Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09417.t1 | XP_024630507.1 | 97.5 | 240 | 6 | 0 | 1 | 240 | 1085 | 1324 | 3.90E-124 | 454.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09417.t1 | F4JVN6 | 62.5 | 240 | 83 | 1 | 1 | 240 | 1148 | 1380 | 8.4e-75 | 281.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09417.t1 | A0A072TIB9 | 97.5 | 240 | 6 | 0 | 1 | 240 | 1085 | 1324 | 2.8e-124 | 454.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene09417 | 0.835359 | 1.76E-56 | -1.69E-46 |
| MS.gene049567 | MS.gene09417 | 0.815833 | 7.55E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene09417 | 0.829802 | 4.20E-55 | -1.69E-46 |
| MS.gene049873 | MS.gene09417 | 0.830342 | 3.10E-55 | -1.69E-46 |
| MS.gene050026 | MS.gene09417 | 0.837811 | 4.17E-57 | -1.69E-46 |
| MS.gene050029 | MS.gene09417 | 0.807089 | 5.99E-50 | -1.69E-46 |
| MS.gene050031 | MS.gene09417 | 0.814257 | 1.69E-51 | -1.69E-46 |
| MS.gene050043 | MS.gene09417 | 0.806956 | 6.40E-50 | -1.69E-46 |
| MS.gene050201 | MS.gene09417 | 0.82975 | 4.32E-55 | -1.69E-46 |
| MS.gene050355 | MS.gene09417 | 0.815265 | 1.01E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene09417 | 0.816723 | 4.77E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene09417 | 0.818414 | 1.98E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene09417 | 0.818618 | 1.78E-52 | -1.69E-46 |
| MS.gene050799 | MS.gene09417 | 0.807665 | 4.52E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene09417 | 0.802517 | 5.40E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene09417 | 0.809987 | 1.44E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene09417 | 0.828437 | 9.00E-55 | -1.69E-46 |
| MS.gene052208 | MS.gene09417 | 0.802469 | 5.53E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene09417 | -0.868221 | 7.67E-66 | -1.69E-46 |
| MS.gene052361 | MS.gene09417 | -0.82358 | 1.28E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene09417 | 0.839222 | 1.80E-57 | -1.69E-46 |
| MS.gene052582 | MS.gene09417 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene09417 | 0.814621 | 1.40E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene09417 | 0.803599 | 3.23E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene09417 | 0.802249 | 6.14E-49 | -1.69E-46 |
| MS.gene053145 | MS.gene09417 | 0.800724 | 1.26E-48 | -1.69E-46 |
| MS.gene053883 | MS.gene09417 | 0.809837 | 1.55E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene09417 | 0.822693 | 2.07E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene09417 | 0.837424 | 5.24E-57 | -1.69E-46 |
| MS.gene054236 | MS.gene09417 | 0.801411 | 9.12E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene09417 | 0.802953 | 4.39E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene09417 | -0.823662 | 1.23E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene09417 | 0.813529 | 2.44E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene09417 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene055589 | MS.gene09417 | 0.803601 | 3.23E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene09417 | 0.811212 | 7.84E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene09417 | 0.821145 | 4.72E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene09417 | 0.81653 | 5.27E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene09417 | 0.858122 | 1.02E-62 | -1.69E-46 |
| MS.gene057027 | MS.gene09417 | 0.828905 | 6.93E-55 | -1.69E-46 |
| MS.gene057414 | MS.gene09417 | 0.821439 | 4.04E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene09417 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene057921 | MS.gene09417 | 0.800873 | 1.17E-48 | -1.69E-46 |
| MS.gene058037 | MS.gene09417 | 0.834259 | 3.32E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene09417 | 0.83366 | 4.69E-56 | -1.69E-46 |
| MS.gene058635 | MS.gene09417 | 0.807117 | 5.91E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene09417 | 0.80195 | 7.07E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene09417 | 0.808588 | 2.88E-50 | -1.69E-46 |
| MS.gene059015 | MS.gene09417 | 0.817144 | 3.84E-52 | -1.69E-46 |
| MS.gene059272 | MS.gene09417 | 0.842406 | 2.64E-58 | -1.69E-46 |
| MS.gene05954 | MS.gene09417 | 0.831199 | 1.91E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene09417 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene09417 | 0.816173 | 6.34E-52 | -1.69E-46 |
| MS.gene060373 | MS.gene09417 | 0.813291 | 2.76E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene09417 | 0.824846 | 6.47E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene09417 | 0.836915 | 7.07E-57 | -1.69E-46 |
| MS.gene060840 | MS.gene09417 | 0.812083 | 5.07E-51 | -1.69E-46 |
