Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66827.t1 | XP_003603858.2 | 97.4 | 616 | 16 | 0 | 1 | 616 | 2 | 617 | 0.00E+00 | 1169.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66827.t1 | Q9SFX3 | 67.2 | 607 | 198 | 1 | 10 | 616 | 9 | 614 | 1.9e-232 | 806.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66827.t1 | G7J5Z1 | 97.4 | 616 | 16 | 0 | 1 | 616 | 2 | 617 | 0.0e+00 | 1169.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050338 | MS.gene66827 | 0.812311 | 4.52E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene66827 | -0.806057 | 9.89E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene66827 | -0.814983 | 1.17E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene66827 | -0.81425 | 1.70E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene66827 | 0.81293 | 3.31E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene66827 | -0.81393 | 1.99E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene66827 | -0.802271 | 6.07E-49 | -1.69E-46 |
| MS.gene055729 | MS.gene66827 | 0.803543 | 3.32E-49 | -1.69E-46 |
| MS.gene055731 | MS.gene66827 | 0.809737 | 1.63E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene66827 | -0.811643 | 6.32E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene66827 | -0.81017 | 1.32E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene66827 | -0.823505 | 1.34E-53 | -1.69E-46 |
| MS.gene056283 | MS.gene66827 | -0.80926 | 2.07E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene66827 | -0.803681 | 3.10E-49 | -1.69E-46 |
| MS.gene056678 | MS.gene66827 | 0.824866 | 6.40E-54 | -1.69E-46 |
| MS.gene057081 | MS.gene66827 | 0.805318 | 1.41E-49 | -1.69E-46 |
| MS.gene05732 | MS.gene66827 | 0.805558 | 1.26E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene66827 | 0.810733 | 9.95E-51 | -1.69E-46 |
| MS.gene05926 | MS.gene66827 | 0.805933 | 1.05E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene66827 | -0.807501 | 4.90E-50 | -1.69E-46 |
| MS.gene06080 | MS.gene66827 | 0.829769 | 4.28E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene66827 | -0.814974 | 1.17E-51 | -1.69E-46 |
| MS.gene061044 | MS.gene66827 | 0.819508 | 1.12E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50921 | MS.gene66827 | PPI |
| MS.gene05210 | MS.gene66827 | PPI |
| MS.gene057988 | MS.gene66827 | PPI |
| MS.gene37721 | MS.gene66827 | PPI |
| MS.gene40930 | MS.gene66827 | PPI |
| MS.gene66827 | MS.gene026843 | PPI |
| MS.gene66827 | MS.gene039901 | PPI |
| MS.gene039903 | MS.gene66827 | PPI |
| MS.gene049245 | MS.gene66827 | PPI |
| MS.gene001011 | MS.gene66827 | PPI |
| MS.gene060603 | MS.gene66827 | PPI |
| MS.gene013275 | MS.gene66827 | PPI |
| MS.gene66827 | MS.gene50024 | PPI |
| MS.gene060182 | MS.gene66827 | PPI |
| MS.gene66827 | MS.gene57836 | PPI |
| MS.gene057990 | MS.gene66827 | PPI |
| MS.gene50925 | MS.gene66827 | PPI |
| MS.gene06356 | MS.gene66827 | PPI |
| MS.gene63757 | MS.gene66827 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66827.t1 | MTR_3g115980 | 97.569 | 617 | 14 | 1 | 1 | 616 | 1 | 617 | 0.0 | 1238 |
| MS.gene66827.t1 | MTR_1g094870 | 54.095 | 464 | 210 | 2 | 4 | 466 | 8 | 469 | 6.54e-172 | 497 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66827.t1 | AT1G76400 | 68.412 | 592 | 186 | 1 | 25 | 616 | 24 | 614 | 0.0 | 843 |
| MS.gene66827.t1 | AT1G76400 | 68.113 | 530 | 168 | 1 | 25 | 554 | 24 | 552 | 0.0 | 752 |
| MS.gene66827.t1 | AT2G01720 | 53.057 | 458 | 205 | 4 | 14 | 465 | 10 | 463 | 1.12e-165 | 481 |
Find 144 sgRNAs with CRISPR-Local
Find 472 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGACTTCTGCATCTTATT+TGG | 0.144569 | 3.4:+98981359 | MS.gene66827:CDS |
| CATCGTTGCGTGATCTTTCT+AGG | 0.176304 | 3.4:+98981555 | MS.gene66827:CDS |
| CTGGAAATGGTTGCAATATA+TGG | 0.199405 | 3.4:-98977187 | None:intergenic |
| CGCTTCCTTAATATCTCTTT+TGG | 0.225268 | 3.4:+98977988 | MS.gene66827:CDS |
| GAGCCGTTAATGTTGATTTC+TGG | 0.228415 | 3.4:+98981279 | MS.gene66827:CDS |
| GTCAATCACCAAATCATTAA+TGG | 0.250801 | 3.4:-98978016 | None:intergenic |
| CCACTTCAGGACTTCTTGTT+TGG | 0.252717 | 3.4:+98977952 | MS.gene66827:CDS |
| ACAAGAGATTTATGATCTTA+TGG | 0.256694 | 3.4:+98981966 | MS.gene66827:CDS |
| TCGCCCTTCCCAAGGCCTTT+AGG | 0.289486 | 3.4:-98977131 | None:intergenic |
| AAGGAAGAGGGAATATCTTT+AGG | 0.294373 | 3.4:-98977086 | None:intergenic |
| TGTCTTTCTTTCACAGGAAA+TGG | 0.294905 | 3.4:-98978416 | None:intergenic |
| CTGCTGCAGACTTGACTATC+AGG | 0.298525 | 3.4:+98977635 | MS.gene66827:intron |
| AAGTGCTTTACATGGTTATC+AGG | 0.308889 | 3.4:-98976978 | None:intergenic |
| TGGATATGGGTTGCCACTTC+AGG | 0.311465 | 3.4:+98977939 | MS.gene66827:CDS |
| GCTGGAAAATACAAAACTTC+AGG | 0.319386 | 3.4:+98977340 | MS.gene66827:CDS |
| GGGAACCAAAAGAGATATTA+AGG | 0.322733 | 3.4:-98977993 | None:intergenic |
| TGCTAAGGAGAGAGATTTGC+AGG | 0.327633 | 3.4:+98981831 | MS.gene66827:CDS |
| TCAATCACCAAATCATTAAT+GGG | 0.328904 | 3.4:-98978015 | None:intergenic |
| TTTAGGGCGGACAACTTCAT+AGG | 0.340630 | 3.4:-98977069 | None:intergenic |
| AGGGCTGATTATTCTCAAAA+TGG | 0.345796 | 3.4:-98977427 | None:intergenic |
| TATTTCCACTTCTAGTTTGT+GGG | 0.353054 | 3.4:+98977755 | MS.gene66827:CDS |
| GATTGTTATGAGAAGAAGTT+AGG | 0.359037 | 3.4:+98981886 | MS.gene66827:CDS |
| ATATTTCCACTTCTAGTTTG+TGG | 0.370550 | 3.4:+98977754 | MS.gene66827:CDS |
| GAGCATTATAATCTTGTTCA+TGG | 0.371780 | 3.4:+98977515 | MS.gene66827:CDS |
| TTCTCAAAATGGATAACAAT+TGG | 0.382836 | 3.4:-98977416 | None:intergenic |
| GTAACTTTACCTAAAGGCCT+TGG | 0.391130 | 3.4:+98977122 | MS.gene66827:CDS |
| CAGGGATCTGAATTGAAATA+TGG | 0.392730 | 3.4:+98977359 | MS.gene66827:CDS |
| AGATTTGCAGGAGAAGCTTA+TGG | 0.399523 | 3.4:+98981843 | MS.gene66827:CDS |
| TAAGAGGTGCATCTGCCTTT+AGG | 0.408931 | 3.4:+98977670 | MS.gene66827:CDS |
| AGGAAGAGGGAATATCTTTA+GGG | 0.416520 | 3.4:-98977085 | None:intergenic |
| GGAAAGGCGAAATCATCTTC+TGG | 0.418481 | 3.4:+98977035 | MS.gene66827:CDS |
| GAGCTCATTCTGTTTACTAC+AGG | 0.418845 | 3.4:+98977718 | MS.gene66827:CDS |
| GATTGGACCTTCACGGGATA+AGG | 0.432111 | 3.4:-98977272 | None:intergenic |
| GAGGAAGGGAAATTGAAAAT+CGG | 0.432426 | 3.4:+98981908 | MS.gene66827:CDS |
| ATGAGAAGAAGTTAGGAGGA+AGG | 0.433364 | 3.4:+98981893 | MS.gene66827:CDS |
| AAGCCAGAAATCAACATTAA+CGG | 0.434432 | 3.4:-98981282 | None:intergenic |
| GGATGAGATCGGAGAGGACC+TGG | 0.435073 | 3.4:-98976149 | None:intergenic |
| CCGCACCACTACCACTCTTA+AGG | 0.447901 | 3.4:+98976363 | MS.gene66827:CDS |
| GTAATTTAACATTGAGCGAT+TGG | 0.448219 | 3.4:-98977289 | None:intergenic |
| ACCTCATGTCTTTCTTTCAC+AGG | 0.448961 | 3.4:-98978422 | None:intergenic |
| GACTTCTTGTTTGGAGTCGA+TGG | 0.451851 | 3.4:+98977961 | MS.gene66827:CDS |
| TAACTTTACCTAAAGGCCTT+GGG | 0.455605 | 3.4:+98977123 | MS.gene66827:CDS |
| GGTTCAAGCAACTATTCATC+AGG | 0.459505 | 3.4:+98981484 | MS.gene66827:intron |
| GTTTACTACAGGGATGAAAT+CGG | 0.459929 | 3.4:+98977729 | MS.gene66827:CDS |
| TATTCTGTAACTTTACCTAA+AGG | 0.460646 | 3.4:+98977116 | MS.gene66827:CDS |
| TTCTTCTCTAGCACGACAAC+AGG | 0.460738 | 3.4:-98978573 | None:intergenic |
| TCAACCGTCTTTCTATGCTC+AGG | 0.463333 | 3.4:+98981256 | MS.gene66827:CDS |
| GGAGATTGAGATATCCCATT+GGG | 0.465275 | 3.4:+98977475 | MS.gene66827:CDS |
| AGCAACGACTAATGATACTA+TGG | 0.470319 | 3.4:-98981508 | None:intergenic |
| TAAAGATATTCCCTCTTCCT+TGG | 0.470995 | 3.4:+98977088 | MS.gene66827:CDS |
| TCTAGGACAGGTGATATTCA+AGG | 0.471596 | 3.4:+98981572 | MS.gene66827:CDS |
| TGGAAATGGTTGCAATATAT+GGG | 0.474469 | 3.4:-98977186 | None:intergenic |
