:+2333406 | MS.gene89074:CDS |
| CGCTCGTAGCCAGAAGAAAA+AGG | 0.347930 | 2.4:+2333543 | MS.gene89074:CDS |
| AATTGTTCACCCACCAATAA+AGG | 0.352531 | 2.4:-2333507 | None:intergenic |
| GGCGATTTCTCAACCGCAAC+TGG | 0.363781 | 2.4:+2334564 | MS.gene89074:CDS |
| ACTTTAGGTCCTGGAGTTGA+TGG | 0.364996 | 2.4:+2333421 | MS.gene89074:CDS |
| AGCTAATTCAACTCCATACT+TGG | 0.368256 | 2.4:+2335451 | MS.gene89074:CDS |
| AAAAGCACACCTCCCAAGTA+TGG | 0.374398 | 2.4:-2335464 | None:intergenic |
| TTCTATCCACTGTTTGGACT+TGG | 0.381227 | 2.4:+2333337 | MS.gene89074:CDS |
| GATGTTGTATGCAACCCATT+AGG | 0.390606 | 2.4:+2335374 | MS.gene89074:CDS |
| CAGTTCATGATCCTAACTTT+TGG | 0.391159 | 2.4:+2335422 | MS.gene89074:CDS |
| GAAGCTGTTCTTCAATCAAA+AGG | 0.398374 | 2.4:+2331691 | MS.gene89074:CDS |
| AAGCGATTCTATCCACTGTT+TGG | 0.399212 | 2.4:+2333331 | MS.gene89074:CDS |
| GCCACATTAGTGGTTGCATA+TGG | 0.400363 | 2.4:+2334365 | MS.gene89074:CDS |
| TGCAACCCATTAGGAAAATC+TGG | 0.407154 | 2.4:+2335383 | MS.gene89074:CDS |
| ATTTGATCCGTGCAAAGAAA+TGG | 0.413264 | 2.4:+2334827 | MS.gene89074:CDS |
| TCACCTGCTTCTGTATATAA+AGG | 0.424567 | 2.4:-2335644 | None:intergenic |
| TAGCTAGTGAACCAAAAGTT+AGG | 0.428507 | 2.4:-2335433 | None:intergenic |
| ATAAAAGACGAGTACTCATT+CGG | 0.430650 | 2.4:-2334540 | None:intergenic |
| TAGGTCCTGGAGTTGATGGT+TGG | 0.436364 | 2.4:+2333425 | MS.gene89074:CDS |
| AGGTCCTGGAGTTGATGGTT+GGG | 0.439493 | 2.4:+2333426 | MS.gene89074:CDS |
| GATAACCTTCTTAGTATCCT+TGG | 0.441619 | 2.4:+2332315 | MS.gene89074:CDS |
| ATTTCTTGCTGTAGGTCAAA+GGG | 0.442605 | 2.4:+2335339 | MS.gene89074:intron |
| CGGATCAAATAAACTGTACT+TGG | 0.442749 | 2.4:-2334814 | None:intergenic |
| CAATCCAAACTTTCCAATAA+CGG | 0.443581 | 2.4:-2334733 | None:intergenic |
| AAACAATGAAATTACCTGAT+TGG | 0.451901 | 2.4:-2332451 | None:intergenic |
| AAGGGATCTTGCCACATTAG+TGG | 0.458361 | 2.4:+2334355 | MS.gene89074:CDS |
| CTGTCCGACCGGAGAATACA+AGG | 0.461059 | 2.4:-2333372 | None:intergenic |
| GGAAAGAGAAACTGCTGTTA+AGG | 0.462177 | 2.4:+2335577 | MS.gene89074:CDS |
| AATCCAAACTTTCCAATAAC+GGG | 0.463035 | 2.4:-2334732 | None:intergenic |
| TTAATCTTGTTGAAGTTACA+TGG | 0.465742 | 2.4:+2334396 | MS.gene89074:CDS |
| TTTATGTCATGGCTGAATTG+TGG | 0.465791 | 2.4:+2332391 | MS.gene89074:CDS |
| TTTCAGGAGAAGCCGAAAAT+GGG | 0.471676 | 2.4:+2334290 | MS.gene89074:intron |
| TTATGTCATGGCTGAATTGT+GGG | 0.475139 | 2.4:+2332392 | MS.gene89074:CDS |
| TTATCTGTTTCCTTTATTGG+TGG | 0.477332 | 2.4:+2333497 | MS.gene89074:CDS |
| CTGAGGGAAACTTTAGGTCC+TGG | 0.481369 | 2.4:+2333412 | MS.gene89074:CDS |
| TAAAAGACGAGTACTCATTC+GGG | 0.484768 | 2.4:-2334539 | None:intergenic |
| CTCAAGAAGATTATACCACT+TGG | 0.491337 | 2.4:+2332006 | MS.gene89074:CDS |
| GCTTCTGCTGGTGTTGGTGA+TGG | 0.492964 | 2.4:+2331919 | MS.gene89074:CDS |
| GATGTCTTCAAGATATATAA+GGG | 0.494355 | 2.4:+2334337 | MS.gene89074:CDS |
| AATGTTGCCCTTGTATTCTC+CGG | 0.497366 | 2.4:+2333364 | MS.gene89074:CDS |
| TATCTGTTTCCTTTATTGGT+GGG | 0.500161 | 2.4:+2333498 | MS.gene89074:CDS |
| AAGCTGTTCTTCAATCAAAA+GGG | 0.502879 | 2.4:+2331692 | MS.gene89074:CDS |
| TATATTCAACAAATATGGAT+GGG | 0.507628 | 2.4:+2334623 | MS.gene89074:CDS |
| CCTACCGTCCTGCTCATGAC+TGG | 0.508334 | 2.4:+2334666 | MS.gene89074:CDS |
| GAAATCAAAGCTCAAAGCTC+AGG | 0.510846 | 2.4:+2334418 | MS.gene89074:CDS |
| TTCTGGCTACGAGCGGGAAG+AGG | 0.510867 | 2.4:-2333535 | None:intergenic |
| AATTTCTTGCTGTAGGTCAA+AGG | 0.511554 | 2.4:+2335338 | MS.gene89074:intron |
| AACATGGGTGAATCTTCCTA+TGG | 0.516555 | 2.4:+2332137 | MS.gene89074:CDS |
| GATGAGCATTGTTGTCGGTA+TGG | 0.520984 | 2.4:+2333468 | MS.gene89074:CDS |
| ATGTAGGCCATTTCTTTGCA+CGG | 0.521303 | 2.4:-2334834 | None:intergenic |
| GCACCTTTATATACAGAAGC+AGG | 0.523808 | 2.4:+2335641 | MS.gene89074:CDS |
| AAAGCTGAAGCAGCTTCTGC+TGG | 0.525584 | 2.4:+2331907 | MS.gene89074:CDS |
| GACGAGTACTCATTCGGGCT+AGG | 0.527586 | 2.4:-2334534 | None:intergenic |
| TTATATTCAACAAATATGGA+TGG | 0.528143 | 2.4:+2334622 | MS.gene89074:CDS |
| GAAGCAGCTTCTGCTGGTGT+TGG | 0.528175 | 2.4:+2331913 | MS.gene89074:CDS |
| AGATTCAGATGGACTAATGA+AGG | 0.533272 | 2.4:-2335669 | None:intergenic |
| TTCCCACAAACCCCAAAACC+AGG | 0.534323 | 2.4:+2331725 | MS.gene89074:CDS |
| GCAATGATGAGCATTGTTGT+CGG | 0.538797 | 2.4:+2333463 | MS.gene89074:CDS |
| TTCTTAGTATCCTTGGACCG+CGG | 0.539530 | 2.4:+2332322 | MS.gene89074:CDS |
| GAAGGTAGCGATTCCAGTTG+CGG | 0.541781 | 2.4:-2334577 | None:intergenic |