| MS.gene060879 | MS.gene09417 | 0.807388 | 5.18E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene09417 | -0.854039 | 1.60E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09417.t1 | MTR_0025s0060 | 97.500 | 240 | 6 | 0 | 1 | 240 | 1085 | 1324 | 6.76e-158 | 471 |
| MS.gene09417.t1 | MTR_0025s0060 | 93.227 | 251 | 6 | 1 | 1 | 240 | 1085 | 1335 | 2.43e-154 | 462 |
| MS.gene09417.t1 | MTR_1g101030 | 71.951 | 246 | 63 | 1 | 1 | 240 | 1124 | 1369 | 4.10e-105 | 331 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09417.t1 | AT4G20850 | 63.333 | 240 | 81 | 1 | 1 | 240 | 1148 | 1380 | 1.66e-89 | 288 |
Find 49 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTAAAAGCTCTAACCTTTA+AGG | 0.136973 | 6.4:-22234747 | None:intergenic |
| GCAAGCAATGAAGTGTATTT+TGG | 0.165230 | 6.4:-22231953 | None:intergenic |
| TTCATTGCTTGCGAAGATTT+TGG | 0.203798 | 6.4:+22231964 | MS.gene09417:CDS |
| CTGCCAGCGCGAGCCCCTTT+TGG | 0.236238 | 6.4:-22234715 | None:intergenic |
| GGCAGAGATTGAATCCTTAA+AGG | 0.284906 | 6.4:+22234733 | MS.gene09417:CDS |
| GGTACAGTGCCTCTGCTAAC+TGG | 0.321623 | 6.4:-22234694 | None:intergenic |
| TAGCTCATAGAGTTTCTTCT+TGG | 0.331975 | 6.4:-22236626 | None:intergenic |
| ACCTCTGCATCGTCGTCTTC+TGG | 0.362448 | 6.4:-22232807 | None:intergenic |
| CTCTCATTACTTGATGAGAT+TGG | 0.362502 | 6.4:+22236652 | MS.gene09417:CDS |
| TAATCTCACTGCAGAATAAC+AGG | 0.371747 | 6.4:+22234648 | MS.gene09417:intron |
| GATGTAAAGTCATCTAAATA+TGG | 0.404685 | 6.4:+22235645 | MS.gene09417:CDS |
| TCATAGAGTTTCTTCTTGGC+AGG | 0.408256 | 6.4:-22236622 | None:intergenic |
| GGCAGCAATACTCTAGAAAA+GGG | 0.433854 | 6.4:-22236737 | None:intergenic |
| AGGCAGCAATACTCTAGAAA+AGG | 0.438600 | 6.4:-22236738 | None:intergenic |
| AAATTCTCTTCGAACAAGTC+TGG | 0.445054 | 6.4:-22235600 | None:intergenic |
| TAGAAAAGGGGCAAGGTTGG+AGG | 0.451262 | 6.4:-22236724 | None:intergenic |
| CACGTGAGAGGCGTTCTAAA+AGG | 0.459804 | 6.4:+22235682 | MS.gene09417:CDS |
| CTCTAGAAAAGGGGCAAGGT+TGG | 0.464145 | 6.4:-22236727 | None:intergenic |
| AAGGCTTGGGACTGCATTGA+AGG | 0.464607 | 6.4:+22235701 | MS.gene09417:CDS |
| AGCAGAGGCACTGTACCAAA+AGG | 0.468975 | 6.4:+22234700 | MS.gene09417:CDS |
| AGTTCTGGGAACCCTAAAAC+AGG | 0.477989 | 6.4:+22231349 | MS.gene09417:CDS |
| GAGAGGCGTTCTAAAAGGCT+TGG | 0.483097 | 6.4:+22235687 | MS.gene09417:CDS |
| AGAGGCGTTCTAAAAGGCTT+GGG | 0.492874 | 6.4:+22235688 | MS.gene09417:CDS |
| CATTACTTGATGAGATTGGA+TGG | 0.500191 | 6.4:+22236656 | MS.gene09417:CDS |
| GGAAAATGATGAAGATCGCT+TGG | 0.500822 | 6.4:+22231370 | MS.gene09417:CDS |
| GCAGAGGCACTGTACCAAAA+GGG | 0.515685 | 6.4:+22234701 | MS.gene09417:CDS |
| TCTGTACCTCTTCATCATGA+TGG | 0.517198 | 6.4:-22232024 | None:intergenic |
| GTACCAAAAGGGGCTCGCGC+TGG | 0.533765 | 6.4:+22234712 | MS.gene09417:CDS |
| GTGCCTCTGCTAACTGGTCT+CGG | 0.536496 | 6.4:-22234688 | None:intergenic |
| TAAAATCCATCATGATGAAG+AGG | 0.546731 | 6.4:+22232018 | MS.gene09417:CDS |
| AGAAAAGGGGCAAGGTTGGA+GGG | 0.550629 | 6.4:-22236723 | None:intergenic |
| GAGTATTGACAGGGAAGAGT+TGG | 0.556628 | 6.4:+22232758 | MS.gene09417:CDS |
| ATGTGATTGAGAGTATTGAC+AGG | 0.580901 | 6.4:+22232748 | MS.gene09417:CDS |
| ATGATGAAGATCGCTTGGAG+TGG | 0.598056 | 6.4:+22231375 | MS.gene09417:CDS |
| TTTGGATGCAAAAGAAGATG+TGG | 0.601302 | 6.4:+22235542 | MS.gene09417:CDS |
| TTCTTTACTGACTTTGAGTG+AGG | 0.602209 | 6.4:-22231411 | None:intergenic |
| CAGAGGCACTGTACCAAAAG+GGG | 0.613079 | 6.4:+22234702 | MS.gene09417:CDS |
| GAGAAATCTACAGATGGCGG+CGG | 0.620431 | 6.4:+22235570 | MS.gene09417:CDS |
| TCCAGAAGACGACGATGCAG+AGG | 0.623045 | 6.4:+22232806 | MS.gene09417:CDS |
| GACAGTGAGAAATCTACAGA+TGG | 0.628611 | 6.4:+22235564 | MS.gene09417:CDS |
| ATCTAAATATGGAATCCTCA+CGG | 0.628784 | 6.4:+22235656 | MS.gene09417:CDS |
| TCCTCACGGTAACACGTGAG+AGG | 0.644464 | 6.4:+22235670 | MS.gene09417:CDS |
| TATCCGAGACCAGTTAGCAG+AGG | 0.657582 | 6.4:+22234685 | MS.gene09417:CDS |
| AGTGAGAAATCTACAGATGG+CGG | 0.665608 | 6.4:+22235567 | MS.gene09417:CDS |
| AATACTCTAGAAAAGGGGCA+AGG | 0.672462 | 6.4:-22236731 | None:intergenic |
| GCAGCAATACTCTAGAAAAG+GGG | 0.672956 | 6.4:-22236736 | None:intergenic |
| GCCTCTCACGTGTTACCGTG+AGG | 0.682732 | 6.4:-22235671 | None:intergenic |
| TAACTACATACGAGAGACAG+TGG | 0.683359 | 6.4:+22236686 | MS.gene09417:CDS |
| TGTGATTGAGAGTATTGACA+GGG | 0.762987 | 6.4:+22232749 | MS.gene09417:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATAGTC+AGG | - | chr6.4:22234272-22234291 | None:intergenic | 10.0% |
| !! | CTTTATAATTAAAATAACAT+TGG | - | chr6.4:22235948-22235967 | None:intergenic | 10.0% |
| !! | GTTAAAAAAAAGATATAATA+TGG | - | chr6.4:22232132-22232151 | None:intergenic | 10.0% |
| !! | TTTAGATTAAATAGTTATAA+CGG | + | chr6.4:22234199-22234218 | MS.gene09417:intron | 10.0% |