| TGAGAAGAAGTTAGGAGGAA+GGG | 0.475108 | 3.4:+98981894 | MS.gene66827:CDS |
| CTGGAAAATACAAAACTTCA+GGG | 0.476503 | 3.4:+98977341 | MS.gene66827:CDS |
| AATGGAGGAAGATTCTCATA+TGG | 0.481992 | 3.4:-98977383 | None:intergenic |
| GCGAAATCATCTTCTGGTGT+TGG | 0.483362 | 3.4:+98977041 | MS.gene66827:CDS |
| GCAGATGCACCTCTTACATA+TGG | 0.485700 | 3.4:-98977663 | None:intergenic |
| GGTAATATTTGAGCGGCTTG+TGG | 0.494892 | 3.4:-98981683 | None:intergenic |
| ACTTACACGACGGTCAACTT+TGG | 0.499801 | 3.4:-98976175 | None:intergenic |
| CTTATTTGGCAAAGATCCAA+TGG | 0.502030 | 3.4:+98981373 | MS.gene66827:CDS |
| CTTGGCAGTAAGACGCCTAA+AGG | 0.502523 | 3.4:-98977685 | None:intergenic |
| TTGCGTGATCTTTCTAGGAC+AGG | 0.503122 | 3.4:+98981560 | MS.gene66827:CDS |
| CAAATAAGATGCAGAAGTCT+TGG | 0.505500 | 3.4:-98981358 | None:intergenic |
| GAGCACCTTAAGAGTGGTAG+TGG | 0.506326 | 3.4:-98976368 | None:intergenic |
| ATTGAGCGATTGGACCTTCA+CGG | 0.508824 | 3.4:-98977279 | None:intergenic |
| AGTTGATTACCTCTTCCCAT+TGG | 0.512116 | 3.4:-98981389 | None:intergenic |
| AATAGAGTCCTACACAAAGC+TGG | 0.512238 | 3.4:+98977322 | MS.gene66827:CDS |
| AGAATAAGTTGCCAAGGAAG+AGG | 0.516063 | 3.4:-98977099 | None:intergenic |
| TGCACCTCTTACATATGGCC+TGG | 0.517740 | 3.4:-98977658 | None:intergenic |
| TTGAGCGATTGGACCTTCAC+GGG | 0.522891 | 3.4:-98977278 | None:intergenic |
| TAGGACTCTATTCTTGCCTC+AGG | 0.522970 | 3.4:-98977311 | None:intergenic |
| GAGGACCTGGGAGGATAGAA+TGG | 0.523253 | 3.4:-98976136 | None:intergenic |
| CAAAATGGATAACAATTGGC+AGG | 0.524969 | 3.4:-98977412 | None:intergenic |
| ATGAGCTCTTGGTGGCAGCT+TGG | 0.525565 | 3.4:-98977703 | None:intergenic |
| GAATAAGTTGCCAAGGAAGA+GGG | 0.531898 | 3.4:-98977098 | None:intergenic |
| TTCACAGGAAATGGAACAGA+TGG | 0.535738 | 3.4:-98978407 | None:intergenic |
| TAGTAAACAGAATGAGCTCT+TGG | 0.535990 | 3.4:-98977714 | None:intergenic |
| CTTTCAGGTTGTCTTGCCAG+AGG | 0.536714 | 3.4:+98978367 | MS.gene66827:intron |
| ACAATTGGCAGGTATGAGAA+TGG | 0.537574 | 3.4:-98977401 | None:intergenic |
| TTTCAGGTTGTCTTGCCAGA+GGG | 0.540711 | 3.4:+98978368 | MS.gene66827:intron |
| AACTCTTTAGCAACGGCGAA+GGG | 0.542494 | 3.4:-98977446 | None:intergenic |
| TGATCTGTACATTGCCCCAA+TGG | 0.542650 | 3.4:-98977490 | None:intergenic |
| TGAAAATGCTCATTATGCTC+AGG | 0.547728 | 3.4:-98978606 | None:intergenic |
| TGTTATGAGAAGAAGTTAGG+AGG | 0.549117 | 3.4:+98981889 | MS.gene66827:CDS |
| CAGGCCAGGCCATATGTAAG+AGG | 0.549205 | 3.4:+98977654 | MS.gene66827:CDS |
| CACGACGGTCAACTTTGGTA+AGG | 0.549384 | 3.4:-98976170 | None:intergenic |
| CTAGGACAGGTGATATTCAA+GGG | 0.554420 | 3.4:+98981573 | MS.gene66827:CDS |
| CTTCGCCGTTGCTAAAGAGT+TGG | 0.554612 | 3.4:+98977448 | MS.gene66827:CDS |
| CAACCGTCTTTCTATGCTCA+GGG | 0.556453 | 3.4:+98981257 | MS.gene66827:CDS |
| TTACCTAAAGGCCTTGGGAA+GGG | 0.556651 | 3.4:+98977128 | MS.gene66827:CDS |
| TCAAACTTTCGCCCTTCCCA+AGG | 0.557699 | 3.4:-98977139 | None:intergenic |
| GTCACCCCACAAACTAGAAG+TGG | 0.557838 | 3.4:-98977760 | None:intergenic |
| TTATTTGGCAAAGATCCAAT+GGG | 0.565258 | 3.4:+98981374 | MS.gene66827:CDS |
| CTTTACATGGTTATCAGGAA+AGG | 0.566975 | 3.4:-98976973 | None:intergenic |
| AGCAACACTTAACGAAGGAA+AGG | 0.568080 | 3.4:+98977013 | MS.gene66827:CDS |
| TGTATGCTAAGTGCTTTACA+TGG | 0.568391 | 3.4:-98976986 | None:intergenic |
| ATTTCCACTTCTAGTTTGTG+GGG | 0.568670 | 3.4:+98977756 | MS.gene66827:CDS |
| GGCAAAGATCCAATGGGAAG+AGG | 0.571287 | 3.4:+98981380 | MS.gene66827:CDS |
| TTAGGGCGGACAACTTCATA+GGG | 0.576553 | 3.4:-98977068 | None:intergenic |
| GCAGACTTGACTATCAGGCC+AGG | 0.579305 | 3.4:+98977640 | MS.gene66827:intron |
| GCAACACTTAACGAAGGAAA+GGG | 0.580045 | 3.4:+98977014 | MS.gene66827:CDS |
| GAAGGGCGAAAGTTTGACGT+TGG | 0.580960 | 3.4:+98977145 | MS.gene66827:CDS |
| GTGTCGCAGGTAGAGAATGC+AGG | 0.581081 | 3.4:+98976921 | MS.gene66827:intron |
| TCTTTCTCCTTATCCCGTGA+AGG | 0.581200 | 3.4:+98977265 | MS.gene66827:CDS |
| TTTACCTAAAGGCCTTGGGA+AGG | 0.581516 | 3.4:+98977127 | MS.gene66827:CDS |
| CAATCACCAAATCATTAATG+GGG | 0.584647 | 3.4:-98978014 | None:intergenic |
| GACCTTGGGTAATATTTGAG+CGG | 0.585756 | 3.4:-98981690 | None:intergenic |
| AGTTACAGAATAAGTTGCCA+AGG | 0.586321 | 3.4:-98977105 | None:intergenic |
| TAAACAGAATGAGCTCTTGG+TGG | 0.587661 | 3.4:-98977711 | None:intergenic |
| CCAAACAAGAAGTCCTGAAG+TGG | 0.588215 | 3.4:-98977952 | None:intergenic |
| ATTTACCATTCTATCCTCCC+AGG | 0.591306 | 3.4:+98976131 | MS.gene66827:CDS |
| AACTTTGAGCACCTTAAGAG+TGG | 0.594308 | 3.4:-98976374 | None:intergenic |
| CCGTTGCTAAAGAGTTGGTG+AGG | 0.595956 | 3.4:+98977453 | MS.gene66827:CDS |
| CAACTCTTTAGCAACGGCGA+AGG | 0.602379 | 3.4:-98977447 | None:intergenic |
| AACTTTGGTAAGGATGAGAT+CGG | 0.602673 | 3.4:-98976160 | None:intergenic |
| CATGGCGGTGCTCAGAGCAA+AGG | 0.603405 | 3.4:+98977533 | MS.gene66827:CDS |
| GATGAGATCGGAGAGGACCT+GGG | 0.604322 | 3.4:-98976148 | None:intergenic |
| AGCTCATTCTGTTTACTACA+GGG | 0.610364 | 3.4:+98977719 | MS.gene66827:CDS |
| GTCTGCATGCATGTAGACAA+TGG | 0.610818 | 3.4:-98981325 | None:intergenic |
| GATTGACACTCTTGTTGTGA+AGG | 0.615337 | 3.4:+98978032 | MS.gene66827:CDS |
| GGTGGAGGAAGTAATTGCTA+AGG | 0.617368 | 3.4:+98981816 | MS.gene66827:intron |
| GATCTGTACATTGCCCCAAT+GGG | 0.625357 | 3.4:-98977489 | None:intergenic |
| ATTTCATGATGACGATGATG+AGG | 0.626481 | 3.4:+98976079 | None:intergenic |
| AAGTGGCAACCCATATCCAA+TGG | 0.630677 | 3.4:-98977935 | None:intergenic |
| GGGAGATTGAGATATCCCAT+TGG | 0.633387 | 3.4:+98977474 | MS.gene66827:CDS |
| AGCCGCTCAAATATTACCCA+AGG | 0.639940 | 3.4:+98981688 | MS.gene66827:CDS |
| CGTTGCTAAAGAGTTGGTGA+GGG | 0.643300 | 3.4:+98977454 | MS.gene66827:CDS |
| ACTTAACGAAGGAAAGGGAA+AGG | 0.652066 | 3.4:+98977019 | MS.gene66827:CDS |
| TCCTGTGAAAGAAAGACATG+AGG | 0.667785 | 3.4:+98978421 | MS.gene66827:CDS |
| GCTCCCTGAGCATAGAAAGA+CGG | 0.670119 | 3.4:-98981260 | None:intergenic |
| GCTCAATGTTAAATTACCTG+AGG | 0.670175 | 3.4:+98977295 | MS.gene66827:CDS |
| AATCACCAAATCATTAATGG+GGG | 0.672170 | 3.4:-98978013 | None:intergenic |
| CCTCACCAACTCTTTAGCAA+CGG | 0.676013 | 3.4:-98977453 | None:intergenic |
| CCTTAAGAGTGGTAGTGGTG+CGG | 0.677361 | 3.4:-98976363 | None:intergenic |
| ATTGGCAGGTATGAGAATGG+AGG | 0.680768 | 3.4:-98977398 | None:intergenic |
| AAGAGGGAATATCTTTAGGG+CGG | 0.682262 | 3.4:-98977082 | None:intergenic |
| ATGTCAGCAACACTTAACGA+AGG | 0.697211 | 3.4:+98977008 | MS.gene66827:CDS |
| CTCGTTGAAAGAGCTCACAA+AGG | 0.716021 | 3.4:+98981625 | MS.gene66827:CDS |
| CATTATAATCTTGTTCATGG+CGG | 0.724346 | 3.4:+98977518 | MS.gene66827:CDS |
| CAGAACTTGAGATCGAACCT+CGG | 0.724721 | 3.4:+98977878 | MS.gene66827:CDS |
| GAGATTGAGATATCCCATTG+GGG | 0.726808 | 3.4:+98977476 | MS.gene66827:CDS |
| TGGTAAGGATGAGATCGGAG+AGG | 0.732813 | 3.4:-98976155 | None:intergenic |
| GAGATCGGAGAGGACCTGGG+AGG | 0.742940 | 3.4:-98976145 | None:intergenic |
| TGCATGCATGTAGACAATGG+AGG | 0.747749 | 3.4:-98981322 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTCATTTTATATTGT+TGG | - | chr3.4:98978691-98978710 | None:intergenic | 10.0% |
| !!! | AAATTATTTTCCATTTTTTA+TGG | - | chr3.4:98979869-98979888 | None:intergenic | 10.0% |
| !!! | TTATTTTATTTTTGTTTTTC+AGG | + | chr3.4:98981795-98981814 | MS.gene66827:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGTGT+GGG | + | chr3.4:98976413-98976432 | MS.gene66827:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGTG+TGG | + | chr3.4:98976412-98976431 | MS.gene66827:intron | 10.0% |
