Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38435.t1 | XP_013460449.1 | 95 | 380 | 19 | 0 | 6 | 385 | 36 | 415 | 5.60E-205 | 723.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38435.t1 | Q6WG30 | 38.8 | 381 | 231 | 2 | 6 | 385 | 55 | 434 | 1.6e-75 | 284.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38435.t1 | A0A072UY40 | 95.0 | 380 | 19 | 0 | 6 | 385 | 36 | 415 | 4.0e-205 | 723.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04927 | MS.gene38435 | 0.819782 | 9.69E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene38435 | -0.804952 | 1.69E-49 | -1.69E-46 |
| MS.gene04932 | MS.gene38435 | 0.847064 | 1.46E-59 | -1.69E-46 |
| MS.gene049549 | MS.gene38435 | 0.889644 | 2.01E-73 | -1.69E-46 |
| MS.gene049609 | MS.gene38435 | -0.806256 | 8.98E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene38435 | 0.808868 | 2.51E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene38435 | 0.819884 | 9.19E-53 | -1.69E-46 |
| MS.gene050095 | MS.gene38435 | 0.823143 | 1.62E-53 | -1.69E-46 |
| MS.gene050096 | MS.gene38435 | 0.839322 | 1.70E-57 | -1.69E-46 |
| MS.gene050381 | MS.gene38435 | 0.802136 | 6.47E-49 | -1.69E-46 |
| MS.gene050647 | MS.gene38435 | 0.834682 | 2.60E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene38435 | -0.802414 | 5.68E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene38435 | 0.804903 | 1.73E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene38435 | -0.810866 | 9.32E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene38435 | 0.813995 | 1.93E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene38435 | 0.860587 | 1.86E-63 | -1.69E-46 |
| MS.gene051138 | MS.gene38435 | 0.815649 | 8.30E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene38435 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene051632 | MS.gene38435 | 0.805406 | 1.36E-49 | -1.69E-46 |
| MS.gene051844 | MS.gene38435 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene38435 | -0.811184 | 7.95E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene38435 | -0.82159 | 3.72E-53 | -1.69E-46 |
| MS.gene052211 | MS.gene38435 | 0.879197 | 1.52E-69 | -1.69E-46 |
| MS.gene052212 | MS.gene38435 | 0.821114 | 4.80E-53 | -1.69E-46 |
| MS.gene05240 | MS.gene38435 | 0.889421 | 2.46E-73 | -1.69E-46 |
| MS.gene05244 | MS.gene38435 | 0.863613 | 2.20E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene38435 | -0.802763 | 4.81E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene38435 | 0.846169 | 2.57E-59 | -1.69E-46 |
| MS.gene052702 | MS.gene38435 | 0.823227 | 1.55E-53 | -1.69E-46 |
| MS.gene052705 | MS.gene38435 | 0.827185 | 1.80E-54 | -1.69E-46 |
| MS.gene052706 | MS.gene38435 | 0.826618 | 2.46E-54 | -1.69E-46 |
| MS.gene052805 | MS.gene38435 | 0.809837 | 1.55E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene38435 | -0.806018 | 1.01E-49 | -1.69E-46 |
| MS.gene053030 | MS.gene38435 | 0.802254 | 6.12E-49 | -1.69E-46 |
| MS.gene053031 | MS.gene38435 | 0.825379 | 4.84E-54 | -1.69E-46 |
| MS.gene053403 | MS.gene38435 | 0.82031 | 7.34E-53 | -1.69E-46 |
| MS.gene053406 | MS.gene38435 | 0.859094 | 5.25E-63 | -1.69E-46 |
| MS.gene053420 | MS.gene38435 | 0.838924 | 2.15E-57 | -1.69E-46 |
| MS.gene053488 | MS.gene38435 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene38435 | -0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene38435 | 0.83899 | 2.07E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene38435 | -0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene054120 | MS.gene38435 | 0.815851 | 7.48E-52 | -1.69E-46 |