| !!! | TTTTTTTATCAAATAAAAGT+TGG | + | chr6.4:22235488-22235507 | MS.gene09417:intron | 10.0% |
| !! | AAAAAAAAGATATAATATGG+TGG | - | chr6.4:22232129-22232148 | None:intergenic | 15.0% |
| !! | AACTTTCATTACTTATAATA+TGG | + | chr6.4:22234809-22234828 | MS.gene09417:intron | 15.0% |
| !! | ATAAGATTCATCTAATTAAA+CGG | - | chr6.4:22233559-22233578 | None:intergenic | 15.0% |
| !! | ATAGAAAATATCCTAATAAT+AGG | + | chr6.4:22231649-22231668 | MS.gene09417:intron | 15.0% |
| !! | ATCAATTAAGTTTGTAAATT+TGG | - | chr6.4:22233759-22233778 | None:intergenic | 15.0% |
| !! | CAAGAATTAATTAAAAATCA+TGG | - | chr6.4:22233985-22234004 | None:intergenic | 15.0% |
| !! | CATAAAGAATTTATGTTATA+AGG | - | chr6.4:22233279-22233298 | None:intergenic | 15.0% |
| !! | GTTATAACTATTTAATCTAA+AGG | - | chr6.4:22234200-22234219 | None:intergenic | 15.0% |
| !! | TATATATATATATATGAGTC+AGG | + | chr6.4:22233486-22233505 | MS.gene09417:intron | 15.0% |
| !! | TGAAATTAGATTATGTAAAT+CGG | - | chr6.4:22233055-22233074 | None:intergenic | 15.0% |
| !! | TTATCAGTTATTTATCAATA+TGG | - | chr6.4:22233136-22233155 | None:intergenic | 15.0% |
| !! | TTTGAACTTATAATCATAAA+TGG | - | chr6.4:22236036-22236055 | None:intergenic | 15.0% |
| !!! | AGTTTAATTTACATACAATA+AGG | - | chr6.4:22236232-22236251 | None:intergenic | 15.0% |
| !!! | ATATTTCAAATATCTAAAGT+TGG | - | chr6.4:22234608-22234627 | None:intergenic | 15.0% |
| !! | AAAACAAAAAAGAAATGATC+TGG | - | chr6.4:22231745-22231764 | None:intergenic | 20.0% |
| !! | AAATATCCTAATAATAGGAA+TGG | + | chr6.4:22231654-22231673 | MS.gene09417:intron | 20.0% |
| !! | AAATGTTACCATTATCATAA+TGG | - | chr6.4:22235463-22235482 | None:intergenic | 20.0% |
| !! | AGATCTCAATGTTTATAATT+AGG | + | chr6.4:22233880-22233899 | MS.gene09417:intron | 20.0% |
| !! | ATACACACATATATTTGTAT+TGG | + | chr6.4:22234354-22234373 | MS.gene09417:intron | 20.0% |
| !! | ATTTGAACAAAGCAAATTTA+AGG | - | chr6.4:22231485-22231504 | None:intergenic | 20.0% |
| !! | GATAAATAACTGATAATAGT+AGG | + | chr6.4:22233140-22233159 | MS.gene09417:intron | 20.0% |
| !! | GATAATAGTAGGTTAATTTA+AGG | + | chr6.4:22233151-22233170 | MS.gene09417:intron | 20.0% |
| !! | GTTAATATACACTTTCTAAT+TGG | + | chr6.4:22232944-22232963 | MS.gene09417:intron | 20.0% |
| !! | GTTTAATTAGATGAATCTTA+TGG | + | chr6.4:22233558-22233577 | MS.gene09417:intron | 20.0% |
| !! | TACAAGAATAAAACTGAATT+GGG | + | chr6.4:22234446-22234465 | MS.gene09417:intron | 20.0% |
| !! | TTACAAGAATAAAACTGAAT+TGG | + | chr6.4:22234445-22234464 | MS.gene09417:intron | 20.0% |
| !! | TTACAATTTCATATGAGAAA+GGG | - | chr6.4:22233708-22233727 | None:intergenic | 20.0% |
| !! | TTATTTCAAATATCTAACGT+TGG | - | chr6.4:22234554-22234573 | None:intergenic | 20.0% |
| !! | TTTACAATTTCATATGAGAA+AGG | - | chr6.4:22233709-22233728 | None:intergenic | 20.0% |
| !! | TTTGAACAAAGCAAATTTAA+GGG | - | chr6.4:22231484-22231503 | None:intergenic | 20.0% |
| !!! | AATAGATAACTTTTTTTTGG+TGG | - | chr6.4:22231877-22231896 | None:intergenic | 20.0% |
| !!! | ATTTTTGTAATCTCATCTTA+TGG | + | chr6.4:22232266-22232285 | MS.gene09417:intron | 20.0% |
| !!! | CTTTTTCAAAAGAGTTATAT+TGG | + | chr6.4:22235730-22235749 | MS.gene09417:intron | 20.0% |
| !!! | GAGAATAGATAACTTTTTTT+TGG | - | chr6.4:22231880-22231899 | None:intergenic | 20.0% |
| !!! | GTTAGATATTTGAAATAAGT+TGG | + | chr6.4:22234556-22234575 | MS.gene09417:intron | 20.0% |
| ! | AAAAAAACAAAATAGTGCAC+GGG | - | chr6.4:22232846-22232865 | None:intergenic | 25.0% |
| ! | AAATTGTCTCAACAAATGAT+TGG | - | chr6.4:22235905-22235924 | None:intergenic | 25.0% |
| ! | AACAAGAATTGTGTTAAATG+AGG | + | chr6.4:22234052-22234071 | MS.gene09417:intron | 25.0% |
| ! | AATTATTGAATAAGGAAGTG+AGG | - | chr6.4:22232511-22232530 | None:intergenic | 25.0% |
| ! | ACAACAAATTTATGAAGCAT+AGG | - | chr6.4:22234496-22234515 | None:intergenic | 25.0% |
| ! | ACAAGAATTGTGTTAAATGA+GGG | + | chr6.4:22234053-22234072 | MS.gene09417:intron | 25.0% |
| ! | ACACATATCTATGTAGATTA+AGG | + | chr6.4:22231566-22231585 | MS.gene09417:intron | 25.0% |
| ! | AGATGCAAAAATAAAAGTTC+TGG | + | chr6.4:22231334-22231353 | MS.gene09417:CDS | 25.0% |
| ! | AGCTAAATTGTAACCTTTAT+TGG | + | chr6.4:22232306-22232325 | MS.gene09417:intron | 25.0% |
| ! | ATAAGGATAAATTCATCGAT+GGG | - | chr6.4:22233262-22233281 | None:intergenic | 25.0% |
| ! | ATATAGAAGTAAGTAGCTTA+GGG | + | chr6.4:22235093-22235112 | MS.gene09417:intron | 25.0% |
| ! | ATATTGCAAAAGCTATTGTA+TGG | + | chr6.4:22231507-22231526 | MS.gene09417:intron | 25.0% |
| ! | ATGAAATGTAAAGATTACTG+AGG | - | chr6.4:22232674-22232693 | None:intergenic | 25.0% |
| ! | ATGTGGAAATTCAAAATTGA+TGG | - | chr6.4:22234901-22234920 | None:intergenic | 25.0% |