| !! | AAGAATAATAAATGTTGTAT+TGG | + | chr3.4:98978930-98978949 | MS.gene66827:intron | 15.0% |
| !!! | AAAGTTAAATTACAAAGTTT+TGG | - | chr3.4:98976463-98976482 | None:intergenic | 15.0% |
| !!! | AAATAATTTGAAATTTTTGC+TGG | + | chr3.4:98979880-98979899 | MS.gene66827:intron | 15.0% |
| !!! | ACAATTAGGTTATTTTATAT+CGG | - | chr3.4:98981021-98981040 | None:intergenic | 15.0% |
| !!! | ATATGATATTTGAAGTATTT+TGG | - | chr3.4:98979484-98979503 | None:intergenic | 15.0% |
| !!! | TTCAAGATACTTTTTTTTTT+TGG | + | chr3.4:98980194-98980213 | MS.gene66827:intron | 15.0% |
| !!! | TTTTTTTTGTACAAACAATT+AGG | - | chr3.4:98981035-98981054 | None:intergenic | 15.0% |
| !! | AAGAAAGTAAAATTATGTGT+TGG | - | chr3.4:98978080-98978099 | None:intergenic | 20.0% |
| !! | AGAATTGAAAAATCTTAGAT+CGG | - | chr3.4:98976243-98976262 | None:intergenic | 20.0% |
| !! | AGCTTGAAAATAGTTTATAA+TGG | + | chr3.4:98979181-98979200 | MS.gene66827:intron | 20.0% |
| !! | CAAAACTATTGAATACAAAA+TGG | + | chr3.4:98979736-98979755 | MS.gene66827:intron | 20.0% |
| !! | CCACTAACTATAATTAATAA+GGG | - | chr3.4:98978863-98978882 | None:intergenic | 20.0% |
| !! | GATTGAAATGCAATAAATAA+GGG | + | chr3.4:98978894-98978913 | MS.gene66827:intron | 20.0% |
| !! | TCCACTAACTATAATTAATA+AGG | - | chr3.4:98978864-98978883 | None:intergenic | 20.0% |
| !! | TCTTAAAAATAAGATGTTTG+TGG | - | chr3.4:98978727-98978746 | None:intergenic | 20.0% |
| !! | TGATTGAAATGCAATAAATA+AGG | + | chr3.4:98978893-98978912 | MS.gene66827:intron | 20.0% |
| !! | TTGTAACATTCCAATTAAAT+TGG | - | chr3.4:98980587-98980606 | None:intergenic | 20.0% |
| !!! | AAAAAACCCTTTTTTTTACA+TGG | - | chr3.4:98980690-98980709 | None:intergenic | 20.0% |
| !!! | AAAAACCCTTTTTTTTACAT+GGG | - | chr3.4:98980689-98980708 | None:intergenic | 20.0% |
| !!! | AATAAATAAGGGTATGTTAA+TGG | + | chr3.4:98978905-98978924 | MS.gene66827:intron | 20.0% |
| !!! | AATTCATTTTATATTGTTGG+TGG | - | chr3.4:98978688-98978707 | None:intergenic | 20.0% |
| !!! | ACTGGTTTTATTATTGAATT+GGG | + | chr3.4:98979080-98979099 | MS.gene66827:intron | 20.0% |
| !!! | ATTTGATTACTTTTTGTACA+GGG | + | chr3.4:98981171-98981190 | MS.gene66827:intron | 20.0% |
| !!! | CAATTAGGTTATTTTATATC+GGG | - | chr3.4:98981020-98981039 | None:intergenic | 20.0% |
| !!! | CTTTTAAAATGTGAACAATT+AGG | - | chr3.4:98981061-98981080 | None:intergenic | 20.0% |
| !!! | GTTTGATTTTGATTGAATTA+AGG | - | chr3.4:98979566-98979585 | None:intergenic | 20.0% |
| !!! | TACTGGTTTTATTATTGAAT+TGG | + | chr3.4:98979079-98979098 | MS.gene66827:intron | 20.0% |
| !!! | TGAACTTTAGTTTAAAAACT+TGG | + | chr3.4:98976717-98976736 | MS.gene66827:intron | 20.0% |
| !!! | TTTTATTTTTGTTTTTCAGG+TGG | + | chr3.4:98981798-98981817 | MS.gene66827:intron | 20.0% |
| ! | AAACATAACTCCAAATTCTA+AGG | + | chr3.4:98980417-98980436 | MS.gene66827:intron | 25.0% |
| ! | AACATAACTCCAAATTCTAA+GGG | + | chr3.4:98980418-98980437 | MS.gene66827:intron | 25.0% |
| ! | ACAAGAGATTTATGATCTTA+TGG | + | chr3.4:98981966-98981985 | MS.gene66827:CDS | 25.0% |
| ! | ACATAGATATCTATCATCTA+TGG | - | chr3.4:98978474-98978493 | None:intergenic | 25.0% |
| ! | ACATGATAAAATACAATGAC+AGG | + | chr3.4:98976652-98976671 | MS.gene66827:intron | 25.0% |
| ! | ACATTGCATTATTATATGCA+GGG | - | chr3.4:98980291-98980310 | None:intergenic | 25.0% |
| ! | CATGATAAAATACAATGACA+GGG | + | chr3.4:98976653-98976672 | MS.gene66827:intron | 25.0% |
| ! | CCAATGTAAAAAATCTAATC+TGG | + | chr3.4:98979247-98979266 | MS.gene66827:intron | 25.0% |
| ! | CCCTTATTAATTATAGTTAG+TGG | + | chr3.4:98978860-98978879 | MS.gene66827:intron | 25.0% |
| ! | GTAAGATACTAGATTGAATT+GGG | + | chr3.4:98980769-98980788 | MS.gene66827:intron | 25.0% |
| ! | TAATTAGTATTTATCGATGC+TGG | + | chr3.4:98976262-98976281 | MS.gene66827:intron | 25.0% |
| ! | TATGGAACTATAAATCAAGA+GGG | - | chr3.4:98981774-98981793 | None:intergenic | 25.0% |
| ! | TATTCTGTAACTTTACCTAA+AGG | + | chr3.4:98977116-98977135 | MS.gene66827:CDS | 25.0% |
| ! | TCAATCACCAAATCATTAAT+GGG | - | chr3.4:98978018-98978037 | None:intergenic | 25.0% |
| ! | TCTTTACTTGCAAATGATTA+TGG | + | chr3.4:98981428-98981447 | MS.gene66827:intron | 25.0% |
| ! | TGTAGGATACTAGATTTATT+GGG | + | chr3.4:98979954-98979973 | MS.gene66827:intron | 25.0% |
| ! | TTATGGAACTATAAATCAAG+AGG | - | chr3.4:98981775-98981794 | None:intergenic | 25.0% |
| ! | TTCTCAAAATGGATAACAAT+TGG | - | chr3.4:98977419-98977438 | None:intergenic | 25.0% |
| ! | TTGTAACCTACCATTTAATT+TGG | - | chr3.4:98979714-98979733 | None:intergenic | 25.0% |
| ! | TTGTAGGATACTAGATTTAT+TGG | + | chr3.4:98979953-98979972 | MS.gene66827:intron | 25.0% |
| !! | AAGTCTTCATTTCATCTTTT+AGG | + | chr3.4:98976194-98976213 | MS.gene66827:intron | 25.0% |
| !! | AGTCTTCATTTCATCTTTTA+GGG | + | chr3.4:98976195-98976214 | MS.gene66827:intron | 25.0% |
| !! | CTCTTTTCATTATGAAACTT+AGG | - | chr3.4:98979157-98979176 | None:intergenic | 25.0% |
| !! | GCTCTTTATAAACTATTTTC+AGG | - | chr3.4:98980952-98980971 | None:intergenic | 25.0% |
| !! | GTTGTATTGGTATTGTAAAA+GGG | + | chr3.4:98978943-98978962 | MS.gene66827:intron | 25.0% |
| !! | TGTCATTGTATTTTATCATG+TGG | - | chr3.4:98976653-98976672 | None:intergenic | 25.0% |
| !! | TGTTGTATTGGTATTGTAAA+AGG | + | chr3.4:98978942-98978961 | MS.gene66827:intron | 25.0% |
| !! | TTTGCAGTTTTCTTTTCTAT+TGG | + | chr3.4:98979125-98979144 | MS.gene66827:intron | 25.0% |
| !!! | CCAGATTAGATTTTTTACAT+TGG | - | chr3.4:98979250-98979269 | None:intergenic | 25.0% |
| !!! | GATTTGATTACTTTTTGTAC+AGG | + | chr3.4:98981170-98981189 | MS.gene66827:intron | 25.0% |
| !!! | TATTACTGTTGCATCTTTTT+TGG | + | chr3.4:98978631-98978650 | MS.gene66827:intron | 25.0% |
| !!! | TCATTATTTTGTTGCAAACT+TGG | + | chr3.4:98978108-98978127 | MS.gene66827:intron | 25.0% |
| !!! | TTTACCTGTATATTTTTCAG+AGG | + | chr3.4:98978179-98978198 | MS.gene66827:intron | 25.0% |
| !!! | TTTTTTTTTTTTGTGTGGGT+GGG | + | chr3.4:98976417-98976436 | MS.gene66827:intron | 25.0% |
| !!! | TTTTTTTTTTTTTGTGTGGG+TGG | + | chr3.4:98976416-98976435 | MS.gene66827:intron | 25.0% |
| AAAAAGTGGTTGAACAATAC+AGG | - | chr3.4:98980080-98980099 | None:intergenic | 30.0% | |
| AAAACCAGTACATGAAATTC+AGG | - | chr3.4:98979069-98979088 | None:intergenic | 30.0% | |
| AAGCCAGAAATCAACATTAA+CGG | - | chr3.4:98981285-98981304 | None:intergenic | 30.0% | |
| AATCACCAAATCATTAATGG+GGG | - | chr3.4:98978016-98978035 | None:intergenic | 30.0% | |
| AATTCAGAATCACAGAAACA+AGG | - | chr3.4:98977575-98977594 | None:intergenic | 30.0% | |
| ACCTTATAAGGTGAATAAGT+GGG | + | chr3.4:98980242-98980261 | MS.gene66827:intron | 30.0% | |
| AGATATCTATCATCTATGGT+TGG | - | chr3.4:98978470-98978489 | None:intergenic | 30.0% | |
| AGATCAATCTGCAAACAATA+GGG | - | chr3.4:98976328-98976347 | None:intergenic | 30.0% | |
| ATACTCGTGTAAAACTCAAA+AGG | - | chr3.4:98978781-98978800 | None:intergenic | 30.0% | |
| ATATCCTGAATTTCATGTAC+TGG | + | chr3.4:98979062-98979081 | MS.gene66827:intron | 30.0% | |
| ATCTAACCTTCATACTTAGA+TGG | - | chr3.4:98981113-98981132 | None:intergenic | 30.0% | |
| ATCTATGTCATTCCATTGTT+TGG | + | chr3.4:98978486-98978505 | MS.gene66827:intron | 30.0% | |
| CAAAACAGCTCCAAATTAAA+TGG | + | chr3.4:98979701-98979720 | MS.gene66827:intron | 30.0% | |
| CAATCACCAAATCATTAATG+GGG | - | chr3.4:98978017-98978036 | None:intergenic | 30.0% | |
| CATTATAATCTTGTTCATGG+CGG | + | chr3.4:98977518-98977537 | MS.gene66827:CDS | 30.0% | |
| CATTGCATTATTATATGCAG+GGG | - | chr3.4:98980290-98980309 | None:intergenic | 30.0% | |