| GGTTATCAGCAAATGCTTGA+GGG | 0.546477 | 2.4:-2332299 | None:intergenic |
| TTGCTAGCTGCTGTATATGT+TGG | 0.546905 | 2.4:+2334762 | MS.gene89074:CDS |
| AGAAGAACTCGAGAAAGAGT+TGG | 0.547282 | 2.4:+2335556 | MS.gene89074:CDS |
| AAAGTATTTGACTGTCCGAC+CGG | 0.548078 | 2.4:-2333383 | None:intergenic |
| AACCAACTCCAGTCATGAGC+AGG | 0.548574 | 2.4:-2334674 | None:intergenic |
| TGGGTTGCATACAACATCAA+TGG | 0.549558 | 2.4:-2335369 | None:intergenic |
| AGAAATGGCCTACATACCCT+TGG | 0.550644 | 2.4:+2334842 | MS.gene89074:CDS |
| AACCTTGGTATCCTCATCCA+AGG | 0.550694 | 2.4:-2334859 | None:intergenic |
| ATGAGCATTGTTGTCGGTAT+GGG | 0.551365 | 2.4:+2333469 | MS.gene89074:CDS |
| GTCCTGCTCATGACTGGAGT+TGG | 0.553609 | 2.4:+2334672 | MS.gene89074:CDS |
| GACCAAGAAACCGCGGTCCA+AGG | 0.557335 | 2.4:-2332332 | None:intergenic |
| TGAGGAGTTCAAGATTCAGA+TGG | 0.559870 | 2.4:-2335680 | None:intergenic |
| GGAGAATACAAGGGCAACAT+TGG | 0.560749 | 2.4:-2333362 | None:intergenic |
| TTGCCCTTGTATTCTCCGGT+CGG | 0.566110 | 2.4:+2333368 | MS.gene89074:CDS |
| ATATTCAACAAATATGGATG+GGG | 0.569187 | 2.4:+2334624 | MS.gene89074:CDS |
| GGCCTACATACCCTTGGATG+AGG | 0.576175 | 2.4:+2334848 | MS.gene89074:CDS |
| AGGTTATCAGCAAATGCTTG+AGG | 0.584662 | 2.4:-2332300 | None:intergenic |
| GCAGATAACCACCGTTGATG+AGG | 0.585549 | 2.4:+2333306 | MS.gene89074:intron |
| TTTCCAATAACGGGTGCGAG+TGG | 0.586487 | 2.4:-2334723 | None:intergenic |
| GGGTGAATATAGTTGCTAAG+AGG | 0.591742 | 2.4:-2332279 | None:intergenic |
| ATCCTCATCCAAGGGTATGT+AGG | 0.597277 | 2.4:-2334850 | None:intergenic |
| ACATATACAGCAGCTAGCAA+TGG | 0.597920 | 2.4:-2334759 | None:intergenic |
| ATGGCCCAACCATCAACTCC+AGG | 0.601776 | 2.4:-2333430 | None:intergenic |
| GAAGCCGAAAATGGGAACAA+TGG | 0.602041 | 2.4:+2334298 | MS.gene89074:CDS |
| GCTAATTCAACTCCATACTT+GGG | 0.602853 | 2.4:+2335452 | MS.gene89074:CDS |
| ATGTCATGGCTGAATTGTGG+GGG | 0.605136 | 2.4:+2332394 | MS.gene89074:CDS |
| AAACTGAGTGTCAAGTGACT+TGG | 0.606198 | 2.4:-2335516 | None:intergenic |
| TCCATATGCAACCACTAATG+TGG | 0.607287 | 2.4:-2334366 | None:intergenic |
| TCTTCATTCTCAGTCAACAC+TGG | 0.610944 | 2.4:-2335602 | None:intergenic |
| GCGGTCCAAGGATACTAAGA+AGG | 0.613184 | 2.4:-2332320 | None:intergenic |
| GTTCTTGTTGTGACTGCTAG+AGG | 0.613969 | 2.4:+2332084 | MS.gene89074:CDS |
| CAAATTCTCATAATTGCAAG+CGG | 0.621047 | 2.4:-2332354 | None:intergenic |
| GAATCGCTTTGCCTCATCAA+CGG | 0.622356 | 2.4:-2333317 | None:intergenic |
| AACATAAAACCAATAGCCAT+AGG | 0.622502 | 2.4:-2332153 | None:intergenic |
| ACTGAGAATGAAGATGAAGA+TGG | 0.625187 | 2.4:+2335611 | MS.gene89074:CDS |
| ACCCTTGGATGAGGATACCA+AGG | 0.628244 | 2.4:+2334857 | MS.gene89074:CDS |
| TCAAGAAGATTATACCACTT+GGG | 0.628762 | 2.4:+2332007 | MS.gene89074:CDS |
| TATGTCATGGCTGAATTGTG+GGG | 0.635142 | 2.4:+2332393 | MS.gene89074:CDS |
| GCTTACAAGCATCATCGTGA+AGG | 0.635903 | 2.4:-2334595 | None:intergenic |
| TTCTTCTTCGCGACGCAATG+CGG | 0.636676 | 2.4:-2335540 | None:intergenic |
| AATTCAACTCCATACTTGGG+AGG | 0.648893 | 2.4:+2335455 | MS.gene89074:CDS |
| ACCTTGGTATCCTCATCCAA+GGG | 0.649968 | 2.4:-2334858 | None:intergenic |
| CCAGTCATGAGCAGGACGGT+AGG | 0.655341 | 2.4:-2334666 | None:intergenic |
| CTTGCTGTAGGTCAAAGGGA+AGG | 0.663386 | 2.4:+2335343 | MS.gene89074:intron |
| TCGCTTTGCCTCATCAACGG+TGG | 0.685636 | 2.4:-2333314 | None:intergenic |
| AACTCCAGTCATGAGCAGGA+CGG | 0.697709 | 2.4:-2334670 | None:intergenic |
| TGTCCGACCGGAGAATACAA+GGG | 0.707927 | 2.4:-2333371 | None:intergenic |
| TTGGCTCCAAGTCCAAACAG+TGG | 0.718510 | 2.4:-2333343 | None:intergenic |
| GCAAGCGGACCAAGAAACCG+CGG | 0.733587 | 2.4:-2332339 | None:intergenic |
| AACCCATTAGGAAAATCTGG+TGG | 0.735499 | 2.4:+2335386 | MS.gene89074:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATTAAAAGTTATGTAA+AGG | + | chr2.4:2334960-2334979 | MS.gene89074:intron | 15.0% |
| !! | CAATTTATATTCAACAAATA+TGG | + | chr2.4:2334618-2334637 | MS.gene89074:CDS | 15.0% |
| !! | GTATATTAAAAAGTAAAACA+AGG | - | chr2.4:2334189-2334208 | None:intergenic | 15.0% |
| !!! | AAATATTATTGAAAAGTACA+TGG | - | chr2.4:2334237-2334256 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTACATCGTTA+TGG | + | chr2.4:2334263-2334282 | MS.gene89074:intron | 15.0% |
| !!! | CATATTTGTTGAATATAAAT+TGG | - | chr2.4:2334620-2334639 | None:intergenic | 15.0% |
| !!! | GAATACTAATATATACTTTT+TGG | + | chr2.4:2333282-2333301 | MS.gene89074:intron | 15.0% |