| ! | ATTGAAATAATGCAAAACTG+AGG | + | chr6.4:22232458-22232477 | MS.gene09417:intron | 25.0% |
| ! | CAAAAAAACAAAATAGTGCA+CGG | - | chr6.4:22232847-22232866 | None:intergenic | 25.0% |
| ! | CAACAAATTTATGAAGCATA+GGG | - | chr6.4:22234495-22234514 | None:intergenic | 25.0% |
| ! | CAAGTAAAAATACACTAGAA+TGG | - | chr6.4:22236481-22236500 | None:intergenic | 25.0% |
| ! | CTGTAAATATATCATAGCTT+AGG | - | chr6.4:22235119-22235138 | None:intergenic | 25.0% |
| ! | GAGATTAAACGATCATTAAA+CGG | - | chr6.4:22234635-22234654 | None:intergenic | 25.0% |
| ! | GATGCAAAAATAAAAGTTCT+GGG | + | chr6.4:22231335-22231354 | MS.gene09417:CDS | 25.0% |
| ! | GATGTAAAGTCATCTAAATA+TGG | + | chr6.4:22235645-22235664 | MS.gene09417:CDS | 25.0% |
| ! | TACAATTTCATATGAGAAAG+GGG | - | chr6.4:22233707-22233726 | None:intergenic | 25.0% |
| ! | TACATTTCATGTATAAACCA+TGG | + | chr6.4:22232684-22232703 | MS.gene09417:intron | 25.0% |
| ! | TAGAAGTTTATTTGATGAAC+AGG | + | chr6.4:22233376-22233395 | MS.gene09417:intron | 25.0% |
| ! | TATAAGGATAAATTCATCGA+TGG | - | chr6.4:22233263-22233282 | None:intergenic | 25.0% |
| ! | TATATAGAAGTAAGTAGCTT+AGG | + | chr6.4:22235092-22235111 | MS.gene09417:intron | 25.0% |
| ! | TATGATGAAAATCATACAGA+AGG | - | chr6.4:22236358-22236377 | None:intergenic | 25.0% |
| ! | TGTGGAAATTCAAAATTGAT+GGG | - | chr6.4:22234900-22234919 | None:intergenic | 25.0% |
| ! | TTTGCTTGTAAAGAAAATGT+CGG | + | chr6.4:22235404-22235423 | MS.gene09417:intron | 25.0% |
| !! | AAAAAACAGCAATTTTGTGA+AGG | - | chr6.4:22236287-22236306 | None:intergenic | 25.0% |
| !! | AAAGATATAATATGGTGGAA+AGG | - | chr6.4:22232124-22232143 | None:intergenic | 25.0% |
| !! | TAATGTTATGACTAGTTAAC+AGG | - | chr6.4:22234973-22234992 | None:intergenic | 25.0% |
| !! | TTCATCATTTTCCTGTTTTA+GGG | - | chr6.4:22231363-22231382 | None:intergenic | 25.0% |
| !!! | AAAGTTGGTAATGATAAAAG+TGG | - | chr6.4:22234593-22234612 | None:intergenic | 25.0% |
| !!! | CTTTTTTGTTTTCTTGAGTA+AGG | - | chr6.4:22232438-22232457 | None:intergenic | 25.0% |
| !!! | TATCCAACAATGGTTTTAAT+AGG | + | chr6.4:22232352-22232371 | MS.gene09417:intron | 25.0% |
| !!! | TTTTAACTCATCAAATGATG+TGG | - | chr6.4:22236140-22236159 | None:intergenic | 25.0% |
| AAAAAACAAAATAGTGCACG+GGG | - | chr6.4:22232845-22232864 | None:intergenic | 30.0% | |
| AAAGAATGATAACACTTCAG+TGG | - | chr6.4:22233633-22233652 | None:intergenic | 30.0% | |
| AAAGATGAAATAAGCAGCAA+AGG | - | chr6.4:22233003-22233022 | None:intergenic | 30.0% | |
| AAGATAGGTAATGTGACATT+GGG | + | chr6.4:22236519-22236538 | MS.gene09417:intron | 30.0% | |
| AATTGGAATCCTTCATGATT+AGG | - | chr6.4:22233420-22233439 | None:intergenic | 30.0% | |
| ACAATTTCATATGAGAAAGG+GGG | - | chr6.4:22233706-22233725 | None:intergenic | 30.0% | |
| AGTCACATCCATTATGATAA+TGG | + | chr6.4:22235452-22235471 | MS.gene09417:intron | 30.0% | |
| ATAACATGATTACATTGTGC+AGG | + | chr6.4:22232707-22232726 | MS.gene09417:intron | 30.0% | |
| ATCTAAATATGGAATCCTCA+CGG | + | chr6.4:22235656-22235675 | MS.gene09417:CDS | 30.0% | |
| CAATGTAATCATGTTATCCA+TGG | - | chr6.4:22232704-22232723 | None:intergenic | 30.0% | |
| CACAGTATTATTTCCAAATG+AGG | - | chr6.4:22234948-22234967 | None:intergenic | 30.0% | |
| CCAACTTTATCTTATGATTC+TGG | + | chr6.4:22235790-22235809 | MS.gene09417:intron | 30.0% | |
| CCAGAATCATAAGATAAAGT+TGG | - | chr6.4:22235793-22235812 | None:intergenic | 30.0% | |
| CTAATAATAGGAATGGAGAT+AGG | + | chr6.4:22231661-22231680 | MS.gene09417:intron | 30.0% | |
| CTAATTAAACGGATGAGATT+TGG | - | chr6.4:22233548-22233567 | None:intergenic | 30.0% | |
| CTATCTCCATTCCTATTATT+AGG | - | chr6.4:22231663-22231682 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr6.4:22231829-22231848 | MS.gene09417:intron | 30.0% | |
| GTGTATATTGTCAAAGGATT+TGG | + | chr6.4:22235524-22235543 | MS.gene09417:intron | 30.0% | |
| GTTCCTATTAAAACCATTGT+TGG | - | chr6.4:22232358-22232377 | None:intergenic | 30.0% | |
| TAAAATCCATCATGATGAAG+AGG | + | chr6.4:22232018-22232037 | MS.gene09417:CDS | 30.0% | |
| TAGTTATAACGGTTCAGATT+TGG | + | chr6.4:22234210-22234229 | MS.gene09417:intron | 30.0% | |
| TATGTAGATTAAGGAACGAT+TGG | + | chr6.4:22231575-22231594 | MS.gene09417:intron | 30.0% | |
| TCCAACAAAAATATAGCATG+TGG | - | chr6.4:22234167-22234186 | None:intergenic | 30.0% | |
| TGAGATCTTGCATCTAATAA+TGG | - | chr6.4:22233868-22233887 | None:intergenic | 30.0% | |
| TGATATGTCTTACTGAACAT+CGG | - | chr6.4:22235987-22236006 | None:intergenic | 30.0% | |
| TTTACCAATACAGTACATGT+GGG | - | chr6.4:22235328-22235347 | None:intergenic | 30.0% | |
| ! | AAGCTTTTCACATATTCATG+TGG | + | chr6.4:22235356-22235375 | MS.gene09417:intron | 30.0% |