| MS.gene054146 | MS.gene38435 | 0.863907 | 1.78E-64 | -1.69E-46 |
| MS.gene054147 | MS.gene38435 | 0.808468 | 3.05E-50 | -1.69E-46 |
| MS.gene054181 | MS.gene38435 | 0.850424 | 1.71E-60 | -1.69E-46 |
| MS.gene054277 | MS.gene38435 | 0.850631 | 1.50E-60 | -1.69E-46 |
| MS.gene054290 | MS.gene38435 | 0.810019 | 1.42E-50 | -1.69E-46 |
| MS.gene054421 | MS.gene38435 | 0.82278 | 1.97E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene38435 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene38435 | -0.805956 | 1.04E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene38435 | 0.878443 | 2.80E-69 | -1.69E-46 |
| MS.gene05483 | MS.gene38435 | 0.833431 | 5.36E-56 | -1.69E-46 |
| MS.gene054884 | MS.gene38435 | 0.810988 | 8.77E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene38435 | 0.815072 | 1.11E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene38435 | 0.833704 | 4.58E-56 | -1.69E-46 |
| MS.gene055240 | MS.gene38435 | 0.850452 | 1.68E-60 | -1.69E-46 |
| MS.gene055289 | MS.gene38435 | -0.801785 | 7.64E-49 | -1.69E-46 |
| MS.gene055340 | MS.gene38435 | 0.807461 | 5.00E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene38435 | -0.807391 | 5.17E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene38435 | -0.80781 | 4.21E-50 | -1.69E-46 |
| MS.gene055959 | MS.gene38435 | 0.806608 | 7.57E-50 | -1.69E-46 |
| MS.gene056218 | MS.gene38435 | 0.842715 | 2.18E-58 | -1.69E-46 |
| MS.gene056224 | MS.gene38435 | 0.836998 | 6.74E-57 | -1.69E-46 |
| MS.gene056298 | MS.gene38435 | 0.80189 | 7.27E-49 | -1.69E-46 |
| MS.gene056330 | MS.gene38435 | 0.825652 | 4.17E-54 | -1.69E-46 |
| MS.gene056359 | MS.gene38435 | 0.835827 | 1.34E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene38435 | -0.803093 | 4.11E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene38435 | 0.895461 | 9.38E-76 | -1.69E-46 |
| MS.gene056591 | MS.gene38435 | 0.89419 | 3.11E-75 | -1.69E-46 |
| MS.gene056680 | MS.gene38435 | 0.802151 | 6.43E-49 | -1.69E-46 |
| MS.gene056697 | MS.gene38435 | 0.82081 | 5.63E-53 | -1.69E-46 |
| MS.gene056714 | MS.gene38435 | 0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene056715 | MS.gene38435 | 0.812732 | 3.66E-51 | -1.69E-46 |
| MS.gene056748 | MS.gene38435 | 0.85357 | 2.19E-61 | -1.69E-46 |
| MS.gene056856 | MS.gene38435 | 0.838258 | 3.20E-57 | -1.69E-46 |
| MS.gene056920 | MS.gene38435 | 0.860179 | 2.47E-63 | -1.69E-46 |
| MS.gene056922 | MS.gene38435 | 0.826002 | 3.45E-54 | -1.69E-46 |
| MS.gene056923 | MS.gene38435 | 0.813459 | 2.53E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene38435 | -0.802874 | 4.56E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene38435 | 0.833943 | 3.99E-56 | -1.69E-46 |
| MS.gene057544 | MS.gene38435 | 0.846903 | 1.62E-59 | -1.69E-46 |
| MS.gene057547 | MS.gene38435 | 0.822423 | 2.39E-53 | -1.69E-46 |
| MS.gene057550 | MS.gene38435 | 0.824217 | 9.10E-54 | -1.69E-46 |
| MS.gene057768 | MS.gene38435 | 0.81295 | 3.27E-51 | -1.69E-46 |
| MS.gene058067 | MS.gene38435 | 0.810936 | 9.00E-51 | -1.69E-46 |
| MS.gene058093 | MS.gene38435 | 0.805035 | 1.62E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene38435 | 0.816842 | 4.49E-52 | -1.69E-46 |
| MS.gene058109 | MS.gene38435 | 0.81406 | 1.87E-51 | -1.69E-46 |