| !!! | TTTCAAAATTTTGGATTTTA+TGG | - | chr2.4:2334211-2334230 | None:intergenic | 15.0% |
| !!! | TTTTATTGCTATATCTAAAT+TGG | + | chr2.4:2332631-2332650 | MS.gene89074:intron | 15.0% |
| !! | CCAAAATTATACAACTTTAT+AGG | + | chr2.4:2335282-2335301 | MS.gene89074:intron | 20.0% |
| !! | CTAGTTAACTATTCAAAATT+GGG | - | chr2.4:2333037-2333056 | None:intergenic | 20.0% |
| !! | TAATGAATGATAAGAAGAAA+AGG | - | chr2.4:2332738-2332757 | None:intergenic | 20.0% |
| !! | TATATTCAACAAATATGGAT+GGG | + | chr2.4:2334623-2334642 | MS.gene89074:CDS | 20.0% |
| !! | TCTAGTTAACTATTCAAAAT+TGG | - | chr2.4:2333038-2333057 | None:intergenic | 20.0% |
| !! | TGCTATTGAAATAAAAACTA+TGG | - | chr2.4:2334115-2334134 | None:intergenic | 20.0% |
| !! | TTATATTCAACAAATATGGA+TGG | + | chr2.4:2334622-2334641 | MS.gene89074:CDS | 20.0% |
| !!! | AAAATAATACCTTTTTCTTC+TGG | - | chr2.4:2333555-2333574 | None:intergenic | 20.0% |
| !!! | ACATGGTTTTTTCAAAATTT+TGG | - | chr2.4:2334220-2334239 | None:intergenic | 20.0% |
| !!! | ACTTTATTTTCTAATAGTCA+AGG | + | chr2.4:2335002-2335021 | MS.gene89074:intron | 20.0% |
| !!! | CCTATAAAGTTGTATAATTT+TGG | - | chr2.4:2335285-2335304 | None:intergenic | 20.0% |
| !!! | CTATATCATTCCAATTTTAT+CGG | + | chr2.4:2333738-2333757 | MS.gene89074:intron | 20.0% |
| !!! | GACATATGATAAATTTTTTC+TGG | + | chr2.4:2332540-2332559 | MS.gene89074:intron | 20.0% |
| !!! | TATACCTTTTTTGAAAACAT+GGG | + | chr2.4:2332122-2332141 | MS.gene89074:CDS | 20.0% |
| !!! | TGTATAATTTTGGAGTATTA+AGG | - | chr2.4:2335275-2335294 | None:intergenic | 20.0% |
| !!! | TTATACCTTTTTTGAAAACA+TGG | + | chr2.4:2332121-2332140 | MS.gene89074:CDS | 20.0% |
| !!! | TTCCTTTTATTGCTTTTTTT+GGG | + | chr2.4:2332235-2332254 | MS.gene89074:CDS | 20.0% |
| !!! | TTCTTTTCTCTCATATTATT+CGG | + | chr2.4:2334696-2334715 | MS.gene89074:CDS | 20.0% |
| !!! | TTGTTGTTAAGTTTGTTAAA+GGG | + | chr2.4:2332793-2332812 | MS.gene89074:intron | 20.0% |
| !!! | TTTCTGTTTATTTTATGTCA+TGG | + | chr2.4:2332380-2332399 | MS.gene89074:CDS | 20.0% |
| !!! | TTTTATTTCAATAGCATGAT+TGG | + | chr2.4:2334119-2334138 | MS.gene89074:intron | 20.0% |
| ! | AAACAATGAAATTACCTGAT+TGG | - | chr2.4:2332454-2332473 | None:intergenic | 25.0% |
| ! | AAATTGGAATGATATAGAGA+AGG | - | chr2.4:2333735-2333754 | None:intergenic | 25.0% |
| ! | AATAAGCTGAGAACAATTTA+TGG | - | chr2.4:2335146-2335165 | None:intergenic | 25.0% |
| ! | AATAGAACAAACTCATCAAA+AGG | - | chr2.4:2332613-2332632 | None:intergenic | 25.0% |
| ! | AGACAAAAGATTACAAATGA+GGG | - | chr2.4:2332849-2332868 | None:intergenic | 25.0% |
| ! | ATATTCAACAAATATGGATG+GGG | + | chr2.4:2334624-2334643 | MS.gene89074:CDS | 25.0% |
| ! | CATGTATGATAAAGTTTCAT+TGG | - | chr2.4:2334937-2334956 | None:intergenic | 25.0% |
| ! | GATGTCTTCAAGATATATAA+GGG | + | chr2.4:2334337-2334356 | MS.gene89074:CDS | 25.0% |
| ! | TAGACAAAAGATTACAAATG+AGG | - | chr2.4:2332850-2332869 | None:intergenic | 25.0% |
| ! | TGATGTCTTCAAGATATATA+AGG | + | chr2.4:2334336-2334355 | MS.gene89074:CDS | 25.0% |
| ! | TTAAGATGTTTAACCAAACA+AGG | + | chr2.4:2335249-2335268 | MS.gene89074:intron | 25.0% |
| ! | TTAATCTTGTTGAAGTTACA+TGG | + | chr2.4:2334396-2334415 | MS.gene89074:CDS | 25.0% |
| ! | TTCATCAAGTAATACTTAAG+TGG | + | chr2.4:2332916-2332935 | MS.gene89074:intron | 25.0% |
| ! | TTGTTATCTGTTTCCTTTAT+TGG | + | chr2.4:2333494-2333513 | MS.gene89074:CDS | 25.0% |
| !! | ACTGAGAAACAAAAGTTTTT+AGG | + | chr2.4:2331967-2331986 | MS.gene89074:CDS | 25.0% |
| !! | ATCTAATGTTTTGTCAAAAC+AGG | + | chr2.4:2332191-2332210 | MS.gene89074:CDS | 25.0% |
| !! | CTTACATTTTTGTCTCATTA+TGG | + | chr2.4:2333628-2333647 | MS.gene89074:intron | 25.0% |
| !! | GGTTTTCTCTAACTAATAAT+GGG | + | chr2.4:2331812-2331831 | MS.gene89074:intron | 25.0% |
| !! | TATATCACTTGTTTCAGTTT+TGG | + | chr2.4:2334444-2334463 | MS.gene89074:intron | 25.0% |
| !!! | AAGTTTCAAGTTGTTTATCA+AGG | + | chr2.4:2333110-2333129 | MS.gene89074:intron | 25.0% |
| !!! | AAGTTTGTTAAAGGGATATT+GGG | + | chr2.4:2332801-2332820 | MS.gene89074:intron | 25.0% |
| !!! | GTTCCTTTTATTGCTTTTTT+TGG | + | chr2.4:2332234-2332253 | MS.gene89074:CDS | 25.0% |
| !!! | GTTGTTGTTAAGTTTGTTAA+AGG | + | chr2.4:2332792-2332811 | MS.gene89074:intron | 25.0% |
| !!! | TAAGTTTGTTAAAGGGATAT+TGG | + | chr2.4:2332800-2332819 | MS.gene89074:intron | 25.0% |
| !!! | TCCTTTTATTGCTTTTTTTG+GGG | + | chr2.4:2332236-2332255 | MS.gene89074:CDS | 25.0% |