| ! | AGTAAAAGCTCTAACCTTTA+AGG | - | chr6.4:22234750-22234769 | None:intergenic | 30.0% |
| ! | ATATAATATGGTGGAAAGGA+AGG | - | chr6.4:22232120-22232139 | None:intergenic | 30.0% |
| ! | ATGCATGATTTTCAACTTCT+TGG | - | chr6.4:22232230-22232249 | None:intergenic | 30.0% |
| ! | CATTTTACTCCTAATCATGA+AGG | + | chr6.4:22233408-22233427 | MS.gene09417:intron | 30.0% |
| ! | CTCTCTGAAAAATTTCGATT+AGG | - | chr6.4:22233225-22233244 | None:intergenic | 30.0% |
| ! | CTGTAAACATTTTACAGTGA+TGG | + | chr6.4:22233321-22233340 | MS.gene09417:intron | 30.0% |
| ! | CTTCATCATTTTCCTGTTTT+AGG | - | chr6.4:22231364-22231383 | None:intergenic | 30.0% |
| ! | GTGAACTTTTTATCCAACAA+TGG | + | chr6.4:22232342-22232361 | MS.gene09417:intron | 30.0% |
| ! | TATAATATGGTGGAAAGGAA+GGG | - | chr6.4:22232119-22232138 | None:intergenic | 30.0% |
| ! | TGGTAATGATAAAAGTGGTT+GGG | - | chr6.4:22234534-22234553 | None:intergenic | 30.0% |
| ! | TGTTTTATATTCACCCATCT+AGG | - | chr6.4:22234863-22234882 | None:intergenic | 30.0% |
| ! | TTTTACCAATACAGTACATG+TGG | - | chr6.4:22235329-22235348 | None:intergenic | 30.0% |
| !! | AACGTTGGTAATGATAAAAG+TGG | - | chr6.4:22234539-22234558 | None:intergenic | 30.0% |
| !! | ACCACATGCTATATTTTTGT+TGG | + | chr6.4:22234163-22234182 | MS.gene09417:intron | 30.0% |
| !! | TTGGTAATGATAAAAGTGGT+TGG | - | chr6.4:22234535-22234554 | None:intergenic | 30.0% |
| !! | TTTTGGAAGGTTTAGTTTCT+AGG | + | chr6.4:22231981-22232000 | MS.gene09417:CDS | 30.0% |
| !!! | AGATAACTTTTTTTTGGTGG+TGG | - | chr6.4:22231874-22231893 | None:intergenic | 30.0% |
| !!! | CAATGGTTTTAATAGGAACT+AGG | + | chr6.4:22232359-22232378 | MS.gene09417:intron | 30.0% |
| !!! | GTTTGGTTTTGCTTGATTAT+AGG | - | chr6.4:22235883-22235902 | None:intergenic | 30.0% |
| AAATTCTCTTCGAACAAGTC+TGG | - | chr6.4:22235603-22235622 | None:intergenic | 35.0% | |
| ACACACAAGCGAATCATAAT+TGG | - | chr6.4:22233437-22233456 | None:intergenic | 35.0% | |
| ACCTACAAATAAGCTTACCA+AGG | - | chr6.4:22235855-22235874 | None:intergenic | 35.0% | |
| ACTATAGATACATTGCCTAG+AGG | + | chr6.4:22235229-22235248 | MS.gene09417:intron | 35.0% | |
| ACTTGTCATACCAATTGATG+TGG | + | chr6.4:22236167-22236186 | MS.gene09417:intron | 35.0% | |
| AGAATAAAACTGAATTGGGC+TGG | + | chr6.4:22234450-22234469 | MS.gene09417:intron | 35.0% | |
| AGAGAATGTACTCCTTGAAT+AGG | + | chr6.4:22231537-22231556 | MS.gene09417:intron | 35.0% | |
| AGCAGAGGTTCATATAAGAT+TGG | - | chr6.4:22236556-22236575 | None:intergenic | 35.0% | |
| AGTAGATCATGCTCCAATAA+AGG | - | chr6.4:22232322-22232341 | None:intergenic | 35.0% | |
| ATCTATGAGCTTAGCTCAAT+TGG | + | chr6.4:22231802-22231821 | MS.gene09417:intron | 35.0% | |
| ATGTGTAACTCTCCTATTCA+AGG | - | chr6.4:22231552-22231571 | None:intergenic | 35.0% | |
| ATGTGTGAGATCTCTGTAAT+CGG | - | chr6.4:22232414-22232433 | None:intergenic | 35.0% | |
| ATTAAGATCCATGTCACTAC+AGG | - | chr6.4:22236414-22236433 | None:intergenic | 35.0% | |
| CAAAGTAACAGATAAACTGC+AGG | - | chr6.4:22236333-22236352 | None:intergenic | 35.0% | |
| CATAAAATATGCAAGGTCTG+GGG | + | chr6.4:22231836-22231855 | MS.gene09417:intron | 35.0% | |
| CATTACTTGATGAGATTGGA+TGG | + | chr6.4:22236656-22236675 | MS.gene09417:CDS | 35.0% | |
| CTATAGATACATTGCCTAGA+GGG | + | chr6.4:22235230-22235249 | MS.gene09417:intron | 35.0% | |
| CTCTCATTACTTGATGAGAT+TGG | + | chr6.4:22236652-22236671 | MS.gene09417:CDS | 35.0% | |
| GAAGATAGGTAATGTGACAT+TGG | + | chr6.4:22236518-22236537 | MS.gene09417:intron | 35.0% | |
| GCATAAAATATGCAAGGTCT+GGG | + | chr6.4:22231835-22231854 | MS.gene09417:intron | 35.0% | |
| GTACAAACACTCAATGAATG+TGG | - | chr6.4:22234918-22234937 | None:intergenic | 35.0% | |
| GTTGTATACAGTAATCACAC+AGG | - | chr6.4:22236392-22236411 | None:intergenic | 35.0% | |
| TAAAGATTACTGAGGTAGCA+AGG | - | chr6.4:22232666-22232685 | None:intergenic | 35.0% | |
| TAATACGTGAAAAATGCACG+AGG | - | chr6.4:22232563-22232582 | None:intergenic | 35.0% | |
| TAATCTCACTGCAGAATAAC+AGG | + | chr6.4:22234648-22234667 | MS.gene09417:intron | 35.0% | |
| TAGCTCATAGAGTTTCTTCT+TGG | - | chr6.4:22236629-22236648 | None:intergenic | 35.0% | |
| TCCTTGGTAAGCTTATTTGT+AGG | + | chr6.4:22235851-22235870 | MS.gene09417:intron | 35.0% | |
| TGAACACCTTGAATGCTATA+TGG | + | chr6.4:22232153-22232172 | MS.gene09417:intron | 35.0% | |
| TGACATGGATCTTAATATCC+AGG | + | chr6.4:22236418-22236437 | MS.gene09417:intron | 35.0% | |
| TGATGTATTGCCACATCAAT+TGG | - | chr6.4:22236180-22236199 | None:intergenic | 35.0% | |
| TGCATAAAATATGCAAGGTC+TGG | + | chr6.4:22231834-22231853 | MS.gene09417:intron | 35.0% | |
| TGCTAACAACAAACACACTA+TGG | + | chr6.4:22233675-22233694 | MS.gene09417:intron | 35.0% | |
| TTGTACGATAAGTCCTCATT+TGG | + | chr6.4:22234932-22234951 | MS.gene09417:intron | 35.0% | |
