Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90651.t1 | AES82241.1 | 59 | 354 | 103 | 3 | 47 | 359 | 172 | 524 | 5.60E-106 | 394.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90651.t1 | G7KTR1 | 59.0 | 354 | 103 | 3 | 47 | 359 | 172 | 524 | 4.0e-106 | 394.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene90651 | 0.840123 | 1.05E-57 | -1.69E-46 |
| MS.gene049711 | MS.gene90651 | 0.802881 | 4.54E-49 | -1.69E-46 |
| MS.gene049977 | MS.gene90651 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene90651 | 0.814456 | 1.53E-51 | -1.69E-46 |
| MS.gene050031 | MS.gene90651 | 0.828844 | 7.17E-55 | -1.69E-46 |
| MS.gene050043 | MS.gene90651 | 0.817239 | 3.66E-52 | -1.69E-46 |
| MS.gene051181 | MS.gene90651 | 0.814714 | 1.34E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene90651 | 0.811192 | 7.91E-51 | -1.69E-46 |
| MS.gene051613 | MS.gene90651 | 0.811955 | 5.40E-51 | -1.69E-46 |
| MS.gene051832 | MS.gene90651 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene052447 | MS.gene90651 | 0.823958 | 1.05E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene90651 | 0.816659 | 4.93E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene90651 | 0.815706 | 8.06E-52 | -1.69E-46 |
| MS.gene052586 | MS.gene90651 | 0.802672 | 5.02E-49 | -1.69E-46 |
| MS.gene052685 | MS.gene90651 | 0.831645 | 1.48E-55 | -1.69E-46 |
| MS.gene05329 | MS.gene90651 | 0.833688 | 4.62E-56 | -1.69E-46 |
| MS.gene05365 | MS.gene90651 | 0.818467 | 1.93E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene90651 | 0.828055 | 1.11E-54 | -1.69E-46 |
| MS.gene054222 | MS.gene90651 | 0.821996 | 3.00E-53 | -1.69E-46 |
| MS.gene05422 | MS.gene90651 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene90651 | 0.82805 | 1.11E-54 | -1.69E-46 |
| MS.gene054576 | MS.gene90651 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene90651 | 0.822768 | 1.99E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene90651 | 0.820389 | 7.04E-53 | -1.69E-46 |
| MS.gene055778 | MS.gene90651 | 0.806694 | 7.26E-50 | -1.69E-46 |
| MS.gene055840 | MS.gene90651 | 0.806698 | 7.25E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene90651 | 0.817706 | 2.87E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene90651 | 0.815747 | 7.89E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene90651 | 0.803357 | 3.62E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene90651 | 0.817883 | 2.62E-52 | -1.69E-46 |
| MS.gene05690 | MS.gene90651 | 0.803066 | 4.16E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene90651 | 0.807171 | 5.76E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene90651 | 0.805594 | 1.24E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene90651 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene90651 | 0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene90651 | 0.806878 | 6.64E-50 | -1.69E-46 |
| MS.gene059272 | MS.gene90651 | 0.82488 | 6.35E-54 | -1.69E-46 |
| MS.gene059458 | MS.gene90651 | 0.813811 | 2.12E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene90651 | 0.818782 | 1.64E-52 | -1.69E-46 |
| MS.gene059460 | MS.gene90651 | 0.81584 | 7.52E-52 | -1.69E-46 |
| MS.gene059584 | MS.gene90651 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene90651 | 0.810271 | 1.25E-50 | -1.69E-46 |
| MS.gene060012 | MS.gene90651 | 0.807785 | 4.27E-50 | -1.69E-46 |
| MS.gene060521 | MS.gene90651 | 0.819098 | 1.39E-52 | -1.69E-46 |
| MS.gene060879 | MS.gene90651 | 0.806409 | 8.34E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90651.t1 | MTR_7g110100 | 59.040 | 354 | 103 | 3 | 47 | 359 | 172 | 524 | 1.96e-138 | 404 |
| MS.gene90651.t1 | MTR_8g064300 | 83.333 | 192 | 14 | 1 | 188 | 361 | 120 | 311 | 7.69e-108 | 318 |
| MS.gene90651.t1 | MTR_5g093790 | 84.127 | 189 | 12 | 1 | 191 | 361 | 197 | 385 | 3.54e-105 | 314 |
| MS.gene90651.t1 | MTR_3g452170 | 47.321 | 336 | 98 | 4 | 47 | 359 | 172 | 451 | 5.00e-93 | 285 |
| MS.gene90651.t1 | MTR_4g032565 | 58.103 | 253 | 72 | 3 | 141 | 359 | 32 | 284 | 6.73e-91 | 274 |
| MS.gene90651.t1 | MTR_4g032585 | 57.708 | 253 | 73 | 3 | 141 | 359 | 32 | 284 | 4.36e-90 | 272 |
