Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61745.t1 | XP_003627883.1 | 97.5 | 279 | 7 | 0 | 23 | 301 | 156 | 434 | 9.50E-152 | 546.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61745.t1 | O04496 | 57.9 | 278 | 113 | 3 | 26 | 300 | 172 | 448 | 3.3e-84 | 313.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61745.t1 | G7LGR9 | 97.5 | 279 | 7 | 0 | 23 | 301 | 156 | 434 | 6.9e-152 | 546.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene61745 | 0.829637 | 4.61E-55 | -1.69E-46 |
| MS.gene051742 | MS.gene61745 | 0.816581 | 5.14E-52 | -1.69E-46 |
| MS.gene051914 | MS.gene61745 | 0.826864 | 2.15E-54 | -1.69E-46 |
| MS.gene052143 | MS.gene61745 | 0.823967 | 1.04E-53 | -1.69E-46 |
| MS.gene052169 | MS.gene61745 | 0.891087 | 5.47E-74 | -1.69E-46 |
| MS.gene052209 | MS.gene61745 | 0.821427 | 4.06E-53 | -1.69E-46 |
| MS.gene052308 | MS.gene61745 | 0.865203 | 7.00E-65 | -1.69E-46 |
| MS.gene052367 | MS.gene61745 | 0.86923 | 3.62E-66 | -1.69E-46 |
| MS.gene053173 | MS.gene61745 | 0.856938 | 2.29E-62 | -1.69E-46 |
| MS.gene053283 | MS.gene61745 | 0.823896 | 1.08E-53 | -1.69E-46 |
| MS.gene053348 | MS.gene61745 | 0.804554 | 2.04E-49 | -1.69E-46 |
| MS.gene054551 | MS.gene61745 | 0.859684 | 3.49E-63 | -1.69E-46 |
| MS.gene054593 | MS.gene61745 | 0.864416 | 1.23E-64 | -1.69E-46 |
| MS.gene054662 | MS.gene61745 | 0.854683 | 1.05E-61 | -1.69E-46 |
| MS.gene054941 | MS.gene61745 | 0.86485 | 9.04E-65 | -1.69E-46 |
| MS.gene055308 | MS.gene61745 | 0.872288 | 3.57E-67 | -1.69E-46 |
| MS.gene055578 | MS.gene61745 | 0.875439 | 3.08E-68 | -1.69E-46 |
| MS.gene055957 | MS.gene61745 | 0.83845 | 2.86E-57 | -1.69E-46 |
| MS.gene056041 | MS.gene61745 | 0.876369 | 1.48E-68 | -1.69E-46 |
| MS.gene05640 | MS.gene61745 | 0.846523 | 2.06E-59 | -1.69E-46 |
| MS.gene056526 | MS.gene61745 | 0.822779 | 1.97E-53 | -1.69E-46 |
| MS.gene056528 | MS.gene61745 | 0.832926 | 7.15E-56 | -1.69E-46 |
| MS.gene05652 | MS.gene61745 | 0.890703 | 7.75E-74 | -1.69E-46 |
| MS.gene05732 | MS.gene61745 | 0.806395 | 8.40E-50 | -1.69E-46 |
| MS.gene057367 | MS.gene61745 | 0.841056 | 5.99E-58 | -1.69E-46 |
| MS.gene057458 | MS.gene61745 | 0.854512 | 1.17E-61 | -1.69E-46 |
| MS.gene057669 | MS.gene61745 | 0.864592 | 1.09E-64 | -1.69E-46 |
| MS.gene058128 | MS.gene61745 | 0.841365 | 4.97E-58 | -1.69E-46 |
| MS.gene058849 | MS.gene61745 | 0.835178 | 1.95E-56 | -1.69E-46 |
| MS.gene058853 | MS.gene61745 | 0.869302 | 3.43E-66 | -1.69E-46 |
| MS.gene05926 | MS.gene61745 | 0.834485 | 2.92E-56 | -1.69E-46 |
| MS.gene059553 | MS.gene61745 | 0.801846 | 7.43E-49 | -1.69E-46 |
| MS.gene059616 | MS.gene61745 | 0.871077 | 8.99E-67 | -1.69E-46 |
| MS.gene060473 | MS.gene61745 | 0.848364 | 6.43E-60 | -1.69E-46 |
| MS.gene060565 | MS.gene61745 | 0.835877 | 1.30E-56 | -1.69E-46 |
| MS.gene06093 | MS.gene61745 | 0.869965 | 2.08E-66 | -1.69E-46 |
| MS.gene060985 | MS.gene61745 | 0.877392 | 6.52E-69 | -1.69E-46 |
| MS.gene061099 | MS.gene61745 | 0.836334 | 9.95E-57 | -1.69E-46 |
| MS.gene061260 | MS.gene61745 | 0.86199 | 6.96E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61745.t1 | MTR_8g039540 | 96.797 | 281 | 9 | 0 | 21 | 301 | 154 | 434 | 0.0 | 550 |
| MS.gene61745.t1 | MTR_3g014290 | 86.477 | 281 | 38 | 0 | 21 | 301 | 137 | 417 | 1.21e-168 | 474 |
| MS.gene61745.t1 | MTR_1g037630 | 86.477 | 281 | 38 | 0 | 21 | 301 | 149 | 429 | 4.19e-167 | 471 |
| MS.gene61745.t1 | MTR_3g100500 | 59.011 | 283 | 111 | 3 | 21 | 300 | 157 | 437 | 1.27e-97 | 294 |
| MS.gene61745.t1 | MTR_3g097150 | 32.534 | 292 | 170 | 11 | 25 | 300 | 166 | 446 | 6.63e-39 | 142 |
| MS.gene61745.t1 | MTR_4g007740 | 32.776 | 299 | 165 | 11 | 19 | 301 | 200 | 478 | 1.46e-37 | 139 |
| MS.gene61745.t1 | MTR_2g028190 | 35.616 | 292 | 156 | 14 | 27 | 300 | 174 | 451 | 1.22e-36 | 136 |
| MS.gene61745.t1 | MTR_1g111350 | 33.217 | 286 | 176 | 7 | 21 | 300 | 191 | 467 | 4.61e-34 | 129 |
| MS.gene61745.t1 | MTR_7g117430 | 34.926 | 272 | 167 | 4 | 35 | 300 | 217 | 484 | 7.16e-33 | 126 |
| MS.gene61745.t1 | MTR_1g115210 | 34.629 | 283 | 172 | 7 | 25 | 300 | 210 | 486 | 1.04e-32 | 126 |
| MS.gene61745.t1 | MTR_3g053710 | 32.384 | 281 | 167 | 10 | 28 | 295 | 191 | 461 | 1.15e-32 | 125 |
| MS.gene61745.t1 | MTR_4g100990 | 33.546 | 313 | 166 | 13 | 25 | 300 | 163 | 470 | 2.32e-32 | 125 |
| MS.gene61745.t1 | MTR_8g103880 | 28.105 | 306 | 203 | 9 | 3 | 300 | 158 | 454 | 5.01e-29 | 115 |
| MS.gene61745.t1 | MTR_6g085010 | 33.813 | 278 | 166 | 9 | 30 | 300 | 225 | 491 | 5.78e-28 | 113 |
| MS.gene61745.t1 | MTR_1g039270 | 32.975 | 279 | 172 | 7 | 30 | 300 | 198 | 469 | 6.85e-28 | 112 |
| MS.gene61745.t1 | MTR_5g012490 | 28.923 | 325 | 186 | 11 | 15 | 300 | 151 | 469 | 3.32e-27 | 110 |
| MS.gene61745.t1 | MTR_5g077850 | 27.551 | 294 | 187 | 11 | 25 | 301 | 154 | 438 | 1.41e-25 | 105 |
| MS.gene61745.t1 | MTR_3g046300 | 34.400 | 250 | 137 | 6 | 67 | 300 | 220 | 458 | 2.00e-25 | 105 |
| MS.gene61745.t1 | MTR_0036s0110 | 27.586 | 290 | 179 | 11 | 30 | 301 | 165 | 441 | 9.33e-24 | 100 |
| MS.gene61745.t1 | MTR_3g065160 | 28.223 | 287 | 177 | 12 | 35 | 301 | 150 | 427 | 1.21e-23 | 100 |