| TTTGGATGCAAAAGAAGATG+TGG | + | chr6.4:22235542-22235561 | MS.gene09417:CDS | 35.0% | |
| ! | CTGCAGTTTATCTGTTACTT+TGG | + | chr6.4:22236331-22236350 | MS.gene09417:intron | 35.0% |
| ! | CTTCTTGGTAATAGAAAAGC+AGG | - | chr6.4:22232215-22232234 | None:intergenic | 35.0% |
| ! | GATGATGATGATGAGAAGAT+AGG | + | chr6.4:22236504-22236523 | MS.gene09417:intron | 35.0% |
| ! | GCAAGCAATGAAGTGTATTT+TGG | - | chr6.4:22231956-22231975 | None:intergenic | 35.0% |
| ! | GTATAGCTTTTCTACACTGA+CGG | - | chr6.4:22236095-22236114 | None:intergenic | 35.0% |
| ! | GTCTCAACAAATGATTGGTT+TGG | - | chr6.4:22235900-22235919 | None:intergenic | 35.0% |
| ! | TAATGGATGTGACTCATTTG+AGG | - | chr6.4:22235446-22235465 | None:intergenic | 35.0% |
| ! | TTCATTGCTTGCGAAGATTT+TGG | + | chr6.4:22231964-22231983 | MS.gene09417:CDS | 35.0% |
| !! | ATGTGATTGAGAGTATTGAC+AGG | + | chr6.4:22232748-22232767 | MS.gene09417:CDS | 35.0% |
| !! | GACTTGGTGTATATTGTCAA+AGG | + | chr6.4:22235518-22235537 | MS.gene09417:intron | 35.0% |
| !! | TGTGATTGAGAGTATTGACA+GGG | + | chr6.4:22232749-22232768 | MS.gene09417:CDS | 35.0% |
| !! | TTCTTTACTGACTTTGAGTG+AGG | - | chr6.4:22231414-22231433 | None:intergenic | 35.0% |
| !!! | AAAGTCTTTTGACTTACACC+TGG | + | chr6.4:22234235-22234254 | MS.gene09417:intron | 35.0% |
| !!! | AGTGGTTGTGATAGCTTTTT+TGG | - | chr6.4:22234521-22234540 | None:intergenic | 35.0% |
| !!! | TAAGTCTTTTGACTTACACC+TGG | - | chr6.4:22233523-22233542 | None:intergenic | 35.0% |
| !!! | TCATGATTTTTAGCTTGTCC+TGG | - | chr6.4:22236439-22236458 | None:intergenic | 35.0% |
| AAAAATGCACGAGGAAAGGA+TGG | - | chr6.4:22232554-22232573 | None:intergenic | 40.0% | |
| AAAAGTTGGCAGACTTGACT+TGG | + | chr6.4:22235502-22235521 | MS.gene09417:intron | 40.0% | |
| AAATTCATCGATGGGTCCAT+GGG | - | chr6.4:22233254-22233273 | None:intergenic | 40.0% | |
| ACAAGTCTATGTTACTCAGG+TGG | - | chr6.4:22235819-22235838 | None:intergenic | 40.0% | |
| ACACTTTCTAATTGGCCCAT+CGG | + | chr6.4:22232952-22232971 | MS.gene09417:intron | 40.0% | |
| ACAGAGAAGTGACAGAAGAA+AGG | - | chr6.4:22232091-22232110 | None:intergenic | 40.0% | |
| AGATAGAAACCTAGCCTAGA+TGG | + | chr6.4:22234846-22234865 | MS.gene09417:intron | 40.0% | |
| AGTGAGAAATCTACAGATGG+CGG | + | chr6.4:22235567-22235586 | MS.gene09417:CDS | 40.0% | |
| ATAATGGCAGCAGATGATAG+TGG | - | chr6.4:22233852-22233871 | None:intergenic | 40.0% | |
| ATGTTAGCAGCAACACTTAC+AGG | - | chr6.4:22233656-22233675 | None:intergenic | 40.0% | |
| ATGTTGCAGGTTTGCGTTAT+GGG | - | chr6.4:22232589-22232608 | None:intergenic | 40.0% | |
| CACCTTGAATGCTATATGGT+TGG | + | chr6.4:22232157-22232176 | MS.gene09417:intron | 40.0% | |
| CCTACAAGTCTATGTTACTC+AGG | - | chr6.4:22235822-22235841 | None:intergenic | 40.0% | |
| CCTGAGTAACATAGACTTGT+AGG | + | chr6.4:22235819-22235838 | MS.gene09417:intron | 40.0% | |
| GACAGTGAGAAATCTACAGA+TGG | + | chr6.4:22235564-22235583 | MS.gene09417:CDS | 40.0% | |
| GACCAACCATATAGCATTCA+AGG | - | chr6.4:22232162-22232181 | None:intergenic | 40.0% | |
| GATAGAAACCTAGCCTAGAT+GGG | + | chr6.4:22234847-22234866 | MS.gene09417:intron | 40.0% | |
| GATATAAGAGAGAAGCCGAT+GGG | - | chr6.4:22232970-22232989 | None:intergenic | 40.0% | |
| GCAACTCACTCACAAAGAAT+TGG | - | chr6.4:22233918-22233937 | None:intergenic | 40.0% | |
| GCTTGTAAAGAAAATGTCGG+AGG | + | chr6.4:22235407-22235426 | MS.gene09417:intron | 40.0% | |
| GGAAAATGATGAAGATCGCT+TGG | + | chr6.4:22231370-22231389 | MS.gene09417:CDS | 40.0% | |
| GGAGAAACAGATGAAGACAA+AGG | - | chr6.4:22231463-22231482 | None:intergenic | 40.0% | |
| GGCAGAGATTGAATCCTTAA+AGG | + | chr6.4:22234733-22234752 | MS.gene09417:CDS | 40.0% | |
| GGTCAACATTAAGAGAAAGC+AGG | - | chr6.4:22234146-22234165 | None:intergenic | 40.0% | |
| GTATACAACCTGTAGTGACA+TGG | + | chr6.4:22236403-22236422 | MS.gene09417:intron | 40.0% | |
| TAAATTCATCGATGGGTCCA+TGG | - | chr6.4:22233255-22233274 | None:intergenic | 40.0% | |
| TAACAGATAAACTGCAGGCA+GGG | - | chr6.4:22236328-22236347 | None:intergenic | 40.0% | |
| TAACTACATACGAGAGACAG+TGG | + | chr6.4:22236686-22236705 | MS.gene09417:CDS | 40.0% | |
| TAGGAAACTAAGCAAGTCAC+TGG | + | chr6.4:22235263-22235282 | MS.gene09417:intron | 40.0% | |
| TAGGTAATGTGACATTGGGT+AGG | + | chr6.4:22236523-22236542 | MS.gene09417:intron | 40.0% | |
| TATATTCACCCATCTAGGCT+AGG | - | chr6.4:22234858-22234877 | None:intergenic | 40.0% | |
| TCATAGAGTTTCTTCTTGGC+AGG | - | chr6.4:22236625-22236644 | None:intergenic | 40.0% | |
| TCCTATGCATTCTGCAATAC+CGG | + | chr6.4:22233810-22233829 | MS.gene09417:intron | 40.0% | |
| TCTGTACCTCTTCATCATGA+TGG | - | chr6.4:22232027-22232046 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCAATTGGTA+AGG | + | chr6.4:22231807-22231826 | MS.gene09417:intron | 40.0% | |