| CGTAAGATACTAGATTGAAT+TGG | + | chr3.4:98980768-98980787 | MS.gene66827:intron | 30.0% | |
| CTGGAAAATACAAAACTTCA+GGG | + | chr3.4:98977341-98977360 | MS.gene66827:CDS | 30.0% | |
| CTTTGTCTGCAACAATTATA+TGG | - | chr3.4:98978526-98978545 | None:intergenic | 30.0% | |
| GACATTGCATTATTATATGC+AGG | - | chr3.4:98980292-98980311 | None:intergenic | 30.0% | |
| GAGCATTATAATCTTGTTCA+TGG | + | chr3.4:98977515-98977534 | MS.gene66827:CDS | 30.0% | |
| GATTGTTATGAGAAGAAGTT+AGG | + | chr3.4:98981886-98981905 | MS.gene66827:CDS | 30.0% | |
| GCATCAAAGGAAATAAGATA+AGG | - | chr3.4:98976865-98976884 | None:intergenic | 30.0% | |
| GGGAATAGTTCCAATTTAAT+TGG | + | chr3.4:98980574-98980593 | MS.gene66827:intron | 30.0% | |
| GTAATTTAACATTGAGCGAT+TGG | - | chr3.4:98977292-98977311 | None:intergenic | 30.0% | |
| GTCAATCACCAAATCATTAA+TGG | - | chr3.4:98978019-98978038 | None:intergenic | 30.0% | |
| GTCATTGTAGTATATTGTGT+AGG | + | chr3.4:98978310-98978329 | MS.gene66827:intron | 30.0% | |
| GTTGACCCTATAATATTTGA+CGG | + | chr3.4:98980631-98980650 | MS.gene66827:intron | 30.0% | |
| TACTCGTGTAAAACTCAAAA+GGG | - | chr3.4:98978780-98978799 | None:intergenic | 30.0% | |
| TAGATTGAATTGGGATACAT+GGG | + | chr3.4:98980778-98980797 | MS.gene66827:intron | 30.0% | |
| TCTAACCTTCATACTTAGAT+GGG | - | chr3.4:98981112-98981131 | None:intergenic | 30.0% | |
| TCTATGTCATTCCATTGTTT+GGG | + | chr3.4:98978487-98978506 | MS.gene66827:intron | 30.0% | |
| TGAAAGTTGAAAATAAGCCT+AGG | - | chr3.4:98979344-98979363 | None:intergenic | 30.0% | |
| TGATACACGATTCAAAAAAG+TGG | - | chr3.4:98980094-98980113 | None:intergenic | 30.0% | |
| TGGAAATGGTTGCAATATAT+GGG | - | chr3.4:98977189-98977208 | None:intergenic | 30.0% | |
| TTATAATAGACCTGCAATAC+AGG | - | chr3.4:98981234-98981253 | None:intergenic | 30.0% | |
| TTATTTGGCAAAGATCCAAT+GGG | + | chr3.4:98981374-98981393 | MS.gene66827:CDS | 30.0% | |
| TTCAAATGTCACAGTATTGT+AGG | + | chr3.4:98979937-98979956 | MS.gene66827:intron | 30.0% | |
| TTGACCCTATAATATTTGAC+GGG | + | chr3.4:98980632-98980651 | MS.gene66827:intron | 30.0% | |
| TTGTAACCAACCAGTTAATT+TGG | - | chr3.4:98979679-98979698 | None:intergenic | 30.0% | |
| ! | AATATTACCCAAGGTCATTT+TGG | + | chr3.4:98981697-98981716 | MS.gene66827:intron | 30.0% |
| ! | AGTTCCTCTGAAAAATATAC+AGG | - | chr3.4:98978186-98978205 | None:intergenic | 30.0% |
| ! | ATCAAGAGGGAAATTTTATG+TGG | - | chr3.4:98981761-98981780 | None:intergenic | 30.0% |
| !! | ACACTTTTGTTTCATCATTC+AGG | + | chr3.4:98981463-98981482 | MS.gene66827:intron | 30.0% |
| !! | ATATTTCCACTTCTAGTTTG+TGG | + | chr3.4:98977754-98977773 | MS.gene66827:CDS | 30.0% |
| !! | TATTTCCACTTCTAGTTTGT+GGG | + | chr3.4:98977755-98977774 | MS.gene66827:CDS | 30.0% |
| !!! | AAAAAAAGGGTTTTTTCTGC+CGG | + | chr3.4:98980694-98980713 | MS.gene66827:intron | 30.0% |
| !!! | TATTTTTGTTTTTCAGGTGG+AGG | + | chr3.4:98981801-98981820 | MS.gene66827:intron | 30.0% |
| !!! | TTTTTCCTGCTTTTTGTCAT+TGG | + | chr3.4:98978282-98978301 | MS.gene66827:intron | 30.0% |
| AAAGTAAATCGCAGCATCAA+AGG | - | chr3.4:98976878-98976897 | None:intergenic | 35.0% | |
| AACAACCAATGACAAAAAGC+AGG | - | chr3.4:98978290-98978309 | None:intergenic | 35.0% | |
| AACTTTGGTAAGGATGAGAT+CGG | - | chr3.4:98976163-98976182 | None:intergenic | 35.0% | |
| AAGGAAGAGGGAATATCTTT+AGG | - | chr3.4:98977089-98977108 | None:intergenic | 35.0% | |
| AAGTGCTTTACATGGTTATC+AGG | - | chr3.4:98976981-98977000 | None:intergenic | 35.0% | |
| AAGTTCTGTAGACAACAACA+TGG | - | chr3.4:98976609-98976628 | None:intergenic | 35.0% | |
| AATGGAGGAAGATTCTCATA+TGG | - | chr3.4:98977386-98977405 | None:intergenic | 35.0% | |
| ACAGCTCCAAATTAAATGGT+AGG | + | chr3.4:98979705-98979724 | MS.gene66827:intron | 35.0% | |
| ACCGACCCATGTAAAAAAAA+GGG | + | chr3.4:98980681-98980700 | MS.gene66827:intron | 35.0% | |
| ACTCACCTTCTATTCCTTTA+CGG | - | chr3.4:98979639-98979658 | None:intergenic | 35.0% | |
| AGCAACGACTAATGATACTA+TGG | - | chr3.4:98981511-98981530 | None:intergenic | 35.0% | |
| AGCTCATTCTGTTTACTACA+GGG | + | chr3.4:98977719-98977738 | MS.gene66827:CDS | 35.0% | |
| AGGAAGAGGGAATATCTTTA+GGG | - | chr3.4:98977088-98977107 | None:intergenic | 35.0% | |
| AGGGCTGATTATTCTCAAAA+TGG | - | chr3.4:98977430-98977449 | None:intergenic | 35.0% | |
| AGTTACAGAATAAGTTGCCA+AGG | - | chr3.4:98977108-98977127 | None:intergenic | 35.0% | |
| ATACGATATGAAAACAGCCA+TGG | - | chr3.4:98980856-98980875 | None:intergenic | 35.0% | |
| ATACTGGGTGTGATATTGAT+GGG | + | chr3.4:98980009-98980028 | MS.gene66827:intron | 35.0% | |
| ATAGCTCCAAATTAACTGGT+TGG | + | chr3.4:98979670-98979689 | MS.gene66827:intron | 35.0% | |
| ATTTATTGGGATATGCATCG+TGG | + | chr3.4:98979967-98979986 | MS.gene66827:intron | 35.0% | |
| ATTTCCCTCCTTACAAATTC+AGG | - | chr3.4:98979039-98979058 | None:intergenic | 35.0% | |
| CAAAATGGATAACAATTGGC+AGG | - | chr3.4:98977415-98977434 | None:intergenic | 35.0% | |
| CAAACTTGGAATGCAATCTT+TGG | + | chr3.4:98978122-98978141 | MS.gene66827:intron | 35.0% | |
| CAAATAAGATGCAGAAGTCT+TGG | - | chr3.4:98981361-98981380 | None:intergenic | 35.0% | |
| CAAGACTTCTGCATCTTATT+TGG | + | chr3.4:98981359-98981378 | MS.gene66827:CDS | 35.0% | |
| CACCTTATAAGGTGAATAAG+TGG | + | chr3.4:98980241-98980260 | MS.gene66827:intron | 35.0% | |
| CAGATCAATCTGCAAACAAT+AGG | - | chr3.4:98976329-98976348 | None:intergenic | 35.0% | |
| CAGGACTGTTCCATAAAAAA+TGG | + | chr3.4:98979856-98979875 | MS.gene66827:intron | 35.0% | |
| CAGGGATCTGAATTGAAATA+TGG | + | chr3.4:98977359-98977378 | MS.gene66827:CDS | 35.0% | |
| CCTTATAAGGTGAATAAGTG+GGG | + | chr3.4:98980243-98980262 | MS.gene66827:intron | 35.0% | |
| CTAGATTGAATTGGGATACA+TGG | + | chr3.4:98980777-98980796 | MS.gene66827:intron | 35.0% | |
| CTGGAAATGGTTGCAATATA+TGG | - | chr3.4:98977190-98977209 | None:intergenic | 35.0% | |
| CTTATTTGGCAAAGATCCAA+TGG | + | chr3.4:98981373-98981392 | MS.gene66827:CDS | 35.0% | |
| CTTTACATGGTTATCAGGAA+AGG | - | chr3.4:98976976-98976995 | None:intergenic | 35.0% | |
| GAGCAATTACATTTAGCAAG+TGG | - | chr3.4:98976834-98976853 | None:intergenic | 35.0% | |
| GAGGAAGGGAAATTGAAAAT+CGG | + | chr3.4:98981908-98981927 | MS.gene66827:CDS | 35.0% | |
| GCTCAATGTTAAATTACCTG+AGG | + | chr3.4:98977295-98977314 | MS.gene66827:CDS | 35.0% | |
| GCTGGAAAATACAAAACTTC+AGG | + | chr3.4:98977340-98977359 | MS.gene66827:CDS | 35.0% | |
| GGACTATAAAACCCAAACAA+TGG | - | chr3.4:98978501-98978520 | None:intergenic | 35.0% | |
| GGGAACCAAAAGAGATATTA+AGG | - | chr3.4:98977996-98978015 | None:intergenic | 35.0% | |
| GTCTGCAACAATTATATGGA+TGG | - | chr3.4:98978522-98978541 | None:intergenic | 35.0% | |
| GTGACCCGTCAAATATTATA+GGG | - | chr3.4:98980639-98980658 | None:intergenic | 35.0% | |
| GTGATCATGGTAGTCAAATT+GGG | + | chr3.4:98979393-98979412 | MS.gene66827:intron | 35.0% | |
| GTTAGTGTCCTGAATTTGTA+AGG | + | chr3.4:98979028-98979047 | MS.gene66827:intron | 35.0% | |
| GTTTACTACAGGGATGAAAT+CGG | + | chr3.4:98977729-98977748 | MS.gene66827:CDS | 35.0% | |
| TAAAGATATTCCCTCTTCCT+TGG | + | chr3.4:98977088-98977107 | MS.gene66827:CDS | 35.0% | |
| TAACTTTACCTAAAGGCCTT+GGG | + | chr3.4:98977123-98977142 | MS.gene66827:CDS | 35.0% | |
| TACCGACCCATGTAAAAAAA+AGG | + | chr3.4:98980680-98980699 | MS.gene66827:intron | 35.0% | |
| TACGATATGAAAACAGCCAT+GGG | - | chr3.4:98980855-98980874 | None:intergenic | 35.0% | |
| TAGTAAACAGAATGAGCTCT+TGG | - | chr3.4:98977717-98977736 | None:intergenic | 35.0% | |
| TATACTGGGTGTGATATTGA+TGG | + | chr3.4:98980008-98980027 | MS.gene66827:intron | 35.0% | |