| MS.gene90651.t1 | MTR_1g105785 | 42.784 | 388 | 170 | 8 | 17 | 359 | 146 | 526 | 4.67e-90 | 281 |
| MS.gene90651.t1 | MTR_7g051400 | 38.919 | 370 | 164 | 6 | 28 | 355 | 151 | 500 | 2.12e-74 | 240 |
| MS.gene90651.t1 | MTR_1g492690 | 35.093 | 322 | 162 | 8 | 62 | 348 | 1 | 310 | 3.73e-48 | 167 |
| MS.gene90651.t1 | MTR_0048s0080 | 30.220 | 364 | 187 | 11 | 22 | 358 | 15 | 338 | 5.37e-48 | 166 |
| MS.gene90651.t1 | MTR_3g108500 | 47.191 | 178 | 50 | 8 | 190 | 332 | 20 | 188 | 2.20e-31 | 119 |
| MS.gene90651.t1 | MTR_8g104590 | 31.416 | 226 | 89 | 6 | 140 | 358 | 20 | 186 | 3.40e-27 | 106 |
| MS.gene90651.t1 | MTR_4g060433 | 32.093 | 215 | 100 | 4 | 144 | 358 | 35 | 203 | 1.13e-24 | 100 |
| MS.gene90651.t1 | MTR_1g052715 | 47.826 | 92 | 47 | 1 | 47 | 138 | 132 | 222 | 1.14e-22 | 97.4 |
| MS.gene90651.t1 | MTR_3g046650 | 38.150 | 173 | 66 | 6 | 117 | 266 | 77 | 231 | 9.85e-22 | 93.2 |
| MS.gene90651.t1 | MTR_1g115520 | 35.811 | 148 | 51 | 3 | 144 | 277 | 9 | 126 | 3.63e-20 | 86.3 |
| MS.gene90651.t1 | MTR_5g057125 | 25.316 | 316 | 171 | 9 | 83 | 358 | 5 | 295 | 4.86e-20 | 89.7 |
| MS.gene90651.t1 | MTR_6g024030 | 37.634 | 93 | 56 | 1 | 23 | 115 | 70 | 160 | 4.98e-17 | 79.7 |
| MS.gene90651.t1 | MTR_2g010270 | 37.500 | 112 | 67 | 2 | 23 | 134 | 140 | 248 | 1.42e-16 | 79.7 |
| MS.gene90651.t1 | MTR_6g445520 | 23.235 | 340 | 191 | 14 | 45 | 322 | 29 | 360 | 1.47e-16 | 80.9 |
| MS.gene90651.t1 | MTR_7g074180 | 36.607 | 112 | 68 | 2 | 23 | 134 | 150 | 258 | 3.88e-16 | 79.0 |
| MS.gene90651.t1 | MTR_8g446640 | 37.383 | 107 | 63 | 2 | 28 | 134 | 137 | 239 | 1.26e-15 | 77.0 |
| MS.gene90651.t1 | MTR_5g030110 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.89e-15 | 76.6 |
| MS.gene90651.t1 | MTR_2g007410 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.89e-15 | 76.6 |
| MS.gene90651.t1 | MTR_7g024060 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.94e-15 | 76.6 |
| MS.gene90651.t1 | MTR_6g087820 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.94e-15 | 76.6 |
| MS.gene90651.t1 | MTR_5g081190 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.94e-15 | 76.6 |
| MS.gene90651.t1 | MTR_5g091480 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.94e-15 | 76.6 |
| MS.gene90651.t1 | MTR_5g056290 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.94e-15 | 76.6 |
| MS.gene90651.t1 | MTR_3g031190 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.94e-15 | 76.6 |
| MS.gene90651.t1 | MTR_2g005490 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.94e-15 | 76.6 |
| MS.gene90651.t1 | MTR_2g010570 | 37.383 | 107 | 63 | 2 | 28 | 134 | 156 | 258 | 1.94e-15 | 76.6 |
| MS.gene90651.t1 | MTR_1g011490 | 36.607 | 112 | 68 | 2 | 23 | 134 | 141 | 249 | 3.53e-15 | 75.9 |
| MS.gene90651.t1 | MTR_4g058660 | 41.860 | 86 | 49 | 1 | 49 | 134 | 174 | 258 | 6.67e-15 | 75.1 |
| MS.gene90651.t1 | MTR_2g019040 | 42.683 | 82 | 47 | 0 | 49 | 130 | 26 | 107 | 7.00e-15 | 73.9 |
| MS.gene90651.t1 | MTR_7g451880 | 34.821 | 112 | 70 | 2 | 23 | 134 | 151 | 259 | 1.18e-14 | 74.3 |
| MS.gene90651.t1 | MTR_3g055660 | 25.000 | 208 | 125 | 7 | 47 | 224 | 195 | 401 | 3.69e-14 | 73.9 |
| MS.gene90651.t1 | MTR_4g014890 | 25.000 | 208 | 125 | 7 | 47 | 224 | 195 | 401 | 4.05e-14 | 73.9 |
| MS.gene90651.t1 | MTR_2g040680 | 38.931 | 131 | 57 | 5 | 230 | 358 | 133 | 242 | 5.37e-14 | 71.2 |
| MS.gene90651.t1 | MTR_3g015660 | 36.842 | 95 | 58 | 1 | 23 | 117 | 150 | 242 | 7.48e-14 | 70.9 |
| MS.gene90651.t1 | MTR_1g023370 | 38.889 | 90 | 52 | 1 | 28 | 117 | 156 | 242 | 7.55e-14 | 71.6 |
| MS.gene90651.t1 | MTR_1g082860 | 40.698 | 86 | 49 | 1 | 23 | 108 | 141 | 224 | 1.16e-13 | 70.9 |
| MS.gene90651.t1 | MTR_0105s0080 | 39.326 | 89 | 52 | 1 | 23 | 111 | 106 | 192 | 3.78e-13 | 68.9 |
| MS.gene90651.t1 | MTR_6g059860 | 24.519 | 208 | 126 | 6 | 47 | 224 | 189 | 395 | 9.11e-13 | 69.7 |
| MS.gene90651.t1 | MTR_2g048550 | 26.446 | 242 | 151 | 8 | 45 | 262 | 170 | 408 | 1.37e-12 | 68.9 |
| MS.gene90651.t1 | MTR_5g078250 | 21.094 | 256 | 160 | 5 | 49 | 264 | 174 | 427 | 2.42e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90651.t1 | AT1G52950 | 23.502 | 217 | 131 | 7 | 49 | 232 | 173 | 387 | 3.63e-13 | 70.9 |