| AACAAGGATATCAAATAGCT+AGG | - | chr2.4:2334173-2334192 | None:intergenic | 30.0% | |
| AACATAAAACCAATAGCCAT+AGG | - | chr2.4:2332156-2332175 | None:intergenic | 30.0% | |
| AAGCTGTTCTTCAATCAAAA+GGG | + | chr2.4:2331692-2331711 | MS.gene89074:CDS | 30.0% | |
| AATCCAAACTTTCCAATAAC+GGG | - | chr2.4:2334735-2334754 | None:intergenic | 30.0% | |
| AGCACAAAATAGGTACTTTA+CGG | + | chr2.4:2334004-2334023 | MS.gene89074:intron | 30.0% | |
| ATAAAAGACGAGTACTCATT+CGG | - | chr2.4:2334543-2334562 | None:intergenic | 30.0% | |
| ATCAAAAGGTGAACATGTTT+AGG | - | chr2.4:2332599-2332618 | None:intergenic | 30.0% | |
| CAAATTCTCATAATTGCAAG+CGG | - | chr2.4:2332357-2332376 | None:intergenic | 30.0% | |
| CAAGTTGTTTATCAAGGAAT+TGG | + | chr2.4:2333116-2333135 | MS.gene89074:intron | 30.0% | |
| CAATCCAAACTTTCCAATAA+CGG | - | chr2.4:2334736-2334755 | None:intergenic | 30.0% | |
| GAAGTTCTTATTGTTTGTGA+AGG | + | chr2.4:2333251-2333270 | MS.gene89074:intron | 30.0% | |
| GTGTTCTACTTGCAATAATA+TGG | + | chr2.4:2332675-2332694 | MS.gene89074:intron | 30.0% | |
| TAGAAAGAGGAATATGATGT+TGG | + | chr2.4:2333011-2333030 | MS.gene89074:intron | 30.0% | |
| TATCTGTTTCCTTTATTGGT+GGG | + | chr2.4:2333498-2333517 | MS.gene89074:CDS | 30.0% | |
| TCAAGAAGATTATACCACTT+GGG | + | chr2.4:2332007-2332026 | MS.gene89074:CDS | 30.0% | |
| TGATGCAAACTATTAGAAAG+AGG | + | chr2.4:2332998-2333017 | MS.gene89074:intron | 30.0% | |
| TTATCTGTTTCCTTTATTGG+TGG | + | chr2.4:2333497-2333516 | MS.gene89074:CDS | 30.0% | |
| ! | AATGAGTACTCGTCTTTTAT+GGG | + | chr2.4:2334543-2334562 | MS.gene89074:CDS | 30.0% |
| ! | AGGTTTTTAAACCCATCAAA+TGG | + | chr2.4:2331745-2331764 | MS.gene89074:intron | 30.0% |
| ! | GGGTTTTCTCTAACTAATAA+TGG | + | chr2.4:2331811-2331830 | MS.gene89074:intron | 30.0% |
| ! | GTGTTAAAATTTCTTGCTGT+AGG | + | chr2.4:2335331-2335350 | MS.gene89074:intron | 30.0% |
| ! | TCATTCCAATTTTATCGGAT+AGG | + | chr2.4:2333743-2333762 | MS.gene89074:intron | 30.0% |
| ! | TGTGATTTCTGTTCTGTTTT+GGG | + | chr2.4:2332422-2332441 | MS.gene89074:CDS | 30.0% |
| ! | TTCACCCATGTTTTCAAAAA+AGG | - | chr2.4:2332129-2332148 | None:intergenic | 30.0% |
| ! | TTGTGATTTCTGTTCTGTTT+TGG | + | chr2.4:2332421-2332440 | MS.gene89074:CDS | 30.0% |
| ! | TTTTTGTAAGCTCTCCAAAA+CGG | - | chr2.4:2335108-2335127 | None:intergenic | 30.0% |
| !! | AATGCTCATCATTGCTTTTA+GGG | - | chr2.4:2333458-2333477 | None:intergenic | 30.0% |
| !! | ATTTGATGGGTTTAAAAACC+TGG | - | chr2.4:2331746-2331765 | None:intergenic | 30.0% |
| !! | CAAATACTTTTCTAGTCTGA+GGG | + | chr2.4:2333396-2333415 | MS.gene89074:CDS | 30.0% |
| !! | TCAAATACTTTTCTAGTCTG+AGG | + | chr2.4:2333395-2333414 | MS.gene89074:CDS | 30.0% |
| !! | TTCTCTAACTAATAATGGGT+TGG | + | chr2.4:2331816-2331835 | MS.gene89074:intron | 30.0% |
| !!! | ATCGAAGACATTAGCTTTTA+AGG | - | chr2.4:2331860-2331879 | None:intergenic | 30.0% |
| AAAGCCTGAACAACTACTTA+TGG | - | chr2.4:2333211-2333230 | None:intergenic | 35.0% | |
| AACTTCATGATGAGCTAGTT+CGG | - | chr2.4:2333237-2333256 | None:intergenic | 35.0% | |
| AATAGGTACTTTACGGAGTA+TGG | + | chr2.4:2334011-2334030 | MS.gene89074:intron | 35.0% | |
| AATTGTTCACCCACCAATAA+AGG | - | chr2.4:2333510-2333529 | None:intergenic | 35.0% | |
| ACATCGTTATGGATTCTTTC+AGG | + | chr2.4:2334274-2334293 | MS.gene89074:intron | 35.0% | |
| ACTGAGAATGAAGATGAAGA+TGG | + | chr2.4:2335611-2335630 | MS.gene89074:CDS | 35.0% | |
| AGATACATGCTATCATGTGA+CGG | + | chr2.4:2332942-2332961 | MS.gene89074:intron | 35.0% | |
| AGCTAATTCAACTCCATACT+TGG | + | chr2.4:2335451-2335470 | MS.gene89074:CDS | 35.0% | |
| ATGAGCAACTATATGGACAA+TGG | - | chr2.4:2333592-2333611 | None:intergenic | 35.0% | |
| ATTTGATCCGTGCAAAGAAA+TGG | + | chr2.4:2334827-2334846 | MS.gene89074:CDS | 35.0% | |
| CAAAAAAACATCATCCCAAG+TGG | - | chr2.4:2332024-2332043 | None:intergenic | 35.0% | |
| CAAATCCCAAAATCATTGGT+GGG | + | chr2.4:2331791-2331810 | MS.gene89074:intron | 35.0% | |
| CAGGAGATGTAACAAATGAA+TGG | - | chr2.4:2335059-2335078 | None:intergenic | 35.0% | |
| CAGTACAATGAGCAACTATA+TGG | - | chr2.4:2333599-2333618 | None:intergenic | 35.0% | |
| CGCTTGCAATTATGAGAATT+TGG | + | chr2.4:2332355-2332374 | MS.gene89074:CDS | 35.0% | |
| CGGATCAAATAAACTGTACT+TGG | - | chr2.4:2334817-2334836 | None:intergenic | 35.0% | |
| CTAGAAAGCTAGCACAAAAT+AGG | + | chr2.4:2333994-2334013 | MS.gene89074:intron | 35.0% | |
| CTCAAGAAGATTATACCACT+TGG | + | chr2.4:2332006-2332025 | MS.gene89074:CDS | 35.0% | |