| MS.gene61745.t1 | MTR_3g053980 | 32.258 | 279 | 167 | 12 | 27 | 295 | 214 | 480 | 2.11e-23 | 100 |
| MS.gene61745.t1 | MTR_5g091130 | 31.010 | 287 | 173 | 9 | 35 | 300 | 271 | 553 | 7.88e-23 | 98.6 |
| MS.gene61745.t1 | MTR_7g062360 | 26.415 | 318 | 198 | 10 | 12 | 300 | 115 | 425 | 1.47e-22 | 97.4 |
| MS.gene61745.t1 | MTR_1g060750 | 28.169 | 284 | 180 | 12 | 30 | 301 | 104 | 375 | 5.10e-22 | 95.1 |
| MS.gene61745.t1 | MTR_7g105850 | 29.329 | 283 | 167 | 11 | 41 | 300 | 193 | 465 | 5.98e-20 | 90.1 |
| MS.gene61745.t1 | MTR_3g068000 | 26.645 | 304 | 174 | 11 | 35 | 300 | 149 | 441 | 2.02e-19 | 88.6 |
| MS.gene61745.t1 | MTR_2g059490 | 28.014 | 282 | 182 | 12 | 35 | 301 | 134 | 409 | 3.31e-19 | 87.8 |
| MS.gene61745.t1 | MTR_5g077920 | 28.472 | 288 | 174 | 13 | 35 | 301 | 151 | 427 | 1.21e-18 | 85.9 |
| MS.gene61745.t1 | MTR_2g084550 | 26.510 | 298 | 186 | 13 | 27 | 301 | 151 | 438 | 2.02e-18 | 85.5 |
| MS.gene61745.t1 | MTR_2g059460 | 27.660 | 282 | 178 | 13 | 35 | 301 | 135 | 405 | 2.06e-18 | 85.1 |
| MS.gene61745.t1 | MTR_5g016260 | 27.090 | 299 | 183 | 15 | 26 | 301 | 146 | 432 | 1.03e-17 | 83.6 |
| MS.gene61745.t1 | MTR_5g016260 | 27.090 | 299 | 183 | 15 | 26 | 301 | 146 | 432 | 1.17e-17 | 83.6 |
| MS.gene61745.t1 | MTR_5g008110 | 31.228 | 285 | 166 | 14 | 35 | 301 | 142 | 414 | 5.69e-17 | 80.9 |
| MS.gene61745.t1 | MTR_0024s0040 | 31.449 | 283 | 165 | 12 | 35 | 301 | 140 | 409 | 7.61e-17 | 80.5 |
| MS.gene61745.t1 | MTR_2g055840 | 27.797 | 295 | 182 | 9 | 30 | 300 | 86 | 373 | 1.30e-16 | 79.7 |
| MS.gene61745.t1 | MTR_0036s0070 | 25.965 | 285 | 181 | 11 | 30 | 301 | 158 | 425 | 1.99e-16 | 79.3 |
| MS.gene61745.t1 | MTR_8g096990 | 26.429 | 280 | 183 | 10 | 35 | 301 | 161 | 430 | 2.40e-16 | 79.3 |
| MS.gene61745.t1 | MTR_5g008090 | 28.723 | 282 | 178 | 11 | 35 | 301 | 40 | 313 | 9.02e-16 | 76.6 |
| MS.gene61745.t1 | MTR_5g038360 | 29.630 | 297 | 184 | 13 | 21 | 301 | 148 | 435 | 2.16e-15 | 76.6 |
| MS.gene61745.t1 | MTR_5g080890 | 27.305 | 282 | 182 | 11 | 34 | 301 | 160 | 432 | 6.34e-15 | 75.1 |
| MS.gene61745.t1 | MTR_4g056420 | 27.152 | 302 | 178 | 16 | 27 | 301 | 151 | 437 | 7.30e-15 | 75.1 |
| MS.gene61745.t1 | MTR_0036s0050 | 25.952 | 289 | 182 | 11 | 30 | 301 | 161 | 434 | 8.67e-15 | 74.7 |
| MS.gene61745.t1 | MTR_8g038250 | 29.719 | 249 | 157 | 10 | 53 | 288 | 158 | 401 | 1.21e-14 | 74.3 |
| MS.gene61745.t1 | MTR_7g102750 | 26.712 | 292 | 174 | 15 | 35 | 301 | 165 | 441 | 1.84e-14 | 73.9 |
| MS.gene61745.t1 | MTR_5g080960 | 26.950 | 282 | 183 | 11 | 34 | 301 | 160 | 432 | 1.94e-14 | 73.6 |
| MS.gene61745.t1 | MTR_7g021510 | 27.126 | 247 | 158 | 9 | 67 | 301 | 198 | 434 | 4.28e-14 | 72.8 |
| MS.gene61745.t1 | MTR_7g080230 | 27.241 | 290 | 178 | 14 | 34 | 301 | 153 | 431 | 4.31e-13 | 69.7 |
| MS.gene61745.t1 | MTR_7g080230 | 27.241 | 290 | 178 | 14 | 34 | 301 | 83 | 361 | 4.34e-13 | 69.3 |
| MS.gene61745.t1 | MTR_1g078240 | 26.246 | 301 | 186 | 16 | 26 | 301 | 142 | 431 | 5.50e-13 | 69.3 |
| MS.gene61745.t1 | MTR_1g061940 | 26.400 | 250 | 155 | 12 | 67 | 301 | 210 | 445 | 7.13e-13 | 68.9 |
| MS.gene61745.t1 | MTR_1g078240 | 26.910 | 301 | 183 | 17 | 26 | 301 | 142 | 430 | 8.01e-13 | 68.9 |
| MS.gene61745.t1 | MTR_5g044570 | 29.057 | 265 | 157 | 11 | 53 | 301 | 161 | 410 | 2.49e-12 | 67.4 |
| MS.gene61745.t1 | MTR_5g022880 | 27.740 | 292 | 166 | 13 | 32 | 300 | 192 | 461 | 3.99e-12 | 67.0 |
| MS.gene61745.t1 | MTR_7g102750 | 29.536 | 237 | 134 | 13 | 35 | 249 | 165 | 390 | 4.67e-12 | 66.6 |
| MS.gene61745.t1 | MTR_1g072450 | 24.116 | 311 | 190 | 13 | 26 | 295 | 109 | 414 | 5.71e-12 | 66.2 |
| MS.gene61745.t1 | MTR_2g070430 | 27.876 | 226 | 143 | 8 | 82 | 293 | 227 | 446 | 9.01e-12 | 65.9 |
| MS.gene61745.t1 | MTR_2g022450 | 24.528 | 265 | 166 | 9 | 65 | 299 | 154 | 414 | 2.56e-11 | 64.3 |
| MS.gene61745.t1 | MTR_2g105300 | 25.448 | 279 | 180 | 12 | 31 | 293 | 109 | 375 | 2.56e-11 | 63.9 |
| MS.gene61745.t1 | MTR_1g072420 | 23.492 | 315 | 188 | 12 | 26 | 295 | 109 | 415 | 3.69e-11 | 63.9 |
| MS.gene61745.t1 | MTR_8g075010 | 25.862 | 290 | 169 | 14 | 33 | 300 | 184 | 449 | 3.93e-11 | 63.9 |
| MS.gene61745.t1 | MTR_5g061690 | 25.763 | 295 | 179 | 12 | 27 | 300 | 35 | 310 | 4.05e-11 | 63.5 |
| MS.gene61745.t1 | MTR_5g061690 | 25.763 | 295 | 179 | 12 | 27 | 300 | 174 | 449 | 4.06e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61745.t1 | AT3G54400 | 72.340 | 282 | 76 | 2 | 21 | 301 | 145 | 425 | 2.42e-147 | 421 |
| MS.gene61745.t1 | AT5G07030 | 72.183 | 284 | 76 | 2 | 21 | 301 | 172 | 455 | 4.12e-140 | 403 |
| MS.gene61745.t1 | AT1G09750 | 59.041 | 271 | 107 | 3 | 33 | 300 | 179 | 448 | 1.15e-106 | 318 |
| MS.gene61745.t1 | AT2G03200 | 32.986 | 288 | 162 | 9 | 34 | 300 | 181 | 458 | 6.46e-39 | 142 |
| MS.gene61745.t1 | AT5G10770 | 32.500 | 280 | 172 | 9 | 29 | 301 | 205 | 474 | 1.96e-35 | 133 |
| MS.gene61745.t1 | AT3G61820 | 34.058 | 276 | 168 | 5 | 35 | 300 | 212 | 483 | 1.00e-32 | 126 |
| MS.gene61745.t1 | AT3G25700 | 32.069 | 290 | 171 | 9 | 33 | 300 | 164 | 449 | 2.80e-31 | 121 |
| MS.gene61745.t1 | AT1G01300 | 33.333 | 276 | 166 | 7 | 35 | 300 | 217 | 484 | 9.40e-31 | 120 |
| MS.gene61745.t1 | AT1G79720 | 31.935 | 310 | 175 | 13 | 5 | 300 | 195 | 482 | 3.69e-30 | 119 |
