Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54090.t1 | XP_013465758.2 | 82.8 | 536 | 88 | 2 | 1 | 536 | 1 | 532 | 3.80E-127 | 466.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54090.t1 | Q9UQ35 | 40.1 | 142 | 80 | 2 | 1 | 138 | 1 | 141 | 1.0e-16 | 90.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54090.t1 | A0A396JF91 | 82.8 | 536 | 88 | 2 | 1 | 536 | 1 | 532 | 2.7e-127 | 466.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene54090 | 0.830652 | 2.60E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene54090 | 0.810866 | 9.32E-51 | -1.69E-46 |
| MS.gene049419 | MS.gene54090 | -0.811313 | 7.45E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene54090 | 0.834842 | 2.37E-56 | -1.69E-46 |
| MS.gene049825 | MS.gene54090 | 0.803317 | 3.69E-49 | -1.69E-46 |
| MS.gene050031 | MS.gene54090 | 0.805701 | 1.18E-49 | -1.69E-46 |
| MS.gene050284 | MS.gene54090 | -0.836279 | 1.03E-56 | -1.69E-46 |
| MS.gene050300 | MS.gene54090 | -0.80756 | 4.76E-50 | -1.69E-46 |
| MS.gene050799 | MS.gene54090 | 0.803681 | 3.10E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene54090 | -0.808047 | 3.75E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene54090 | 0.800055 | 1.72E-48 | -1.69E-46 |
| MS.gene052519 | MS.gene54090 | 0.81694 | 4.27E-52 | -1.69E-46 |
| MS.gene052533 | MS.gene54090 | 0.807843 | 4.15E-50 | -1.69E-46 |
| MS.gene052534 | MS.gene54090 | 0.807964 | 3.91E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene54090 | 0.807028 | 6.17E-50 | -1.69E-46 |
| MS.gene052685 | MS.gene54090 | 0.828039 | 1.12E-54 | -1.69E-46 |
| MS.gene053006 | MS.gene54090 | 0.804481 | 2.12E-49 | -1.69E-46 |
| MS.gene053045 | MS.gene54090 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene54090 | 0.836816 | 7.50E-57 | -1.69E-46 |
| MS.gene053340 | MS.gene54090 | 0.814101 | 1.83E-51 | -1.69E-46 |
| MS.gene053963 | MS.gene54090 | 0.82135 | 4.23E-53 | -1.69E-46 |
| MS.gene054222 | MS.gene54090 | 0.813008 | 3.18E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene54090 | 0.812782 | 3.57E-51 | -1.69E-46 |
| MS.gene055555 | MS.gene54090 | 0.826035 | 3.38E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene54090 | 0.810813 | 9.57E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene54090 | 0.807302 | 5.40E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene54090 | 0.815782 | 7.75E-52 | -1.69E-46 |
| MS.gene055841 | MS.gene54090 | 0.827537 | 1.48E-54 | -1.69E-46 |
| MS.gene05636 | MS.gene54090 | 0.821952 | 3.07E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene54090 | 0.811922 | 5.49E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene54090 | 0.80889 | 2.48E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene54090 | 0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene54090 | 0.86129 | 1.14E-63 | -1.69E-46 |
| MS.gene057208 | MS.gene54090 | 0.807058 | 6.08E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene54090 | 0.801869 | 7.35E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene54090 | 0.816597 | 5.10E-52 | -1.69E-46 |
| MS.gene058159 | MS.gene54090 | 0.800278 | 1.55E-48 | -1.69E-46 |
| MS.gene058498 | MS.gene54090 | 0.827311 | 1.68E-54 | -1.69E-46 |
| MS.gene058500 | MS.gene54090 | 0.839148 | 1.88E-57 | -1.69E-46 |
| MS.gene058625 | MS.gene54090 | 0.828656 | 7.96E-55 | -1.69E-46 |
| MS.gene058897 | MS.gene54090 | 0.80551 | 1.29E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene54090 | 0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene54090 | -0.827773 | 1.30E-54 | -1.69E-46 |
| MS.gene059935 | MS.gene54090 | 0.822656 | 2.11E-53 | -1.69E-46 |
| MS.gene060012 | MS.gene54090 | 0.801443 | 8.98E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene54090 | 0.813659 | 2.29E-51 | -1.69E-46 |
| MS.gene060879 | MS.gene54090 | 0.81733 | 3.49E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene54090 | 0.818991 | 1.47E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene54090 | 0.826779 | 2.25E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54090.t1 | MTR_1g010090 | 94.652 | 748 | 36 | 2 | 129 | 876 | 1 | 744 | 0.0 | 1175 |
| MS.gene54090.t1 | MTR_1g010100 | 100.000 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 3.35e-74 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54090.t1 | AT3G49601 | 56.250 | 208 | 75 | 4 | 1 | 202 | 1 | 198 | 2.16e-55 | 202 |
Find 250 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTAGCCTTTACCTTTAC+TGG | 0.130821 | 1.2:-10068751 | None:intergenic |
| TTGAGGGATGAAGACGATTT+TGG | 0.202781 | 1.2:+10070200 | MS.gene54090:CDS |
| GAAATGATAATGATTATAAA+AGG | 0.232978 | 1.2:+10069574 | MS.gene54090:CDS |
| CAAGAGATGGAAAGCATAAA+AGG | 0.234081 | 1.2:+10069646 | MS.gene54090:CDS |
| CTGTCATTTATTTCCTCCTT+TGG | 0.263768 | 1.2:-10069135 | None:intergenic |
| ATAGAGATAGAGATAGAGAT+AGG | 0.300830 | 1.2:+10069301 | MS.gene54090:CDS |
| TTGAGGGATGGGGATGATTA+TGG | 0.306717 | 1.2:+10069843 | MS.gene54090:CDS |
| ATTGTTTGACTTCTAGAATC+TGG | 0.313643 | 1.2:-10069249 | None:intergenic |
| CATTGGTACCAGACCCTCTT+GGG | 0.314345 | 1.2:-10066478 | None:intergenic |
| GACAAGACAAACATGTTAAA+AGG | 0.325484 | 1.2:+10068998 | MS.gene54090:CDS |
| ACTGAAATCTCTGTCCAAAA+AGG | 0.326245 | 1.2:-10068374 | None:intergenic |
| TTTCCTTTCTAGCAGCAATT+TGG | 0.327828 | 1.2:-10068207 | None:intergenic |
| TCTAGGGATGGGGATGATTA+TGG | 0.332132 | 1.2:+10070023 | MS.gene54090:CDS |
| ATGAAGAAAGGAAGAACTTA+AGG | 0.338628 | 1.2:+10069970 | MS.gene54090:CDS |
| ATGGAGAAAGAAAGAGCTTA+AGG | 0.341025 | 1.2:+10070042 | MS.gene54090:CDS |
| TTGGAGAAAGAAAGCACTTA+AGG | 0.349814 | 1.2:+10070219 | MS.gene54090:CDS |
| TTAGAGAAACAAAGATTAGA+AGG | 0.350459 | 1.2:+10070147 | MS.gene54090:CDS |
| ATGGAGAAAGAAAGAACTTA+AGG | 0.352771 | 1.2:+10069862 | MS.gene54090:CDS |
| TCAGCTGAATCTGCCGCTTT+CGG | 0.354578 | 1.2:-10066634 | None:intergenic |
| GAGAAAGAAGGCATTATAGA+AGG | 0.355736 | 1.2:+10070528 | MS.gene54090:CDS |
| AACAATATGTACAACGGAAT+CGG | 0.356790 | 1.2:+10066446 | None:intergenic |
| AGTAGCAGTGATAGTGAAAC+TGG | 0.362833 | 1.2:+10069045 | MS.gene54090:CDS |
| TGAAAACGATGGATCCAATA+TGG | 0.363035 | 1.2:+10066760 | MS.gene54090:CDS |
| TTGAGTTCTTTCTTTCTTTG+CGG | 0.366491 | 1.2:-10070361 | None:intergenic |
| AAACACTCACTTATCCATAT+TGG | 0.373034 | 1.2:-10066774 | None:intergenic |
| ATCATCCTTGTACTTTCTCT+TGG | 0.374078 | 1.2:-10068488 | None:intergenic |
| AGAGAGGCAGAAATTATAAC+AGG | 0.378338 | 1.2:+10069481 | MS.gene54090:CDS |
| GATGGACAAGATAGGAAGTT+TGG | 0.385688 | 1.2:+10069348 | MS.gene54090:CDS |
| TGAAGATAAGCTGATTGATC+AGG | 0.385864 | 1.2:+10066670 | MS.gene54090:CDS |
| TCATCCTTGTACTTTCTCTT+GGG | 0.389930 | 1.2:-10068487 | None:intergenic |
| TCAGCAACCTTCGAAGTTCT+CGG | 0.393476 | 1.2:-10066533 | None:intergenic |
| GGCAGTGTTAGGCATGCTTC+AGG | 0.402014 | 1.2:+10068976 | MS.gene54090:CDS |
| GATTCTTTAAGAAAATCATA+TGG | 0.409706 | 1.2:+10069207 | MS.gene54090:CDS |