Find 84 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACACAATTGGCAAAATTA+TGG | 0.241484 | 2.3:+12892015 | MS.gene90651:CDS |
| CACCAGATCATTCCTAGTTT+TGG | 0.254151 | 2.3:-12892383 | None:intergenic |
| TCAAGCATCTGGAACCTTAA+TGG | 0.259449 | 2.3:+12891269 | MS.gene90651:CDS |
| TGAGATCACTGATTGGAATT+TGG | 0.259990 | 2.3:+12891993 | MS.gene90651:CDS |
| GATCAGCTTGGTGCCATAAA+AGG | 0.288555 | 2.3:-12891073 | None:intergenic |
| GTTCCGGTGGCGGCACTCTC+TGG | 0.297611 | 2.3:-12889993 | None:intergenic |
| TATCGAGAAACATAATATTA+AGG | 0.307695 | 2.3:+12892080 | MS.gene90651:CDS |
| ATCACCACGACAGGAGAGTT+TGG | 0.314257 | 2.3:-12890997 | None:intergenic |
| CAGAGCCGCCTTATTGAGTT+TGG | 0.322468 | 2.3:+12892352 | MS.gene90651:intron |
| TTGCAACGTTGCAGTCAAAA+AGG | 0.323009 | 2.3:-12891774 | None:intergenic |
| TTGAATCACCAAACTCAATA+AGG | 0.359600 | 2.3:-12892360 | None:intergenic |
| ATTGGAATTTGGTACACAAT+TGG | 0.374723 | 2.3:+12892004 | MS.gene90651:CDS |
| AGCTGAGACAGATACATAAC+AGG | 0.379997 | 2.3:+12890657 | MS.gene90651:intron |
| AATGTTCCGCTAACACAAAT+TGG | 0.380234 | 2.3:+12892219 | MS.gene90651:CDS |
| ATCAGCTAAAGGAACCATTA+AGG | 0.386278 | 2.3:-12891283 | None:intergenic |
| TCAATTCAATTTGCAGAGTC+TGG | 0.386430 | 2.3:+12889970 | MS.gene90651:CDS |
| GAGGATCCATTGTTCTTTGT+GGG | 0.405119 | 2.3:+12890930 | MS.gene90651:CDS |
| GCCAGAATCAAAATTATTGC+TGG | 0.405520 | 2.3:+12891540 | MS.gene90651:CDS |
| AGGTTGAGAAACTGAACTAA+TGG | 0.409819 | 2.3:+12892536 | MS.gene90651:CDS |
| TTCCCTCTAGATTTGCTACC+AGG | 0.420242 | 2.3:-12892421 | None:intergenic |
| CCTGCCCCTGAGCATCAATT+AGG | 0.430459 | 2.3:-12891822 | None:intergenic |
| CTATGTGGTACGACTGCTAC+AGG | 0.432550 | 2.3:+12890902 | MS.gene90651:CDS |
| ACCGGAACTGAATCTGTTGC+TGG | 0.434220 | 2.3:+12890008 | MS.gene90651:CDS |
| CAAGGTCTTAGTCAAGCATC+TGG | 0.435782 | 2.3:+12891258 | MS.gene90651:CDS |
| TCAAGACCTAATTGATGCTC+AGG | 0.443181 | 2.3:+12891816 | MS.gene90651:CDS |
| CAGATTCAAGTTGGATGTCC+AGG | 0.451872 | 2.3:+12891720 | MS.gene90651:intron |
| ACCAGCAACAGATTCAGTTC+CGG | 0.460456 | 2.3:-12890009 | None:intergenic |
| ATACTTGGCACCGAAGAGAT+TGG | 0.467029 | 2.3:+12892472 | MS.gene90651:CDS |
| TCACCACGACAGGAGAGTTT+GGG | 0.473991 | 2.3:-12890996 | None:intergenic |
| TGATCTTTCTCCAATCTCTT+CGG | 0.474139 | 2.3:-12892482 | None:intergenic |
| AGAGGATCCATTGTTCTTTG+TGG | 0.474308 | 2.3:+12890929 | MS.gene90651:CDS |
| GTATTGAGCCCGAGTACAAT+TGG | 0.487857 | 2.3:+12891490 | MS.gene90651:CDS |
| GATTGGTGGTGTTGCAATTG+AGG | 0.491080 | 2.3:+12891227 | MS.gene90651:CDS |
| AACCAAAACTAGGAATGATC+TGG | 0.495419 | 2.3:+12892381 | MS.gene90651:CDS |
| TTAAAGTTGAGATCACTGAT+TGG | 0.499548 | 2.3:+12891986 | MS.gene90651:CDS |
| GTTTCACCAATTTGTGTTAG+CGG | 0.500107 | 2.3:-12892225 | None:intergenic |
| ACGACTGCTACAGGGGTAAG+AGG | 0.500517 | 2.3:+12890911 | MS.gene90651:CDS |
| TATTTGATATTTGCTCTATG+TGG | 0.503232 | 2.3:+12890887 | MS.gene90651:CDS |
| AGAGCAAATATCAAATATAG+AGG | 0.505694 | 2.3:-12890881 | None:intergenic |
| ATGATGCTGATCTGATCAAA+AGG | 0.508055 | 2.3:+12892055 | MS.gene90651:CDS |
| CCTAATTGATGCTCAGGGGC+AGG | 0.511420 | 2.3:+12891822 | MS.gene90651:CDS |
| TTGCTAGATGCAATCAGAGC+AGG | 0.517209 | 2.3:+12891574 | MS.gene90651:CDS |
| TTGGTGATTCAACCAAAACT+AGG | 0.519032 | 2.3:+12892371 | MS.gene90651:CDS |
| GCAGAGGATTCTGCTATACT+TGG | 0.527026 | 2.3:+12892457 | MS.gene90651:CDS |
| GTAGCAAATCTAGAGGGAAA+AGG | 0.527203 | 2.3:+12892425 | MS.gene90651:CDS |
| TGGCCAGAGAGTGCCGCCAC+CGG | 0.529278 | 2.3:+12889990 | MS.gene90651:CDS |
| ACAAATTGGTGAAACGCGAT+TGG | 0.532703 | 2.3:+12892233 | MS.gene90651:CDS |
| AGAGCAGGAATGCTGTTCCT+AGG | 0.536985 | 2.3:+12891589 | MS.gene90651:CDS |
| CTGCAACGTTGCAAATTATG+TGG | 0.538038 | 2.3:+12891783 | MS.gene90651:CDS |
| AAAAGTAAAATCACCACGAC+AGG | 0.538099 | 2.3:-12891006 | None:intergenic |
| GCAATTGAGGTGACTCATCA+AGG | 0.540904 | 2.3:+12891240 | MS.gene90651:CDS |
| ATCATCATTTAAGATCAGCT+TGG | 0.542992 | 2.3:-12891085 | None:intergenic |
| TTATAATTACAGATTCAAGT+TGG | 0.543489 | 2.3:+12891711 | MS.gene90651:intron |
| AATTGGTGAAACGCGATTGG+AGG | 0.548051 | 2.3:+12892236 | MS.gene90651:CDS |