| MS.gene61745.t1 | AT3G20015 | 31.250 | 304 | 198 | 5 | 3 | 300 | 172 | 470 | 7.85e-30 | 118 |
| MS.gene61745.t1 | AT1G25510 | 33.574 | 277 | 169 | 7 | 30 | 300 | 216 | 483 | 1.41e-29 | 117 |
| MS.gene61745.t1 | AT5G10760 | 34.050 | 279 | 167 | 7 | 28 | 300 | 197 | 464 | 4.24e-29 | 115 |
| MS.gene61745.t1 | AT5G45120 | 29.968 | 317 | 187 | 11 | 15 | 300 | 166 | 478 | 5.77e-29 | 115 |
| MS.gene61745.t1 | AT1G66180 | 29.412 | 289 | 171 | 14 | 35 | 301 | 150 | 427 | 2.00e-27 | 110 |
| MS.gene61745.t1 | AT3G18490 | 32.616 | 279 | 172 | 8 | 30 | 300 | 230 | 500 | 6.00e-26 | 107 |
| MS.gene61745.t1 | AT3G52500 | 30.769 | 286 | 167 | 11 | 41 | 301 | 189 | 468 | 4.52e-25 | 104 |
| MS.gene61745.t1 | AT5G37540 | 28.374 | 289 | 173 | 14 | 35 | 300 | 161 | 438 | 5.72e-24 | 101 |
| MS.gene61745.t1 | AT2G39710 | 29.897 | 291 | 168 | 11 | 35 | 295 | 141 | 425 | 7.90e-24 | 100 |
| MS.gene61745.t1 | AT2G42980 | 30.909 | 220 | 134 | 8 | 95 | 300 | 309 | 524 | 2.57e-23 | 100 |
| MS.gene61745.t1 | AT5G02190 | 31.818 | 264 | 145 | 9 | 67 | 300 | 184 | 442 | 1.39e-22 | 97.4 |
| MS.gene61745.t1 | AT3G59080 | 31.142 | 289 | 173 | 10 | 34 | 300 | 212 | 496 | 2.90e-22 | 97.1 |
| MS.gene61745.t1 | AT3G59080 | 31.142 | 289 | 173 | 10 | 34 | 300 | 248 | 532 | 3.62e-22 | 96.7 |
| MS.gene61745.t1 | AT3G12700 | 29.825 | 285 | 174 | 11 | 35 | 301 | 185 | 461 | 7.74e-22 | 95.5 |
| MS.gene61745.t1 | AT4G16563 | 28.783 | 337 | 185 | 13 | 15 | 300 | 159 | 491 | 1.38e-20 | 92.0 |
| MS.gene61745.t1 | AT4G30030 | 28.926 | 242 | 153 | 9 | 67 | 300 | 189 | 419 | 1.29e-16 | 80.1 |
| MS.gene61745.t1 | AT2G23945 | 27.885 | 312 | 185 | 15 | 15 | 300 | 151 | 448 | 3.73e-16 | 79.0 |
| MS.gene61745.t1 | AT5G43100 | 25.084 | 299 | 188 | 15 | 27 | 301 | 132 | 418 | 7.51e-15 | 75.1 |
| MS.gene61745.t1 | AT5G43100 | 25.084 | 299 | 188 | 15 | 27 | 301 | 132 | 418 | 1.07e-14 | 74.7 |
| MS.gene61745.t1 | AT3G25700 | 37.594 | 133 | 71 | 4 | 176 | 300 | 219 | 347 | 3.00e-14 | 72.8 |
| MS.gene61745.t1 | AT2G36670 | 24.742 | 291 | 181 | 14 | 35 | 301 | 116 | 392 | 3.92e-14 | 72.8 |
| MS.gene61745.t1 | AT2G36670 | 24.742 | 291 | 181 | 14 | 35 | 301 | 116 | 392 | 3.92e-14 | 72.8 |
| MS.gene61745.t1 | AT2G36670 | 24.742 | 291 | 181 | 14 | 35 | 301 | 182 | 458 | 4.84e-14 | 72.8 |
| MS.gene61745.t1 | AT2G36670 | 24.742 | 291 | 181 | 14 | 35 | 301 | 187 | 463 | 5.80e-14 | 72.4 |
| MS.gene61745.t1 | AT1G05840 | 27.211 | 294 | 173 | 15 | 34 | 301 | 161 | 439 | 3.81e-13 | 70.1 |
| MS.gene61745.t1 | AT5G33340 | 25.283 | 265 | 177 | 9 | 35 | 287 | 166 | 421 | 7.80e-13 | 68.9 |
| MS.gene61745.t1 | AT4G35880 | 26.715 | 277 | 157 | 15 | 33 | 287 | 186 | 438 | 4.57e-12 | 66.6 |
| MS.gene61745.t1 | AT4G33490 | 26.351 | 296 | 166 | 15 | 33 | 296 | 132 | 407 | 1.50e-11 | 65.1 |
| MS.gene61745.t1 | AT2G28030 | 24.907 | 269 | 181 | 10 | 30 | 287 | 116 | 374 | 2.00e-11 | 64.3 |
| MS.gene61745.t1 | AT1G03230 | 26.115 | 314 | 190 | 14 | 26 | 299 | 107 | 418 | 2.77e-11 | 64.3 |
| MS.gene61745.t1 | AT1G03220 | 25.159 | 314 | 193 | 12 | 26 | 299 | 106 | 417 | 2.92e-11 | 64.3 |
| MS.gene61745.t1 | AT3G51330 | 26.871 | 294 | 162 | 15 | 35 | 300 | 185 | 453 | 4.44e-11 | 63.9 |
| MS.gene61745.t1 | AT3G51330 | 26.871 | 294 | 162 | 15 | 35 | 300 | 185 | 453 | 4.50e-11 | 63.5 |
Find 107 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGGACTTGTAGAGATTT+TGG | 0.241963 | 8.4:+58683313 | None:intergenic |
| CGAAGGGGCCATGGAGGTTC+TGG | 0.276479 | 8.4:-58685196 | None:intergenic |
| GTTATCGTTGGTACAACTAT+TGG | 0.296291 | 8.4:+58681987 | None:intergenic |
| TAATAGAGTGATGATCTTCT+AGG | 0.307781 | 8.4:+58683183 | None:intergenic |
| CCAAAAGTGTACCTTGGAAT+TGG | 0.323950 | 8.4:+58683423 | None:intergenic |
| TTTCTTACGGCGGTGTATAC+AGG | 0.325812 | 8.4:+58682083 | None:intergenic |
| TGTGCATTCAACTTCACTTA+TGG | 0.334737 | 8.4:-58683501 | MS.gene61745:CDS |
| TTTAAGTCGCCTAACTTTAG+TGG | 0.335521 | 8.4:-58683270 | MS.gene61745:CDS |
| AGGGTTGTCACAGGTAGTTT+TGG | 0.343997 | 8.4:+58682038 | None:intergenic |
| CAGGATGCTGCGTTTGGAAC+AGG | 0.344867 | 8.4:-58685149 | MS.gene61745:CDS |
| CAACACCGAGTTCACGTTAT+CGG | 0.358619 | 8.4:+58681866 | None:intergenic |
| GCACCACAACAGGGTCTATT+GGG | 0.360076 | 8.4:-58683372 | MS.gene61745:CDS |
| CCGAGGCCCATTGTCGCTCT+TGG | 0.369063 | 8.4:-58683343 | MS.gene61745:CDS |
| AACACCGAGTTCACGTTATC+GGG | 0.382498 | 8.4:+58681867 | None:intergenic |
| TTATCGTTGGTACAACTATT+GGG | 0.382986 | 8.4:+58681988 | None:intergenic |
| AGCACCACAACAGGGTCTAT+TGG | 0.384446 | 8.4:-58683373 | MS.gene61745:CDS |
| TTTCTACAGGATGCTGCGTT+TGG | 0.391260 | 8.4:-58685155 | MS.gene61745:CDS |
| CGCCGGTAGCACCACATGTT+TGG | 0.392098 | 8.4:-58681904 | MS.gene61745:CDS |
| GGTCTATTGGGCTTGGGCCG+AGG | 0.393741 | 8.4:-58683360 | MS.gene61745:CDS |
| TGGGGTATACTTGATCCTCT+TGG | 0.395670 | 8.4:+58683218 | None:intergenic |
| CCAATTCCAAGGTACACTTT+TGG | 0.404889 | 8.4:-58683423 | MS.gene61745:CDS |
| GATGTGCCCAACTCAAGAAT+TGG | 0.410152 | 8.4:-58681798 | MS.gene61745:CDS |
| GGCTGTGTTAACAAAACAAC+AGG | 0.414272 | 8.4:-58683402 | MS.gene61745:CDS |
| CGATATCCCTCCGGCTGCGC+TGG | 0.418711 | 8.4:-58683121 | MS.gene61745:CDS |