| TGAAAATGCTCATTATGCTC+AGG | - | chr3.4:98978609-98978628 | None:intergenic | 35.0% | |
| TGAAATGAAGACTTACACGA+CGG | - | chr3.4:98976188-98976207 | None:intergenic | 35.0% | |
| TGACTTACTAATACATCTGC+CGG | + | chr3.4:98978335-98978354 | MS.gene66827:intron | 35.0% | |
| TGCAAACAATAGGGAAACAA+TGG | - | chr3.4:98976319-98976338 | None:intergenic | 35.0% | |
| TGGCTAGAATTCACCTTATA+AGG | + | chr3.4:98980230-98980249 | MS.gene66827:intron | 35.0% | |
| TGTATGCTAAGTGCTTTACA+TGG | - | chr3.4:98976989-98977008 | None:intergenic | 35.0% | |
| TGTCTTTCTTTCACAGGAAA+TGG | - | chr3.4:98978419-98978438 | None:intergenic | 35.0% | |
| TGTGACCCGTCAAATATTAT+AGG | - | chr3.4:98980640-98980659 | None:intergenic | 35.0% | |
| TGTGATCATGGTAGTCAAAT+TGG | + | chr3.4:98979392-98979411 | MS.gene66827:intron | 35.0% | |
| TGTTATGAGAAGAAGTTAGG+AGG | + | chr3.4:98981889-98981908 | MS.gene66827:CDS | 35.0% | |
| TTCATACTTGTGCAAATGAG+AGG | + | chr3.4:98976773-98976792 | MS.gene66827:intron | 35.0% | |
| TTTATTGGGATATGCATCGT+GGG | + | chr3.4:98979968-98979987 | MS.gene66827:intron | 35.0% | |
| ! | ACTTCCTCTTTTTCTCTCTA+CGG | - | chr3.4:98980516-98980535 | None:intergenic | 35.0% |
| ! | CGCTTCCTTAATATCTCTTT+TGG | + | chr3.4:98977988-98978007 | MS.gene66827:CDS | 35.0% |
| ! | GAAATATCTTTTGAACCCTC+TGG | - | chr3.4:98978386-98978405 | None:intergenic | 35.0% |
| ! | TGAGCATAATGAGCATTTTC+AGG | + | chr3.4:98978608-98978627 | MS.gene66827:CDS | 35.0% |
| ! | TTCAGAGGAACTAGAAGTAT+AGG | + | chr3.4:98978194-98978213 | MS.gene66827:intron | 35.0% |
| ! | TTTTCACACTTGGATATTGC+TGG | + | chr3.4:98978546-98978565 | MS.gene66827:CDS | 35.0% |
| !! | ACTGCTTTTACCATTGGATA+TGG | + | chr3.4:98977925-98977944 | MS.gene66827:CDS | 35.0% |
| !! | ATTTCCACTTCTAGTTTGTG+GGG | + | chr3.4:98977756-98977775 | MS.gene66827:CDS | 35.0% |
| !! | CTGCTTTTACCATTGGATAT+GGG | + | chr3.4:98977926-98977945 | MS.gene66827:CDS | 35.0% |
| !! | TGCGTAATTTTCTCTGGAAA+TGG | - | chr3.4:98977203-98977222 | None:intergenic | 35.0% |
| !! | TGGAAAACTGCTTTTACCAT+TGG | + | chr3.4:98977919-98977938 | MS.gene66827:CDS | 35.0% |
| !! | TGGCTGTTTTCATATCGTAT+CGG | + | chr3.4:98980856-98980875 | MS.gene66827:intron | 35.0% |
| !! | TGTATTTTCCAGCTTTGTGT+AGG | - | chr3.4:98977333-98977352 | None:intergenic | 35.0% |
| !!! | ACCCTTTTTTTTACATGGGT+CGG | - | chr3.4:98980685-98980704 | None:intergenic | 35.0% |
| !!! | CATTTTATATTGTTGGTGGC+TGG | - | chr3.4:98978684-98978703 | None:intergenic | 35.0% |
| !!! | CATTTTTTATGGAACAGTCC+TGG | - | chr3.4:98979858-98979877 | None:intergenic | 35.0% |
| !!! | TACTGTTGCATCTTTTTTGG+AGG | + | chr3.4:98978634-98978653 | MS.gene66827:intron | 35.0% |
| !!! | TGATTACTTTTTGTACAGGG+TGG | + | chr3.4:98981174-98981193 | MS.gene66827:intron | 35.0% |
| AAAATCGACGTGTAAGGTGA+GGG | - | chr3.4:98980981-98981000 | None:intergenic | 40.0% | |
| AACTTTGAGCACCTTAAGAG+TGG | - | chr3.4:98976377-98976396 | None:intergenic | 40.0% | |
| AAGCCATTCCAAAATGACCT+TGG | - | chr3.4:98981708-98981727 | None:intergenic | 40.0% | |
| AAGGGACACCTAATATGAGA+TGG | - | chr3.4:98978762-98978781 | None:intergenic | 40.0% | |
| AATAGAGTCCTACACAAAGC+TGG | + | chr3.4:98977322-98977341 | MS.gene66827:CDS | 40.0% | |
| ACAATTGGCAGGTATGAGAA+TGG | - | chr3.4:98977404-98977423 | None:intergenic | 40.0% | |
| ACATGGGTCGGTATTAGAAA+CGG | - | chr3.4:98980673-98980692 | None:intergenic | 40.0% | |
| ACCTCATGTCTTTCTTTCAC+AGG | - | chr3.4:98978425-98978444 | None:intergenic | 40.0% | |
| ACTAGCTGGATTTGTAAGGA+TGG | + | chr3.4:98979217-98979236 | MS.gene66827:intron | 40.0% | |
| ACTTAACGAAGGAAAGGGAA+AGG | + | chr3.4:98977019-98977038 | MS.gene66827:CDS | 40.0% | |
| AGAATAAGTTGCCAAGGAAG+AGG | - | chr3.4:98977102-98977121 | None:intergenic | 40.0% | |
| AGACACGACAACTAGAGAAA+AGG | + | chr3.4:98981139-98981158 | MS.gene66827:intron | 40.0% | |
| AGACCTACTAGTTGTGATCA+TGG | + | chr3.4:98979380-98979399 | MS.gene66827:intron | 40.0% | |
| AGAGAGAAAAAGAGGAAGTG+TGG | + | chr3.4:98980517-98980536 | MS.gene66827:intron | 40.0% | |
| AGATTTGCAGGAGAAGCTTA+TGG | + | chr3.4:98981843-98981862 | MS.gene66827:CDS | 40.0% | |
| AGCAACACTTAACGAAGGAA+AGG | + | chr3.4:98977013-98977032 | MS.gene66827:CDS | 40.0% | |
| AGCCATTCCAAAATGACCTT+GGG | - | chr3.4:98981707-98981726 | None:intergenic | 40.0% | |
| AGGTGGGATACTAACTATAC+TGG | + | chr3.4:98979993-98980012 | MS.gene66827:intron | 40.0% | |
| AGTGTCCTGAATTTGTAAGG+AGG | + | chr3.4:98979031-98979050 | MS.gene66827:intron | 40.0% | |
| AGTTGATTACCTCTTCCCAT+TGG | - | chr3.4:98981392-98981411 | None:intergenic | 40.0% | |
| ATACGTATCGTGGGATACAT+GGG | + | chr3.4:98980880-98980899 | MS.gene66827:intron | 40.0% | |
| ATCACAGAAACAAGGTAACC+TGG | - | chr3.4:98977567-98977586 | None:intergenic | 40.0% | |
| ATCAGCCCATCTAAGTATGA+AGG | + | chr3.4:98981104-98981123 | MS.gene66827:intron | 40.0% | |
| ATGAGAAGAAGTTAGGAGGA+AGG | + | chr3.4:98981893-98981912 | MS.gene66827:CDS | 40.0% | |
| ATGTCAGCAACACTTAACGA+AGG | + | chr3.4:98977008-98977027 | MS.gene66827:CDS | 40.0% | |
| ATTTACCATTCTATCCTCCC+AGG | + | chr3.4:98976131-98976150 | MS.gene66827:CDS | 40.0% | |
| ATTTGAACAAAGGCTTACGG+AGG | - | chr3.4:98976496-98976515 | None:intergenic | 40.0% | |
| CAAAACCCTAGAACAGAAAG+CGG | + | chr3.4:98980609-98980628 | MS.gene66827:intron | 40.0% | |
| CCCCACTTATTCACCTTATA+AGG | - | chr3.4:98980246-98980265 | None:intergenic | 40.0% | |
| CCTGCTATACATGGTCATTT+GGG | + | chr3.4:98980806-98980825 | MS.gene66827:intron | 40.0% | |
| CCTTACAAAATCGACGTGTA+AGG | - | chr3.4:98980987-98981006 | None:intergenic | 40.0% | |
| CTACCATGATCACAACTAGT+AGG | - | chr3.4:98979386-98979405 | None:intergenic | 40.0% | |
| CTAGGACAGGTGATATTCAA+GGG | + | chr3.4:98981573-98981592 | MS.gene66827:CDS | 40.0% | |
| CTCAAGCATGGTAGTCAAAT+CGG | + | chr3.4:98980045-98980064 | MS.gene66827:intron | 40.0% | |
| CTCTCTGCTCATTCACTAAT+GGG | - | chr3.4:98980450-98980469 | None:intergenic | 40.0% | |
| GAAACAGATCGTGTATGTGT+TGG | + | chr3.4:98979610-98979629 | MS.gene66827:intron | 40.0% | |
| GAAGACTGCAAAAATGTCAC+AGG | - | chr3.4:98981662-98981681 | None:intergenic | 40.0% | |
| GAATAAGTTGCCAAGGAAGA+GGG | - | chr3.4:98977101-98977120 | None:intergenic | 40.0% | |
| GAATTTCAGTTGCAGAAACC+AGG | - | chr3.4:98979920-98979939 | None:intergenic | 40.0% | |
| GACACCTAATATGAGATGGA+GGG | - | chr3.4:98978758-98978777 | None:intergenic | 40.0% | |
| GACACGACAACTAGAGAAAA+GGG | + | chr3.4:98981140-98981159 | MS.gene66827:intron | 40.0% | |
| GACCTTGGGTAATATTTGAG+CGG | - | chr3.4:98981693-98981712 | None:intergenic | 40.0% | |
| GAGATTGAGATATCCCATTG+GGG | + | chr3.4:98977476-98977495 | MS.gene66827:CDS | 40.0% | |
| GAGCTCATTCTGTTTACTAC+AGG | + | chr3.4:98977718-98977737 | MS.gene66827:CDS | 40.0% | |
| GCAACACTTAACGAAGGAAA+GGG | + | chr3.4:98977014-98977033 | MS.gene66827:CDS | 40.0% | |
| GCATTGAGAAAACTCAAGCA+TGG | + | chr3.4:98980033-98980052 | MS.gene66827:intron | 40.0% | |
| GCCATTTGAACAAAGGCTTA+CGG | - | chr3.4:98976499-98976518 | None:intergenic | 40.0% | |
| GGAGATTGAGATATCCCATT+GGG | + | chr3.4:98977475-98977494 | MS.gene66827:CDS | 40.0% | |
| GGGAAACAATGGTCAGAAAA+AGG | - | chr3.4:98976308-98976327 | None:intergenic | 40.0% | |
| GGGAATAGCTCCAAATTAAC+TGG | + | chr3.4:98979666-98979685 | MS.gene66827:intron | 40.0% | |
| GGTGGGATACTAACTATACT+GGG | + | chr3.4:98979994-98980013 | MS.gene66827:intron | 40.0% | |
| GGTTAAGTAGTTGCGAACAT+AGG | + | chr3.4:98976674-98976693 | MS.gene66827:intron | 40.0% | |