| ATCATAATACCAATTGTACT+CGG | 0.549386 | 2.3:-12891499 | None:intergenic |
| GTCCAGGTGATGGACAATAC+AGG | 0.558482 | 2.3:+12891736 | MS.gene90651:CDS |
| ATCCTGTATTGTCCATCACC+TGG | 0.560069 | 2.3:-12891738 | None:intergenic |
| AACAGATTCAGTTCCGGTGG+CGG | 0.562031 | 2.3:-12890003 | None:intergenic |
| GGATCAATATGCTATTAGAA+TGG | 0.562263 | 2.3:+12890951 | MS.gene90651:CDS |
| ATTGTCATTAACAGGATTGG+TGG | 0.571235 | 2.3:+12891213 | MS.gene90651:intron |
| CAAGTTGGATGTCCAGGTGA+TGG | 0.577260 | 2.3:+12891726 | MS.gene90651:CDS |
| CAAGACCTAATTGATGCTCA+GGG | 0.583471 | 2.3:+12891817 | MS.gene90651:CDS |
| CAAAACTAGGAATGATCTGG+TGG | 0.588453 | 2.3:+12892384 | MS.gene90651:CDS |
| GAATCAAAATTATTGCTGGA+AGG | 0.597398 | 2.3:+12891544 | MS.gene90651:CDS |
| GAAAAGGTCTGCTGATGCAG+AGG | 0.597431 | 2.3:+12892441 | MS.gene90651:CDS |
| ATGTGGTACGACTGCTACAG+GGG | 0.599739 | 2.3:+12890904 | MS.gene90651:CDS |
| TATGTGGTACGACTGCTACA+GGG | 0.603890 | 2.3:+12890903 | MS.gene90651:CDS |
| GTGGATAACGAGCAAACACC+TGG | 0.605293 | 2.3:+12892403 | MS.gene90651:CDS |
| ATTGATCCCACAAAGAACAA+TGG | 0.608210 | 2.3:-12890936 | None:intergenic |
| GACAGATACATAACAGGGGA+AGG | 0.615580 | 2.3:+12890663 | MS.gene90651:CDS |
| CGACCCAAACTCTCCTGTCG+TGG | 0.617234 | 2.3:+12890993 | MS.gene90651:CDS |
| CGAGAAACATAATATTAAGG+TGG | 0.617641 | 2.3:+12892083 | MS.gene90651:CDS |
| TCATAATACCAATTGTACTC+GGG | 0.619427 | 2.3:-12891498 | None:intergenic |
| ACGTTGCAAATTATGTGGGA+AGG | 0.628212 | 2.3:+12891788 | MS.gene90651:CDS |
| AGCAACAGATTCAGTTCCGG+TGG | 0.634090 | 2.3:-12890006 | None:intergenic |
| GCTGAGACAGATACATAACA+GGG | 0.635584 | 2.3:+12890658 | MS.gene90651:intron |
| ACACCTGGTAGCAAATCTAG+AGG | 0.644022 | 2.3:+12892418 | MS.gene90651:CDS |
| TGCAACGTTGCAAATTATGT+GGG | 0.650888 | 2.3:+12891784 | MS.gene90651:CDS |
| CACCTGGTAGCAAATCTAGA+GGG | 0.653041 | 2.3:+12892419 | MS.gene90651:CDS |
| AATCACCAAACTCAATAAGG+CGG | 0.691374 | 2.3:-12892357 | None:intergenic |
| GCAGAAGATGATATGTGTCA+AGG | 0.693566 | 2.3:+12892516 | MS.gene90651:CDS |
| TGATGCATGTATCAAGTGTG+CGG | 0.727643 | 2.3:+12891518 | MS.gene90651:CDS |
| AAGACCTAATTGATGCTCAG+GGG | 0.736491 | 2.3:+12891818 | MS.gene90651:CDS |
| CTGAGACAGATACATAACAG+GGG | 0.762774 | 2.3:+12890659 | MS.gene90651:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATTCTAAATATTTAT+AGG | + | chr2.3:12890285-12890304 | MS.gene90651:intron | 10.0% |
| !! | CAAAATTCTAAATATTTATA+GGG | + | chr2.3:12890286-12890305 | MS.gene90651:intron | 10.0% |
| !!! | TTTTAAATATTTTGAACCAT+GGG | + | chr2.3:12892292-12892311 | MS.gene90651:intron | 15.0% |
| !!! | TTTTTAAATATTTTGAACCA+TGG | + | chr2.3:12892291-12892310 | MS.gene90651:intron | 15.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | - | chr2.3:12890068-12890087 | None:intergenic | 20.0% |
| !! | ACAATTATTAGGTTCTATAA+AGG | - | chr2.3:12891190-12891209 | None:intergenic | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | - | chr2.3:12890067-12890086 | None:intergenic | 20.0% |
| !! | GAAAATAAAATTAATCGCAT+TGG | + | chr2.3:12891390-12891409 | MS.gene90651:intron | 20.0% |
| !! | GAAATCTTGAAAAAAATTGA+CGG | + | chr2.3:12890495-12890514 | MS.gene90651:intron | 20.0% |
| !! | TATCGAGAAACATAATATTA+AGG | + | chr2.3:12892080-12892099 | MS.gene90651:CDS | 20.0% |
| !! | TTATAATTACAGATTCAAGT+TGG | + | chr2.3:12891711-12891730 | MS.gene90651:intron | 20.0% |
| !! | TTTCTTCTTAAAAGAAAAAG+AGG | + | chr2.3:12890743-12890762 | MS.gene90651:intron | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr2.3:12890254-12890273 | MS.gene90651:intron | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr2.3:12890273-12890254 | None:intergenic | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr2.3:12890255-12890274 | MS.gene90651:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr2.3:12890274-12890255 | None:intergenic | 20.0% |
| !!! | ATGCTGATGAAAAATTTTAT+AGG | + | chr2.3:12890194-12890213 | MS.gene90651:intron | 20.0% |
| !!! | ATGTTGATGGAAAATTTTAT+AGG | + | chr2.3:12890225-12890244 | MS.gene90651:intron | 20.0% |
| !!! | GATCTTAAATGATGATTTTT+CGG | + | chr2.3:12891092-12891111 | MS.gene90651:CDS | 20.0% |