| GGGGTATACTTGATCCTCTT+GGG | 0.424317 | 8.4:+58683219 | None:intergenic |
| AGGAAGTTCAGCACCACAAC+AGG | 0.431654 | 8.4:-58683382 | MS.gene61745:CDS |
| TTTAGTGGGTCGTTGAGACT+TGG | 0.434229 | 8.4:-58683255 | MS.gene61745:CDS |
| TTCAACCCAACTACCGGTGC+TGG | 0.436030 | 8.4:-58683096 | MS.gene61745:CDS |
| CTTTGGGCCAAGAGCGACAA+TGG | 0.436884 | 8.4:+58683336 | None:intergenic |
| AACTTGGTTGCTATTAAAGT+TGG | 0.437202 | 8.4:-58683156 | MS.gene61745:CDS |
| CTTCCACCGCAAGTGGGGTT+GGG | 0.437902 | 8.4:+58683528 | None:intergenic |
| ATGGTTCCAGCACCGGTAGT+TGG | 0.439867 | 8.4:+58683090 | None:intergenic |
| GGGTTGAACGCCAGCGCAGC+CGG | 0.450344 | 8.4:+58683111 | None:intergenic |
| TGGTTCCAGCACCGGTAGTT+GGG | 0.453469 | 8.4:+58683091 | None:intergenic |
| GGCCAAACATGTGGTGCTAC+CGG | 0.458811 | 8.4:+58681902 | None:intergenic |
| ATCACTCTATTATGTTAACT+TGG | 0.460738 | 8.4:-58683172 | MS.gene61745:CDS |
| CAAAAGTGTACCTTGGAATT+GGG | 0.463126 | 8.4:+58683424 | None:intergenic |
| CTTCTAGGGTTTCTGAGAAG+TGG | 0.468084 | 8.4:+58683198 | None:intergenic |
| GCTTCCACCGCAAGTGGGGT+TGG | 0.468113 | 8.4:+58683527 | None:intergenic |
| TGAGGATGTTGTCTGGTGGT+AGG | 0.470698 | 8.4:+58681937 | None:intergenic |
| AACAATACCAATTCTTGAGT+TGG | 0.471847 | 8.4:+58681791 | None:intergenic |
| ACCACATGTTTGGCCATGGC+AGG | 0.475549 | 8.4:-58681894 | MS.gene61745:CDS |
| TTCTAGGGTTTCTGAGAAGT+GGG | 0.476620 | 8.4:+58683199 | None:intergenic |
| ACAATACCAATTCTTGAGTT+GGG | 0.478056 | 8.4:+58681792 | None:intergenic |
| CCAAGAGCGACAATGGGCCT+CGG | 0.482750 | 8.4:+58683343 | None:intergenic |
| ATCCTCTTGGGCTGATACAC+CGG | 0.486552 | 8.4:+58683231 | None:intergenic |
| TTGGAATTGGGTCAGTGGCT+AGG | 0.489050 | 8.4:+58683436 | None:intergenic |
| TGGCTAGGGTAAGTGTGTCT+TGG | 0.489193 | 8.4:+58683451 | None:intergenic |
| ACGATAACATTCTTGTTCTC+CGG | 0.489874 | 8.4:-58681972 | MS.gene61745:CDS |
| TGGAATTGGGTCAGTGGCTA+GGG | 0.491060 | 8.4:+58683437 | None:intergenic |
| ACAACAGGGTCTATTGGGCT+TGG | 0.499921 | 8.4:-58683367 | MS.gene61745:CDS |
| AAACGCAGCATCCTGTAGAA+AGG | 0.500106 | 8.4:+58685157 | None:intergenic |
| CAACAGGGTCTATTGGGCTT+GGG | 0.502732 | 8.4:-58683366 | MS.gene61745:CDS |
| TTGGACCACACTAGCTGCTA+TGG | 0.505139 | 8.4:+58683470 | None:intergenic |
| CTCAACGACCCACTAAAGTT+AGG | 0.505593 | 8.4:+58683261 | None:intergenic |
| AGCATGTGTCGAACCCTCCT+AGG | 0.506559 | 8.4:+58682018 | None:intergenic |
| GAGGATGTTGTCTGGTGGTA+GGG | 0.510247 | 8.4:+58681938 | None:intergenic |
| TTAAGTCGCCTAACTTTAGT+GGG | 0.511725 | 8.4:-58683269 | MS.gene61745:CDS |
| GCGCAAAGAACCCTTTCTAC+AGG | 0.514187 | 8.4:-58685168 | MS.gene61745:CDS |
| TTAGTGGGTCGTTGAGACTT+GGG | 0.514645 | 8.4:-58683254 | MS.gene61745:CDS |
| CTATGTATGAGGATGTTGTC+TGG | 0.515277 | 8.4:+58681930 | None:intergenic |
| AATAGAGTGATGATCTTCTA+GGG | 0.515833 | 8.4:+58683184 | None:intergenic |
| AACGCAGCATCCTGTAGAAA+GGG | 0.522137 | 8.4:+58685158 | None:intergenic |
| CGCTAGATCCAGAACCTCCA+TGG | 0.523342 | 8.4:+58685188 | None:intergenic |
| TTTGGGCCAAGAGCGACAAT+GGG | 0.530197 | 8.4:+58683337 | None:intergenic |
| TCGGCGAAACTCGTTTCTTA+CGG | 0.530256 | 8.4:+58682070 | None:intergenic |
| CACGCGCTTCCACCGCAAGT+GGG | 0.533182 | 8.4:+58683522 | None:intergenic |
| TGGGTCGTTGAGACTTGGGC+CGG | 0.534117 | 8.4:-58683250 | MS.gene61745:CDS |
| CTGGCGTTCAACCCAACTAC+CGG | 0.536552 | 8.4:-58683102 | MS.gene61745:CDS |
| TGGTTGCTATTAAAGTTGGC+CGG | 0.557965 | 8.4:-58683152 | MS.gene61745:CDS |
| TTCTTCCATAGCAGCTAGTG+TGG | 0.561075 | 8.4:-58683475 | MS.gene61745:CDS |
| AAACTACCTGTGACAACCCT+AGG | 0.568218 | 8.4:-58682035 | MS.gene61745:CDS |
| GTTATCGGGTGCTCCTGCCA+TGG | 0.574666 | 8.4:+58681881 | None:intergenic |
| AACGAGTTTCGCCGACGAGT+TGG | 0.576490 | 8.4:-58682062 | MS.gene61745:CDS |
| AAGTTAGGCGACTTAAAGCT+AGG | 0.577360 | 8.4:+58683276 | None:intergenic |
| AGGATGCTGCGTTTGGAACA+GGG | 0.581559 | 8.4:-58685148 | MS.gene61745:CDS |
| AACCCTCCTAGGGTTGTCAC+AGG | 0.582519 | 8.4:+58682029 | None:intergenic |
| TCCTGCCATGGCCAAACATG+TGG | 0.582611 | 8.4:+58681893 | None:intergenic |
| GCATGTGTCGAACCCTCCTA+GGG | 0.582815 | 8.4:+58682019 | None:intergenic |
| CTACCTGTGACAACCCTAGG+AGG | 0.586431 | 8.4:-58682032 | MS.gene61745:CDS |
| ACGCGCTTCCACCGCAAGTG+GGG | 0.589037 | 8.4:+58683523 | None:intergenic |
| ACACAGCCAAAAGTGTACCT+TGG | 0.590538 | 8.4:+58683417 | None:intergenic |
| TTGAACGCCAGCGCAGCCGG+AGG | 0.592132 | 8.4:+58683114 | None:intergenic |
| TAGCACCACATGTTTGGCCA+TGG | 0.594751 | 8.4:-58681898 | MS.gene61745:CDS |
| GAAAATCGTCGATATCCCTC+CGG | 0.600442 | 8.4:-58683130 | MS.gene61745:CDS |
| AGGCAAACAGTAAGAGAATG+TGG | 0.601674 | 8.4:+58683296 | None:intergenic |
| ACACGCGCTTCCACCGCAAG+TGG | 0.606518 | 8.4:+58683521 | None:intergenic |
| TGAACGCCAGCGCAGCCGGA+GGG | 0.607788 | 8.4:+58683115 | None:intergenic |
| ATCCTCATACATAGCACCGC+CGG | 0.613653 | 8.4:-58681921 | MS.gene61745:CDS |
| TGGTAGGGTTACATTCATGC+CGG | 0.624318 | 8.4:+58681953 | None:intergenic |
| GTACCTTGGAATTGGGTCAG+TGG | 0.625290 | 8.4:+58683431 | None:intergenic |
| GAGAACAAGAATGTTATCGT+TGG | 0.633329 | 8.4:+58681975 | None:intergenic |