| TATGGAAGAACTAGAAAAGT+TGG | 0.411014 | 1.2:+10069090 | MS.gene54090:CDS |
| TGGAGAAAGAAAGCACTTAA+GGG | 0.413260 | 1.2:+10070220 | MS.gene54090:CDS |
| AGAGGTAATGCTGCAGGAAA+AGG | 0.422438 | 1.2:+10069156 | MS.gene54090:CDS |
| TTTCAGTCGGAAGAAACAAT+TGG | 0.425008 | 1.2:+10068390 | MS.gene54090:CDS |
| TGAAAATATGAAGGGGTTTG+AGG | 0.438018 | 1.2:+10066553 | MS.gene54090:CDS |
| AGAAAGAGCTTAAGGGATGA+GGG | 0.439138 | 1.2:+10070050 | MS.gene54090:CDS |
| TGGAGAAAGAAAGAGCTTAA+GGG | 0.439219 | 1.2:+10070043 | MS.gene54090:CDS |
| GAAGGAAGACCTTGAGGGAT+GGG | 0.445522 | 1.2:+10069832 | MS.gene54090:CDS |
| TTGGACGAATTGATCGGAAT+AGG | 0.455169 | 1.2:+10069523 | MS.gene54090:CDS |
| GAAAATATGAAGGGGTTTGA+GGG | 0.457175 | 1.2:+10066554 | MS.gene54090:CDS |
| CCATTGGTACCAGACCCTCT+TGG | 0.460535 | 1.2:-10066479 | None:intergenic |
| TCACCAAATTGCTGCTAGAA+AGG | 0.462437 | 1.2:+10068204 | MS.gene54090:CDS |
| CCCTAGAGTTCTTCTCTCCT+CGG | 0.463301 | 1.2:-10070112 | None:intergenic |
| CTAAGCACCGCAAGAAAGGC+AGG | 0.463539 | 1.2:+10068653 | MS.gene54090:CDS |
| GGGATGATGATCGTGGAGAA+AGG | 0.464631 | 1.2:+10070549 | MS.gene54090:CDS |
| AACAAAGATTAGAAGGATTG+AGG | 0.471892 | 1.2:+10070154 | MS.gene54090:CDS |
| ACAATATGTACAACGGAATC+GGG | 0.472478 | 1.2:+10066447 | None:intergenic |
| AAGAAAGAGCTTAAGGGATG+AGG | 0.473531 | 1.2:+10070049 | MS.gene54090:CDS |
| TGGAGAAAGAAAGAACTTAA+GGG | 0.474386 | 1.2:+10069863 | MS.gene54090:CDS |
| AGAAAAGGAGCTCTAGGGAT+GGG | 0.475231 | 1.2:+10070012 | MS.gene54090:CDS |
| AATACAGATGGGAATGATGA+AGG | 0.476248 | 1.2:+10068286 | MS.gene54090:CDS |
| TAGTGCCAAGGTTGATGGAT+TGG | 0.477705 | 1.2:+10069185 | MS.gene54090:CDS |
| AAGAAAGAACTTAAGGGATG+AGG | 0.478065 | 1.2:+10069869 | MS.gene54090:CDS |
| AGTACGGATGATGAGAAAAC+AGG | 0.480046 | 1.2:+10068529 | MS.gene54090:CDS |
| AGAAAGAACTTAAGGGATGA+GGG | 0.480455 | 1.2:+10069870 | MS.gene54090:CDS |
| TGAAGAGGCGAGGAATAACT+TGG | 0.480606 | 1.2:+10066724 | MS.gene54090:CDS |
| AATGAAGATGATTCAAGAGA+TGG | 0.482878 | 1.2:+10069633 | MS.gene54090:CDS |
| TTAAGGGATGAGGGTGGCAG+AGG | 0.484214 | 1.2:+10070059 | MS.gene54090:CDS |
| TGAAGAAAGGAAGAACTTAA+GGG | 0.484449 | 1.2:+10069971 | MS.gene54090:CDS |
| GTGGAGAGAAAAGGAGCTCT+AGG | 0.485273 | 1.2:+10070006 | MS.gene54090:CDS |
| TGGACGAATTGATCGGAATA+GGG | 0.486136 | 1.2:+10069524 | MS.gene54090:CDS |
| GAAACATTGAAAGCTGCTCT+TGG | 0.486237 | 1.2:+10068238 | MS.gene54090:CDS |
| TAAAGGTAAAGGCTAGTAAG+AGG | 0.487578 | 1.2:+10068755 | MS.gene54090:CDS |
| TAGAAGTCAAACAATAGCTA+AGG | 0.489116 | 1.2:+10069257 | MS.gene54090:CDS |
| ATTCTTTAAGAAAATCATAT+GGG | 0.491036 | 1.2:+10069208 | MS.gene54090:CDS |
| AATAAAGAACTCTAGGTATG+AGG | 0.492130 | 1.2:+10070298 | MS.gene54090:CDS |
| GCTGATGAATTAAATACAGA+TGG | 0.493661 | 1.2:+10068274 | MS.gene54090:CDS |
| ACTCTGGTAGAGGCAGTGTT+AGG | 0.494351 | 1.2:+10068965 | MS.gene54090:CDS |
| ATGATGAGAAAACAGGTAGA+AGG | 0.494540 | 1.2:+10068536 | MS.gene54090:CDS |
| AAGGATGAAGATTATCCTAC+AGG | 0.494644 | 1.2:+10069738 | MS.gene54090:CDS |
| GTGGAGAAAGGAAGCACAGA+AGG | 0.495191 | 1.2:+10070561 | MS.gene54090:CDS |
| TCTAAATCAGCTAGGATCAG+AGG | 0.496676 | 1.2:+10069435 | MS.gene54090:CDS |
| TAGAGAAAGAAAGAACTCTC+TGG | 0.497810 | 1.2:+10069899 | MS.gene54090:CDS |
| GAGGGAGATCAAGGTACTGC+TGG | 0.500186 | 1.2:+10066572 | MS.gene54090:CDS |
| TTAAGGGATGGCAATGGCCG+TGG | 0.501216 | 1.2:+10069987 | MS.gene54090:CDS |
| CTAAGCATGATGGACAAGAT+AGG | 0.501729 | 1.2:+10069340 | MS.gene54090:CDS |
| ATCATCATGAAGGCGTGCCC+AGG | 0.502347 | 1.2:+10068800 | MS.gene54090:CDS |
| AAATGATAATGATTATAAAA+GGG | 0.503477 | 1.2:+10069575 | MS.gene54090:CDS |
| CACTTCACTAGTCCTACGCC+TGG | 0.504019 | 1.2:-10068818 | None:intergenic |
| TTACAAACCCCAAGAGGGTC+TGG | 0.504419 | 1.2:+10066470 | MS.gene54090:CDS |
| AAGAAAGATCAGAAGGATTG+AGG | 0.504787 | 1.2:+10069797 | MS.gene54090:CDS |
| GGTTCTATTGATGCGGACTC+TGG | 0.504835 | 1.2:+10068949 | MS.gene54090:CDS |
| GTCAAATATGCTAAGCATGA+TGG | 0.504928 | 1.2:+10069330 | MS.gene54090:CDS |
| TCTCGGGATGGTGATGGCCG+AGG | 0.505947 | 1.2:+10070095 | MS.gene54090:CDS |
| TACAGGAAGAAAGCACTTGA+GGG | 0.506535 | 1.2:+10069755 | MS.gene54090:CDS |
| AGAAAAGAAGCTCTAGAGAT+GGG | 0.507069 | 1.2:+10069940 | MS.gene54090:CDS |
| ATGGGGATGATTATGAAGAA+AGG | 0.507837 | 1.2:+10069958 | MS.gene54090:CDS |
| TAATGATTATAAAAGGGATC+AGG | 0.509329 | 1.2:+10069581 | MS.gene54090:CDS |
| AAGGAAGACCTTGAGGGATG+GGG | 0.513937 | 1.2:+10069833 | MS.gene54090:CDS |
| AGAGAAGAACTCTAGGGATG+TGG | 0.515242 | 1.2:+10070118 | MS.gene54090:CDS |
| GAAGGTTGCTGAAAATATGA+AGG | 0.515977 | 1.2:+10066544 | MS.gene54090:CDS |
| GTGTAGAAATAAAGAACTCT+AGG | 0.518740 | 1.2:+10070291 | MS.gene54090:CDS |
| TAGAGATAGAGATAGAGATA+GGG | 0.520061 | 1.2:+10069302 | MS.gene54090:CDS |
| ATGGAAGAACTAGAAAAGTT+GGG | 0.521877 | 1.2:+10069091 | MS.gene54090:CDS |
| ATACAGATGGGAATGATGAA+GGG | 0.522361 | 1.2:+10068287 | MS.gene54090:CDS |
| TGGGAGTTCCACCCTTCTTG+TGG | 0.522378 | 1.2:-10068468 | None:intergenic |
| AAGAGATGGAAAGCATAAAA+GGG | 0.524413 | 1.2:+10069647 | MS.gene54090:CDS |
| GCCGAGGAGAGAAGAACTCT+AGG | 0.524654 | 1.2:+10070111 | MS.gene54090:CDS |
| TACTGCTGGTGTTAGTAGAA+AGG | 0.524874 | 1.2:+10066586 | MS.gene54090:CDS |
| GAGAAAAGAAGCTCTAGAGA+TGG | 0.525335 | 1.2:+10069939 | MS.gene54090:CDS |
| AAGGGGTTTGAGGGAGATCA+AGG | 0.526411 | 1.2:+10066563 | MS.gene54090:CDS |
| GATGGGAATGATGAAGGGGC+TGG | 0.527895 | 1.2:+10068292 | MS.gene54090:CDS |
| GGATTATGAAACAAGAAGGA+AGG | 0.531442 | 1.2:+10069548 | MS.gene54090:CDS |
| GAGAAAGAGCTCAAGGGATG+AGG | 0.531478 | 1.2:+10070406 | MS.gene54090:CDS |
| AATGACAGAGGTAATGCTGC+AGG | 0.531486 | 1.2:+10069150 | MS.gene54090:CDS |
| GATGTTGAATCACAATCTGT+TGG | 0.531914 | 1.2:+10069504 | MS.gene54090:CDS |
| AGAAAGAAGGCATTATAGAA+GGG | 0.532131 | 1.2:+10070529 | MS.gene54090:CDS |
| ACATCTAAGCACCGCAAGAA+AGG | 0.532339 | 1.2:+10068649 | MS.gene54090:CDS |
| GGAAGGAAGACCTTGAGGGA+TGG | 0.533795 | 1.2:+10069831 | MS.gene54090:CDS |
| AAGCAGAAAACAAGGAGGTA+TGG | 0.536579 | 1.2:+10068928 | MS.gene54090:CDS |
| ATTGATGCGGACTCTGGTAG+AGG | 0.536751 | 1.2:+10068955 | MS.gene54090:CDS |
| GAGGTAATGCTGCAGGAAAA+GGG | 0.538469 | 1.2:+10069157 | MS.gene54090:CDS |
| GAGGAGAAAGAAAGAACTCT+CGG | 0.539758 | 1.2:+10070078 | MS.gene54090:CDS |
| AGAGGGGATGATGAGTATCA+TGG | 0.540257 | 1.2:+10070452 | MS.gene54090:CDS |
| ATCAGCGTCAGATTCCTCTT+CGG | 0.541730 | 1.2:-10068875 | None:intergenic |
| CCAAGAGGGTCTGGTACCAA+TGG | 0.542448 | 1.2:+10066479 | MS.gene54090:CDS |
| AAGGAAGAACTCAAGGGAAG+AGG | 0.544319 | 1.2:+10070334 | MS.gene54090:CDS |
| AAGAAAGCACTTAAGGGATG+AGG | 0.545463 | 1.2:+10070226 | MS.gene54090:CDS |
| GGGAGGATTATGAAACAAGA+AGG | 0.546874 | 1.2:+10069544 | MS.gene54090:CDS |
| CAAGAGGGTCTGGTACCAAT+GGG | 0.547119 | 1.2:+10066480 | MS.gene54090:CDS |
| ACAGAGAGAGAAAGAGCTCA+AGG | 0.548074 | 1.2:+10070399 | MS.gene54090:CDS |