| GAAGCTGTTCTTCAATCAAA+AGG | + | chr2.4:2331691-2331710 | MS.gene89074:CDS | 35.0% | |
| GATAACCTTCTTAGTATCCT+TGG | + | chr2.4:2332315-2332334 | MS.gene89074:CDS | 35.0% | |
| GCCCCAAAAAAAGCAATAAA+AGG | - | chr2.4:2332240-2332259 | None:intergenic | 35.0% | |
| GCTAATTCAACTCCATACTT+GGG | + | chr2.4:2335452-2335471 | MS.gene89074:CDS | 35.0% | |
| GTTTCCATAAGTAGTTGTTC+AGG | + | chr2.4:2333204-2333223 | MS.gene89074:intron | 35.0% | |
| TAAAAGACGAGTACTCATTC+GGG | - | chr2.4:2334542-2334561 | None:intergenic | 35.0% | |
| TACTGCTATAAACACCTGTA+AGG | + | chr2.4:2335082-2335101 | MS.gene89074:intron | 35.0% | |
| TAGCTAGTGAACCAAAAGTT+AGG | - | chr2.4:2335436-2335455 | None:intergenic | 35.0% | |
| TCACCAAATCCCAAAATCAT+TGG | + | chr2.4:2331787-2331806 | MS.gene89074:intron | 35.0% | |
| TCACCTGCTTCTGTATATAA+AGG | - | chr2.4:2335647-2335666 | None:intergenic | 35.0% | |
| TCCATCCTATCCGATAAAAT+TGG | - | chr2.4:2333751-2333770 | None:intergenic | 35.0% | |
| TGAGACAAAAATGTAAGCAG+TGG | - | chr2.4:2333625-2333644 | None:intergenic | 35.0% | |
| TTATGTCATGGCTGAATTGT+GGG | + | chr2.4:2332392-2332411 | MS.gene89074:CDS | 35.0% | |
| TTTATGTCATGGCTGAATTG+TGG | + | chr2.4:2332391-2332410 | MS.gene89074:CDS | 35.0% | |
| ! | AAGCTATTCTAGAGAGATTG+CGG | - | chr2.4:2335170-2335189 | None:intergenic | 35.0% |
| ! | AATTTCTTGCTGTAGGTCAA+AGG | + | chr2.4:2335338-2335357 | MS.gene89074:intron | 35.0% |
| ! | AGAAAACCCACCAATGATTT+TGG | - | chr2.4:2331800-2331819 | None:intergenic | 35.0% |
| ! | AGCTTTCTAGTCTTCGATTT+CGG | - | chr2.4:2333984-2334003 | None:intergenic | 35.0% |
| ! | ATGTAGTACTGAACAGCTAA+TGG | + | chr2.4:2334034-2334053 | MS.gene89074:intron | 35.0% |
| ! | ATTTCTTGCTGTAGGTCAAA+GGG | + | chr2.4:2335339-2335358 | MS.gene89074:intron | 35.0% |
| ! | CAGTTCATGATCCTAACTTT+TGG | + | chr2.4:2335422-2335441 | MS.gene89074:CDS | 35.0% |
| ! | CTTGCTGAATATGTTTTGCA+AGG | - | chr2.4:2334790-2334809 | None:intergenic | 35.0% |
| ! | GAAAACCCACCAATGATTTT+GGG | - | chr2.4:2331799-2331818 | None:intergenic | 35.0% |
| ! | GAATGAGTACTCGTCTTTTA+TGG | + | chr2.4:2334542-2334561 | MS.gene89074:CDS | 35.0% |
| ! | GTGATTTCTGTTCTGTTTTG+GGG | + | chr2.4:2332423-2332442 | MS.gene89074:CDS | 35.0% |
| ! | TCCAATTTTATCGGATAGGA+TGG | + | chr2.4:2333747-2333766 | MS.gene89074:intron | 35.0% |
| ! | TGGGTTTAAAAACCTGGTTT+TGG | - | chr2.4:2331740-2331759 | None:intergenic | 35.0% |
| ! | TGTGCTTTAAGCCATTTGAT+GGG | - | chr2.4:2331759-2331778 | None:intergenic | 35.0% |
| !! | AGATTCAGATGGACTAATGA+AGG | - | chr2.4:2335672-2335691 | None:intergenic | 35.0% |
| !! | CAATGCTCATCATTGCTTTT+AGG | - | chr2.4:2333459-2333478 | None:intergenic | 35.0% |
| !! | GGGTTTAAAAACCTGGTTTT+GGG | - | chr2.4:2331739-2331758 | None:intergenic | 35.0% |
| !! | TGATTTCTGTTCTGTTTTGG+GGG | + | chr2.4:2332424-2332443 | MS.gene89074:CDS | 35.0% |
| !! | TTTTGGTGATTGTTCTTGCA+TGG | + | chr2.4:2335483-2335502 | MS.gene89074:CDS | 35.0% |
| !!! | ATTGCTTTTTTTGGGGCTTT+TGG | + | chr2.4:2332243-2332262 | MS.gene89074:CDS | 35.0% |
| !!! | GGTTTAAAAACCTGGTTTTG+GGG | - | chr2.4:2331738-2331757 | None:intergenic | 35.0% |
| !!! | TTGCTTTTTTTGGGGCTTTT+GGG | + | chr2.4:2332244-2332263 | MS.gene89074:CDS | 35.0% |
| AAACTGAGTGTCAAGTGACT+TGG | - | chr2.4:2335519-2335538 | None:intergenic | 40.0% | |
| AACATGGGTGAATCTTCCTA+TGG | + | chr2.4:2332137-2332156 | MS.gene89074:CDS | 40.0% | |
| AACCCATTAGGAAAATCTGG+TGG | + | chr2.4:2335386-2335405 | MS.gene89074:CDS | 40.0% | |
| AAGCGATTCTATCCACTGTT+TGG | + | chr2.4:2333331-2333350 | MS.gene89074:CDS | 40.0% | |
| AATGTTGCCCTTGTATTCTC+CGG | + | chr2.4:2333364-2333383 | MS.gene89074:CDS | 40.0% | |
| AATTCAACTCCATACTTGGG+AGG | + | chr2.4:2335455-2335474 | MS.gene89074:CDS | 40.0% | |
| ACATATACAGCAGCTAGCAA+TGG | - | chr2.4:2334762-2334781 | None:intergenic | 40.0% | |
| ACTTCATGATGAGCTAGTTC+GGG | - | chr2.4:2333236-2333255 | None:intergenic | 40.0% | |
| AGAAGAACTCGAGAAAGAGT+TGG | + | chr2.4:2335556-2335575 | MS.gene89074:CDS | 40.0% | |
| AGGTTATCAGCAAATGCTTG+AGG | - | chr2.4:2332303-2332322 | None:intergenic | 40.0% | |
| ATGTAGGCCATTTCTTTGCA+CGG | - | chr2.4:2334837-2334856 | None:intergenic | 40.0% | |
| CCAAATCCCAAAATCATTGG+TGG | + | chr2.4:2331790-2331809 | MS.gene89074:intron | 40.0% | |
| GAAATCAAAGCTCAAAGCTC+AGG | + | chr2.4:2334418-2334437 | MS.gene89074:CDS | 40.0% | |
| GAAGAGAAGAGTTCAAACCT+TGG | - | chr2.4:2334877-2334896 | None:intergenic | 40.0% | |