| GGTTCAAGCAACTATTCATC+AGG | + | chr3.4:98981484-98981503 | MS.gene66827:intron | 40.0% | |
| GTAAAGGAATAGAAGGTGAG+TGG | + | chr3.4:98979638-98979657 | MS.gene66827:intron | 40.0% | |
| GTAACTTTACCTAAAGGCCT+TGG | + | chr3.4:98977122-98977141 | MS.gene66827:CDS | 40.0% | |
| GTGTCCTGAATTTGTAAGGA+GGG | + | chr3.4:98979032-98979051 | MS.gene66827:intron | 40.0% | |
| GTGTTTCACTTGCAGAAACT+GGG | - | chr3.4:98980734-98980753 | None:intergenic | 40.0% | |
| TAAACAGAATGAGCTCTTGG+TGG | - | chr3.4:98977714-98977733 | None:intergenic | 40.0% | |
| TAAGGTGAATTCTAGCCACT+AGG | - | chr3.4:98980228-98980247 | None:intergenic | 40.0% | |
| TACTCCCTCCATCTCATATT+AGG | + | chr3.4:98978751-98978770 | MS.gene66827:intron | 40.0% | |
| TAGACCGTAGAGAGAAAAAG+AGG | + | chr3.4:98980509-98980528 | MS.gene66827:intron | 40.0% | |
| TATTATCTTCCTTGTGTCGC+AGG | + | chr3.4:98976908-98976927 | MS.gene66827:intron | 40.0% | |
| TCAAGCATGGTAGTCAAATC+GGG | + | chr3.4:98980046-98980065 | MS.gene66827:intron | 40.0% | |
| TCCGTAAGCCTTTGTTCAAA+TGG | + | chr3.4:98976495-98976514 | MS.gene66827:intron | 40.0% | |
| TCCTGTGAAAGAAAGACATG+AGG | + | chr3.4:98978421-98978440 | MS.gene66827:CDS | 40.0% | |
| TCTCTCTGCTCATTCACTAA+TGG | - | chr3.4:98980451-98980470 | None:intergenic | 40.0% | |
| TCTCTGCTCATTCACTAATG+GGG | - | chr3.4:98980449-98980468 | None:intergenic | 40.0% | |
| TGAGAAGAAGTTAGGAGGAA+GGG | + | chr3.4:98981894-98981913 | MS.gene66827:CDS | 40.0% | |
| TGGATTTGTAAGGATGGTGT+AGG | + | chr3.4:98979223-98979242 | MS.gene66827:intron | 40.0% | |
| TGGTTCCCCCATTAATGATT+TGG | + | chr3.4:98978008-98978027 | MS.gene66827:CDS | 40.0% | |
| TTCACAGGAAATGGAACAGA+TGG | - | chr3.4:98978410-98978429 | None:intergenic | 40.0% | |
| TTTGTGGGGTGACTCAAAAA+AGG | + | chr3.4:98977770-98977789 | MS.gene66827:CDS | 40.0% | |
| ! | AAGAGGGAATATCTTTAGGG+CGG | - | chr3.4:98977085-98977104 | None:intergenic | 40.0% |
| ! | AATAGAAGGTGAGTGGCTTT+TGG | + | chr3.4:98979645-98979664 | MS.gene66827:intron | 40.0% |
| ! | ACAAGAACGTGTGCAACTTT+TGG | + | chr3.4:98980553-98980572 | MS.gene66827:intron | 40.0% |
| ! | AGAGCAAAGGAGAATTTTCC+AGG | + | chr3.4:98977546-98977565 | MS.gene66827:CDS | 40.0% |
| ! | AGGAACTAGAAGTATAGGAC+AGG | + | chr3.4:98978199-98978218 | MS.gene66827:intron | 40.0% |
| ! | ATAGAAGGTGAGTGGCTTTT+GGG | + | chr3.4:98979646-98979665 | MS.gene66827:intron | 40.0% |
| ! | CAAGAACGTGTGCAACTTTT+GGG | + | chr3.4:98980554-98980573 | MS.gene66827:intron | 40.0% |
| ! | CACAGTTGTCTGTGAGTTTT+AGG | + | chr3.4:98976574-98976593 | MS.gene66827:intron | 40.0% |
| ! | GAGAGAAAAAGAGGAAGTGT+GGG | + | chr3.4:98980518-98980537 | MS.gene66827:intron | 40.0% |
| ! | GATTGACACTCTTGTTGTGA+AGG | + | chr3.4:98978032-98978051 | MS.gene66827:CDS | 40.0% |
| ! | GCAGACAAAGTTTTCACACT+TGG | + | chr3.4:98978536-98978555 | MS.gene66827:intron | 40.0% |
| ! | TCAGCTTGCGTAATTTTCTC+TGG | - | chr3.4:98977209-98977228 | None:intergenic | 40.0% |
| ! | TCTAGGACAGGTGATATTCA+AGG | + | chr3.4:98981572-98981591 | MS.gene66827:CDS | 40.0% |
| ! | TTTTCCAGCCACCAAAAAGT+GGG | - | chr3.4:98977906-98977925 | None:intergenic | 40.0% |
| !! | CGAGCTATCAACTGATTTTC+TGG | - | chr3.4:98981609-98981628 | None:intergenic | 40.0% |
| !! | GAGCCGTTAATGTTGATTTC+TGG | + | chr3.4:98981279-98981298 | MS.gene66827:CDS | 40.0% |
| !! | GGCTGTTTTCATATCGTATC+GGG | + | chr3.4:98980857-98980876 | MS.gene66827:intron | 40.0% |
| !! | TACCCAAGGTCATTTTGGAA+TGG | + | chr3.4:98981702-98981721 | MS.gene66827:intron | 40.0% |
| !! | TCATACTTAGATGGGCTGAT+GGG | - | chr3.4:98981104-98981123 | None:intergenic | 40.0% |
| !! | TTCATACTTAGATGGGCTGA+TGG | - | chr3.4:98981105-98981124 | None:intergenic | 40.0% |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | + | chr3.4:98980210-98980229 | MS.gene66827:intron | 40.0% |
| !!! | ACACCTATTTTTGAGACGGA+GGG | + | chr3.4:98979002-98979021 | MS.gene66827:intron | 40.0% |
| !!! | CCTTACACGTCGATTTTGTA+AGG | + | chr3.4:98980984-98981003 | MS.gene66827:intron | 40.0% |
| !!! | GACGACACCTATTTTTGAGA+CGG | + | chr3.4:98978998-98979017 | MS.gene66827:intron | 40.0% |
| AAATCCAGCTAGTGCGTTGA+GGG | - | chr3.4:98979210-98979229 | None:intergenic | 45.0% | |
| AAATCGACGTGTAAGGTGAG+GGG | - | chr3.4:98980980-98980999 | None:intergenic | 45.0% | |
| AACCTGAAAGTTGCAAGCAC+CGG | - | chr3.4:98978357-98978376 | None:intergenic | 45.0% | |
| AACTCTTTAGCAACGGCGAA+GGG | - | chr3.4:98977449-98977468 | None:intergenic | 45.0% | |
| AAGAAAACCGTGGGTGTTTG+GGG | + | chr3.4:98979798-98979817 | MS.gene66827:intron | 45.0% | |
| AAGCCTAGGCTAGTACTACT+GGG | - | chr3.4:98979330-98979349 | None:intergenic | 45.0% | |
| AAGTGGCAACCCATATCCAA+TGG | - | chr3.4:98977938-98977957 | None:intergenic | 45.0% | |
| ACAGACAACTGTGAAGTTCC+AGG | - | chr3.4:98976567-98976586 | None:intergenic | 45.0% | |
| ACGCACTAGCTGGATTTGTA+AGG | + | chr3.4:98979213-98979232 | MS.gene66827:intron | 45.0% | |
| ACTCCCTCCGTCTCAAAAAT+AGG | - | chr3.4:98979008-98979027 | None:intergenic | 45.0% | |
| ACTTACACGACGGTCAACTT+TGG | - | chr3.4:98976178-98976197 | None:intergenic | 45.0% | |
| AGCCGCTCAAATATTACCCA+AGG | + | chr3.4:98981688-98981707 | MS.gene66827:CDS | 45.0% | |
| AGTTGCGAACATAGGCTTAG+AGG | + | chr3.4:98976682-98976701 | MS.gene66827:intron | 45.0% | |
| ATATGCATCGTGGGATAGGT+GGG | + | chr3.4:98979977-98979996 | MS.gene66827:intron | 45.0% | |
| ATGTGTCCAGCCTAGCAATA+TGG | - | chr3.4:98976529-98976548 | None:intergenic | 45.0% | |
| ATTATTATATGCAGGGGCCG+GGG | - | chr3.4:98980284-98980303 | None:intergenic | 45.0% | |
| ATTGAGCGATTGGACCTTCA+CGG | - | chr3.4:98977282-98977301 | None:intergenic | 45.0% | |
| ATTGGCAGGTATGAGAATGG+AGG | - | chr3.4:98977401-98977420 | None:intergenic | 45.0% | |
| CAAAATCGACGTGTAAGGTG+AGG | - | chr3.4:98980982-98981001 | None:intergenic | 45.0% | |
| CAACCGTCTTTCTATGCTCA+GGG | + | chr3.4:98981257-98981276 | MS.gene66827:CDS | 45.0% | |
| CAAGAAAACCGTGGGTGTTT+GGG | + | chr3.4:98979797-98979816 | MS.gene66827:intron | 45.0% | |
| CAGAACTTGAGATCGAACCT+CGG | + | chr3.4:98977878-98977897 | MS.gene66827:CDS | 45.0% | |
| CATCGTTGCGTGATCTTTCT+AGG | + | chr3.4:98981555-98981574 | MS.gene66827:CDS | 45.0% | |
| CATGGGTCGGTATTAGAAAC+GGG | - | chr3.4:98980672-98980691 | None:intergenic | 45.0% | |
| CATTATTATATGCAGGGGCC+GGG | - | chr3.4:98980285-98980304 | None:intergenic | 45.0% | |
| CCAAACAAGAAGTCCTGAAG+TGG | - | chr3.4:98977955-98977974 | None:intergenic | 45.0% | |
| CCACTTCAGGACTTCTTGTT+TGG | + | chr3.4:98977952-98977971 | MS.gene66827:CDS | 45.0% | |
| CCATGGGCAAATACGTATCA+GGG | - | chr3.4:98980839-98980858 | None:intergenic | 45.0% | |
| CCCAAATGACCATGTATAGC+AGG | - | chr3.4:98980809-98980828 | None:intergenic | 45.0% | |
| CCTCACCAACTCTTTAGCAA+CGG | - | chr3.4:98977456-98977475 | None:intergenic | 45.0% | |
| CGTGTTTCACTTGCAGAAAC+TGG | - | chr3.4:98980735-98980754 | None:intergenic | 45.0% | |
| CTCGTTGAAAGAGCTCACAA+AGG | + | chr3.4:98981625-98981644 | MS.gene66827:CDS | 45.0% | |
| GATACGTATCGTGGGATACA+TGG | + | chr3.4:98980879-98980898 | MS.gene66827:intron | 45.0% | |
| GATCTGTACATTGCCCCAAT+GGG | - | chr3.4:98977492-98977511 | None:intergenic | 45.0% | |
| GCAGATGCACCTCTTACATA+TGG | - | chr3.4:98977666-98977685 | None:intergenic | 45.0% | |
| GCATTATTATATGCAGGGGC+CGG | - | chr3.4:98980286-98980305 | None:intergenic | 45.0% | |
| GCCTGCTATACATGGTCATT+TGG | + | chr3.4:98980805-98980824 | MS.gene66827:intron | 45.0% | |
| GCGAAATCATCTTCTGGTGT+TGG | + | chr3.4:98977041-98977060 | MS.gene66827:CDS | 45.0% | |