| AGACACAAAGCGCCACAAGA+AGG | 0.549305 | 1.2:+10068456 | MS.gene54090:CDS |
| AAGGAAGCACAGAAGGGAGT+AGG | 0.549615 | 1.2:+10070568 | MS.gene54090:CDS |
| GACACAAAGCGCCACAAGAA+GGG | 0.550002 | 1.2:+10068457 | MS.gene54090:CDS |
| GAGAAAAGGAGCTCTAGGGA+TGG | 0.550005 | 1.2:+10070011 | MS.gene54090:CDS |
| ATGGAGAAAGAAAGCGCAGA+AGG | 0.550445 | 1.2:+10070471 | MS.gene54090:CDS |
| GAAAAGGAGCTCTAGGGATG+GGG | 0.552267 | 1.2:+10070013 | MS.gene54090:CDS |
| AGTGATAGTGATCGCAGGTA+TGG | 0.552398 | 1.2:+10069072 | MS.gene54090:CDS |
| CATCCACCCTGCCTTTCTTG+CGG | 0.553444 | 1.2:-10068660 | None:intergenic |
| TGCAGGAAGGAAGACCTTGA+GGG | 0.553552 | 1.2:+10069827 | MS.gene54090:CDS |
| GCAAAGAAAGAAAGAACTCA+AGG | 0.557129 | 1.2:+10070363 | MS.gene54090:CDS |
| GAAGCACAAAACAGAAGGGA+TGG | 0.557465 | 1.2:+10070260 | MS.gene54090:CDS |
| TACAGGAAGAAAGACCTTGA+GGG | 0.558041 | 1.2:+10070184 | MS.gene54090:CDS |
| CTAAATCAGCTAGGATCAGA+GGG | 0.558128 | 1.2:+10069436 | MS.gene54090:CDS |
| GATGAAGGGGCTGGAAACGA+AGG | 0.559192 | 1.2:+10068301 | MS.gene54090:CDS |
| GCAAAGAAAGGAAGAACTCA+AGG | 0.561372 | 1.2:+10070327 | MS.gene54090:CDS |
| AGGATTGAGGATGATCGTAC+AGG | 0.562091 | 1.2:+10070167 | MS.gene54090:CDS |
| AAGGGACGAGGAAGACCGCC+GGG | 0.562414 | 1.2:+10069665 | MS.gene54090:CDS |
| ATAGAGAAGCACAAAACAGA+AGG | 0.562661 | 1.2:+10070255 | MS.gene54090:CDS |
| CTACAGGAAGAAAGCACTTG+AGG | 0.564894 | 1.2:+10069754 | MS.gene54090:CDS |
| AGAATCCAATCCATCAACCT+TGG | 0.565326 | 1.2:-10069190 | None:intergenic |
| ATGAGGATGATCGCAAAGAA+AGG | 0.565805 | 1.2:+10070315 | MS.gene54090:CDS |
| ATGAAGGCGTGCCCAGGCGT+AGG | 0.565815 | 1.2:+10068806 | MS.gene54090:CDS |
| GAAGATAAGCTGATTGATCA+GGG | 0.567835 | 1.2:+10066671 | MS.gene54090:CDS |
| GAGAAGAACTCTAGGGATGT+GGG | 0.569850 | 1.2:+10070119 | MS.gene54090:CDS |
| AAGGTTGCTGAAAATATGAA+GGG | 0.570610 | 1.2:+10066545 | MS.gene54090:CDS |
| AAGAACTCTCGGGATGGTGA+TGG | 0.570968 | 1.2:+10070089 | MS.gene54090:CDS |
| TTCTTGAGCATGACCGAAAG+CGG | 0.571093 | 1.2:+10066621 | MS.gene54090:CDS |
| CGTGAAGCCGAGAACTTCGA+AGG | 0.571228 | 1.2:+10066526 | MS.gene54090:CDS |
| CAGTCGGAAGAAACAATTGG+AGG | 0.572032 | 1.2:+10068393 | MS.gene54090:CDS |
| GATTATGAAACAAGAAGGAA+GGG | 0.574761 | 1.2:+10069549 | MS.gene54090:CDS |
| AAAGGGACGAGGAAGACCGC+CGG | 0.575454 | 1.2:+10069664 | MS.gene54090:CDS |
| AGGATTGAGGATGAACGTGC+AGG | 0.578381 | 1.2:+10069810 | MS.gene54090:CDS |
| AAGCACAAAACAGAAGGGAT+GGG | 0.579129 | 1.2:+10070261 | MS.gene54090:CDS |
| TATGGGAGAGATTATAAAGA+GGG | 0.582883 | 1.2:+10069225 | MS.gene54090:CDS |
| ATTCTGATAGTGATGCTAAG+AGG | 0.583073 | 1.2:+10068599 | MS.gene54090:CDS |
| TCAAGGGATGAGGATGTTCG+TGG | 0.583178 | 1.2:+10070416 | MS.gene54090:CDS |
| GCAATGGCCGTGGAGAGAAA+AGG | 0.583518 | 1.2:+10069997 | MS.gene54090:CDS |
| TGGAGAGAGAAGGCATGGAA+AGG | 0.586417 | 1.2:+10069719 | MS.gene54090:CDS |
| GTGGGGAAAGAAAGCACAGA+GGG | 0.586721 | 1.2:+10070435 | MS.gene54090:CDS |
| ACGGAGAAAGAAAGATCAGA+AGG | 0.587778 | 1.2:+10069790 | MS.gene54090:CDS |
| GGTCGTGGAGAGAGAAGGCA+TGG | 0.587909 | 1.2:+10069714 | MS.gene54090:CDS |
| CTGATGAATTAAATACAGAT+GGG | 0.590577 | 1.2:+10068275 | MS.gene54090:CDS |
| ATGGTTATTCTAAATCAGCT+AGG | 0.591198 | 1.2:+10069427 | MS.gene54090:CDS |
| CAAGGGATGAGGATGTTCGT+GGG | 0.591261 | 1.2:+10070417 | MS.gene54090:CDS |
| AATGAAAATGAAGAAAGAGA+TGG | 0.593131 | 1.2:+10069408 | MS.gene54090:CDS |
| ATCAGATTCATCACTACTGT+CGG | 0.593798 | 1.2:-10068578 | None:intergenic |
| TACAGATGGGAATGATGAAG+GGG | 0.594685 | 1.2:+10068288 | MS.gene54090:CDS |
| AGAAGTCAAACAATAGCTAA+GGG | 0.595420 | 1.2:+10069258 | MS.gene54090:CDS |
| AGCGAAGAGAAGTGAGCCAA+AGG | 0.596644 | 1.2:+10069119 | MS.gene54090:CDS |
| AGTAAGAGGCATGATTCAGA+TGG | 0.597582 | 1.2:+10068769 | MS.gene54090:CDS |
| TTATACTGAGGCTGAGATTG+CGG | 0.598508 | 1.2:+10066694 | MS.gene54090:CDS |
| TGGAGAGAAAAGGAGCTCTA+GGG | 0.599906 | 1.2:+10070007 | MS.gene54090:CDS |
| GACTTGAGAAGCAGAAAACA+AGG | 0.600148 | 1.2:+10068920 | MS.gene54090:CDS |
| TCTCTGGATGGCGATGTCCG+TGG | 0.600862 | 1.2:+10069915 | MS.gene54090:CDS |
| AGGAGAAAGAAAGAACTCTC+GGG | 0.601526 | 1.2:+10070079 | MS.gene54090:CDS |
| AGCACAAAACAGAAGGGATG+GGG | 0.601555 | 1.2:+10070262 | MS.gene54090:CDS |
| TGATTTCTCTTCTGATAGTG+AGG | 0.602201 | 1.2:+10068696 | MS.gene54090:CDS |
| CCGAGGAGAGAAGAACTCTA+GGG | 0.602298 | 1.2:+10070112 | MS.gene54090:CDS |
| ATAATCATCCCCATCCCTCA+AGG | 0.602864 | 1.2:-10069841 | None:intergenic |
| CGGAGAAGCTTGAAGAGGCG+AGG | 0.603883 | 1.2:+10066714 | MS.gene54090:CDS |
| GTAAGAGACGAAGATGGTCG+TGG | 0.605174 | 1.2:+10069699 | MS.gene54090:CDS |
| CAAAGAAAGAAAGAACTCAA+GGG | 0.606961 | 1.2:+10070364 | MS.gene54090:CDS |
| ACAAAGCGCCACAAGAAGGG+TGG | 0.608610 | 1.2:+10068460 | MS.gene54090:CDS |
| ATTGGTACCAGACCCTCTTG+GGG | 0.610172 | 1.2:-10066477 | None:intergenic |
| GGAGATTCTGATCATCATGA+AGG | 0.612338 | 1.2:+10068790 | MS.gene54090:CDS |
| AGAAAGCACTTAAGGGATGA+GGG | 0.614396 | 1.2:+10070227 | MS.gene54090:CDS |
| GGAATCTGACGCTGATAGTG+AGG | 0.617906 | 1.2:+10068882 | MS.gene54090:CDS |
| ATGATGGTCATGGAGAAAGA+AGG | 0.618260 | 1.2:+10070516 | MS.gene54090:CDS |
| GAAAGGAAGAACTTAAGGGA+TGG | 0.618658 | 1.2:+10069975 | MS.gene54090:CDS |
| AATCTGTTGGACGAATTGAT+CGG | 0.619988 | 1.2:+10069517 | MS.gene54090:CDS |
| AACTCCCAAGAGAAAGTACA+AGG | 0.620318 | 1.2:+10068483 | MS.gene54090:CDS |
| AAAAGCGTAAGAGACGAAGA+TGG | 0.622517 | 1.2:+10069693 | MS.gene54090:CDS |
| AAAATCGTCTTCATCCCTCA+AGG | 0.623427 | 1.2:-10070198 | None:intergenic |
| GTGCAGGAAGGAAGACCTTG+AGG | 0.624100 | 1.2:+10069826 | MS.gene54090:CDS |
| ATCTGATTCAGATAGCAGTA+CGG | 0.625946 | 1.2:+10068513 | MS.gene54090:CDS |
| TGATAGTGATGCTAAGAGGA+AGG | 0.626197 | 1.2:+10068603 | MS.gene54090:CDS |
| CTCAAGTGCTTTCTTCCTGT+AGG | 0.626993 | 1.2:-10069753 | None:intergenic |
| TTGAGGATGAACGTGCAGGA+AGG | 0.627354 | 1.2:+10069814 | MS.gene54090:CDS |
| CAGAGAGAGAAAGAGCTCAA+GGG | 0.628373 | 1.2:+10070400 | MS.gene54090:CDS |
| ATCACTGCTACTCTCATCAG+AGG | 0.629147 | 1.2:-10069034 | None:intergenic |
| GCAGCAGTGATAGTGATCGC+AGG | 0.630849 | 1.2:+10069067 | MS.gene54090:CDS |
| GAGGTATGGTTCTATTGATG+CGG | 0.631389 | 1.2:+10068942 | MS.gene54090:CDS |
| GAAAAGAAGCTCTAGAGATG+GGG | 0.631448 | 1.2:+10069941 | MS.gene54090:CDS |
| TGGAGAAAGGAAGCACAGAA+GGG | 0.632562 | 1.2:+10070562 | MS.gene54090:CDS |
| GTTGCTTTGAATGTACCCAT+TGG | 0.633884 | 1.2:-10066495 | None:intergenic |
| GAAAGAAAGAACTCTCTGGA+TGG | 0.633995 | 1.2:+10069903 | MS.gene54090:CDS |
| ATGAAGGGGCTGGAAACGAA+GGG | 0.636206 | 1.2:+10068302 | MS.gene54090:CDS |
| ATATGGGAGAGATTATAAAG+AGG | 0.636317 | 1.2:+10069224 | MS.gene54090:CDS |
| ACTTCACTAGTCCTACGCCT+GGG | 0.636349 | 1.2:-10068817 | None:intergenic |
| CAAAACAGAAGGGATGGGGA+TGG | 0.637014 | 1.2:+10070266 | MS.gene54090:CDS |
| TATAGAAGGGATGATGATCG+TGG | 0.640097 | 1.2:+10070542 | MS.gene54090:CDS |
| GTAGGACTAGTGAAGTGAAG+AGG | 0.641552 | 1.2:+10068824 | MS.gene54090:CDS |