| GATGTTGTATGCAACCCATT+AGG | + | chr2.4:2335374-2335393 | MS.gene89074:CDS | 40.0% | |
| GCACCTTTATATACAGAAGC+AGG | + | chr2.4:2335641-2335660 | MS.gene89074:CDS | 40.0% | |
| GGAAAGAGAAACTGCTGTTA+AGG | + | chr2.4:2335577-2335596 | MS.gene89074:CDS | 40.0% | |
| GGGTGAATATAGTTGCTAAG+AGG | - | chr2.4:2332282-2332301 | None:intergenic | 40.0% | |
| GGTGTTTATAGCAGTAGTTC+AGG | - | chr2.4:2335078-2335097 | None:intergenic | 40.0% | |
| GGTTATCAGCAAATGCTTGA+GGG | - | chr2.4:2332302-2332321 | None:intergenic | 40.0% | |
| GTGAATCTTCCTATGGCTAT+TGG | + | chr2.4:2332144-2332163 | MS.gene89074:CDS | 40.0% | |
| TATGTCATGGCTGAATTGTG+GGG | + | chr2.4:2332393-2332412 | MS.gene89074:CDS | 40.0% | |
| TCCATATGCAACCACTAATG+TGG | - | chr2.4:2334369-2334388 | None:intergenic | 40.0% | |
| TCTAGTCTGAGGGAAACTTT+AGG | + | chr2.4:2333406-2333425 | MS.gene89074:CDS | 40.0% | |
| TCTTCATTCTCAGTCAACAC+TGG | - | chr2.4:2335605-2335624 | None:intergenic | 40.0% | |
| TGCAACCCATTAGGAAAATC+TGG | + | chr2.4:2335383-2335402 | MS.gene89074:CDS | 40.0% | |
| TGGGTTGCATACAACATCAA+TGG | - | chr2.4:2335372-2335391 | None:intergenic | 40.0% | |
| TTCGATTTCGGTTAAGCAGT+GGG | - | chr2.4:2333972-2333991 | None:intergenic | 40.0% | |
| TTCTATCCACTGTTTGGACT+TGG | + | chr2.4:2333337-2333356 | MS.gene89074:CDS | 40.0% | |
| TTGCTAGCTGCTGTATATGT+TGG | + | chr2.4:2334762-2334781 | MS.gene89074:CDS | 40.0% | |
| TTTCAGGAGAAGCCGAAAAT+GGG | + | chr2.4:2334290-2334309 | MS.gene89074:intron | 40.0% | |
| ! | AAAGTATTTGACTGTCCGAC+CGG | - | chr2.4:2333386-2333405 | None:intergenic | 40.0% |
| ! | AATTTCCAGAGGTGTGTATG+AGG | - | chr2.4:2334505-2334524 | None:intergenic | 40.0% |
| ! | ACAGCTAATGGAAAGCATAC+AGG | + | chr2.4:2334046-2334065 | MS.gene89074:intron | 40.0% |
| ! | ATGAGCATTGTTGTCGGTAT+GGG | + | chr2.4:2333469-2333488 | MS.gene89074:CDS | 40.0% |
| ! | ATTTCCAGAGGTGTGTATGA+GGG | - | chr2.4:2334504-2334523 | None:intergenic | 40.0% |
| ! | CACCACCAGATTTTCCTAAT+GGG | - | chr2.4:2335391-2335410 | None:intergenic | 40.0% |
| ! | CTCTCCATTGTTCCCATTTT+CGG | - | chr2.4:2334305-2334324 | None:intergenic | 40.0% |
| ! | CTGTGCTTTAAGCCATTTGA+TGG | - | chr2.4:2331760-2331779 | None:intergenic | 40.0% |
| ! | GCAATGATGAGCATTGTTGT+CGG | + | chr2.4:2333463-2333482 | MS.gene89074:CDS | 40.0% |
| !! | CATCATTGCTTTTAGGGAGA+TGG | - | chr2.4:2333452-2333471 | None:intergenic | 40.0% |
| !! | TGATGGTGAAGCAGTTTTTG+AGG | + | chr2.4:2331936-2331955 | MS.gene89074:CDS | 40.0% |
| !! | TGGAGTATTAAGGCCTTGTT+TGG | - | chr2.4:2335265-2335284 | None:intergenic | 40.0% |
| !!! | CCACCAATGATTTTGGGATT+TGG | - | chr2.4:2331793-2331812 | None:intergenic | 40.0% |
| AACCTTGGTATCCTCATCCA+AGG | - | chr2.4:2334862-2334881 | None:intergenic | 45.0% | |
| AAGGGATCTTGCCACATTAG+TGG | + | chr2.4:2334355-2334374 | MS.gene89074:CDS | 45.0% | |
| ACCTTGGTATCCTCATCCAA+GGG | - | chr2.4:2334861-2334880 | None:intergenic | 45.0% | |
| ACTTTAGGTCCTGGAGTTGA+TGG | + | chr2.4:2333421-2333440 | MS.gene89074:CDS | 45.0% | |
| AGAAATGGCCTACATACCCT+TGG | + | chr2.4:2334842-2334861 | MS.gene89074:CDS | 45.0% | |
| ATACAGGATCTGTCCCTGAA+GGG | + | chr2.4:2334062-2334081 | MS.gene89074:intron | 45.0% | |
| ATGGTGCAAGTTAGCACGAA+AGG | - | chr2.4:2334096-2334115 | None:intergenic | 45.0% | |
| ATGTCATGGCTGAATTGTGG+GGG | + | chr2.4:2332394-2332413 | MS.gene89074:CDS | 45.0% | |
| CCAGCTAAACGATACCCAAA+TGG | + | chr2.4:2333940-2333959 | MS.gene89074:intron | 45.0% | |
| CGTTTAGCTGGCTAAGTTGT+CGG | - | chr2.4:2333931-2333950 | None:intergenic | 45.0% | |
| CTACTACACCACACTACACT+CGG | - | chr2.4:2333830-2333849 | None:intergenic | 45.0% | |
| CTTCGATTTCGGTTAAGCAG+TGG | - | chr2.4:2333973-2333992 | None:intergenic | 45.0% | |
| CTTTCAGGAGAAGCCGAAAA+TGG | + | chr2.4:2334289-2334308 | MS.gene89074:intron | 45.0% | |
| GAAGCCGAAAATGGGAACAA+TGG | + | chr2.4:2334298-2334317 | MS.gene89074:CDS | 45.0% | |
| GAATCGCTTTGCCTCATCAA+CGG | - | chr2.4:2333320-2333339 | None:intergenic | 45.0% | |
| GCACCCGTTATTGGAAAGTT+TGG | + | chr2.4:2334729-2334748 | MS.gene89074:CDS | 45.0% | |
| GCCACATTAGTGGTTGCATA+TGG | + | chr2.4:2334365-2334384 | MS.gene89074:CDS | 45.0% | |
| GCTTACAAGCATCATCGTGA+AGG | - | chr2.4:2334598-2334617 | None:intergenic | 45.0% | |
| GGAAACTGCACAATTTCCAG+AGG | - | chr2.4:2334516-2334535 | None:intergenic | 45.0% | |
| GGAGAATACAAGGGCAACAT+TGG | - | chr2.4:2333365-2333384 | None:intergenic | 45.0% | |