| GGAAAGGCGAAATCATCTTC+TGG | + | chr3.4:98977035-98977054 | MS.gene66827:CDS | 45.0% | |
| GGAAGCCGTAAAGGAATAGA+AGG | + | chr3.4:98979631-98979650 | MS.gene66827:intron | 45.0% | |
| GGACACCTAATATGAGATGG+AGG | - | chr3.4:98978759-98978778 | None:intergenic | 45.0% | |
| GGGAGATTGAGATATCCCAT+TGG | + | chr3.4:98977474-98977493 | MS.gene66827:CDS | 45.0% | |
| GGTAATATTTGAGCGGCTTG+TGG | - | chr3.4:98981686-98981705 | None:intergenic | 45.0% | |
| GGTGGAGGAAGTAATTGCTA+AGG | + | chr3.4:98981816-98981835 | MS.gene66827:intron | 45.0% | |
| GTATGTGTTGGAAGCCGTAA+AGG | + | chr3.4:98979622-98979641 | MS.gene66827:intron | 45.0% | |
| GTCAACCGCTTTCTGTTCTA+GGG | - | chr3.4:98980617-98980636 | None:intergenic | 45.0% | |
| GTCTGCATGCATGTAGACAA+TGG | - | chr3.4:98981328-98981347 | None:intergenic | 45.0% | |
| TAAGCCTAGGCTAGTACTAC+TGG | - | chr3.4:98979331-98979350 | None:intergenic | 45.0% | |
| TACGTATCGTGGGATACATG+GGG | + | chr3.4:98980881-98980900 | MS.gene66827:intron | 45.0% | |
| TAGGACTCTATTCTTGCCTC+AGG | - | chr3.4:98977314-98977333 | None:intergenic | 45.0% | |
| TAGGCTAGTACTACTGGGTT+GGG | - | chr3.4:98979325-98979344 | None:intergenic | 45.0% | |
| TCAACCGTCTTTCTATGCTC+AGG | + | chr3.4:98981256-98981275 | MS.gene66827:CDS | 45.0% | |
| TCTTTCTCCTTATCCCGTGA+AGG | + | chr3.4:98977265-98977284 | MS.gene66827:CDS | 45.0% | |
| TGAAGTTCCAGGTTTGAACC+CGG | - | chr3.4:98976556-98976575 | None:intergenic | 45.0% | |
| TGAGCATAACTCAGTTGGCA+GGG | - | chr3.4:98980314-98980333 | None:intergenic | 45.0% | |
| TGATCTGTACATTGCCCCAA+TGG | - | chr3.4:98977493-98977512 | None:intergenic | 45.0% | |
| TGCATGCATGTAGACAATGG+AGG | - | chr3.4:98981325-98981344 | None:intergenic | 45.0% | |
| TGCTAAGGAGAGAGATTTGC+AGG | + | chr3.4:98981831-98981850 | MS.gene66827:CDS | 45.0% | |
| TGTAACCCATCAGCTATTGC+AGG | - | chr3.4:98979766-98979785 | None:intergenic | 45.0% | |
| TGTGTCCAGCCTAGCAATAT+GGG | - | chr3.4:98976528-98976547 | None:intergenic | 45.0% | |
| TTACCTAAAGGCCTTGGGAA+GGG | + | chr3.4:98977128-98977147 | MS.gene66827:CDS | 45.0% | |
| TTAGGGCGGACAACTTCATA+GGG | - | chr3.4:98977071-98977090 | None:intergenic | 45.0% | |
| TTATGGAACAGTCCTGGAAC+CGG | - | chr3.4:98979852-98979871 | None:intergenic | 45.0% | |
| TTCAGTTGCAGAAACCAGGT+CGG | - | chr3.4:98979916-98979935 | None:intergenic | 45.0% | |
| TTCTTCTCTAGCACGACAAC+AGG | - | chr3.4:98978576-98978595 | None:intergenic | 45.0% | |
| TTTACCTAAAGGCCTTGGGA+AGG | + | chr3.4:98977127-98977146 | MS.gene66827:CDS | 45.0% | |
| ! | CAAACACCCACGGTTTTCTT+GGG | - | chr3.4:98979798-98979817 | None:intergenic | 45.0% |
| ! | CAGGGTGGTTTGACTTTAGT+AGG | + | chr3.4:98981189-98981208 | MS.gene66827:intron | 45.0% |
| ! | GACTTCTTGTTTGGAGTCGA+TGG | + | chr3.4:98977961-98977980 | MS.gene66827:CDS | 45.0% |
| ! | GGGCATTGCCATTTGAACAA+AGG | - | chr3.4:98976506-98976525 | None:intergenic | 45.0% |
| ! | GTTTTCCAGCCACCAAAAAG+TGG | - | chr3.4:98977907-98977926 | None:intergenic | 45.0% |
| ! | TAAGAGGTGCATCTGCCTTT+AGG | + | chr3.4:98977670-98977689 | MS.gene66827:CDS | 45.0% |
| ! | TTTAGGGCGGACAACTTCAT+AGG | - | chr3.4:98977072-98977091 | None:intergenic | 45.0% |
| !! | CATACTTAGATGGGCTGATG+GGG | - | chr3.4:98981103-98981122 | None:intergenic | 45.0% |
| !! | CGTTGCTAAAGAGTTGGTGA+GGG | + | chr3.4:98977454-98977473 | MS.gene66827:CDS | 45.0% |
| !! | TTGCGTGATCTTTCTAGGAC+AGG | + | chr3.4:98981560-98981579 | MS.gene66827:CDS | 45.0% |
| !! | TTTCAGGTTGTCTTGCCAGA+GGG | + | chr3.4:98978368-98978387 | MS.gene66827:intron | 45.0% |
| !!! | GACACCTATTTTTGAGACGG+AGG | + | chr3.4:98979001-98979020 | MS.gene66827:intron | 45.0% |
| !! | AAACAAAAATAAAATAATTA+TGG | - | chr3.4:98981792-98981811 | None:intergenic | 5.0% |
| AACCTGACCCAAGAAAACCG+TGG | + | chr3.4:98979788-98979807 | MS.gene66827:intron | 50.0% | |
| ACCTGACCCAAGAAAACCGT+GGG | + | chr3.4:98979789-98979808 | MS.gene66827:intron | 50.0% | |
| CAAATCCAGCTAGTGCGTTG+AGG | - | chr3.4:98979211-98979230 | None:intergenic | 50.0% | |
| CAACTCTTTAGCAACGGCGA+AGG | - | chr3.4:98977450-98977469 | None:intergenic | 50.0% | |
| CACGACGGTCAACTTTGGTA+AGG | - | chr3.4:98976173-98976192 | None:intergenic | 50.0% | |
| CAGAAAACCCCAAACACCCA+CGG | - | chr3.4:98979808-98979827 | None:intergenic | 50.0% | |
| CATTCATCCGGGTTCAAACC+TGG | + | chr3.4:98976546-98976565 | MS.gene66827:intron | 50.0% | |
| CATTCGAGTCACCCACCAAA+AGG | + | chr3.4:98979291-98979310 | MS.gene66827:intron | 50.0% | |
| CATTCTCTACCTGCGACACA+AGG | - | chr3.4:98976920-98976939 | None:intergenic | 50.0% | |
| CCAACTGAGTTATGCTCACG+AGG | + | chr3.4:98980316-98980335 | MS.gene66827:intron | 50.0% | |
| CCAAGAAAACCGTGGGTGTT+TGG | + | chr3.4:98979796-98979815 | MS.gene66827:intron | 50.0% | |
| CCCTGATACGTATTTGCCCA+TGG | + | chr3.4:98980836-98980855 | MS.gene66827:intron | 50.0% | |
| CCTCGTGAGCATAACTCAGT+TGG | - | chr3.4:98980319-98980338 | None:intergenic | 50.0% | |
| CGTATCGGGATACGTATCGT+GGG | + | chr3.4:98980871-98980890 | MS.gene66827:intron | 50.0% | |
| CTAGGCTAGTACTACTGGGT+TGG | - | chr3.4:98979326-98979345 | None:intergenic | 50.0% | |
| CTAGGCTGGACACATTCATC+CGG | + | chr3.4:98976534-98976553 | MS.gene66827:intron | 50.0% | |
| CTGCTGCAGACTTGACTATC+AGG | + | chr3.4:98977635-98977654 | MS.gene66827:intron | 50.0% | |
| CTTCGCCGTTGCTAAAGAGT+TGG | + | chr3.4:98977448-98977467 | MS.gene66827:CDS | 50.0% | |
| CTTGGCAGTAAGACGCCTAA+AGG | - | chr3.4:98977688-98977707 | None:intergenic | 50.0% | |
| GAAGGGCGAAAGTTTGACGT+TGG | + | chr3.4:98977145-98977164 | MS.gene66827:CDS | 50.0% | |
| GAGCACCTTAAGAGTGGTAG+TGG | - | chr3.4:98976371-98976390 | None:intergenic | 50.0% | |
| GAGCAGAGAGAAACAGAGCA+TGG | + | chr3.4:98980460-98980479 | MS.gene66827:intron | 50.0% | |
| GATATGCATCGTGGGATAGG+TGG | + | chr3.4:98979976-98979995 | MS.gene66827:intron | 50.0% | |
| GATTGGACCTTCACGGGATA+AGG | - | chr3.4:98977275-98977294 | None:intergenic | 50.0% | |
| GCCATGGGCAAATACGTATC+AGG | - | chr3.4:98980840-98980859 | None:intergenic | 50.0% | |
| GCTCCCTGAGCATAGAAAGA+CGG | - | chr3.4:98981263-98981282 | None:intergenic | 50.0% | |
| GGCAAAGATCCAATGGGAAG+AGG | + | chr3.4:98981380-98981399 | MS.gene66827:CDS | 50.0% | |
| GGGGCAGAACCCTTAGAATT+TGG | - | chr3.4:98980430-98980449 | None:intergenic | 50.0% | |
| GGTCAACCGCTTTCTGTTCT+AGG | - | chr3.4:98980618-98980637 | None:intergenic | 50.0% | |
| GTCACCCCACAAACTAGAAG+TGG | - | chr3.4:98977763-98977782 | None:intergenic | 50.0% | |
| GTGAGCATAACTCAGTTGGC+AGG | - | chr3.4:98980315-98980334 | None:intergenic | 50.0% | |
| GTGGGGTGACTCAAAAAAGG+TGG | + | chr3.4:98977773-98977792 | MS.gene66827:intron | 50.0% | |
| GTGTCCAGCCTAGCAATATG+GGG | - | chr3.4:98976527-98976546 | None:intergenic | 50.0% | |
| GTTCGCCTGCAATAGCTGAT+GGG | + | chr3.4:98979758-98979777 | MS.gene66827:intron | 50.0% | |
| TACTCTTGCGCCTGTATTGC+AGG | + | chr3.4:98981221-98981240 | MS.gene66827:intron | 50.0% | |
| TAGGCTGGACACATTCATCC+GGG | + | chr3.4:98976535-98976554 | MS.gene66827:intron | 50.0% | |
| TATGGAACAGTCCTGGAACC+GGG | - | chr3.4:98979851-98979870 | None:intergenic | 50.0% | |
| TCAAACTTTCGCCCTTCCCA+AGG | - | chr3.4:98977142-98977161 | None:intergenic | 50.0% | |
| TCACTTGCAGAAACTGGGTC+AGG | - | chr3.4:98980729-98980748 | None:intergenic | 50.0% | |
| TCAGTTGCAGAAACCAGGTC+GGG | - | chr3.4:98979915-98979934 | None:intergenic | 50.0% | |
| TCGTATCGGGATACGTATCG+TGG | + | chr3.4:98980870-98980889 | MS.gene66827:intron | 50.0% | |
| TGCACCTCTTACATATGGCC+TGG | - | chr3.4:98977661-98977680 | None:intergenic | 50.0% | |