| !!! | GCTGATGTAAAAATTTTATA+GGG | + | chr2.3:12890164-12890183 | MS.gene90651:intron | 20.0% |
| !!! | TCTCTGTGTAATTTAAAATA+GGG | - | chr2.3:12890329-12890348 | None:intergenic | 20.0% |
| !!! | TGCTGATGAAAAATTTTATA+GGG | + | chr2.3:12890195-12890214 | MS.gene90651:intron | 20.0% |
| !!! | TGCTGATGTAAAAATTTTAT+AGG | + | chr2.3:12890163-12890182 | MS.gene90651:intron | 20.0% |
| !!! | TGTATATATTTTGATTGCTT+GGG | + | chr2.3:12891654-12891673 | MS.gene90651:intron | 20.0% |
| !!! | TGTTGATGGAAAATTTTATA+GGG | + | chr2.3:12890226-12890245 | MS.gene90651:intron | 20.0% |
| !!! | TTAAGGTGGTAATTTTTTAT+AGG | + | chr2.3:12892097-12892116 | MS.gene90651:intron | 20.0% |
| !!! | TTCTCTGTGTAATTTAAAAT+AGG | - | chr2.3:12890330-12890349 | None:intergenic | 20.0% |
| !!! | TTGCTGGTAATTATTTTAAA+GGG | + | chr2.3:12890024-12890043 | MS.gene90651:intron | 20.0% |
| ! | AATCAGATACAAAGAACAAT+TGG | - | chr2.3:12890605-12890624 | None:intergenic | 25.0% |
| ! | AGAGCAAATATCAAATATAG+AGG | - | chr2.3:12890884-12890903 | None:intergenic | 25.0% |
| ! | ATCATAATACCAATTGTACT+CGG | - | chr2.3:12891502-12891521 | None:intergenic | 25.0% |
| ! | ATGACAATCAGACAATTATT+AGG | - | chr2.3:12891201-12891220 | None:intergenic | 25.0% |
| ! | GCAAGTAATAATAACATATC+TGG | + | chr2.3:12891133-12891152 | MS.gene90651:intron | 25.0% |
| ! | GGAAAACTCAAAAAATACTA+TGG | + | chr2.3:12891030-12891049 | MS.gene90651:CDS | 25.0% |
| ! | GTTCCTAGGTAAATAATTAA+GGG | + | chr2.3:12891603-12891622 | MS.gene90651:intron | 25.0% |
| ! | TAGATGCAAACTTAAAGTAA+AGG | + | chr2.3:12890473-12890492 | MS.gene90651:intron | 25.0% |
| ! | TATTTGATATTTGCTCTATG+TGG | + | chr2.3:12890887-12890906 | MS.gene90651:CDS | 25.0% |
| ! | TGTTCCTAGGTAAATAATTA+AGG | + | chr2.3:12891602-12891621 | MS.gene90651:intron | 25.0% |
| ! | TTAAAAGAAAAAGAGGTGAA+TGG | + | chr2.3:12890750-12890769 | MS.gene90651:intron | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | + | chr2.3:12890131-12890150 | MS.gene90651:intron | 25.0% |
| !! | ATAGTTTTTGCTTCTATTTG+TGG | + | chr2.3:12891468-12891487 | MS.gene90651:CDS | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | + | chr2.3:12890132-12890151 | MS.gene90651:intron | 25.0% |
| !! | TATTAGTTTAATGTTTCCCA+TGG | - | chr2.3:12892311-12892330 | None:intergenic | 25.0% |
| !! | TGTTGATTAATGAATGACAT+GGG | + | chr2.3:12890627-12890646 | MS.gene90651:intron | 25.0% |
| !!! | AAAAAATACTATGGTGCTAT+GGG | + | chr2.3:12891039-12891058 | MS.gene90651:CDS | 25.0% |
| !!! | CAATTGGTTTTGTTTAACTT+CGG | - | chr2.3:12890589-12890608 | None:intergenic | 25.0% |
| !!! | CTGTATATATTTTGATTGCT+TGG | + | chr2.3:12891653-12891672 | MS.gene90651:intron | 25.0% |
| !!! | GTTGCTGGTAATTATTTTAA+AGG | + | chr2.3:12890023-12890042 | MS.gene90651:intron | 25.0% |
| !!! | TCTTTTTTTTATGCCTTTCA+TGG | + | chr2.3:12890837-12890856 | MS.gene90651:intron | 25.0% |
| AAATTAATCGCATTGGAGAA+TGG | + | chr2.3:12891397-12891416 | MS.gene90651:intron | 30.0% | |
| AATTAATCGCATTGGAGAAT+GGG | + | chr2.3:12891398-12891417 | MS.gene90651:intron | 30.0% | |
| AGAATTGATTGAGTCATCTT+AGG | + | chr2.3:12891338-12891357 | MS.gene90651:intron | 30.0% | |
| ATAGGGACTAAAAATGTTGA+TGG | + | chr2.3:12890212-12890231 | MS.gene90651:intron | 30.0% | |
| ATGTGGATCAGTTTCTTATA+TGG | + | chr2.3:12890701-12890720 | MS.gene90651:intron | 30.0% | |
| ATTGGAATTTGGTACACAAT+TGG | + | chr2.3:12892004-12892023 | MS.gene90651:CDS | 30.0% | |
| ATTGTCTGATTGTCATTAAC+AGG | + | chr2.3:12891205-12891224 | MS.gene90651:intron | 30.0% | |
| CATTTGAATCTATGCTCATT+TGG | + | chr2.3:12890387-12890406 | MS.gene90651:intron | 30.0% | |
| CGAGAAACATAATATTAAGG+TGG | + | chr2.3:12892083-12892102 | MS.gene90651:CDS | 30.0% | |
| GAATCAAAATTATTGCTGGA+AGG | + | chr2.3:12891544-12891563 | MS.gene90651:CDS | 30.0% | |
| GGATCAATATGCTATTAGAA+TGG | + | chr2.3:12890951-12890970 | MS.gene90651:CDS | 30.0% | |
| GTACACAATTGGCAAAATTA+TGG | + | chr2.3:12892015-12892034 | MS.gene90651:CDS | 30.0% | |
| TCAAATATAGAGGACCTAAA+AGG | - | chr2.3:12890874-12890893 | None:intergenic | 30.0% | |
| TCATAATACCAATTGTACTC+GGG | - | chr2.3:12891501-12891520 | None:intergenic | 30.0% | |