| GTGTAGTAGTTGGCACTTCT+AGG | + | chr2.4:2333841-2333860 | MS.gene89074:intron | 45.0% | |
| GTGTAGTGTGGTGTAGTAGT+TGG | + | chr2.4:2333831-2333850 | MS.gene89074:intron | 45.0% | |
| TCGATTTCGGTTAAGCAGTG+GGG | - | chr2.4:2333971-2333990 | None:intergenic | 45.0% | |
| TTCTTAGTATCCTTGGACCG+CGG | + | chr2.4:2332322-2332341 | MS.gene89074:CDS | 45.0% | |
| ! | AAAAGCACACCTCCCAAGTA+TGG | - | chr2.4:2335467-2335486 | None:intergenic | 45.0% |
| ! | AAACACCTGTAAGGCCGTTT+TGG | + | chr2.4:2335091-2335110 | MS.gene89074:intron | 45.0% |
| ! | AAAGGCAAAGTGTCCCTTCA+GGG | - | chr2.4:2334078-2334097 | None:intergenic | 45.0% |
| ! | ATCCTCATCCAAGGGTATGT+AGG | - | chr2.4:2334853-2334872 | None:intergenic | 45.0% |
| ! | CCATTTGGGTATCGTTTAGC+TGG | - | chr2.4:2333943-2333962 | None:intergenic | 45.0% |
| ! | GATGAGCATTGTTGTCGGTA+TGG | + | chr2.4:2333468-2333487 | MS.gene89074:CDS | 45.0% |
| ! | GCACCACCAGATTTTCCTAA+TGG | - | chr2.4:2335392-2335411 | None:intergenic | 45.0% |
| ! | GTTCTTGTTGTGACTGCTAG+AGG | + | chr2.4:2332084-2332103 | MS.gene89074:CDS | 45.0% |
| ! | TCCAGTTGTTTGGGGTACTA+CGG | + | chr2.4:2333887-2333906 | MS.gene89074:intron | 45.0% |
| !! | ATACTTGGGAGGTGTGCTTT+TGG | + | chr2.4:2335466-2335485 | MS.gene89074:CDS | 45.0% |
| !! | CTTTTTCTTCTGGCTACGAG+CGG | - | chr2.4:2333545-2333564 | None:intergenic | 45.0% |
| !! | TTTTTCTTCTGGCTACGAGC+GGG | - | chr2.4:2333544-2333563 | None:intergenic | 45.0% |
| !!! | AAACCTGGTTTTGGGGTTTG+TGG | - | chr2.4:2331731-2331750 | None:intergenic | 45.0% |
| !!! | AACCTGGTTTTGGGGTTTGT+GGG | - | chr2.4:2331730-2331749 | None:intergenic | 45.0% |
| AAAGCTGAAGCAGCTTCTGC+TGG | + | chr2.4:2331907-2331926 | MS.gene89074:CDS | 50.0% | |
| AACCAACTCCAGTCATGAGC+AGG | - | chr2.4:2334677-2334696 | None:intergenic | 50.0% | |
| AACTCCAGTCATGAGCAGGA+CGG | - | chr2.4:2334673-2334692 | None:intergenic | 50.0% | |
| ACATGCTATCATGTGACGGC+TGG | + | chr2.4:2332946-2332965 | MS.gene89074:intron | 50.0% | |
| ACCCTTGGATGAGGATACCA+AGG | + | chr2.4:2334857-2334876 | MS.gene89074:CDS | 50.0% | |
| ACTGGACCACTCCAGTTGTT+TGG | + | chr2.4:2333877-2333896 | MS.gene89074:intron | 50.0% | |
| AGCAGTGGGGTTTGACCATT+TGG | - | chr2.4:2333958-2333977 | None:intergenic | 50.0% | |
| AGTACCCCAAACAACTGGAG+TGG | - | chr2.4:2333886-2333905 | None:intergenic | 50.0% | |
| CATACAGGATCTGTCCCTGA+AGG | + | chr2.4:2334061-2334080 | MS.gene89074:intron | 50.0% | |
| CGCTCGTAGCCAGAAGAAAA+AGG | + | chr2.4:2333543-2333562 | MS.gene89074:CDS | 50.0% | |
| CTGAGGGAAACTTTAGGTCC+TGG | + | chr2.4:2333412-2333431 | MS.gene89074:CDS | 50.0% | |
| CTGGACCACTCCAGTTGTTT+GGG | + | chr2.4:2333878-2333897 | MS.gene89074:intron | 50.0% | |
| GAAGGTAGCGATTCCAGTTG+CGG | - | chr2.4:2334580-2334599 | None:intergenic | 50.0% | |
| GCAGATAACCACCGTTGATG+AGG | + | chr2.4:2333306-2333325 | MS.gene89074:intron | 50.0% | |
| GCAGTGGGGTTTGACCATTT+GGG | - | chr2.4:2333957-2333976 | None:intergenic | 50.0% | |
| GCGGTCCAAGGATACTAAGA+AGG | - | chr2.4:2332323-2332342 | None:intergenic | 50.0% | |
| TCCGTAGTACCCCAAACAAC+TGG | - | chr2.4:2333891-2333910 | None:intergenic | 50.0% | |
| TGGACCACTCCAGTTGTTTG+GGG | + | chr2.4:2333879-2333898 | MS.gene89074:intron | 50.0% | |
| TGTCCGACCGGAGAATACAA+GGG | - | chr2.4:2333374-2333393 | None:intergenic | 50.0% | |
| TTCCCACAAACCCCAAAACC+AGG | + | chr2.4:2331725-2331744 | MS.gene89074:CDS | 50.0% | |
| TTCTCCCTCATACACACCTC+TGG | + | chr2.4:2334497-2334516 | MS.gene89074:intron | 50.0% | |
| TTCTTCTTCGCGACGCAATG+CGG | - | chr2.4:2335543-2335562 | None:intergenic | 50.0% | |
| TTGCCCTTGTATTCTCCGGT+CGG | + | chr2.4:2333368-2333387 | MS.gene89074:CDS | 50.0% | |
| TTGGCTCCAAGTCCAAACAG+TGG | - | chr2.4:2333346-2333365 | None:intergenic | 50.0% | |
| ! | CTTGCTGTAGGTCAAAGGGA+AGG | + | chr2.4:2335343-2335362 | MS.gene89074:intron | 50.0% |
| ! | GAAAGGCAAAGTGTCCCTTC+AGG | - | chr2.4:2334079-2334098 | None:intergenic | 50.0% |
| ! | GCTAAGTTGTCGGCTGTCAT+TGG | - | chr2.4:2333921-2333940 | None:intergenic | 50.0% |
| !! | AGGTCCTGGAGTTGATGGTT+GGG | + | chr2.4:2333426-2333445 | MS.gene89074:CDS | 50.0% |
| !! | TAGGTCCTGGAGTTGATGGT+TGG | + | chr2.4:2333425-2333444 | MS.gene89074:CDS | 50.0% |
| !! | TTTCCAATAACGGGTGCGAG+TGG | - | chr2.4:2334726-2334745 | None:intergenic | 50.0% |
| AACTGGAGTGGTCCAGTAGC+TGG | - | chr2.4:2333874-2333893 | None:intergenic | 55.0% | |