| TGGGATACGCCTGCTATACA+TGG | + | chr3.4:98980797-98980816 | MS.gene66827:intron | 50.0% | |
| TGGGATATGCATCGTGGGAT+AGG | + | chr3.4:98979973-98979992 | MS.gene66827:intron | 50.0% | |
| TGGTAAGGATGAGATCGGAG+AGG | - | chr3.4:98976158-98976177 | None:intergenic | 50.0% | |
| TGTCCAGCCTAGCAATATGG+GGG | - | chr3.4:98976526-98976545 | None:intergenic | 50.0% | |
| TTGAGCGATTGGACCTTCAC+GGG | - | chr3.4:98977281-98977300 | None:intergenic | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr3.4:98980250-98980269 | MS.gene66827:intron | 50.0% |
| ! | CAACCCAGTAGTACTAGCCT+AGG | + | chr3.4:98979324-98979343 | MS.gene66827:intron | 50.0% |
| ! | CCAAACACCCACGGTTTTCT+TGG | - | chr3.4:98979799-98979818 | None:intergenic | 50.0% |
| ! | TGGATATGGGTTGCCACTTC+AGG | + | chr3.4:98977939-98977958 | MS.gene66827:CDS | 50.0% |
| ! | TTTGACGGGTCACACAATCC+CGG | + | chr3.4:98980646-98980665 | MS.gene66827:intron | 50.0% |
| !! | CCGTTGCTAAAGAGTTGGTG+AGG | + | chr3.4:98977453-98977472 | MS.gene66827:CDS | 50.0% |
| !! | CCTTAAGAGTGGTAGTGGTG+CGG | - | chr3.4:98976366-98976385 | None:intergenic | 50.0% |
| !! | CTTTCAGGTTGTCTTGCCAG+AGG | + | chr3.4:98978367-98978386 | MS.gene66827:intron | 50.0% |
| !! | CTTTTGGTGGGTGACTCGAA+TGG | - | chr3.4:98979293-98979312 | None:intergenic | 50.0% |
| !! | GAACCTCGGTACCCACTTTT+TGG | + | chr3.4:98977892-98977911 | MS.gene66827:CDS | 50.0% |
| !! | GGTGTTTGGGGTTTTCTGGA+GGG | + | chr3.4:98979810-98979829 | MS.gene66827:intron | 50.0% |
| ATGCCCCCATATTGCTAGGC+TGG | + | chr3.4:98976520-98976539 | MS.gene66827:intron | 55.0% | |
| CAGGCCAGGCCATATGTAAG+AGG | + | chr3.4:98977654-98977673 | MS.gene66827:CDS | 55.0% | |
| CCGCACCACTACCACTCTTA+AGG | + | chr3.4:98976363-98976382 | MS.gene66827:CDS | 55.0% | |
| GAGGACCTGGGAGGATAGAA+TGG | - | chr3.4:98976139-98976158 | None:intergenic | 55.0% | |
| GATGAGATCGGAGAGGACCT+GGG | - | chr3.4:98976151-98976170 | None:intergenic | 55.0% | |
| GCAGACTTGACTATCAGGCC+AGG | + | chr3.4:98977640-98977659 | MS.gene66827:intron | 55.0% | |
| GGCAATGCCCCCATATTGCT+AGG | + | chr3.4:98976516-98976535 | MS.gene66827:intron | 55.0% | |
| GGTCGGTATTAGAAACGGGC+CGG | - | chr3.4:98980668-98980687 | None:intergenic | 55.0% | |
| GGTTCGCCTGCAATAGCTGA+TGG | + | chr3.4:98979757-98979776 | MS.gene66827:intron | 55.0% | |
| GTCGGTATTAGAAACGGGCC+GGG | - | chr3.4:98980667-98980686 | None:intergenic | 55.0% | |
| GTGTCGCAGGTAGAGAATGC+AGG | + | chr3.4:98976921-98976940 | MS.gene66827:intron | 55.0% | |
| TGCCGGTGCTTGCAACTTTC+AGG | + | chr3.4:98978352-98978371 | MS.gene66827:intron | 55.0% | |
| ! | ACCCACGGTTTTCTTGGGTC+AGG | - | chr3.4:98979793-98979812 | None:intergenic | 55.0% |
| ! | AGAAACTGGGTCAGGTTGCG+CGG | - | chr3.4:98980721-98980740 | None:intergenic | 55.0% |
| ! | ATGAGCTCTTGGTGGCAGCT+TGG | - | chr3.4:98977706-98977725 | None:intergenic | 55.0% |
| ! | CCACCAAAAAGTGGGTACCG+AGG | - | chr3.4:98977898-98977917 | None:intergenic | 55.0% |
| ! | GGGTGCATGGACCTTTTGGT+GGG | - | chr3.4:98979305-98979324 | None:intergenic | 55.0% |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr3.4:98980251-98980270 | MS.gene66827:intron | 55.0% |
| ! | GGTTGGGTGCATGGACCTTT+TGG | - | chr3.4:98979309-98979328 | None:intergenic | 55.0% |
| ! | GTACTACTGGGTTGGGTGCA+TGG | - | chr3.4:98979318-98979337 | None:intergenic | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr3.4:98980252-98980271 | MS.gene66827:intron | 55.0% |
| ! | TGGGTGCATGGACCTTTTGG+TGG | - | chr3.4:98979306-98979325 | None:intergenic | 55.0% |
| !! | CGTGGGTGTTTGGGGTTTTC+TGG | + | chr3.4:98979806-98979825 | MS.gene66827:intron | 55.0% |
| !! | CTTAGATGGGCTGATGGGGT+TGG | - | chr3.4:98981099-98981118 | None:intergenic | 55.0% |
| !! | GGGTGTTTGGGGTTTTCTGG+AGG | + | chr3.4:98979809-98979828 | MS.gene66827:intron | 55.0% |
| !!! | CCTCGGTACCCACTTTTTGG+TGG | + | chr3.4:98977895-98977914 | MS.gene66827:CDS | 55.0% |
| !!! | GGTACCCACTTTTTGGTGGC+TGG | + | chr3.4:98977899-98977918 | MS.gene66827:CDS | 55.0% |
| AACAGTCCTGGAACCGGGTC+GGG | - | chr3.4:98979846-98979865 | None:intergenic | 60.0% | |
| CATGGCGGTGCTCAGAGCAA+AGG | + | chr3.4:98977533-98977552 | MS.gene66827:CDS | 60.0% | |
| GAACAGTCCTGGAACCGGGT+CGG | - | chr3.4:98979847-98979866 | None:intergenic | 60.0% | |
| GCATCCCTCAACGCACTAGC+TGG | + | chr3.4:98979203-98979222 | MS.gene66827:intron | 60.0% | |
| GGATGAGATCGGAGAGGACC+TGG | - | chr3.4:98976152-98976171 | None:intergenic | 60.0% | |
| GGGTCATGCAAAACCCGACC+CGG | + | chr3.4:98979830-98979849 | MS.gene66827:intron | 60.0% | |
| GGTGGGTGACTCGAATGGAC+AGG | - | chr3.4:98979288-98979307 | None:intergenic | 60.0% | |
| TCGCCCTTCCCAAGGCCTTT+AGG | - | chr3.4:98977134-98977153 | None:intergenic | 60.0% | |
| GAGATCGGAGAGGACCTGGG+AGG | - | chr3.4:98976148-98976167 | None:intergenic | 65.0% | |
| GCAAAACCCGACCCGGTTCC+AGG | + | chr3.4:98979837-98979856 | MS.gene66827:intron | 65.0% | |
| ! | CTGGTTCGCACATCCCGACC+TGG | + | chr3.4:98979899-98979918 | MS.gene66827:intron | 65.0% |
| GGTGTCCGGGGTTCGAACCC+CGG | + | chr3.4:98980264-98980283 | MS.gene66827:intron | 70.0% | |
| ! | CTGGGTCAGGTTGCGCGGTC+CGG | - | chr3.4:98980716-98980735 | None:intergenic | 70.0% |
| AGGGGCCGGGGTTCGAACCC+CGG | - | chr3.4:98980272-98980291 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 98976084 | 98982008 | 98976084 | ID=MS.gene66827 |
| chr3.4 | mRNA | 98976084 | 98982008 | 98976084 | ID=MS.gene66827.t1;Parent=MS.gene66827 |
| chr3.4 | exon | 98976084 | 98976191 | 98976084 | ID=MS.gene66827.t1.exon1;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98976084 | 98976191 | 98976084 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98976340 | 98976384 | 98976340 | ID=MS.gene66827.t1.exon2;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98976340 | 98976384 | 98976340 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98976930 | 98977567 | 98976930 | ID=MS.gene66827.t1.exon3;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98976930 | 98977567 | 98976930 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98977644 | 98977791 | 98977644 | ID=MS.gene66827.t1.exon4;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98977644 | 98977791 | 98977644 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98977877 | 98978053 | 98977877 | ID=MS.gene66827.t1.exon5;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98977877 | 98978053 | 98977877 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98978374 | 98978442 | 98978374 | ID=MS.gene66827.t1.exon6;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98978374 | 98978442 | 98978374 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98978540 | 98978629 | 98978540 | ID=MS.gene66827.t1.exon7;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98978540 | 98978629 | 98978540 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98981243 | 98981401 | 98981243 | ID=MS.gene66827.t1.exon8;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98981243 | 98981401 | 98981243 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98981485 | 98981709 | 98981485 | ID=MS.gene66827.t1.exon9;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98981485 | 98981709 | 98981485 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| chr3.4 | exon | 98981817 | 98982008 | 98981817 | ID=MS.gene66827.t1.exon10;Parent=MS.gene66827.t1 |
| chr3.4 | CDS | 98981817 | 98982008 | 98981817 | ID=cds.MS.gene66827.t1;Parent=MS.gene66827.t1 |
| Gene Sequence |
| Protein sequence |