| GTACCCAACCCCACTTGCGG+TGG | 0.634233 | 8.4:-58683531 | MS.gene61745:CDS |
| CAGGTACCCAACCCCACTTG+CGG | 0.634918 | 8.4:-58683534 | MS.gene61745:CDS |
| TACCGGCGGTGCTATGTATG+AGG | 0.638539 | 8.4:+58681919 | None:intergenic |
| TACCTGTGACAACCCTAGGA+GGG | 0.643334 | 8.4:-58682031 | MS.gene61745:CDS |
| TAGCCACTGACCCAATTCCA+AGG | 0.643632 | 8.4:-58683434 | MS.gene61745:CDS |
| AGCACCCGATAACGTGAACT+CGG | 0.644320 | 8.4:-58681871 | MS.gene61745:CDS |
| GCGAAACTCGTTTCTTACGG+CGG | 0.651651 | 8.4:+58682073 | None:intergenic |
| GGAAGTTCAGCACCACAACA+GGG | 0.652373 | 8.4:-58683381 | MS.gene61745:CDS |
| GGCCGGTGTATCAGCCCAAG+AGG | 0.653863 | 8.4:-58683233 | MS.gene61745:CDS |
| TCTAGGGTTTCTGAGAAGTG+GGG | 0.654621 | 8.4:+58683200 | None:intergenic |
| AAGCCCAATAGACCCTGTTG+TGG | 0.656487 | 8.4:+58683369 | None:intergenic |
| TGTATGAGGATGTTGTCTGG+TGG | 0.659104 | 8.4:+58681933 | None:intergenic |
| CAAACATGTGGTGCTACCGG+CGG | 0.675349 | 8.4:+58681905 | None:intergenic |
| TGGGCACATCAAATAGCACA+CGG | 0.733939 | 8.4:+58681811 | None:intergenic |
| GCACATCAAATAGCACACGG+TGG | 0.801608 | 8.4:+58681814 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATACTAATTTGTATTTA+AGG | - | chr8.4:58684754-58684773 | MS.gene61745:intron | 10.0% |
| !!! | ATATTGTTCAAATTTTTTTA+TGG | + | chr8.4:58682640-58682659 | None:intergenic | 10.0% |
| !! | AACAATAGTAATTAGTTAAA+TGG | - | chr8.4:58684671-58684690 | MS.gene61745:intron | 15.0% |
| !! | TAGATGTATAATTTCTTAAT+TGG | + | chr8.4:58683127-58683146 | None:intergenic | 15.0% |
| !! | TGTTTCTTTAATGAAAAAAA+TGG | + | chr8.4:58684561-58684580 | None:intergenic | 15.0% |
| !! | TTAGAAAATTTAAACCTAAT+TGG | - | chr8.4:58682567-58682586 | MS.gene61745:intron | 15.0% |
| !!! | ATTTTTTTCATTAAAGAAAC+AGG | - | chr8.4:58684560-58684579 | MS.gene61745:intron | 15.0% |
| !!! | TGTCTAAAAATTTAAGATTT+TGG | + | chr8.4:58682671-58682690 | None:intergenic | 15.0% |
| !!! | TTTTTGTTAATATTTCGTTA+TGG | + | chr8.4:58682440-58682459 | None:intergenic | 15.0% |
| !! | AATTACTATTGTTATATCCT+TGG | + | chr8.4:58684664-58684683 | None:intergenic | 20.0% |
| !! | ACTAACATATCAAATAACTT+TGG | - | chr8.4:58684080-58684099 | MS.gene61745:intron | 20.0% |
| !! | ATATTACAAAGTCATACATA+TGG | + | chr8.4:58684438-58684457 | None:intergenic | 20.0% |
| !! | TACATATACACTTTATTAGA+AGG | + | chr8.4:58681953-58681972 | None:intergenic | 20.0% |
| !! | TATATATACCTTCAAAACAT+GGG | - | chr8.4:58684279-58684298 | MS.gene61745:intron | 20.0% |
| !! | TCTCAAACAAAAAAAAACTT+TGG | - | chr8.4:58684027-58684046 | MS.gene61745:intron | 20.0% |
| !! | TTAAATGGTTTATACAATGT+CGG | - | chr8.4:58684686-58684705 | MS.gene61745:intron | 20.0% |
| !! | TTATATATACCTTCAAAACA+TGG | - | chr8.4:58684278-58684297 | MS.gene61745:intron | 20.0% |
| !! | TTTACCAAAATTATCCAATT+AGG | + | chr8.4:58682584-58682603 | None:intergenic | 20.0% |
| !!! | AAATAGCTTTTGGTTTTTTT+GGG | + | chr8.4:58683333-58683352 | None:intergenic | 20.0% |
| !!! | ATAGTTGAAAAGTTGATATA+TGG | - | chr8.4:58682462-58682481 | MS.gene61745:intron | 20.0% |
| !!! | ATCATTGTTATTTTCAACTT+TGG | - | chr8.4:58683991-58684010 | MS.gene61745:intron | 20.0% |
| !!! | ATTTGATAATGAACCAAATT+TGG | - | chr8.4:58682343-58682362 | MS.gene61745:intron | 20.0% |
| !!! | CAAAAAGTACAAAACATAAA+CGG | - | chr8.4:58683373-58683392 | MS.gene61745:CDS | 20.0% |
| !!! | GAAAAGTAATAAATAGCTTT+TGG | + | chr8.4:58683343-58683362 | None:intergenic | 20.0% |
| !!! | TAAACCTAATTGGATAATTT+TGG | - | chr8.4:58682577-58682596 | MS.gene61745:intron | 20.0% |
| !!! | TAAATAGCTTTTGGTTTTTT+TGG | + | chr8.4:58683334-58683353 | None:intergenic | 20.0% |
| !!! | TGTTCAAATTTTTTTATGGT+TGG | + | chr8.4:58682636-58682655 | None:intergenic | 20.0% |
| !!! | TTAATTTGTTTTCTTGCTAT+AGG | + | chr8.4:58682909-58682928 | None:intergenic | 20.0% |
| !!! | TTTATAGTTTTGAAAAGTGT+CGG | + | chr8.4:58682932-58682951 | None:intergenic | 20.0% |
| !!! | TTTATGTTTTGTACTTTTTG+TGG | + | chr8.4:58683373-58683392 | None:intergenic | 20.0% |
| !!! | TTTGTTTTGTAAAAAAGTGT+CGG | + | chr8.4:58683019-58683038 | None:intergenic | 20.0% |
| ! | AAACACACATGCATTATTAT+TGG | + | chr8.4:58684151-58684170 | None:intergenic | 25.0% |
| ! | AAATACACAAGATAAAACCT+AGG | + | chr8.4:58684242-58684261 | None:intergenic | 25.0% |
| ! | AATACACAAGATAAAACCTA+GGG | + | chr8.4:58684241-58684260 | None:intergenic | 25.0% |
| ! | ATATATACCTTCAAAACATG+GGG | - | chr8.4:58684280-58684299 | MS.gene61745:intron | 25.0% |
| ! | ATCACTCTATTATGTTAACT+TGG | - | chr8.4:58683787-58683806 | MS.gene61745:intron | 25.0% |
| ! | ATTAGTACCTGAATCAAAAA+TGG | + | chr8.4:58683891-58683910 | None:intergenic | 25.0% |
| ! | CATTATACATCAACCAAATT+TGG | + | chr8.4:58682359-58682378 | None:intergenic | 25.0% |
| ! | CTACTCTTACATGAAATATA+AGG | + | chr8.4:58682528-58682547 | None:intergenic | 25.0% |
| ! | TAATGAAAAAAATGGATGTG+CGG | + | chr8.4:58684553-58684572 | None:intergenic | 25.0% |
| ! | TGTTAATATTTCGTTATGGA+GGG | + | chr8.4:58682436-58682455 | None:intergenic | 25.0% |
| ! | TTATTCTAACTATGTTACCA+AGG | - | chr8.4:58684644-58684663 | MS.gene61745:intron | 25.0% |
| ! | TTGTTAATATTTCGTTATGG+AGG | + | chr8.4:58682437-58682456 | None:intergenic | 25.0% |