| TTGAGGGATGAAGATGATCA+CGG | 0.641692 | 1.2:+10069771 | MS.gene54090:CDS |
| ATCGGGTTACAAACCCCAAG+AGG | 0.642712 | 1.2:+10066464 | MS.gene54090:CDS |
| TGATGCTAAGAGGAAGGTCA+AGG | 0.643266 | 1.2:+10068609 | MS.gene54090:CDS |
| AAGATGGTCGTGGAGAGAGA+AGG | 0.643561 | 1.2:+10069709 | MS.gene54090:CDS |
| AGAGGCGAGGAATAACTTGG+AGG | 0.647831 | 1.2:+10066727 | MS.gene54090:CDS |
| TAGAGAAGCACAAAACAGAA+GGG | 0.648296 | 1.2:+10070256 | MS.gene54090:CDS |
| CAAACGTCATGATTCCGAAG+AGG | 0.649598 | 1.2:+10068861 | MS.gene54090:CDS |
| GTACAGGAAGAAAGACCTTG+AGG | 0.650077 | 1.2:+10070183 | MS.gene54090:CDS |
| TGGAGAAAGAAAGCGCAGAA+GGG | 0.654591 | 1.2:+10070472 | MS.gene54090:CDS |
| GAAAGAAAGAACTCTCGGGA+TGG | 0.661874 | 1.2:+10070083 | MS.gene54090:CDS |
| GCTGCAGCTGATGAAAACGA+TGG | 0.664817 | 1.2:+10066749 | MS.gene54090:CDS |
| TGGAAAGCATAAAAGGGACG+AGG | 0.666249 | 1.2:+10069653 | MS.gene54090:CDS |
| ACGAATTGATCGGAATAGGG+AGG | 0.666293 | 1.2:+10069527 | MS.gene54090:CDS |
| CAAAGAAAGGAAGAACTCAA+GGG | 0.668656 | 1.2:+10070328 | MS.gene54090:CDS |
| GTCGCGAACAATATGTACAA+CGG | 0.669321 | 1.2:+10066440 | None:intergenic |
| AAGGGATGAGGATGTTCGTG+GGG | 0.670207 | 1.2:+10070418 | MS.gene54090:CDS |
| GATTGCGGAGAAGCTTGAAG+AGG | 0.675067 | 1.2:+10066709 | MS.gene54090:CDS |
| AAGAGCTTAAGGGATGAGGG+TGG | 0.676066 | 1.2:+10070053 | MS.gene54090:CDS |
| TCGGGTTACAAACCCCAAGA+GGG | 0.677908 | 1.2:+10066465 | MS.gene54090:CDS |
| AGGTTGCTGAAAATATGAAG+GGG | 0.679407 | 1.2:+10066546 | MS.gene54090:CDS |
| TAAGCACCGCAAGAAAGGCA+GGG | 0.680248 | 1.2:+10068654 | MS.gene54090:CDS |
| AAGAACTTAAGGGATGGCAA+TGG | 0.685392 | 1.2:+10069981 | MS.gene54090:CDS |
| GAAGAGAAGTGAGCCAAAGG+AGG | 0.686174 | 1.2:+10069122 | MS.gene54090:CDS |
| GATAGTGAGGAAGAGAAACA+TGG | 0.691643 | 1.2:+10068895 | MS.gene54090:CDS |
| AAGGAGGAAATAAATGACAG+AGG | 0.696476 | 1.2:+10069138 | MS.gene54090:CDS |
| AAGACAAACATGTTAAAAGG+CGG | 0.697682 | 1.2:+10069001 | MS.gene54090:CDS |
| GCACCGCAAGAAAGGCAGGG+TGG | 0.701049 | 1.2:+10068657 | MS.gene54090:CDS |
| GATTGATCAGGGTTATACTG+AGG | 0.707882 | 1.2:+10066682 | MS.gene54090:CDS |
| AATGAAACTTCTGATCAGAG+AGG | 0.718112 | 1.2:+10069465 | MS.gene54090:CDS |
| GAGAGGCAGAAATTATAACA+GGG | 0.720186 | 1.2:+10069482 | MS.gene54090:CDS |
| TTGAGAAGCAGAAAACAAGG+AGG | 0.732407 | 1.2:+10068923 | MS.gene54090:CDS |
| AAGAACTTAAGGGATGAGGG+TGG | 0.740111 | 1.2:+10069873 | MS.gene54090:CDS |
| TGGGGAAAGAAAGCACAGAG+GGG | 0.758387 | 1.2:+10070436 | MS.gene54090:CDS |
| CGTGGGGAAAGAAAGCACAG+AGG | 0.779210 | 1.2:+10070434 | MS.gene54090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGATAATGATTATAAAA+GGG | + | chr1.2:10069575-10069594 | MS.gene54090:CDS | 10.0% |
| !! | ATCATTAACAAAAACTTATA+TGG | + | chr1.2:10068154-10068173 | MS.gene54090:intron | 15.0% |
| !! | ATTCACAAAAAAAAATAGTT+AGG | - | chr1.2:10068108-10068127 | None:intergenic | 15.0% |
| !! | TTAAATTATTATTGGTATCA+AGG | - | chr1.2:10067081-10067100 | None:intergenic | 15.0% |
| !! | TTCACAAAAAAAAATAGTTA+GGG | - | chr1.2:10068107-10068126 | None:intergenic | 15.0% |
| !!! | ATATTTCAGATATTTTTTCA+TGG | - | chr1.2:10068039-10068058 | None:intergenic | 15.0% |
| !!! | ATTCTTTAAGAAAATCATAT+GGG | + | chr1.2:10069208-10069227 | MS.gene54090:CDS | 15.0% |
| !!! | GAAATGATAATGATTATAAA+AGG | + | chr1.2:10069574-10069593 | MS.gene54090:CDS | 15.0% |
| !!! | TATAAGTATTTAGAACATAT+TGG | - | chr1.2:10067988-10068007 | None:intergenic | 15.0% |
| !! | AAGTAATAAAAAACCAGTAA+AGG | + | chr1.2:10068738-10068757 | MS.gene54090:CDS | 20.0% |
| !! | GAAAAAGAAAAAGAAAAAAC+AGG | - | chr1.2:10067960-10067979 | None:intergenic | 20.0% |
| !! | TAAAAGAACATCATGATTAA+TGG | - | chr1.2:10067860-10067879 | None:intergenic | 20.0% |
| !! | TAATGAATTAACTATTTCCA+CGG | + | chr1.2:10067751-10067770 | MS.gene54090:intron | 20.0% |
| !! | TCACAAAAAAAAATAGTTAG+GGG | - | chr1.2:10068106-10068125 | None:intergenic | 20.0% |
| !! | TTAAAATATTATTGGCATCA+AGG | - | chr1.2:10066944-10066963 | None:intergenic | 20.0% |
| !!! | AAAACTTATATGGAATTTTC+AGG | + | chr1.2:10068164-10068183 | MS.gene54090:intron | 20.0% |
| !!! | AGAGTTGATTCTTAAAAAAT+GGG | - | chr1.2:10067513-10067532 | None:intergenic | 20.0% |
| !!! | AGTTTTTGTTAATGATACTT+AGG | - | chr1.2:10068150-10068169 | None:intergenic | 20.0% |
| !!! | GATTCTTTAAGAAAATCATA+TGG | + | chr1.2:10069207-10069226 | MS.gene54090:CDS | 20.0% |
| !!! | TAAAAACGTGTTTTTTTTCA+GGG | + | chr1.2:10067446-10067465 | MS.gene54090:intron | 20.0% |
| !!! | TAGAGTTGATTCTTAAAAAA+TGG | - | chr1.2:10067514-10067533 | None:intergenic | 20.0% |
| !!! | TCAATTTGTATTTTTTAGAC+TGG | + | chr1.2:10067319-10067338 | MS.gene54090:intron | 20.0% |
| !!! | TGGCTTACTTTTTTTAAAAA+TGG | + | chr1.2:10067579-10067598 | MS.gene54090:intron | 20.0% |
| !!! | TTAAAAACGTGTTTTTTTTC+AGG | + | chr1.2:10067445-10067464 | MS.gene54090:intron | 20.0% |
| ! | AATGAAAATGAAGAAAGAGA+TGG | + | chr1.2:10069408-10069427 | MS.gene54090:CDS | 25.0% |
| ! | AATGAATTAACTATTTCCAC+GGG | + | chr1.2:10067752-10067771 | MS.gene54090:intron | 25.0% |
| ! | ACTCTTCTGACAAAAATTAT+TGG | + | chr1.2:10067775-10067794 | MS.gene54090:intron | 25.0% |
| ! | ATGATGAAAAAAAACATGGA+AGG | + | chr1.2:10069610-10069629 | MS.gene54090:CDS | 25.0% |
| ! | CTGATGAATTAAATACAGAT+GGG | + | chr1.2:10068275-10068294 | MS.gene54090:CDS | 25.0% |
| ! | GACAAAAAATATTGACATGT+TGG | + | chr1.2:10067284-10067303 | MS.gene54090:intron | 25.0% |
| ! | GACAAAAATTATTGGCATAT+TGG | + | chr1.2:10067783-10067802 | MS.gene54090:intron | 25.0% |
| ! | TAAAAAACCAGTAAAGGTAA+AGG | + | chr1.2:10068744-10068763 | MS.gene54090:CDS | 25.0% |
| ! | TAATGAATTAACTGTTTCCA+CGG | + | chr1.2:10067252-10067271 | MS.gene54090:intron | 25.0% |
| ! | TAATGATTATAAAAGGGATC+AGG | + | chr1.2:10069581-10069600 | MS.gene54090:CDS | 25.0% |
| ! | TTAGAGAAACAAAGATTAGA+AGG | + | chr1.2:10070147-10070166 | MS.gene54090:CDS | 25.0% |
| ! | TTATAAATGCAGTTACAGTA+AGG | + | chr1.2:10068074-10068093 | MS.gene54090:intron | 25.0% |
| !! | GCTTGAAAAAAGTGATTTTA+AGG | + | chr1.2:10067418-10067437 | MS.gene54090:intron | 25.0% |
| !!! | GATTATTTTAAGCTCTGTTT+GGG | - | chr1.2:10067931-10067950 | None:intergenic | 25.0% |
| !!! | TGATTATTTTAAGCTCTGTT+TGG | - | chr1.2:10067932-10067951 | None:intergenic | 25.0% |
| !!! | TTCCATGTTTTTTTTCATCA+TGG | - | chr1.2:10069611-10069630 | None:intergenic | 25.0% |
| !!! | TTTTTCAAGCTTAACCAAAT+GGG | - | chr1.2:10067408-10067427 | None:intergenic | 25.0% |
| !!! | TTTTTTCAAGCTTAACCAAA+TGG | - | chr1.2:10067409-10067428 | None:intergenic | 25.0% |
| AAACACTCACTTATCCATAT+TGG | - | chr1.2:10066777-10066796 | None:intergenic | 30.0% | |
| AACAAAGATTAGAAGGATTG+AGG | + | chr1.2:10070154-10070173 | MS.gene54090:CDS | 30.0% | |
| AAGACAAACATGTTAAAAGG+CGG | + | chr1.2:10069001-10069020 | MS.gene54090:CDS | 30.0% | |
| AAGGTTGCTGAAAATATGAA+GGG | + | chr1.2:10066545-10066564 | MS.gene54090:CDS | 30.0% | |