| TGACCCTTAATTATTTACCT+AGG | - | chr2.3:12891609-12891628 | None:intergenic | 30.0% | |
| TGTTGATATAAGCTATAGAC+TGG | - | chr2.3:12891167-12891186 | None:intergenic | 30.0% | |
| TTAAAGTTGAGATCACTGAT+TGG | + | chr2.3:12891986-12892005 | MS.gene90651:CDS | 30.0% | |
| TTGAATCACCAAACTCAATA+AGG | - | chr2.3:12892363-12892382 | None:intergenic | 30.0% | |
| TTTAGTCCCTAAAATGCTTA+AGG | - | chr2.3:12890141-12890160 | None:intergenic | 30.0% | |
| ! | ATCATCATTTAAGATCAGCT+TGG | - | chr2.3:12891088-12891107 | None:intergenic | 30.0% |
| ! | CAAAAAATACTATGGTGCTA+TGG | + | chr2.3:12891038-12891057 | MS.gene90651:CDS | 30.0% |
| ! | TGGTTGTATGTATTCCTTTT+AGG | + | chr2.3:12890857-12890876 | MS.gene90651:intron | 30.0% |
| !! | GTGTTGATTAATGAATGACA+TGG | + | chr2.3:12890626-12890645 | MS.gene90651:intron | 30.0% |
| !!! | TCCAGCAATAATTTTGATTC+TGG | - | chr2.3:12891544-12891563 | None:intergenic | 30.0% |
| AAAAGTAAAATCACCACGAC+AGG | - | chr2.3:12891009-12891028 | None:intergenic | 35.0% | |
| AACCAAAACTAGGAATGATC+TGG | + | chr2.3:12892381-12892400 | MS.gene90651:CDS | 35.0% | |
| AATCACCAAACTCAATAAGG+CGG | - | chr2.3:12892360-12892379 | None:intergenic | 35.0% | |
| AATGTTCCGCTAACACAAAT+TGG | + | chr2.3:12892219-12892238 | MS.gene90651:CDS | 35.0% | |
| ATCAGCTAAAGGAACCATTA+AGG | - | chr2.3:12891286-12891305 | None:intergenic | 35.0% | |
| ATGATGCTGATCTGATCAAA+AGG | + | chr2.3:12892055-12892074 | MS.gene90651:CDS | 35.0% | |
| ATGCTTAAGGAAAATGTCAC+AGG | - | chr2.3:12890128-12890147 | None:intergenic | 35.0% | |
| ATTGATCCCACAAAGAACAA+TGG | - | chr2.3:12890939-12890958 | None:intergenic | 35.0% | |
| ATTGTCATTAACAGGATTGG+TGG | + | chr2.3:12891213-12891232 | MS.gene90651:intron | 35.0% | |
| CAAGCTCATTGACATAACAT+TGG | + | chr2.3:12890782-12890801 | MS.gene90651:intron | 35.0% | |
| CTGATTGTCATTAACAGGAT+TGG | + | chr2.3:12891210-12891229 | MS.gene90651:intron | 35.0% | |
| GCCAGAATCAAAATTATTGC+TGG | + | chr2.3:12891540-12891559 | MS.gene90651:CDS | 35.0% | |
| GGAATACATACAACCATGAA+AGG | - | chr2.3:12890853-12890872 | None:intergenic | 35.0% | |
| GTTTCACCAATTTGTGTTAG+CGG | - | chr2.3:12892228-12892247 | None:intergenic | 35.0% | |
| TCAAAAACCATACCACGAAT+TGG | - | chr2.3:12891886-12891905 | None:intergenic | 35.0% | |
| TCAATTCAATTTGCAGAGTC+TGG | + | chr2.3:12889970-12889989 | MS.gene90651:CDS | 35.0% | |
| TGATCTTTCTCCAATCTCTT+CGG | - | chr2.3:12892485-12892504 | None:intergenic | 35.0% | |
| TGATTATCTGCTTACACTAC+AGG | + | chr2.3:12891913-12891932 | MS.gene90651:intron | 35.0% | |
| TGCAACGTTGCAAATTATGT+GGG | + | chr2.3:12891784-12891803 | MS.gene90651:CDS | 35.0% | |
| TGCTTAAGGAAAATGTCACA+GGG | - | chr2.3:12890127-12890146 | None:intergenic | 35.0% | |
| ! | TGAGATCACTGATTGGAATT+TGG | + | chr2.3:12891993-12892012 | MS.gene90651:CDS | 35.0% |
| ! | TTGGTGATTCAACCAAAACT+AGG | + | chr2.3:12892371-12892390 | MS.gene90651:CDS | 35.0% |
| ! | TTGTTTTCAGATTGCTGAAG+AGG | + | chr2.3:12892179-12892198 | MS.gene90651:intron | 35.0% |
| !! | GTCGTGGTGATTTTACTTTT+TGG | + | chr2.3:12891009-12891028 | MS.gene90651:CDS | 35.0% |
| !! | TGATGATTTTTCGGCTGTTA+AGG | + | chr2.3:12891101-12891120 | MS.gene90651:CDS | 35.0% |
| AAGACCTAATTGATGCTCAG+GGG | + | chr2.3:12891818-12891837 | MS.gene90651:CDS | 40.0% | |
| ACAAATTGGTGAAACGCGAT+TGG | + | chr2.3:12892233-12892252 | MS.gene90651:CDS | 40.0% | |
| ACGTTGCAAATTATGTGGGA+AGG | + | chr2.3:12891788-12891807 | MS.gene90651:CDS | 40.0% | |
| AGAGGATCCATTGTTCTTTG+TGG | + | chr2.3:12890929-12890948 | MS.gene90651:CDS | 40.0% | |
| AGCTGAGACAGATACATAAC+AGG | + | chr2.3:12890657-12890676 | MS.gene90651:intron | 40.0% | |
| CAAAACTAGGAATGATCTGG+TGG | + | chr2.3:12892384-12892403 | MS.gene90651:CDS | 40.0% | |
| CAAGACCTAATTGATGCTCA+GGG | + | chr2.3:12891817-12891836 | MS.gene90651:CDS | 40.0% | |
| CGAATTGGCAAGGTTAATAC+AGG | - | chr2.3:12891871-12891890 | None:intergenic | 40.0% | |
| CTGAGACAGATACATAACAG+GGG | + | chr2.3:12890659-12890678 | MS.gene90651:CDS | 40.0% | |
| CTGCAACGTTGCAAATTATG+TGG | + | chr2.3:12891783-12891802 | MS.gene90651:CDS | 40.0% | |
| GAGGATCCATTGTTCTTTGT+GGG | + | chr2.3:12890930-12890949 | MS.gene90651:CDS | 40.0% | |