| !! | AAAACTTTGGACATGTATTT+TGG | - | chr8.4:58684040-58684059 | MS.gene61745:intron | 25.0% |
| !! | TATAAGCACCCTTTTATTAT+AGG | - | chr8.4:58682810-58682829 | MS.gene61745:intron | 25.0% |
| !! | TCAAACATGTGATATTTTTC+AGG | - | chr8.4:58683406-58683425 | MS.gene61745:CDS | 25.0% |
| !! | TTTTCTTGTTGAATATTACC+AGG | - | chr8.4:58684828-58684847 | MS.gene61745:intron | 25.0% |
| !!! | AATAGCTTTTGGTTTTTTTG+GGG | + | chr8.4:58683332-58683351 | None:intergenic | 25.0% |
| !!! | ATAAAAGGGTGCTTATATAT+AGG | + | chr8.4:58682807-58682826 | None:intergenic | 25.0% |
| !!! | ATGAATTAACTCTTTTTTGG+TGG | + | chr8.4:58682214-58682233 | None:intergenic | 25.0% |
| !!! | GATAATTTTGGTAAAGACTA+GGG | - | chr8.4:58682589-58682608 | MS.gene61745:intron | 25.0% |
| !!! | GATTATTAGTTTCTTTTCTC+TGG | - | chr8.4:58682104-58682123 | MS.gene61745:CDS | 25.0% |
| !!! | GTGATGAATTAACTCTTTTT+TGG | + | chr8.4:58682217-58682236 | None:intergenic | 25.0% |
| !!! | TAAAAGGGTGCTTATATATA+GGG | + | chr8.4:58682806-58682825 | None:intergenic | 25.0% |
| AACAATACCAATTCTTGAGT+TGG | + | chr8.4:58685171-58685190 | None:intergenic | 30.0% | |
| AATAGAGTGATGATCTTCTA+GGG | + | chr8.4:58683778-58683797 | None:intergenic | 30.0% | |
| ACAATACCAATTCTTGAGTT+GGG | + | chr8.4:58685170-58685189 | None:intergenic | 30.0% | |
| ACCCTTTGCCTATAATAAAA+GGG | + | chr8.4:58682821-58682840 | None:intergenic | 30.0% | |
| ACGTAATCTTGATCTCAAAA+TGG | + | chr8.4:58684505-58684524 | None:intergenic | 30.0% | |
| ATTCTCACGAAAAAACTAAG+TGG | - | chr8.4:58684333-58684352 | MS.gene61745:intron | 30.0% | |
| TAATAGAGTGATGATCTTCT+AGG | + | chr8.4:58683779-58683798 | None:intergenic | 30.0% | |
| TAATCTTGATCTCAAAATGG+TGG | + | chr8.4:58684502-58684521 | None:intergenic | 30.0% | |
| TATTATGCTTGACCAACAAA+GGG | - | chr8.4:58684179-58684198 | MS.gene61745:intron | 30.0% | |
| TCAATACTTACCTTTCCTAT+AGG | - | chr8.4:58683287-58683306 | MS.gene61745:CDS | 30.0% | |
| TGCAGATAGTATTATGTCTT+TGG | + | chr8.4:58682239-58682258 | None:intergenic | 30.0% | |
| TTATCGTTGGTACAACTATT+GGG | + | chr8.4:58684974-58684993 | None:intergenic | 30.0% | |
| TTCACTTAAGCTTATGCTAT+TGG | - | chr8.4:58682067-58682086 | MS.gene61745:CDS | 30.0% | |
| TTCTCACGAAAAAACTAAGT+GGG | - | chr8.4:58684334-58684353 | MS.gene61745:intron | 30.0% | |
| ! | AACTTGGTTGCTATTAAAGT+TGG | - | chr8.4:58683803-58683822 | MS.gene61745:intron | 30.0% |
| ! | AATTTTGGATCTTGCTAACA+AGG | - | chr8.4:58683084-58683103 | MS.gene61745:CDS | 30.0% |
| ! | ACCCTTTTATTATAGGCAAA+GGG | - | chr8.4:58682817-58682836 | MS.gene61745:intron | 30.0% |
| !! | GGATAATTTTGGTAAAGACT+AGG | - | chr8.4:58682588-58682607 | MS.gene61745:intron | 30.0% |
| !!! | ATCTTTTTTGCCTATAGGAA+AGG | + | chr8.4:58683300-58683319 | None:intergenic | 30.0% |
| !!! | TAAGCTGTTTTTGAAAGTGT+CGG | + | chr8.4:58682965-58682984 | None:intergenic | 30.0% |
| ACGATAACATTCTTGTTCTC+CGG | - | chr8.4:58684987-58685006 | MS.gene61745:intron | 35.0% | |
| CACCCTTTGCCTATAATAAA+AGG | + | chr8.4:58682822-58682841 | None:intergenic | 35.0% | |
| CGTGTGTGATGACAAAATTA+AGG | - | chr8.4:58684370-58684389 | MS.gene61745:intron | 35.0% | |
| CTATTATGCTTGACCAACAA+AGG | - | chr8.4:58684178-58684197 | MS.gene61745:intron | 35.0% | |
| GAGAACAAGAATGTTATCGT+TGG | + | chr8.4:58684987-58685006 | None:intergenic | 35.0% | |
| GTTATCGTTGGTACAACTAT+TGG | + | chr8.4:58684975-58684994 | None:intergenic | 35.0% | |
| TCATACGATTAATCTTCCCT+AGG | - | chr8.4:58684222-58684241 | MS.gene61745:intron | 35.0% | |
| TGTGCATTCAACTTCACTTA+TGG | - | chr8.4:58683458-58683477 | MS.gene61745:CDS | 35.0% | |
| TTAAGTCGCCTAACTTTAGT+GGG | - | chr8.4:58683690-58683709 | MS.gene61745:intron | 35.0% | |
| TTGATCTCAAAATGGTGGTT+GGG | + | chr8.4:58684497-58684516 | None:intergenic | 35.0% | |
| TTTAAGTCGCCTAACTTTAG+TGG | - | chr8.4:58683689-58683708 | MS.gene61745:intron | 35.0% | |
| ! | AGGGTGCTTATATATAAGGA+CGG | - | chr8.4:58682836-58682855 | MS.gene61745:intron | 35.0% |
| ! | ATGTGGACTTGTAGAGATTT+TGG | + | chr8.4:58683649-58683668 | None:intergenic | 35.0% |
| ! | CAAAAGTGTACCTTGGAATT+GGG | + | chr8.4:58683538-58683557 | None:intergenic | 35.0% |
| ! | CACCCTTTTATTATAGGCAA+AGG | - | chr8.4:58682816-58682835 | MS.gene61745:intron | 35.0% |
| !! | GCAAAGGGTGCTTATATATA+AGG | - | chr8.4:58682832-58682851 | MS.gene61745:intron | 35.0% |
| !! | TGCTTTTTGTACAAGACATG+TGG | + | chr8.4:58684474-58684493 | None:intergenic | 35.0% |
| !!! | ACTTGTAGAGATTTTGGCTT+TGG | + | chr8.4:58683643-58683662 | None:intergenic | 35.0% |
| !!! | CTTGTAGAGATTTTGGCTTT+GGG | + | chr8.4:58683642-58683661 | None:intergenic | 35.0% |
| !!! | TCGTGATCTTTTTTGCCTAT+AGG | + | chr8.4:58683305-58683324 | None:intergenic | 35.0% |
| AAGTTAGGCGACTTAAAGCT+AGG | + | chr8.4:58683686-58683705 | None:intergenic | 40.0% | |
| AGACTAGGGTAGATTCACAT+TGG | - | chr8.4:58682603-58682622 | MS.gene61745:intron | 40.0% | |
| AGGCAAACAGTAAGAGAATG+TGG | + | chr8.4:58683666-58683685 | None:intergenic | 40.0% | |
| ATCAAAAATGGTTCCAGCAC+CGG | + | chr8.4:58683879-58683898 | None:intergenic | 40.0% | |
| CTATGTATGAGGATGTTGTC+TGG | + | chr8.4:58685032-58685051 | None:intergenic | 40.0% | |