| AATAAAGAACTCTAGGTATG+AGG | + | chr1.2:10070298-10070317 | MS.gene54090:CDS | 30.0% | |
| AATGAAGATGATTCAAGAGA+TGG | + | chr1.2:10069633-10069652 | MS.gene54090:CDS | 30.0% | |
| AATGAATTAACTGTTTCCAC+GGG | + | chr1.2:10067253-10067272 | MS.gene54090:intron | 30.0% | |
| AGAAGTCAAACAATAGCTAA+GGG | + | chr1.2:10069258-10069277 | MS.gene54090:CDS | 30.0% | |
| ATAGAGATAGAGATAGAGAT+AGG | + | chr1.2:10069301-10069320 | MS.gene54090:CDS | 30.0% | |
| ATATGGGAGAGATTATAAAG+AGG | + | chr1.2:10069224-10069243 | MS.gene54090:CDS | 30.0% | |
| ATGAAGAAAGGAAGAACTTA+AGG | + | chr1.2:10069970-10069989 | MS.gene54090:CDS | 30.0% | |
| ATGCAATTAGACATAGTTTC+AGG | + | chr1.2:10067367-10067386 | MS.gene54090:intron | 30.0% | |
| ATGGAAGAACTAGAAAAGTT+GGG | + | chr1.2:10069091-10069110 | MS.gene54090:CDS | 30.0% | |
| ATGGAGAAAGAAAGAACTTA+AGG | + | chr1.2:10069862-10069881 | MS.gene54090:CDS | 30.0% | |
| ATGGTTATTCTAAATCAGCT+AGG | + | chr1.2:10069427-10069446 | MS.gene54090:CDS | 30.0% | |
| CAAAGAAAGAAAGAACTCAA+GGG | + | chr1.2:10070364-10070383 | MS.gene54090:CDS | 30.0% | |
| GACAAGACAAACATGTTAAA+AGG | + | chr1.2:10068998-10069017 | MS.gene54090:CDS | 30.0% | |
| GACCATGATGAAAAAAAACA+TGG | + | chr1.2:10069606-10069625 | MS.gene54090:CDS | 30.0% | |
| GATTATGAAACAAGAAGGAA+GGG | + | chr1.2:10069549-10069568 | MS.gene54090:CDS | 30.0% | |
| GCTGATGAATTAAATACAGA+TGG | + | chr1.2:10068274-10068293 | MS.gene54090:CDS | 30.0% | |
| GTGTAGAAATAAAGAACTCT+AGG | + | chr1.2:10070291-10070310 | MS.gene54090:CDS | 30.0% | |
| TAGAAGTCAAACAATAGCTA+AGG | + | chr1.2:10069257-10069276 | MS.gene54090:CDS | 30.0% | |
| TAGAGATAGAGATAGAGATA+GGG | + | chr1.2:10069302-10069321 | MS.gene54090:CDS | 30.0% | |
| TATGGAAGAACTAGAAAAGT+TGG | + | chr1.2:10069090-10069109 | MS.gene54090:CDS | 30.0% | |
| TATGGGAGAGATTATAAAGA+GGG | + | chr1.2:10069225-10069244 | MS.gene54090:CDS | 30.0% | |
| TGAAGAAAGGAAGAACTTAA+GGG | + | chr1.2:10069971-10069990 | MS.gene54090:CDS | 30.0% | |
| TGCAATTAGACATAGTTTCA+GGG | + | chr1.2:10067368-10067387 | MS.gene54090:intron | 30.0% | |
| TGGAGAAAGAAAGAACTTAA+GGG | + | chr1.2:10069863-10069882 | MS.gene54090:CDS | 30.0% | |
| TTGAGTTCTTTCTTTCTTTG+CGG | - | chr1.2:10070364-10070383 | None:intergenic | 30.0% | |
| ! | AAGAGATGGAAAGCATAAAA+GGG | + | chr1.2:10069647-10069666 | MS.gene54090:CDS | 30.0% |
| ! | ATATGGATAAGTGAGTGTTT+TGG | + | chr1.2:10066777-10066796 | MS.gene54090:intron | 30.0% |
| ! | ATTGTTGGTTAGCATGATAT+TGG | + | chr1.2:10066895-10066914 | MS.gene54090:intron | 30.0% |
| !! | AAGTGGTTAGTTTCATGTTA+GGG | + | chr1.2:10067207-10067226 | MS.gene54090:intron | 30.0% |
| !! | AGAAAGAAGGCATTATAGAA+GGG | + | chr1.2:10070529-10070548 | MS.gene54090:CDS | 30.0% |
| !! | AGTGGTTAGTTTCATATTAG+AGG | + | chr1.2:10067707-10067726 | MS.gene54090:intron | 30.0% |
| !! | ATTGTTTGACTTCTAGAATC+TGG | - | chr1.2:10069252-10069271 | None:intergenic | 30.0% |
| !! | TAAGTGGTTAGTTTCATGTT+AGG | + | chr1.2:10067206-10067225 | MS.gene54090:intron | 30.0% |
| !! | TGGATTTTGATAGTTGTGTT+AGG | + | chr1.2:10066797-10066816 | MS.gene54090:intron | 30.0% |
| AAAAATAGTGCCAAGGTTGA+TGG | + | chr1.2:10069180-10069199 | MS.gene54090:CDS | 35.0% | |
| AAAAGGGAAAAATAGTGCCA+AGG | + | chr1.2:10069173-10069192 | MS.gene54090:CDS | 35.0% | |
| AAGAAAGAACTTAAGGGATG+AGG | + | chr1.2:10069869-10069888 | MS.gene54090:CDS | 35.0% | |
| AAGAAAGATCAGAAGGATTG+AGG | + | chr1.2:10069797-10069816 | MS.gene54090:CDS | 35.0% | |
| AAGGAGGAAATAAATGACAG+AGG | + | chr1.2:10069138-10069157 | MS.gene54090:CDS | 35.0% | |
| AAGGATGAAGATTATCCTAC+AGG | + | chr1.2:10069738-10069757 | MS.gene54090:CDS | 35.0% | |
| AATACAGATGGGAATGATGA+AGG | + | chr1.2:10068286-10068305 | MS.gene54090:CDS | 35.0% | |
| AATCTGTTGGACGAATTGAT+CGG | + | chr1.2:10069517-10069536 | MS.gene54090:CDS | 35.0% | |
| AATGAAACTTCTGATCAGAG+AGG | + | chr1.2:10069465-10069484 | MS.gene54090:CDS | 35.0% | |
| ACTGAAATCTCTGTCCAAAA+AGG | - | chr1.2:10068377-10068396 | None:intergenic | 35.0% | |
| AGAAAGAACTTAAGGGATGA+GGG | + | chr1.2:10069870-10069889 | MS.gene54090:CDS | 35.0% | |
| AGAGAGGCAGAAATTATAAC+AGG | + | chr1.2:10069481-10069500 | MS.gene54090:CDS | 35.0% | |
| AGGTTGCTGAAAATATGAAG+GGG | + | chr1.2:10066546-10066565 | MS.gene54090:CDS | 35.0% | |
| ATACAGATGGGAATGATGAA+GGG | + | chr1.2:10068287-10068306 | MS.gene54090:CDS | 35.0% | |
| ATCAGATTCATCACTACTGT+CGG | - | chr1.2:10068581-10068600 | None:intergenic | 35.0% | |
| ATCATCCTTGTACTTTCTCT+TGG | - | chr1.2:10068491-10068510 | None:intergenic | 35.0% | |
| ATCTGATTCAGATAGCAGTA+CGG | + | chr1.2:10068513-10068532 | MS.gene54090:CDS | 35.0% | |
| ATGATGAGAAAACAGGTAGA+AGG | + | chr1.2:10068536-10068555 | MS.gene54090:CDS | 35.0% | |
| ATGGAGAAAGAAAGAGCTTA+AGG | + | chr1.2:10070042-10070061 | MS.gene54090:CDS | 35.0% | |
| ATGGGGATGATTATGAAGAA+AGG | + | chr1.2:10069958-10069977 | MS.gene54090:CDS | 35.0% | |
| ATGTTTAGATGGAGGGTTTA+GGG | + | chr1.2:10067551-10067570 | MS.gene54090:intron | 35.0% | |
| CAAAGAAAGGAAGAACTCAA+GGG | + | chr1.2:10070328-10070347 | MS.gene54090:CDS | 35.0% | |
| CAATTAGACATAGTTTCAGG+GGG | + | chr1.2:10067370-10067389 | MS.gene54090:intron | 35.0% | |
| GAAAATATGAAGGGGTTTGA+GGG | + | chr1.2:10066554-10066573 | MS.gene54090:CDS | 35.0% | |
| GAAGATAAGCTGATTGATCA+GGG | + | chr1.2:10066671-10066690 | MS.gene54090:CDS | 35.0% | |
| GAAGGTTGCTGAAAATATGA+AGG | + | chr1.2:10066544-10066563 | MS.gene54090:CDS | 35.0% | |
| GAGAGGCAGAAATTATAACA+GGG | + | chr1.2:10069482-10069501 | MS.gene54090:CDS | 35.0% | |
| GATGTTGAATCACAATCTGT+TGG | + | chr1.2:10069504-10069523 | MS.gene54090:CDS | 35.0% | |
| GCAAAGAAAGAAAGAACTCA+AGG | + | chr1.2:10070363-10070382 | MS.gene54090:CDS | 35.0% | |
| GCAATTAGACATAGTTTCAG+GGG | + | chr1.2:10067369-10067388 | MS.gene54090:intron | 35.0% | |
| GGATTATGAAACAAGAAGGA+AGG | + | chr1.2:10069548-10069567 | MS.gene54090:CDS | 35.0% | |
| GTCAAATATGCTAAGCATGA+TGG | + | chr1.2:10069330-10069349 | MS.gene54090:CDS | 35.0% | |
| GTTAGGATTGTTTGATGTGT+GGG | + | chr1.2:10066814-10066833 | MS.gene54090:intron | 35.0% | |
| TAAAGGTAAAGGCTAGTAAG+AGG | + | chr1.2:10068755-10068774 | MS.gene54090:CDS | 35.0% | |
| TAGAGAAAGAAAGAACTCTC+TGG | + | chr1.2:10069899-10069918 | MS.gene54090:CDS | 35.0% | |
| TATGTTTAGATGGAGGGTTT+AGG | + | chr1.2:10067550-10067569 | MS.gene54090:intron | 35.0% | |
| TCATCCTTGTACTTTCTCTT+GGG | - | chr1.2:10068490-10068509 | None:intergenic | 35.0% | |
| TGAAAACGATGGATCCAATA+TGG | + | chr1.2:10066760-10066779 | MS.gene54090:CDS | 35.0% | |
| TGAAAATATGAAGGGGTTTG+AGG | + | chr1.2:10066553-10066572 | MS.gene54090:CDS | 35.0% | |
| TGAAGATAAGCTGATTGATC+AGG | + | chr1.2:10066670-10066689 | MS.gene54090:CDS | 35.0% | |
| TGCTAGAAAGGAAAAACAGA+TGG | + | chr1.2:10068216-10068235 | MS.gene54090:CDS | 35.0% | |
| TGGAGAAAGAAAGAGCTTAA+GGG | + | chr1.2:10070043-10070062 | MS.gene54090:CDS | 35.0% | |