| GCAGAAGATGATATGTGTCA+AGG | + | chr2.3:12892516-12892535 | MS.gene90651:CDS | 40.0% | |
| GCTCATTGACATAACATTGG+AGG | + | chr2.3:12890785-12890804 | MS.gene90651:intron | 40.0% | |
| GCTGAGACAGATACATAACA+GGG | + | chr2.3:12890658-12890677 | MS.gene90651:intron | 40.0% | |
| GTAGCAAATCTAGAGGGAAA+AGG | + | chr2.3:12892425-12892444 | MS.gene90651:CDS | 40.0% | |
| GTATTAACCTTGCCAATTCG+TGG | + | chr2.3:12891871-12891890 | MS.gene90651:intron | 40.0% | |
| TCAAGACCTAATTGATGCTC+AGG | + | chr2.3:12891816-12891835 | MS.gene90651:CDS | 40.0% | |
| TGAAGCTGATCATCAGCTAA+AGG | - | chr2.3:12891297-12891316 | None:intergenic | 40.0% | |
| TGATGCATGTATCAAGTGTG+CGG | + | chr2.3:12891518-12891537 | MS.gene90651:CDS | 40.0% | |
| TTGCAACGTTGCAGTCAAAA+AGG | - | chr2.3:12891777-12891796 | None:intergenic | 40.0% | |
| ! | AACGCGATTGGAGGTATAAA+CGG | + | chr2.3:12892245-12892264 | MS.gene90651:intron | 40.0% |
| ! | CACCAGATCATTCCTAGTTT+TGG | - | chr2.3:12892386-12892405 | None:intergenic | 40.0% |
| ! | TCAAGCATCTGGAACCTTAA+TGG | + | chr2.3:12891269-12891288 | MS.gene90651:CDS | 40.0% |
| AACAATTCTCTTGGTTGCCG+GGG | + | chr2.3:12891938-12891957 | MS.gene90651:intron | 45.0% | |
| AACCATACCACGAATTGGCA+AGG | - | chr2.3:12891881-12891900 | None:intergenic | 45.0% | |
| AACCTTGCCAATTCGTGGTA+TGG | + | chr2.3:12891876-12891895 | MS.gene90651:intron | 45.0% | |
| AATTGGTGAAACGCGATTGG+AGG | + | chr2.3:12892236-12892255 | MS.gene90651:CDS | 45.0% | |
| ACACCTGGTAGCAAATCTAG+AGG | + | chr2.3:12892418-12892437 | MS.gene90651:CDS | 45.0% | |
| ACCAGCAACAGATTCAGTTC+CGG | - | chr2.3:12890012-12890031 | None:intergenic | 45.0% | |
| ATCCTGTATTGTCCATCACC+TGG | - | chr2.3:12891741-12891760 | None:intergenic | 45.0% | |
| ATTAAGGGTCACGCTCATAC+AGG | + | chr2.3:12891618-12891637 | MS.gene90651:intron | 45.0% | |
| CAACAATTCTCTTGGTTGCC+GGG | + | chr2.3:12891937-12891956 | MS.gene90651:intron | 45.0% | |
| CAAGGTCTTAGTCAAGCATC+TGG | + | chr2.3:12891258-12891277 | MS.gene90651:CDS | 45.0% | |
| CAATAAGGCGGCTCTGTAAA+TGG | - | chr2.3:12892348-12892367 | None:intergenic | 45.0% | |
| CACCTGGTAGCAAATCTAGA+GGG | + | chr2.3:12892419-12892438 | MS.gene90651:CDS | 45.0% | |
| CCAACAATTCTCTTGGTTGC+CGG | + | chr2.3:12891936-12891955 | MS.gene90651:intron | 45.0% | |
| CTACAGGCCAACAATTCTCT+TGG | + | chr2.3:12891929-12891948 | MS.gene90651:intron | 45.0% | |
| CTGATGATCAGCTTCAGTCA+AGG | + | chr2.3:12891301-12891320 | MS.gene90651:intron | 45.0% | |
| GACAGATACATAACAGGGGA+AGG | + | chr2.3:12890663-12890682 | MS.gene90651:CDS | 45.0% | |
| GCAATTGAGGTGACTCATCA+AGG | + | chr2.3:12891240-12891259 | MS.gene90651:CDS | 45.0% | |
| GCAGAGGATTCTGCTATACT+TGG | + | chr2.3:12892457-12892476 | MS.gene90651:CDS | 45.0% | |
| GTATTGAGCCCGAGTACAAT+TGG | + | chr2.3:12891490-12891509 | MS.gene90651:CDS | 45.0% | |
| TATGTGGTACGACTGCTACA+GGG | + | chr2.3:12890903-12890922 | MS.gene90651:CDS | 45.0% | |
| TGTTTACCAACCAACAACCC+CGG | - | chr2.3:12891958-12891977 | None:intergenic | 45.0% | |
| TTAAGGGTCACGCTCATACA+GGG | + | chr2.3:12891619-12891638 | MS.gene90651:intron | 45.0% | |
| TTGCTAGATGCAATCAGAGC+AGG | + | chr2.3:12891574-12891593 | MS.gene90651:CDS | 45.0% | |
| ! | ATACTTGGCACCGAAGAGAT+TGG | + | chr2.3:12892472-12892491 | MS.gene90651:CDS | 45.0% |
| ! | GGTGTCTCGAATGCCTTTTA+TGG | + | chr2.3:12891060-12891079 | MS.gene90651:CDS | 45.0% |
| !! | CAGATTCAAGTTGGATGTCC+AGG | + | chr2.3:12891720-12891739 | MS.gene90651:intron | 45.0% |
| !! | GATCAGCTTGGTGCCATAAA+AGG | - | chr2.3:12891076-12891095 | None:intergenic | 45.0% |
| !! | GATTGGTGGTGTTGCAATTG+AGG | + | chr2.3:12891227-12891246 | MS.gene90651:CDS | 45.0% |
| !! | TTCCCTCTAGATTTGCTACC+AGG | - | chr2.3:12892424-12892443 | None:intergenic | 45.0% |
| !!! | ATTAATTTTATTTTCTAATT+AGG | - | chr2.3:12891385-12891404 | None:intergenic | 5.0% |
| !!! | TTAATTTTATTTTCTAATTA+GGG | - | chr2.3:12891384-12891403 | None:intergenic | 5.0% |
| AACAGATTCAGTTCCGGTGG+CGG | - | chr2.3:12890006-12890025 | None:intergenic | 50.0% | |
| ACCGGAACTGAATCTGTTGC+TGG | + | chr2.3:12890008-12890027 | MS.gene90651:CDS | 50.0% | |
| AGAGCAGGAATGCTGTTCCT+AGG | + | chr2.3:12891589-12891608 | MS.gene90651:CDS | 50.0% | |