| CTTGATCTCAAAATGGTGGT+TGG | + | chr8.4:58684498-58684517 | None:intergenic | 40.0% | |
| GACTAGGGTAGATTCACATT+GGG | - | chr8.4:58682604-58682623 | MS.gene61745:intron | 40.0% | |
| GGCTGTGTTAACAAAACAAC+AGG | - | chr8.4:58683557-58683576 | MS.gene61745:intron | 40.0% | |
| TCAAAATCCTACACGTGACT+TGG | - | chr8.4:58684412-58684431 | MS.gene61745:intron | 40.0% | |
| TGCTTATATATAGGGACGGA+GGG | + | chr8.4:58682798-58682817 | None:intergenic | 40.0% | |
| ! | AGGGTGCTTATATATAGGGA+CGG | + | chr8.4:58682802-58682821 | None:intergenic | 40.0% |
| ! | CCAAAAGTGTACCTTGGAAT+TGG | + | chr8.4:58683539-58683558 | None:intergenic | 40.0% |
| ! | CCAATTCCAAGGTACACTTT+TGG | - | chr8.4:58683536-58683555 | MS.gene61745:intron | 40.0% |
| ! | TGGTTGCTATTAAAGTTGGC+CGG | - | chr8.4:58683807-58683826 | MS.gene61745:intron | 40.0% |
| !! | GCTGGAACCATTTTTGATTC+AGG | - | chr8.4:58683881-58683900 | MS.gene61745:intron | 40.0% |
| !! | GGAAAGGTAAGTATTGACGA+TGG | + | chr8.4:58683284-58683303 | None:intergenic | 40.0% |
| !! | TTCTAGGGTTTCTGAGAAGT+GGG | + | chr8.4:58683763-58683782 | None:intergenic | 40.0% |
| !!! | GTGGTTTTGTTGTTGCATGT+TGG | + | chr8.4:58685129-58685148 | None:intergenic | 40.0% |
| AAACGCAGCATCCTGTAGAA+AGG | + | chr8.4:58681805-58681824 | None:intergenic | 45.0% | |
| AAACTACCTGTGACAACCCT+AGG | - | chr8.4:58684924-58684943 | MS.gene61745:intron | 45.0% | |
| AACACCGAGTTCACGTTATC+GGG | + | chr8.4:58685095-58685114 | None:intergenic | 45.0% | |
| AACGCAGCATCCTGTAGAAA+GGG | + | chr8.4:58681804-58681823 | None:intergenic | 45.0% | |
| AGTCGAGTGAATACAGTACC+TGG | + | chr8.4:58684849-58684868 | None:intergenic | 45.0% | |
| CAACACCGAGTTCACGTTAT+CGG | + | chr8.4:58685096-58685115 | None:intergenic | 45.0% | |
| CACCTACTAGTTCCCTTTGT+TGG | + | chr8.4:58684194-58684213 | None:intergenic | 45.0% | |
| CTCAACGACCCACTAAAGTT+AGG | + | chr8.4:58683701-58683720 | None:intergenic | 45.0% | |
| GAAAATCGTCGATATCCCTC+CGG | - | chr8.4:58683829-58683848 | MS.gene61745:intron | 45.0% | |
| GACCAACAAAGGGAACTAGT+AGG | - | chr8.4:58684189-58684208 | MS.gene61745:intron | 45.0% | |
| GATGTGCCCAACTCAAGAAT+TGG | - | chr8.4:58685161-58685180 | MS.gene61745:CDS | 45.0% | |
| GGGGTATACTTGATCCTCTT+GGG | + | chr8.4:58683743-58683762 | None:intergenic | 45.0% | |
| GTGCTTATATATAGGGACGG+AGG | + | chr8.4:58682799-58682818 | None:intergenic | 45.0% | |
| TCGGCGAAACTCGTTTCTTA+CGG | + | chr8.4:58684892-58684911 | None:intergenic | 45.0% | |
| TGGGCACATCAAATAGCACA+CGG | + | chr8.4:58685151-58685170 | None:intergenic | 45.0% | |
| TGGGGTATACTTGATCCTCT+TGG | + | chr8.4:58683744-58683763 | None:intergenic | 45.0% | |
| TGGTAGGGTTACATTCATGC+CGG | + | chr8.4:58685009-58685028 | None:intergenic | 45.0% | |
| TGTATGAGGATGTTGTCTGG+TGG | + | chr8.4:58685029-58685048 | None:intergenic | 45.0% | |
| TTCTTCCATAGCAGCTAGTG+TGG | - | chr8.4:58683484-58683503 | MS.gene61745:CDS | 45.0% | |
| TTTCTACAGGATGCTGCGTT+TGG | - | chr8.4:58681804-58681823 | MS.gene61745:CDS | 45.0% | |
| TTTCTTACGGCGGTGTATAC+AGG | + | chr8.4:58684879-58684898 | None:intergenic | 45.0% | |
| ! | ACACAGCCAAAAGTGTACCT+TGG | + | chr8.4:58683545-58683564 | None:intergenic | 45.0% |
| ! | AGGGTTGTCACAGGTAGTTT+TGG | + | chr8.4:58684924-58684943 | None:intergenic | 45.0% |
| ! | GAGGGATATCGACGATTTTC+CGG | + | chr8.4:58683829-58683848 | None:intergenic | 45.0% |
| ! | TCTAGGGTTTCTGAGAAGTG+GGG | + | chr8.4:58683762-58683781 | None:intergenic | 45.0% |
| ! | TTAGTGGGTCGTTGAGACTT+GGG | - | chr8.4:58683705-58683724 | MS.gene61745:intron | 45.0% |
| ! | TTTAGTGGGTCGTTGAGACT+TGG | - | chr8.4:58683704-58683723 | MS.gene61745:intron | 45.0% |
| !! | CTTCTAGGGTTTCTGAGAAG+TGG | + | chr8.4:58683764-58683783 | None:intergenic | 45.0% |
| !! | GATTGTGCCCCATGTTTTGA+AGG | + | chr8.4:58684290-58684309 | None:intergenic | 45.0% |
| !!! | GTAGTTTTGGACCAACTCGT+CGG | + | chr8.4:58684911-58684930 | None:intergenic | 45.0% |
| !! | TATATAAATATAAAATAGAA+AGG | + | chr8.4:58684265-58684284 | None:intergenic | 5.0% |
| !!! | AATTAAACATTTATAAATTT+TGG | - | chr8.4:58683069-58683088 | MS.gene61745:intron | 5.0% |
| AAGCCCAATAGACCCTGTTG+TGG | + | chr8.4:58683593-58683612 | None:intergenic | 50.0% | |
| ACAACAGGGTCTATTGGGCT+TGG | - | chr8.4:58683592-58683611 | MS.gene61745:intron | 50.0% | |
| AGCACCACAACAGGGTCTAT+TGG | - | chr8.4:58683586-58683605 | MS.gene61745:intron | 50.0% | |
| AGCACCCGATAACGTGAACT+CGG | - | chr8.4:58685088-58685107 | MS.gene61745:intron | 50.0% | |
| AGGAAGTTCAGCACCACAAC+AGG | - | chr8.4:58683577-58683596 | MS.gene61745:intron | 50.0% | |
| ATCCTCATACATAGCACCGC+CGG | - | chr8.4:58685038-58685057 | MS.gene61745:intron | 50.0% | |
| ATCCTCTTGGGCTGATACAC+CGG | + | chr8.4:58683731-58683750 | None:intergenic | 50.0% | |
| CAACAGGGTCTATTGGGCTT+GGG | - | chr8.4:58683593-58683612 | MS.gene61745:intron | 50.0% | |
| CATATGGCCAAGTCACGTGT+AGG | + | chr8.4:58684422-58684441 | None:intergenic | 50.0% | |
| GAGGATGTTGTCTGGTGGTA+GGG | + | chr8.4:58685024-58685043 | None:intergenic | 50.0% | |
| GCACATCAAATAGCACACGG+TGG | + | chr8.4:58685148-58685167 | None:intergenic | 50.0% | |
| GCACCACAACAGGGTCTATT+GGG | - | chr8.4:58683587-58683606 | MS.gene61745:intron | 50.0% | |