| TGATATAAGAGAGAAGCCGA+TGG | - | chr6.4:22232971-22232990 | None:intergenic | 40.0% | |
| TGTGTGAGATCTCTGTAATC+GGG | - | chr6.4:22232413-22232432 | None:intergenic | 40.0% | |
| TTGTAGGTTTCTTTGCTCCT+TGG | + | chr6.4:22235835-22235854 | MS.gene09417:intron | 40.0% | |
| TTTCAGAGAGTTAGTTCCCA+TGG | + | chr6.4:22233235-22233254 | MS.gene09417:intron | 40.0% | |
| ! | GAGTTATATTGGTTGCTGCT+TGG | + | chr6.4:22235741-22235760 | MS.gene09417:intron | 40.0% |
| ! | GTATTTTTCCGATTGCTCCA+TGG | - | chr6.4:22234110-22234129 | None:intergenic | 40.0% |
| ! | TTGCTTGCGAAGATTTTGGA+AGG | + | chr6.4:22231968-22231987 | MS.gene09417:CDS | 40.0% |
| !! | AGTGACTTGCTTAGTTTCCT+AGG | - | chr6.4:22235264-22235283 | None:intergenic | 40.0% |
| !! | TCAGAGAGTACCTGAATCAA+AGG | - | chr6.4:22236580-22236599 | None:intergenic | 40.0% |
| !!! | AACTTTTTTTTGGTGGTGGC+CGG | - | chr6.4:22231870-22231889 | None:intergenic | 40.0% |
| AACAGATAAACTGCAGGCAG+GGG | - | chr6.4:22236327-22236346 | None:intergenic | 45.0% | |
| AAGTGACAGAAGAAAGGTGG+TGG | - | chr6.4:22232085-22232104 | None:intergenic | 45.0% | |
| AATAAGGAAGTGAGGCCTTG+AGG | - | chr6.4:22232503-22232522 | None:intergenic | 45.0% | |
| ACCGGTATTGCAGAATGCAT+AGG | - | chr6.4:22233814-22233833 | None:intergenic | 45.0% | |
| ACCTCTGCTTCCTTTGATTC+AGG | + | chr6.4:22236567-22236586 | MS.gene09417:intron | 45.0% | |
| ACCTGAATCAAAGGAAGCAG+AGG | - | chr6.4:22236571-22236590 | None:intergenic | 45.0% | |
| AGAAGGAACCATGGAGCAAT+CGG | + | chr6.4:22234099-22234118 | MS.gene09417:intron | 45.0% | |
| AGGTAGCAAGGATGAGCTAA+AGG | - | chr6.4:22232654-22232673 | None:intergenic | 45.0% | |
| AGTGACAGAAGAAAGGTGGT+GGG | - | chr6.4:22232084-22232103 | None:intergenic | 45.0% | |
| ATGATGAAGATCGCTTGGAG+TGG | + | chr6.4:22231375-22231394 | MS.gene09417:CDS | 45.0% | |
| ATGATGTGGCATCACGTCAT+TGG | - | chr6.4:22236126-22236145 | None:intergenic | 45.0% | |
| CAGAATGCATAGGAGAAGCT+AGG | - | chr6.4:22233804-22233823 | None:intergenic | 45.0% | |
| CATGTTGCAGGTTTGCGTTA+TGG | - | chr6.4:22232590-22232609 | None:intergenic | 45.0% | |
| CCTAGAGGGTAACATTTCCT+AGG | + | chr6.4:22235244-22235263 | MS.gene09417:intron | 45.0% | |
| CCTAGGAAATGTTACCCTCT+AGG | - | chr6.4:22235247-22235266 | None:intergenic | 45.0% | |
| CGTGAAAAATGCACGAGGAA+AGG | - | chr6.4:22232558-22232577 | None:intergenic | 45.0% | |
| CGTGTGTCTGAATAGCACAA+CGG | + | chr6.4:22235060-22235079 | MS.gene09417:intron | 45.0% | |
| GACAAATTGAGAGACGACAC+CGG | + | chr6.4:22234075-22234094 | MS.gene09417:intron | 45.0% | |
| GAGAAGTGACAGAAGAAAGG+TGG | - | chr6.4:22232088-22232107 | None:intergenic | 45.0% | |
| GGATGTGACTCATTTGAGGA+GGG | - | chr6.4:22235442-22235461 | None:intergenic | 45.0% | |
| GTAACAGATAAACTGCAGGC+AGG | - | chr6.4:22236329-22236348 | None:intergenic | 45.0% | |
| GTGTGAGATCTCTGTAATCG+GGG | - | chr6.4:22232412-22232431 | None:intergenic | 45.0% | |
| GTTGCCCACATGTACTGTAT+TGG | + | chr6.4:22235321-22235340 | MS.gene09417:intron | 45.0% | |
| TATGAAGCATAGGGAACCTC+TGG | - | chr6.4:22234486-22234505 | None:intergenic | 45.0% | |
| TGGATGTGACTCATTTGAGG+AGG | - | chr6.4:22235443-22235462 | None:intergenic | 45.0% | |
| ! | AATGCTATATGGTTGGTCCC+TGG | + | chr6.4:22232164-22232183 | MS.gene09417:intron | 45.0% |
| ! | CGTTGTGCTATTCAGACACA+CGG | - | chr6.4:22235062-22235081 | None:intergenic | 45.0% |
| ! | TGACTTACACCTGGTGTCAA+CGG | + | chr6.4:22234244-22234263 | MS.gene09417:intron | 45.0% |
| ! | TGACTTACACCTGGTGTCAA+CGG | - | chr6.4:22234263-22234244 | None:intergenic | 45.0% |
| !! | AGAGGCGTTCTAAAAGGCTT+GGG | + | chr6.4:22235688-22235707 | MS.gene09417:CDS | 45.0% |
| !! | AGTTCTGGGAACCCTAAAAC+AGG | + | chr6.4:22231349-22231368 | MS.gene09417:CDS | 45.0% |
| !! | GAGTATTGACAGGGAAGAGT+TGG | + | chr6.4:22232758-22232777 | MS.gene09417:CDS | 45.0% |
| !! | TGGTGCTGCTTCATCAAAAC+CGG | - | chr6.4:22233832-22233851 | None:intergenic | 45.0% |
| !!! | ACTTTTTTTTGGTGGTGGCC+GGG | - | chr6.4:22231869-22231888 | None:intergenic | 45.0% |
| !!! | AAATTTAAAATTATTGAATA+AGG | - | chr6.4:22232519-22232538 | None:intergenic | 5.0% |
| AAGGCTTGGGACTGCATTGA+AGG | + | chr6.4:22235701-22235720 | MS.gene09417:CDS | 50.0% | |
| AGAAAAGGGGCAAGGTTGGA+GGG | - | chr6.4:22236726-22236745 | None:intergenic | 50.0% | |
| CAAATTCCTTTGCCGCCTCA+AGG | + | chr6.4:22232485-22232504 | MS.gene09417:intron | 50.0% | |
| TAGAAAAGGGGCAAGGTTGG+AGG | - | chr6.4:22236727-22236746 | None:intergenic | 50.0% | |
| TATCCGAGACCAGTTAGCAG+AGG | + | chr6.4:22234685-22234704 | MS.gene09417:CDS | 50.0% | |
| TGCTCCATGGTTCCTTCTAC+CGG | - | chr6.4:22234097-22234116 | None:intergenic | 50.0% | |