| TGTTAGGATTGTTTGATGTG+TGG | + | chr1.2:10066813-10066832 | MS.gene54090:intron | 35.0% | |
| TTTCAGTCGGAAGAAACAAT+TGG | + | chr1.2:10068390-10068409 | MS.gene54090:CDS | 35.0% | |
| ! | ATAGAGAAGCACAAAACAGA+AGG | + | chr1.2:10070255-10070274 | MS.gene54090:CDS | 35.0% |
| ! | ATTATTGGCATCAAGGTGTT+CGG | - | chr1.2:10066937-10066956 | None:intergenic | 35.0% |
| ! | ATTCTGATAGTGATGCTAAG+AGG | + | chr1.2:10068599-10068618 | MS.gene54090:CDS | 35.0% |
| ! | CAAGAGATGGAAAGCATAAA+AGG | + | chr1.2:10069646-10069665 | MS.gene54090:CDS | 35.0% |
| ! | CTGTCATTTATTTCCTCCTT+TGG | - | chr1.2:10069138-10069157 | None:intergenic | 35.0% |
| ! | GAAACCTGAACATTCCTTTT+TGG | + | chr1.2:10068360-10068379 | MS.gene54090:CDS | 35.0% |
| ! | GATGATGATGATGATGATGA+TGG | + | chr1.2:10070494-10070513 | MS.gene54090:CDS | 35.0% |
| ! | TAGAGAAGCACAAAACAGAA+GGG | + | chr1.2:10070256-10070275 | MS.gene54090:CDS | 35.0% |
| ! | TGATTTCTCTTCTGATAGTG+AGG | + | chr1.2:10068696-10068715 | MS.gene54090:CDS | 35.0% |
| ! | TTTCCTTTCTAGCAGCAATT+TGG | - | chr1.2:10068210-10068229 | None:intergenic | 35.0% |
| ! | TTTTGGACAGAGATTTCAGT+CGG | + | chr1.2:10068377-10068396 | MS.gene54090:CDS | 35.0% |
| !! | AGAAAAGAAGCTCTAGAGAT+GGG | + | chr1.2:10069940-10069959 | MS.gene54090:CDS | 35.0% |
| !! | AGTGGTTAGTTTCATGTTAG+GGG | + | chr1.2:10067208-10067227 | MS.gene54090:intron | 35.0% |
| !! | GAGAAAGAAGGCATTATAGA+AGG | + | chr1.2:10070528-10070547 | MS.gene54090:CDS | 35.0% |
| !! | GCTACAGAGTTTTAGTCTTT+GGG | + | chr1.2:10067675-10067694 | MS.gene54090:intron | 35.0% |
| !! | GGTTAGTTTCATATTAGAGG+CGG | + | chr1.2:10067710-10067729 | MS.gene54090:intron | 35.0% |
| !! | TGCTACAGAGTTTTAGTCTT+TGG | + | chr1.2:10067674-10067693 | MS.gene54090:intron | 35.0% |
| !! | TGGAGAAAGAAAGCACTTAA+GGG | + | chr1.2:10070220-10070239 | MS.gene54090:CDS | 35.0% |
| !! | TTACTAGCCTTTACCTTTAC+TGG | - | chr1.2:10068754-10068773 | None:intergenic | 35.0% |
| !! | TTGGAGAAAGAAAGCACTTA+AGG | + | chr1.2:10070219-10070238 | MS.gene54090:CDS | 35.0% |
| AAAATCGTCTTCATCCCTCA+AGG | - | chr1.2:10070201-10070220 | None:intergenic | 40.0% | |
| AACTCTACGTAGTTTCCTGA+GGG | + | chr1.2:10067527-10067546 | MS.gene54090:intron | 40.0% | |
| AAGAAAGAGCTTAAGGGATG+AGG | + | chr1.2:10070049-10070068 | MS.gene54090:CDS | 40.0% | |
| AAGAACTTAAGGGATGGCAA+TGG | + | chr1.2:10069981-10070000 | MS.gene54090:CDS | 40.0% | |
| AAGCACAAAACAGAAGGGAT+GGG | + | chr1.2:10070261-10070280 | MS.gene54090:CDS | 40.0% | |
| AAGCAGAAAACAAGGAGGTA+TGG | + | chr1.2:10068928-10068947 | MS.gene54090:CDS | 40.0% | |
| ACGGAGAAAGAAAGATCAGA+AGG | + | chr1.2:10069790-10069809 | MS.gene54090:CDS | 40.0% | |
| AGAAAGAGCTTAAGGGATGA+GGG | + | chr1.2:10070050-10070069 | MS.gene54090:CDS | 40.0% | |
| AGAATCCAATCCATCAACCT+TGG | - | chr1.2:10069193-10069212 | None:intergenic | 40.0% | |
| AGGAGAAAGAAAGAACTCTC+GGG | + | chr1.2:10070079-10070098 | MS.gene54090:CDS | 40.0% | |
| AGTACGGATGATGAGAAAAC+AGG | + | chr1.2:10068529-10068548 | MS.gene54090:CDS | 40.0% | |
| AGTTTCAGGGGGTAATGTTA+AGG | + | chr1.2:10067381-10067400 | MS.gene54090:intron | 40.0% | |
| ATGAGGATGATCGCAAAGAA+AGG | + | chr1.2:10070315-10070334 | MS.gene54090:CDS | 40.0% | |
| ATGATGGTCATGGAGAAAGA+AGG | + | chr1.2:10070516-10070535 | MS.gene54090:CDS | 40.0% | |
| CGATGCTCTCTATGAATTGT+TGG | + | chr1.2:10066880-10066899 | MS.gene54090:intron | 40.0% | |
| CGATGCTCTCTATGTATTGT+TGG | + | chr1.2:10067011-10067030 | MS.gene54090:intron | 40.0% | |
| CTAAATCAGCTAGGATCAGA+GGG | + | chr1.2:10069436-10069455 | MS.gene54090:CDS | 40.0% | |
| CTGTCCAAAAAGGAATGTTC+AGG | - | chr1.2:10068367-10068386 | None:intergenic | 40.0% | |
| GAAACATTGAAAGCTGCTCT+TGG | + | chr1.2:10068238-10068257 | MS.gene54090:CDS | 40.0% | |
| GAAAGAAAGAACTCTCTGGA+TGG | + | chr1.2:10069903-10069922 | MS.gene54090:CDS | 40.0% | |
| GAAAGGAAGAACTTAAGGGA+TGG | + | chr1.2:10069975-10069994 | MS.gene54090:CDS | 40.0% | |
| GACTTGAGAAGCAGAAAACA+AGG | + | chr1.2:10068920-10068939 | MS.gene54090:CDS | 40.0% | |
| GAGGAGAAAGAAAGAACTCT+CGG | + | chr1.2:10070078-10070097 | MS.gene54090:CDS | 40.0% | |
| GATAGTGAGGAAGAGAAACA+TGG | + | chr1.2:10068895-10068914 | MS.gene54090:CDS | 40.0% | |
| GATGGACAAGATAGGAAGTT+TGG | + | chr1.2:10069348-10069367 | MS.gene54090:CDS | 40.0% | |
| GATTGATCAGGGTTATACTG+AGG | + | chr1.2:10066682-10066701 | MS.gene54090:CDS | 40.0% | |
| GCAAAGAAAGGAAGAACTCA+AGG | + | chr1.2:10070327-10070346 | MS.gene54090:CDS | 40.0% | |
| GGAGATTCTGATCATCATGA+AGG | + | chr1.2:10068790-10068809 | MS.gene54090:CDS | 40.0% | |
| GGGAGGATTATGAAACAAGA+AGG | + | chr1.2:10069544-10069563 | MS.gene54090:CDS | 40.0% | |
| GTCTGTGGGTTTGAATTAAG+TGG | + | chr1.2:10067190-10067209 | MS.gene54090:intron | 40.0% | |
| GTTTCAGGGGGTAATGTTAA+GGG | + | chr1.2:10067382-10067401 | MS.gene54090:intron | 40.0% | |
| TACAGATGGGAATGATGAAG+GGG | + | chr1.2:10068288-10068307 | MS.gene54090:CDS | 40.0% | |
| TACAGGAAGAAAGACCTTGA+GGG | + | chr1.2:10070184-10070203 | MS.gene54090:CDS | 40.0% | |
| TATAGAAGGGATGATGATCG+TGG | + | chr1.2:10070542-10070561 | MS.gene54090:CDS | 40.0% | |
| TCACCAAATTGCTGCTAGAA+AGG | + | chr1.2:10068204-10068223 | MS.gene54090:CDS | 40.0% | |
| TCTAAATCAGCTAGGATCAG+AGG | + | chr1.2:10069435-10069454 | MS.gene54090:CDS | 40.0% | |
| TGGACGAATTGATCGGAATA+GGG | + | chr1.2:10069524-10069543 | MS.gene54090:CDS | 40.0% | |
| TTATACTGAGGCTGAGATTG+CGG | + | chr1.2:10066694-10066713 | MS.gene54090:CDS | 40.0% | |
| TTGAGAAGCAGAAAACAAGG+AGG | + | chr1.2:10068923-10068942 | MS.gene54090:CDS | 40.0% | |
| TTGAGGGATGAAGATGATCA+CGG | + | chr1.2:10069771-10069790 | MS.gene54090:CDS | 40.0% | |
| TTGGACGAATTGATCGGAAT+AGG | + | chr1.2:10069523-10069542 | MS.gene54090:CDS | 40.0% | |
| ! | AAAAGCGTAAGAGACGAAGA+TGG | + | chr1.2:10069693-10069712 | MS.gene54090:CDS | 40.0% |
| ! | AACTCCCAAGAGAAAGTACA+AGG | + | chr1.2:10068483-10068502 | MS.gene54090:CDS | 40.0% |
| ! | AGTAAGAGGCATGATTCAGA+TGG | + | chr1.2:10068769-10068788 | MS.gene54090:CDS | 40.0% |
| ! | AGTAGCAGTGATAGTGAAAC+TGG | + | chr1.2:10069045-10069064 | MS.gene54090:CDS | 40.0% |
| ! | GAGGTATGGTTCTATTGATG+CGG | + | chr1.2:10068942-10068961 | MS.gene54090:CDS | 40.0% |
| ! | GTCTTTGGGTTTGAACTAAG+TGG | + | chr1.2:10067689-10067708 | MS.gene54090:intron | 40.0% |
| ! | GTTGCTTTGAATGTACCCAT+TGG | - | chr1.2:10066498-10066517 | None:intergenic | 40.0% |
| ! | TACTGCTGGTGTTAGTAGAA+AGG | + | chr1.2:10066586-10066605 | MS.gene54090:CDS | 40.0% |
| ! | TAGAGCTTCTTTTCTCTCCA+CGG | - | chr1.2:10069935-10069954 | None:intergenic | 40.0% |
| ! | TCACTTTCGATGAGAAGTGT+GGG | + | chr1.2:10067152-10067171 | MS.gene54090:intron | 40.0% |
| ! | TGAGGGTATGTTTAGATGGA+GGG | + | chr1.2:10067544-10067563 | MS.gene54090:intron | 40.0% |
| ! | TGATAGTGATGCTAAGAGGA+AGG | + | chr1.2:10068603-10068622 | MS.gene54090:CDS | 40.0% |