| GCGAAACTCGTTTCTTACGG+CGG | + | chr8.4:58684889-58684908 | None:intergenic | 50.0% | |
| GCGCAAAGAACCCTTTCTAC+AGG | - | chr8.4:58681791-58681810 | MS.gene61745:CDS | 50.0% | |
| GGAAGTTCAGCACCACAACA+GGG | - | chr8.4:58683578-58683597 | MS.gene61745:intron | 50.0% | |
| GTACCTTGGAATTGGGTCAG+TGG | + | chr8.4:58683531-58683550 | None:intergenic | 50.0% | |
| TACCTGTGACAACCCTAGGA+GGG | - | chr8.4:58684928-58684947 | MS.gene61745:intron | 50.0% | |
| TAGCACCACATGTTTGGCCA+TGG | - | chr8.4:58685061-58685080 | MS.gene61745:intron | 50.0% | |
| TAGCCACTGACCCAATTCCA+AGG | - | chr8.4:58683525-58683544 | MS.gene61745:CDS | 50.0% | |
| TGAGGATGTTGTCTGGTGGT+AGG | + | chr8.4:58685025-58685044 | None:intergenic | 50.0% | |
| TGGAATTGGGTCAGTGGCTA+GGG | + | chr8.4:58683525-58683544 | None:intergenic | 50.0% | |
| TGGCTAGGGTAAGTGTGTCT+TGG | + | chr8.4:58683511-58683530 | None:intergenic | 50.0% | |
| TTGGAATTGGGTCAGTGGCT+AGG | + | chr8.4:58683526-58683545 | None:intergenic | 50.0% | |
| TTGGACCACACTAGCTGCTA+TGG | + | chr8.4:58683492-58683511 | None:intergenic | 50.0% | |
| TTTGGGCCAAGAGCGACAAT+GGG | + | chr8.4:58683625-58683644 | None:intergenic | 50.0% | |
| ! | AGGATGCTGCGTTTGGAACA+GGG | - | chr8.4:58681811-58681830 | MS.gene61745:CDS | 50.0% |
| AACCCTCCTAGGGTTGTCAC+AGG | + | chr8.4:58684933-58684952 | None:intergenic | 55.0% | |
| AACGAGTTTCGCCGACGAGT+TGG | - | chr8.4:58684897-58684916 | MS.gene61745:intron | 55.0% | |
| ACCACATGTTTGGCCATGGC+AGG | - | chr8.4:58685065-58685084 | MS.gene61745:intron | 55.0% | |
| AGCATGTGTCGAACCCTCCT+AGG | + | chr8.4:58684944-58684963 | None:intergenic | 55.0% | |
| CTACCTGTGACAACCCTAGG+AGG | - | chr8.4:58684927-58684946 | MS.gene61745:intron | 55.0% | |
| CTGGCGTTCAACCCAACTAC+CGG | - | chr8.4:58683857-58683876 | MS.gene61745:intron | 55.0% | |
| CTTTGGGCCAAGAGCGACAA+TGG | + | chr8.4:58683626-58683645 | None:intergenic | 55.0% | |
| GCATGTGTCGAACCCTCCTA+GGG | + | chr8.4:58684943-58684962 | None:intergenic | 55.0% | |
| TCCTGCCATGGCCAAACATG+TGG | + | chr8.4:58685069-58685088 | None:intergenic | 55.0% | |
| TTCAACCCAACTACCGGTGC+TGG | - | chr8.4:58683863-58683882 | MS.gene61745:intron | 55.0% | |
| ! | CAGGATGCTGCGTTTGGAAC+AGG | - | chr8.4:58681810-58681829 | MS.gene61745:CDS | 55.0% |
| !! | ATGGTTCCAGCACCGGTAGT+TGG | + | chr8.4:58683872-58683891 | None:intergenic | 55.0% |
| !! | CAAACATGTGGTGCTACCGG+CGG | + | chr8.4:58685057-58685076 | None:intergenic | 55.0% |
| !! | GGCCAAACATGTGGTGCTAC+CGG | + | chr8.4:58685060-58685079 | None:intergenic | 55.0% |
| !! | TACCGGCGGTGCTATGTATG+AGG | + | chr8.4:58685043-58685062 | None:intergenic | 55.0% |
| !! | TGGTTCCAGCACCGGTAGTT+GGG | + | chr8.4:58683871-58683890 | None:intergenic | 55.0% |
| CAGGTACCCAACCCCACTTG+CGG | - | chr8.4:58683425-58683444 | MS.gene61745:CDS | 60.0% | |
| CCAAGAGCGACAATGGGCCT+CGG | + | chr8.4:58683619-58683638 | None:intergenic | 60.0% | |
| CGCCGGTAGCACCACATGTT+TGG | - | chr8.4:58685055-58685074 | MS.gene61745:intron | 60.0% | |
| CTTCCACCGCAAGTGGGGTT+GGG | + | chr8.4:58683434-58683453 | None:intergenic | 60.0% | |
| GTTATCGGGTGCTCCTGCCA+TGG | + | chr8.4:58685081-58685100 | None:intergenic | 60.0% | |
| TGGGTCGTTGAGACTTGGGC+CGG | - | chr8.4:58683709-58683728 | MS.gene61745:intron | 60.0% | |
| ACACGCGCTTCCACCGCAAG+TGG | + | chr8.4:58683441-58683460 | None:intergenic | 65.0% | |
| ACGCGCTTCCACCGCAAGTG+GGG | + | chr8.4:58683439-58683458 | None:intergenic | 65.0% | |
| CACGCGCTTCCACCGCAAGT+GGG | + | chr8.4:58683440-58683459 | None:intergenic | 65.0% | |
| CCGAGGCCCATTGTCGCTCT+TGG | - | chr8.4:58683616-58683635 | MS.gene61745:intron | 65.0% | |
| GCTTCCACCGCAAGTGGGGT+TGG | + | chr8.4:58683435-58683454 | None:intergenic | 65.0% | |
| GGCCGGTGTATCAGCCCAAG+AGG | - | chr8.4:58683726-58683745 | MS.gene61745:intron | 65.0% | |
| GGTCTATTGGGCTTGGGCCG+AGG | - | chr8.4:58683599-58683618 | MS.gene61745:intron | 65.0% | |
| GTACCCAACCCCACTTGCGG+TGG | - | chr8.4:58683428-58683447 | MS.gene61745:CDS | 65.0% | |
| CGATATCCCTCCGGCTGCGC+TGG | - | chr8.4:58683838-58683857 | MS.gene61745:intron | 70.0% | |
| GGGTTGAACGCCAGCGCAGC+CGG | + | chr8.4:58683851-58683870 | None:intergenic | 70.0% | |
| TGAACGCCAGCGCAGCCGGA+GGG | + | chr8.4:58683847-58683866 | None:intergenic | 70.0% | |
| TTGAACGCCAGCGCAGCCGG+AGG | + | chr8.4:58683848-58683867 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 58681773 | 58685208 | 58681773 | ID=MS.gene61745 |
| chr8.4 | mRNA | 58681773 | 58685208 | 58681773 | ID=MS.gene61745.t1;Parent=MS.gene61745 |
| chr8.4 | exon | 58685137 | 58685208 | 58685137 | ID=MS.gene61745.t1.exon1;Parent=MS.gene61745.t1 |
| chr8.4 | CDS | 58685137 | 58685208 | 58685137 | ID=cds.MS.gene61745.t1;Parent=MS.gene61745.t1 |
| chr8.4 | exon | 58683079 | 58683553 | 58683079 | ID=MS.gene61745.t1.exon2;Parent=MS.gene61745.t1 |
| chr8.4 | CDS | 58683079 | 58683553 | 58683079 | ID=cds.MS.gene61745.t1;Parent=MS.gene61745.t1 |
| chr8.4 | exon | 58681773 | 58682131 | 58681773 | ID=MS.gene61745.t1.exon3;Parent=MS.gene61745.t1 |
| chr8.4 | CDS | 58681773 | 58682131 | 58681773 | ID=cds.MS.gene61745.t1;Parent=MS.gene61745.t1 |
| Gene Sequence |
| Protein sequence |