| AAGCTCCCTTCACTCTGCCA+GGG | + | chr2.4:2333770-2333789 | MS.gene89074:intron | 55.0% | |
| ACTGGAGTGGTCCAGTAGCT+GGG | - | chr2.4:2333873-2333892 | None:intergenic | 55.0% | |
| AGTGGTCCAGTAGCTGGGAA+GGG | - | chr2.4:2333868-2333887 | None:intergenic | 55.0% | |
| ATCCTTGGACCGCGGTTTCT+TGG | + | chr2.4:2332330-2332349 | MS.gene89074:CDS | 55.0% | |
| ATGGCCCAACCATCAACTCC+AGG | - | chr2.4:2333433-2333452 | None:intergenic | 55.0% | |
| CTGTCCGACCGGAGAATACA+AGG | - | chr2.4:2333375-2333394 | None:intergenic | 55.0% | |
| GAAGCAGCTTCTGCTGGTGT+TGG | + | chr2.4:2331913-2331932 | MS.gene89074:CDS | 55.0% | |
| GACGAGTACTCATTCGGGCT+AGG | - | chr2.4:2334537-2334556 | None:intergenic | 55.0% | |
| GATCCACTCGCACCCGTTAT+TGG | + | chr2.4:2334720-2334739 | MS.gene89074:CDS | 55.0% | |
| GCTCTCCAAAACGGCCTTAC+AGG | - | chr2.4:2335099-2335118 | None:intergenic | 55.0% | |
| GGCCTACATACCCTTGGATG+AGG | + | chr2.4:2334848-2334867 | MS.gene89074:CDS | 55.0% | |
| GGCGATTTCTCAACCGCAAC+TGG | + | chr2.4:2334564-2334583 | MS.gene89074:CDS | 55.0% | |
| GTCCTGCTCATGACTGGAGT+TGG | + | chr2.4:2334672-2334691 | MS.gene89074:CDS | 55.0% | |
| GTGTAGAGCCGAGTGTAGTG+TGG | + | chr2.4:2333819-2333838 | MS.gene89074:intron | 55.0% | |
| TCGCTTTGCCTCATCAACGG+TGG | - | chr2.4:2333317-2333336 | None:intergenic | 55.0% | |
| ! | TGTCGGCTGTCATTGGCAGA+GGG | - | chr2.4:2333914-2333933 | None:intergenic | 55.0% |
| ! | TTGTCGGCTGTCATTGGCAG+AGG | - | chr2.4:2333915-2333934 | None:intergenic | 55.0% |
| !! | GCTTCTGCTGGTGTTGGTGA+TGG | + | chr2.4:2331919-2331938 | MS.gene89074:CDS | 55.0% |
| !!! | GTTTTGGGGGCTTGCCAATC+AGG | + | chr2.4:2332437-2332456 | MS.gene89074:CDS | 55.0% |
| ACTCTGCCAGGGACTGGACA+GGG | + | chr2.4:2333781-2333800 | MS.gene89074:intron | 60.0% | |
| CCAGTCATGAGCAGGACGGT+AGG | - | chr2.4:2334669-2334688 | None:intergenic | 60.0% | |
| CCAGTCCCTGGCAGAGTGAA+GGG | - | chr2.4:2333778-2333797 | None:intergenic | 60.0% | |
| CCTACCGTCCTGCTCATGAC+TGG | + | chr2.4:2334666-2334685 | MS.gene89074:CDS | 60.0% | |
| GAAGCTCCCTTCACTCTGCC+AGG | + | chr2.4:2333769-2333788 | MS.gene89074:intron | 60.0% | |
| GACCAAGAAACCGCGGTCCA+AGG | - | chr2.4:2332335-2332354 | None:intergenic | 60.0% | |
| GAGTGGTCCAGTAGCTGGGA+AGG | - | chr2.4:2333869-2333888 | None:intergenic | 60.0% | |
| GCAAGCGGACCAAGAAACCG+CGG | - | chr2.4:2332342-2332361 | None:intergenic | 60.0% | |
| GTGGTCCAGTAGCTGGGAAG+GGG | - | chr2.4:2333867-2333886 | None:intergenic | 60.0% | |
| TCCAGTCCCTGGCAGAGTGA+AGG | - | chr2.4:2333779-2333798 | None:intergenic | 60.0% | |
| ! | TTCTGGCTACGAGCGGGAAG+AGG | - | chr2.4:2333538-2333557 | None:intergenic | 60.0% |
| CACTCTGCCAGGGACTGGAC+AGG | + | chr2.4:2333780-2333799 | MS.gene89074:intron | 65.0% | |
| CCCTTCACTCTGCCAGGGAC+TGG | + | chr2.4:2333775-2333794 | MS.gene89074:intron | 65.0% | |
| CTAGGCCCCTTCCCAGCTAC+TGG | + | chr2.4:2333859-2333878 | MS.gene89074:intron | 65.0% | |
| CTCTGCCAGGGACTGGACAG+GGG | + | chr2.4:2333782-2333801 | MS.gene89074:intron | 65.0% | |
| GCTAACCCCTGTCCAGTCCC+TGG | - | chr2.4:2333790-2333809 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 2331688 | 2335694 | 2331688 | ID=MS.gene89074 |
| chr2.4 | mRNA | 2331688 | 2335694 | 2331688 | ID=MS.gene89074.t1;Parent=MS.gene89074 |
| chr2.4 | exon | 2331688 | 2331746 | 2331688 | ID=MS.gene89074.t1.exon1;Parent=MS.gene89074.t1 |
| chr2.4 | CDS | 2331688 | 2331746 | 2331688 | ID=cds.MS.gene89074.t1;Parent=MS.gene89074.t1 |
| chr2.4 | exon | 2331852 | 2332458 | 2331852 | ID=MS.gene89074.t1.exon2;Parent=MS.gene89074.t1 |
| chr2.4 | CDS | 2331852 | 2332458 | 2331852 | ID=cds.MS.gene89074.t1;Parent=MS.gene89074.t1 |
| chr2.4 | exon | 2333310 | 2333564 | 2333310 | ID=MS.gene89074.t1.exon3;Parent=MS.gene89074.t1 |
| chr2.4 | CDS | 2333310 | 2333564 | 2333310 | ID=cds.MS.gene89074.t1;Parent=MS.gene89074.t1 |
| chr2.4 | exon | 2334296 | 2334439 | 2334296 | ID=MS.gene89074.t1.exon4;Parent=MS.gene89074.t1 |
| chr2.4 | CDS | 2334296 | 2334439 | 2334296 | ID=cds.MS.gene89074.t1;Parent=MS.gene89074.t1 |
| chr2.4 | exon | 2334531 | 2334878 | 2334531 | ID=MS.gene89074.t1.exon5;Parent=MS.gene89074.t1 |
| chr2.4 | CDS | 2334531 | 2334878 | 2334531 | ID=cds.MS.gene89074.t1;Parent=MS.gene89074.t1 |
| chr2.4 | exon | 2335353 | 2335694 | 2335353 | ID=MS.gene89074.t1.exon6;Parent=MS.gene89074.t1 |
| chr2.4 | CDS | 2335353 | 2335694 | 2335353 | ID=cds.MS.gene89074.t1;Parent=MS.gene89074.t1 |
| Gene Sequence |
| Protein sequence |