| ! | TTCCTGAGGGTATGTTTAGA+TGG | + | chr1.2:10067540-10067559 | MS.gene54090:intron | 40.0% |
| ! | TTGAGGGATGAAGACGATTT+TGG | + | chr1.2:10070200-10070219 | MS.gene54090:CDS | 40.0% |
| !! | AAGAAAGCACTTAAGGGATG+AGG | + | chr1.2:10070226-10070245 | MS.gene54090:CDS | 40.0% |
| !! | AGAAAGCACTTAAGGGATGA+GGG | + | chr1.2:10070227-10070246 | MS.gene54090:CDS | 40.0% |
| !! | CTAAGCATGATGGACAAGAT+AGG | + | chr1.2:10069340-10069359 | MS.gene54090:CDS | 40.0% |
| !! | GAAAAGAAGCTCTAGAGATG+GGG | + | chr1.2:10069941-10069960 | MS.gene54090:CDS | 40.0% |
| !! | GAGAAAAGAAGCTCTAGAGA+TGG | + | chr1.2:10069939-10069958 | MS.gene54090:CDS | 40.0% |
| !! | GATGATGATGATGATGGTCA+TGG | + | chr1.2:10070506-10070525 | MS.gene54090:CDS | 40.0% |
| !! | TACAGGAAGAAAGCACTTGA+GGG | + | chr1.2:10069755-10069774 | MS.gene54090:CDS | 40.0% |
| AAGAACTTAAGGGATGAGGG+TGG | + | chr1.2:10069873-10069892 | MS.gene54090:CDS | 45.0% | |
| AAGGAAGAACTCAAGGGAAG+AGG | + | chr1.2:10070334-10070353 | MS.gene54090:CDS | 45.0% | |
| AATGACAGAGGTAATGCTGC+AGG | + | chr1.2:10069150-10069169 | MS.gene54090:CDS | 45.0% | |
| ACAGAGAGAGAAAGAGCTCA+AGG | + | chr1.2:10070399-10070418 | MS.gene54090:CDS | 45.0% | |
| ACGAATTGATCGGAATAGGG+AGG | + | chr1.2:10069527-10069546 | MS.gene54090:CDS | 45.0% | |
| AGAGGGGATGATGAGTATCA+TGG | + | chr1.2:10070452-10070471 | MS.gene54090:CDS | 45.0% | |
| AGAGGTAATGCTGCAGGAAA+AGG | + | chr1.2:10069156-10069175 | MS.gene54090:CDS | 45.0% | |
| AGCACAAAACAGAAGGGATG+GGG | + | chr1.2:10070262-10070281 | MS.gene54090:CDS | 45.0% | |
| AGGATTGAGGATGATCGTAC+AGG | + | chr1.2:10070167-10070186 | MS.gene54090:CDS | 45.0% | |
| ATAATCATCCCCATCCCTCA+AGG | - | chr1.2:10069844-10069863 | None:intergenic | 45.0% | |
| ATCACTGCTACTCTCATCAG+AGG | - | chr1.2:10069037-10069056 | None:intergenic | 45.0% | |
| ATCAGCGTCAGATTCCTCTT+CGG | - | chr1.2:10068878-10068897 | None:intergenic | 45.0% | |
| CAAACGTCATGATTCCGAAG+AGG | + | chr1.2:10068861-10068880 | MS.gene54090:CDS | 45.0% | |
| CAACTCTACGTAGTTTCCTG+AGG | + | chr1.2:10067526-10067545 | MS.gene54090:intron | 45.0% | |
| CAGAGAGAGAAAGAGCTCAA+GGG | + | chr1.2:10070400-10070419 | MS.gene54090:CDS | 45.0% | |
| CAGTCGGAAGAAACAATTGG+AGG | + | chr1.2:10068393-10068412 | MS.gene54090:CDS | 45.0% | |
| CTCAAGTGCTTTCTTCCTGT+AGG | - | chr1.2:10069756-10069775 | None:intergenic | 45.0% | |
| CTCACTTTCGATGAGAAGTG+TGG | + | chr1.2:10067151-10067170 | MS.gene54090:intron | 45.0% | |
| CTCCATCTAAACATACCCTC+AGG | - | chr1.2:10067545-10067564 | None:intergenic | 45.0% | |
| GAAAGAAAGAACTCTCGGGA+TGG | + | chr1.2:10070083-10070102 | MS.gene54090:CDS | 45.0% | |
| GAAGCACAAAACAGAAGGGA+TGG | + | chr1.2:10070260-10070279 | MS.gene54090:CDS | 45.0% | |
| GAGGTAATGCTGCAGGAAAA+GGG | + | chr1.2:10069157-10069176 | MS.gene54090:CDS | 45.0% | |
| GGTAATGTTAAGGGCCCATT+TGG | + | chr1.2:10067391-10067410 | MS.gene54090:intron | 45.0% | |
| GGTTGCTGTGTGTGATTTAG+AGG | + | chr1.2:10067340-10067359 | MS.gene54090:intron | 45.0% | |
| GTACAGGAAGAAAGACCTTG+AGG | + | chr1.2:10070183-10070202 | MS.gene54090:CDS | 45.0% | |
| TCAGCAACCTTCGAAGTTCT+CGG | - | chr1.2:10066536-10066555 | None:intergenic | 45.0% | |
| TCTAGGGATGGGGATGATTA+TGG | + | chr1.2:10070023-10070042 | MS.gene54090:CDS | 45.0% | |
| TGAAGAGGCGAGGAATAACT+TGG | + | chr1.2:10066724-10066743 | MS.gene54090:CDS | 45.0% | |
| TGATGCTAAGAGGAAGGTCA+AGG | + | chr1.2:10068609-10068628 | MS.gene54090:CDS | 45.0% | |
| TGGAGAGAAAAGGAGCTCTA+GGG | + | chr1.2:10070007-10070026 | MS.gene54090:CDS | 45.0% | |
| TTCTTGAGCATGACCGAAAG+CGG | + | chr1.2:10066621-10066640 | MS.gene54090:CDS | 45.0% | |
| TTGAGGGATGGGGATGATTA+TGG | + | chr1.2:10069843-10069862 | MS.gene54090:CDS | 45.0% | |
| TTTAGATGGAGGGTTTAGGG+CGG | + | chr1.2:10067554-10067573 | MS.gene54090:intron | 45.0% | |
| ! | ACATCTAAGCACCGCAAGAA+AGG | + | chr1.2:10068649-10068668 | MS.gene54090:CDS | 45.0% |
| ! | AGAGAAGAACTCTAGGGATG+TGG | + | chr1.2:10070118-10070137 | MS.gene54090:CDS | 45.0% |
| ! | AGTGATAGTGATCGCAGGTA+TGG | + | chr1.2:10069072-10069091 | MS.gene54090:CDS | 45.0% |
| ! | ATGGAGAAAGAAAGCGCAGA+AGG | + | chr1.2:10070471-10070490 | MS.gene54090:CDS | 45.0% |
| ! | CTCTTACGCTTTTCTTCTCC+CGG | - | chr1.2:10069686-10069705 | None:intergenic | 45.0% |
| ! | CTGAGGGTATGTTTAGATGG+AGG | + | chr1.2:10067543-10067562 | MS.gene54090:intron | 45.0% |
| ! | GAGAAGAACTCTAGGGATGT+GGG | + | chr1.2:10070119-10070138 | MS.gene54090:CDS | 45.0% |
| ! | GTAGGACTAGTGAAGTGAAG+AGG | + | chr1.2:10068824-10068843 | MS.gene54090:CDS | 45.0% |
| ! | TAGAGCTCCTTTTCTCTCCA+CGG | - | chr1.2:10070007-10070026 | None:intergenic | 45.0% |
| ! | TGGAAAGCATAAAAGGGACG+AGG | + | chr1.2:10069653-10069672 | MS.gene54090:CDS | 45.0% |
| ! | TGGAGAAAGAAAGCGCAGAA+GGG | + | chr1.2:10070472-10070491 | MS.gene54090:CDS | 45.0% |
| ! | TGGAGAAAGGAAGCACAGAA+GGG | + | chr1.2:10070562-10070581 | MS.gene54090:CDS | 45.0% |
| ! | TTTTTGTCAGAAGAGTCCCG+TGG | - | chr1.2:10067272-10067291 | None:intergenic | 45.0% |
| !! | AGAAAAGGAGCTCTAGGGAT+GGG | + | chr1.2:10070012-10070031 | MS.gene54090:CDS | 45.0% |
| !! | CTACAGGAAGAAAGCACTTG+AGG | + | chr1.2:10069754-10069773 | MS.gene54090:CDS | 45.0% |
| !! | GGTTAGTTTCATGTTAGGGG+CGG | + | chr1.2:10067211-10067230 | MS.gene54090:intron | 45.0% |
| !! | TAGTGCCAAGGTTGATGGAT+TGG | + | chr1.2:10069185-10069204 | MS.gene54090:CDS | 45.0% |
| !!! | TAATTTTCTTAAAATATTAT+TGG | - | chr1.2:10066952-10066971 | None:intergenic | 5.0% |
| !!! | TAATTTTCTTAAATTATTAT+TGG | - | chr1.2:10067089-10067108 | None:intergenic | 5.0% |
| AAGAACTCTCGGGATGGTGA+TGG | + | chr1.2:10070089-10070108 | MS.gene54090:CDS | 50.0% | |
| AAGAGCTTAAGGGATGAGGG+TGG | + | chr1.2:10070053-10070072 | MS.gene54090:CDS | 50.0% | |
| AAGATGGTCGTGGAGAGAGA+AGG | + | chr1.2:10069709-10069728 | MS.gene54090:CDS | 50.0% | |
| AAGGAAGACCTTGAGGGATG+GGG | + | chr1.2:10069833-10069852 | MS.gene54090:CDS | 50.0% | |
| AAGGGATGAGGATGTTCGTG+GGG | + | chr1.2:10070418-10070437 | MS.gene54090:CDS | 50.0% | |
| AAGGGGTTTGAGGGAGATCA+AGG | + | chr1.2:10066563-10066582 | MS.gene54090:CDS | 50.0% | |
| ACTCTGGTAGAGGCAGTGTT+AGG | + | chr1.2:10068965-10068984 | MS.gene54090:CDS | 50.0% | |
| ACTTCACTAGTCCTACGCCT+GGG | - | chr1.2:10068820-10068839 | None:intergenic | 50.0% | |
| AGAGGCGAGGAATAACTTGG+AGG | + | chr1.2:10066727-10066746 | MS.gene54090:CDS | 50.0% | |
| AGCGAAGAGAAGTGAGCCAA+AGG | + | chr1.2:10069119-10069138 | MS.gene54090:CDS | 50.0% | |
| AGGATTGAGGATGAACGTGC+AGG | + | chr1.2:10069810-10069829 | MS.gene54090:CDS | 50.0% | |
| ATCGGGTTACAAACCCCAAG+AGG | + | chr1.2:10066464-10066483 | MS.gene54090:CDS | 50.0% | |
| ATGAAGGGGCTGGAAACGAA+GGG | + | chr1.2:10068302-10068321 | MS.gene54090:CDS | 50.0% | |
| ATTGATGCGGACTCTGGTAG+AGG | + | chr1.2:10068955-10068974 | MS.gene54090:CDS | 50.0% | |
| ATTGGTACCAGACCCTCTTG+GGG | - | chr1.2:10066480-10066499 | None:intergenic | 50.0% | |