| ! | GAGAAATCTACAGATGGCGG+CGG | + | chr6.4:22235570-22235589 | MS.gene09417:CDS | 50.0% |
| ! | TCCAACCTTGCCCCTTTTCT+AGG | + | chr6.4:22236726-22236745 | MS.gene09417:CDS | 50.0% |
| !! | AGCAGAGGCACTGTACCAAA+AGG | + | chr6.4:22234700-22234719 | MS.gene09417:CDS | 50.0% |
| !! | CACGTGAGAGGCGTTCTAAA+AGG | + | chr6.4:22235682-22235701 | MS.gene09417:CDS | 50.0% |
| !! | CAGAGGCACTGTACCAAAAG+GGG | + | chr6.4:22234702-22234721 | MS.gene09417:CDS | 50.0% |
| !! | GAGAGGCGTTCTAAAAGGCT+TGG | + | chr6.4:22235687-22235706 | MS.gene09417:CDS | 50.0% |
| !! | GCAGAGGCACTGTACCAAAA+GGG | + | chr6.4:22234701-22234720 | MS.gene09417:CDS | 50.0% |
| !! | GGCTGGTTTCTAAGATCCAG+AGG | + | chr6.4:22234467-22234486 | MS.gene09417:intron | 50.0% |
| !!! | AGTTCTGGGGGCTCTACTTT+TGG | + | chr6.4:22232187-22232206 | MS.gene09417:intron | 50.0% |
| !!! | CTTTTTTTTGGTGGTGGCCG+GGG | - | chr6.4:22231868-22231887 | None:intergenic | 50.0% |
| AAGGAAGTGAGGCCTTGAGG+CGG | - | chr6.4:22232500-22232519 | None:intergenic | 55.0% | |
| AATGACCCTGCGCATGTTGC+AGG | - | chr6.4:22232602-22232621 | None:intergenic | 55.0% | |
| ACCTCTGCATCGTCGTCTTC+TGG | - | chr6.4:22232810-22232829 | None:intergenic | 55.0% | |
| AGTCAGGATCCGTTGACACC+AGG | + | chr6.4:22233502-22233521 | MS.gene09417:intron | 55.0% | |
| AGTCAGGATCCGTTGACACC+AGG | - | chr6.4:22233521-22233502 | None:intergenic | 55.0% | |
| GACACCGGTAGAAGGAACCA+TGG | + | chr6.4:22234090-22234109 | MS.gene09417:intron | 55.0% | |
| GCAAACCTGCAACATGCGCA+GGG | + | chr6.4:22232594-22232613 | MS.gene09417:intron | 55.0% | |
| GGTACAGTGCCTCTGCTAAC+TGG | - | chr6.4:22234697-22234716 | None:intergenic | 55.0% | |
| TCCAGAAGACGACGATGCAG+AGG | + | chr6.4:22232806-22232825 | MS.gene09417:CDS | 55.0% | |
| TCCTCACGGTAACACGTGAG+AGG | + | chr6.4:22235670-22235689 | MS.gene09417:CDS | 55.0% | |
| TGAGAGACGACACCGGTAGA+AGG | + | chr6.4:22234082-22234101 | MS.gene09417:intron | 55.0% | |
| TGCACGAGGAAAGGATGGAG+AGG | - | chr6.4:22232549-22232568 | None:intergenic | 55.0% | |
| ! | AAGGTCTGGGGTTCAAACCC+CGG | + | chr6.4:22231848-22231867 | MS.gene09417:intron | 55.0% |
| ! | ATGGTTGGTCCCTGGAGTTC+TGG | + | chr6.4:22232172-22232191 | MS.gene09417:intron | 55.0% |
| ! | GTGCCTCTGCTAACTGGTCT+CGG | - | chr6.4:22234691-22234710 | None:intergenic | 55.0% |
| ! | TGGTTGGTCCCTGGAGTTCT+GGG | + | chr6.4:22232173-22232192 | MS.gene09417:intron | 55.0% |
| !! | AAACTGCAGGCAGGGGTGTT+TGG | - | chr6.4:22236320-22236339 | None:intergenic | 55.0% |
| AGTAGAGCCCCCAGAACTCC+AGG | - | chr6.4:22232185-22232204 | None:intergenic | 60.0% | |
| CGCAAACCTGCAACATGCGC+AGG | + | chr6.4:22232593-22232612 | MS.gene09417:intron | 60.0% | |
| GCCTCTCACGTGTTACCGTG+AGG | - | chr6.4:22235674-22235693 | None:intergenic | 60.0% | |
| GTAGAGCCCCCAGAACTCCA+GGG | - | chr6.4:22232184-22232203 | None:intergenic | 60.0% | |
| ! | GGTTGGTCCCTGGAGTTCTG+GGG | + | chr6.4:22232174-22232193 | MS.gene09417:intron | 60.0% |
| ! | GTTGGTCCCTGGAGTTCTGG+GGG | + | chr6.4:22232175-22232194 | MS.gene09417:intron | 60.0% |
| GTACCAAAAGGGGCTCGCGC+TGG | + | chr6.4:22234712-22234731 | MS.gene09417:CDS | 65.0% | |
| GTGAGGCCTTGAGGCGGCAA+AGG | - | chr6.4:22232494-22232513 | None:intergenic | 65.0% | |
| ! | CTGCCAGCGCGAGCCCCTTT+TGG | - | chr6.4:22234718-22234737 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 22231329 | 22236747 | 22231329 | ID=MS.gene09417 |
| chr6.4 | mRNA | 22231329 | 22236747 | 22231329 | ID=MS.gene09417.t1;Parent=MS.gene09417 |
| chr6.4 | exon | 22231329 | 22231421 | 22231329 | ID=MS.gene09417.t1.exon1;Parent=MS.gene09417.t1 |
| chr6.4 | CDS | 22231329 | 22231421 | 22231329 | ID=cds.MS.gene09417.t1;Parent=MS.gene09417.t1 |
| chr6.4 | exon | 22231944 | 22232039 | 22231944 | ID=MS.gene09417.t1.exon2;Parent=MS.gene09417.t1 |
| chr6.4 | CDS | 22231944 | 22232039 | 22231944 | ID=cds.MS.gene09417.t1;Parent=MS.gene09417.t1 |
| chr6.4 | exon | 22232729 | 22232827 | 22232729 | ID=MS.gene09417.t1.exon3;Parent=MS.gene09417.t1 |
| chr6.4 | CDS | 22232729 | 22232827 | 22232729 | ID=cds.MS.gene09417.t1;Parent=MS.gene09417.t1 |
| chr6.4 | exon | 22234662 | 22234754 | 22234662 | ID=MS.gene09417.t1.exon4;Parent=MS.gene09417.t1 |
| chr6.4 | CDS | 22234662 | 22234754 | 22234662 | ID=cds.MS.gene09417.t1;Parent=MS.gene09417.t1 |
| chr6.4 | exon | 22235540 | 22235722 | 22235540 | ID=MS.gene09417.t1.exon5;Parent=MS.gene09417.t1 |
| chr6.4 | CDS | 22235540 | 22235722 | 22235540 | ID=cds.MS.gene09417.t1;Parent=MS.gene09417.t1 |
| chr6.4 | exon | 22236589 | 22236747 | 22236589 | ID=MS.gene09417.t1.exon6;Parent=MS.gene09417.t1 |
| chr6.4 | CDS | 22236589 | 22236747 | 22236589 | ID=cds.MS.gene09417.t1;Parent=MS.gene09417.t1 |
| Gene Sequence |
| Protein sequence |