| AGCAACAGATTCAGTTCCGG+TGG | - | chr2.3:12890009-12890028 | None:intergenic | 50.0% | |
| AGGGGAAGGTGACAGTTTCA+GGG | + | chr2.3:12890677-12890696 | MS.gene90651:intron | 50.0% | |
| ATCACCACGACAGGAGAGTT+TGG | - | chr2.3:12891000-12891019 | None:intergenic | 50.0% | |
| ATGTGGTACGACTGCTACAG+GGG | + | chr2.3:12890904-12890923 | MS.gene90651:CDS | 50.0% | |
| CCGGCAACCAAGAGAATTGT+TGG | - | chr2.3:12891939-12891958 | None:intergenic | 50.0% | |
| CTATGTGGTACGACTGCTAC+AGG | + | chr2.3:12890902-12890921 | MS.gene90651:CDS | 50.0% | |
| GAAAAGGTCTGCTGATGCAG+AGG | + | chr2.3:12892441-12892460 | MS.gene90651:CDS | 50.0% | |
| GGTGACAGTTTCAGGGAATG+TGG | + | chr2.3:12890684-12890703 | MS.gene90651:intron | 50.0% | |
| GTGGATAACGAGCAAACACC+TGG | + | chr2.3:12892403-12892422 | MS.gene90651:CDS | 50.0% | |
| TCACCACGACAGGAGAGTTT+GGG | - | chr2.3:12890999-12891018 | None:intergenic | 50.0% | |
| ! | CAAGTTGGATGTCCAGGTGA+TGG | + | chr2.3:12891726-12891745 | MS.gene90651:CDS | 50.0% |
| ! | CAGAGCCGCCTTATTGAGTT+TGG | + | chr2.3:12892352-12892371 | MS.gene90651:intron | 50.0% |
| !! | GTCCAGGTGATGGACAATAC+AGG | + | chr2.3:12891736-12891755 | MS.gene90651:CDS | 50.0% |
| ACGACTGCTACAGGGGTAAG+AGG | + | chr2.3:12890911-12890930 | MS.gene90651:CDS | 55.0% | |
| CAGGGGAAGGTGACAGTTTC+AGG | + | chr2.3:12890676-12890695 | MS.gene90651:intron | 55.0% | |
| CCTAATTGATGCTCAGGGGC+AGG | + | chr2.3:12891822-12891841 | MS.gene90651:CDS | 55.0% | |
| CCTGCCCCTGAGCATCAATT+AGG | - | chr2.3:12891825-12891844 | None:intergenic | 55.0% | |
| CGACCCAAACTCTCCTGTCG+TGG | + | chr2.3:12890993-12891012 | MS.gene90651:CDS | 60.0% | |
| CTCTTGGTTGCCGGGGTTGT+TGG | + | chr2.3:12891945-12891964 | MS.gene90651:intron | 60.0% | |
| TGGTTGCCGGGGTTGTTGGT+TGG | + | chr2.3:12891949-12891968 | MS.gene90651:intron | 60.0% | |
| ! | GTTCCGGTGGCGGCACTCTC+TGG | - | chr2.3:12889996-12890015 | None:intergenic | 70.0% |
| !! | TGGCCAGAGAGTGCCGCCAC+CGG | + | chr2.3:12889990-12890009 | MS.gene90651:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 12889964 | 12892555 | 12889964 | ID=MS.gene90651 |
| chr2.3 | mRNA | 12889964 | 12892555 | 12889964 | ID=MS.gene90651.t1;Parent=MS.gene90651 |
| chr2.3 | exon | 12889964 | 12890029 | 12889964 | ID=MS.gene90651.t1.exon1;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12889964 | 12890029 | 12889964 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| chr2.3 | exon | 12890659 | 12890684 | 12890659 | ID=MS.gene90651.t1.exon2;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12890659 | 12890684 | 12890659 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| chr2.3 | exon | 12890879 | 12891136 | 12890879 | ID=MS.gene90651.t1.exon3;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12890879 | 12891136 | 12890879 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| chr2.3 | exon | 12891227 | 12891290 | 12891227 | ID=MS.gene90651.t1.exon4;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12891227 | 12891290 | 12891227 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| chr2.3 | exon | 12891456 | 12891610 | 12891456 | ID=MS.gene90651.t1.exon5;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12891456 | 12891610 | 12891456 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| chr2.3 | exon | 12891723 | 12891843 | 12891723 | ID=MS.gene90651.t1.exon6;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12891723 | 12891843 | 12891723 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| chr2.3 | exon | 12891979 | 12892104 | 12891979 | ID=MS.gene90651.t1.exon7;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12891979 | 12892104 | 12891979 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| chr2.3 | exon | 12892189 | 12892257 | 12892189 | ID=MS.gene90651.t1.exon8;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12892189 | 12892257 | 12892189 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| chr2.3 | exon | 12892355 | 12892555 | 12892355 | ID=MS.gene90651.t1.exon9;Parent=MS.gene90651.t1 |
| chr2.3 | CDS | 12892355 | 12892555 | 12892355 | ID=cds.MS.gene90651.t1;Parent=MS.gene90651.t1 |
| Gene Sequence |
| Protein sequence |