| CAAAACAGAAGGGATGGGGA+TGG | + | chr1.2:10070266-10070285 | MS.gene54090:CDS | 50.0% | |
| CAAGAGGGTCTGGTACCAAT+GGG | + | chr1.2:10066480-10066499 | MS.gene54090:CDS | 50.0% | |
| CAAGGGATGAGGATGTTCGT+GGG | + | chr1.2:10070417-10070436 | MS.gene54090:CDS | 50.0% | |
| CATTGGTACCAGACCCTCTT+GGG | - | chr1.2:10066481-10066500 | None:intergenic | 50.0% | |
| CCCTAGAGTTCTTCTCTCCT+CGG | - | chr1.2:10070115-10070134 | None:intergenic | 50.0% | |
| CCGAGGAGAGAAGAACTCTA+GGG | + | chr1.2:10070112-10070131 | MS.gene54090:CDS | 50.0% | |
| CGAGTCCTGTGTACACAACA+CGG | - | chr1.2:10067634-10067653 | None:intergenic | 50.0% | |
| GAAGAGAAGTGAGCCAAAGG+AGG | + | chr1.2:10069122-10069141 | MS.gene54090:CDS | 50.0% | |
| GAAGGAAGACCTTGAGGGAT+GGG | + | chr1.2:10069832-10069851 | MS.gene54090:CDS | 50.0% | |
| GAGAAAGAGCTCAAGGGATG+AGG | + | chr1.2:10070406-10070425 | MS.gene54090:CDS | 50.0% | |
| GATTGCGGAGAAGCTTGAAG+AGG | + | chr1.2:10066709-10066728 | MS.gene54090:CDS | 50.0% | |
| GCTGCAGCTGATGAAAACGA+TGG | + | chr1.2:10066749-10066768 | MS.gene54090:CDS | 50.0% | |
| GCTGTGTGTGATTTAGAGGC+TGG | + | chr1.2:10067344-10067363 | MS.gene54090:intron | 50.0% | |
| GGGATGATGATCGTGGAGAA+AGG | + | chr1.2:10070549-10070568 | MS.gene54090:CDS | 50.0% | |
| GGTTCTATTGATGCGGACTC+TGG | + | chr1.2:10068949-10068968 | MS.gene54090:CDS | 50.0% | |
| GTAAGAGACGAAGATGGTCG+TGG | + | chr1.2:10069699-10069718 | MS.gene54090:CDS | 50.0% | |
| GTGGAGAGAAAAGGAGCTCT+AGG | + | chr1.2:10070006-10070025 | MS.gene54090:CDS | 50.0% | |
| TCAAGGGATGAGGATGTTCG+TGG | + | chr1.2:10070416-10070435 | MS.gene54090:CDS | 50.0% | |
| TCGGGTTACAAACCCCAAGA+GGG | + | chr1.2:10066465-10066484 | MS.gene54090:CDS | 50.0% | |
| TGCAGGAAGGAAGACCTTGA+GGG | + | chr1.2:10069827-10069846 | MS.gene54090:CDS | 50.0% | |
| TGTGTCCGTGTTGTGTACAC+AGG | + | chr1.2:10067626-10067645 | MS.gene54090:intron | 50.0% | |
| TTACAAACCCCAAGAGGGTC+TGG | + | chr1.2:10066470-10066489 | MS.gene54090:CDS | 50.0% | |
| TTGAGGATGAACGTGCAGGA+AGG | + | chr1.2:10069814-10069833 | MS.gene54090:CDS | 50.0% | |
| ! | AGACACAAAGCGCCACAAGA+AGG | + | chr1.2:10068456-10068475 | MS.gene54090:CDS | 50.0% |
| ! | GACACAAAGCGCCACAAGAA+GGG | + | chr1.2:10068457-10068476 | MS.gene54090:CDS | 50.0% |
| ! | GCGGCAGAGTTTTTGTCTGT+GGG | + | chr1.2:10067176-10067195 | MS.gene54090:intron | 50.0% |
| ! | GGAATCTGACGCTGATAGTG+AGG | + | chr1.2:10068882-10068901 | MS.gene54090:CDS | 50.0% |
| ! | GTGGAGAAAGGAAGCACAGA+AGG | + | chr1.2:10070561-10070580 | MS.gene54090:CDS | 50.0% |
| ! | TAAGCACCGCAAGAAAGGCA+GGG | + | chr1.2:10068654-10068673 | MS.gene54090:CDS | 50.0% |
| ! | TCGCCTTCGATGAGAAGTGT+GGG | + | chr1.2:10067651-10067670 | MS.gene54090:intron | 50.0% |
| ! | TGCGGCAGAGTTTTTGTCTG+TGG | + | chr1.2:10067175-10067194 | MS.gene54090:intron | 50.0% |
| ! | TGGAGAGAGAAGGCATGGAA+AGG | + | chr1.2:10069719-10069738 | MS.gene54090:CDS | 50.0% |
| ! | TTACGCTTTTCTTCTCCCGG+CGG | - | chr1.2:10069683-10069702 | None:intergenic | 50.0% |
| ! | TTAGATGGAGGGTTTAGGGC+GGG | + | chr1.2:10067555-10067574 | MS.gene54090:intron | 50.0% |
| ! | TTCGATGAGAAGTGTGGGTG+CGG | + | chr1.2:10067157-10067176 | MS.gene54090:intron | 50.0% |
| !! | GAAAAGGAGCTCTAGGGATG+GGG | + | chr1.2:10070013-10070032 | MS.gene54090:CDS | 50.0% |
| !! | GAGAAAAGGAGCTCTAGGGA+TGG | + | chr1.2:10070011-10070030 | MS.gene54090:CDS | 50.0% |
| !! | TCAGCTGAATCTGCCGCTTT+CGG | - | chr1.2:10066637-10066656 | None:intergenic | 50.0% |
| CACTTCACTAGTCCTACGCC+TGG | - | chr1.2:10068821-10068840 | None:intergenic | 55.0% | |
| CATCCACCCTGCCTTTCTTG+CGG | - | chr1.2:10068663-10068682 | None:intergenic | 55.0% | |
| CCAAGAGGGTCTGGTACCAA+TGG | + | chr1.2:10066479-10066498 | MS.gene54090:CDS | 55.0% | |
| CCATTGGTACCAGACCCTCT+TGG | - | chr1.2:10066482-10066501 | None:intergenic | 55.0% | |
| CGTGAAGCCGAGAACTTCGA+AGG | + | chr1.2:10066526-10066545 | MS.gene54090:CDS | 55.0% | |
| CTCGCCTTCGATGAGAAGTG+TGG | + | chr1.2:10067650-10067669 | MS.gene54090:intron | 55.0% | |
| GATGAAGGGGCTGGAAACGA+AGG | + | chr1.2:10068301-10068320 | MS.gene54090:CDS | 55.0% | |
| GATGGGAATGATGAAGGGGC+TGG | + | chr1.2:10068292-10068311 | MS.gene54090:CDS | 55.0% | |
| GCAATGGCCGTGGAGAGAAA+AGG | + | chr1.2:10069997-10070016 | MS.gene54090:CDS | 55.0% | |
| GCACCCACACTTCTCATCGA+AGG | - | chr1.2:10067158-10067177 | None:intergenic | 55.0% | |
| GCCGAGGAGAGAAGAACTCT+AGG | + | chr1.2:10070111-10070130 | MS.gene54090:CDS | 55.0% | |
| GGAAGGAAGACCTTGAGGGA+TGG | + | chr1.2:10069831-10069850 | MS.gene54090:CDS | 55.0% | |
| GGCAGTGTTAGGCATGCTTC+AGG | + | chr1.2:10068976-10068995 | MS.gene54090:CDS | 55.0% | |
| GTGCAGGAAGGAAGACCTTG+AGG | + | chr1.2:10069826-10069845 | MS.gene54090:CDS | 55.0% | |
| TGGGAGTTCCACCCTTCTTG+TGG | - | chr1.2:10068471-10068490 | None:intergenic | 55.0% | |
| TTAAGGGATGAGGGTGGCAG+AGG | + | chr1.2:10069879-10069898 | MS.gene54090:CDS | 55.0% | |
| TTAAGGGATGGCAATGGCCG+TGG | + | chr1.2:10069987-10070006 | MS.gene54090:CDS | 55.0% | |
| ! | ACAAAGCGCCACAAGAAGGG+TGG | + | chr1.2:10068460-10068479 | MS.gene54090:CDS | 55.0% |
| ! | ATCATCATGAAGGCGTGCCC+AGG | + | chr1.2:10068800-10068819 | MS.gene54090:CDS | 55.0% |
| ! | CTAAGCACCGCAAGAAAGGC+AGG | + | chr1.2:10068653-10068672 | MS.gene54090:CDS | 55.0% |
| ! | GCAGCAGTGATAGTGATCGC+AGG | + | chr1.2:10069067-10069086 | MS.gene54090:CDS | 55.0% |
| !! | GAGGGAGATCAAGGTACTGC+TGG | + | chr1.2:10066572-10066591 | MS.gene54090:CDS | 55.0% |
| AAAGGGACGAGGAAGACCGC+CGG | + | chr1.2:10069664-10069683 | MS.gene54090:CDS | 60.0% | |
| CGGAGAAGCTTGAAGAGGCG+AGG | + | chr1.2:10066714-10066733 | MS.gene54090:CDS | 60.0% | |
| GGTCGTGGAGAGAGAAGGCA+TGG | + | chr1.2:10069714-10069733 | MS.gene54090:CDS | 60.0% | |
| TCTCTGGATGGCGATGTCCG+TGG | + | chr1.2:10069915-10069934 | MS.gene54090:CDS | 60.0% | |
| ! | ATGGAGGGTTTAGGGCGGGA+TGG | + | chr1.2:10067559-10067578 | MS.gene54090:intron | 60.0% |
| AAGGGACGAGGAAGACCGCC+GGG | + | chr1.2:10069665-10069684 | MS.gene54090:CDS | 65.0% | |
| GCACCGCAAGAAAGGCAGGG+TGG | + | chr1.2:10068657-10068676 | MS.gene54090:CDS | 65.0% | |
| ! | ATGAAGGCGTGCCCAGGCGT+AGG | + | chr1.2:10068806-10068825 | MS.gene54090:CDS | 65.0% |
| !! | TCTCGGGATGGTGATGGCCG+AGG | + | chr1.2:10070095-10070114 | MS.gene54090:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 10066452 | 10070589 | 10066452 | ID=MS.gene54090 |
| chr1.2 | mRNA | 10066452 | 10070589 | 10066452 | ID=MS.gene54090.t1;Parent=MS.gene54090 |
| chr1.2 | exon | 10066452 | 10066786 | 10066452 | ID=MS.gene54090.t1.exon1;Parent=MS.gene54090.t1 |
| chr1.2 | CDS | 10066452 | 10066786 | 10066452 | ID=cds.MS.gene54090.t1;Parent=MS.gene54090.t1 |
| chr1.2 | exon | 10068186 | 10070589 | 10068186 | ID=MS.gene54090.t1.exon2;Parent=MS.gene54090.t1 |
| chr1.2 | CDS | 10068186 | 10070589 | 10068186 | ID=cds.MS.gene54090.t1;Parent=MS.gene54090.t1 |
| Gene Sequence |
| Protein sequence |