| MS.gene058117 | MS.gene38435 | 0.829767 | 4.28E-55 | -1.69E-46 |
| MS.gene058177 | MS.gene38435 | 0.802836 | 4.64E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene38435 | -0.803152 | 4.00E-49 | -1.69E-46 |
| MS.gene058381 | MS.gene38435 | 0.825646 | 4.18E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene38435 | -0.810557 | 1.09E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene38435 | 0.868125 | 8.24E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene38435 | -0.811421 | 7.06E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene38435 | -0.804895 | 1.73E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene38435 | 0.804079 | 2.57E-49 | -1.69E-46 |
| MS.gene059038 | MS.gene38435 | 0.801785 | 7.64E-49 | -1.69E-46 |
| MS.gene059328 | MS.gene38435 | 0.835062 | 2.09E-56 | -1.69E-46 |
| MS.gene059402 | MS.gene38435 | 0.837639 | 4.62E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene38435 | -0.814093 | 1.84E-51 | -1.69E-46 |
| MS.gene059953 | MS.gene38435 | 0.88566 | 6.71E-72 | -1.69E-46 |
| MS.gene059955 | MS.gene38435 | 0.875267 | 3.53E-68 | -1.69E-46 |
| MS.gene060087 | MS.gene38435 | 0.86494 | 8.47E-65 | -1.69E-46 |
| MS.gene060405 | MS.gene38435 | 0.804318 | 2.29E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene38435 | 0.808298 | 3.32E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene38435 | -0.800497 | 1.40E-48 | -1.69E-46 |
| MS.gene061041 | MS.gene38435 | -0.803853 | 2.86E-49 | -1.69E-46 |
| MS.gene061092 | MS.gene38435 | 0.806848 | 6.74E-50 | -1.69E-46 |
| MS.gene061094 | MS.gene38435 | 0.810563 | 1.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38435.t1 | MTR_3g467140 | 95.000 | 380 | 19 | 0 | 6 | 385 | 36 | 415 | 0.0 | 749 |
| MS.gene38435.t1 | MTR_3g467130 | 81.842 | 380 | 69 | 0 | 6 | 385 | 36 | 415 | 0.0 | 664 |
| MS.gene38435.t1 | MTR_3g467140 | 94.326 | 282 | 16 | 0 | 104 | 385 | 1 | 282 | 0.0 | 556 |
| MS.gene38435.t1 | MTR_5g092150 | 40.945 | 381 | 222 | 3 | 6 | 385 | 32 | 410 | 1.58e-98 | 301 |
| MS.gene38435.t1 | MTR_8g100135 | 36.290 | 372 | 234 | 3 | 6 | 375 | 37 | 407 | 3.24e-81 | 256 |
| MS.gene38435.t1 | MTR_5g091760 | 34.946 | 372 | 236 | 4 | 6 | 375 | 41 | 408 | 7.24e-79 | 251 |
| MS.gene38435.t1 | MTR_8g100135 | 35.549 | 346 | 220 | 3 | 6 | 349 | 37 | 381 | 1.75e-69 | 224 |
| MS.gene38435.t1 | MTR_5g020020 | 30.933 | 375 | 250 | 4 | 6 | 376 | 39 | 408 | 1.73e-57 | 195 |
| MS.gene38435.t1 | MTR_5g025610 | 33.333 | 378 | 233 | 9 | 6 | 380 | 38 | 399 | 8.50e-57 | 192 |
| MS.gene38435.t1 | MTR_5g025610 | 33.333 | 378 | 233 | 9 | 6 | 380 | 38 | 399 | 1.97e-56 | 192 |
| MS.gene38435.t1 | MTR_1g037580 | 30.585 | 376 | 250 | 5 | 6 | 380 | 47 | 412 | 2.57e-55 | 189 |
| MS.gene38435.t1 | MTR_5g025610 | 32.976 | 373 | 231 | 9 | 6 | 375 | 38 | 394 | 9.18e-55 | 186 |
| MS.gene38435.t1 | MTR_8g072260 | 34.392 | 378 | 229 | 11 | 6 | 380 | 40 | 401 | 9.43e-54 | 184 |
| MS.gene38435.t1 | MTR_4g086130 | 30.319 | 376 | 252 | 4 | 6 | 380 | 38 | 404 | 1.44e-53 | 184 |
| MS.gene38435.t1 | MTR_8g072260 | 34.392 | 378 | 229 | 11 | 6 | 380 | 40 | 401 | 1.68e-53 | 184 |
| MS.gene38435.t1 | MTR_8g072260 | 34.316 | 373 | 226 | 11 | 6 | 375 | 40 | 396 | 9.87e-53 | 182 |
| MS.gene38435.t1 | MTR_8g077810 | 29.474 | 380 | 255 | 5 | 6 | 379 | 36 | 408 | 1.12e-51 | 180 |
| MS.gene38435.t1 | MTR_8g016180 | 28.226 | 372 | 260 | 3 | 5 | 375 | 39 | 404 | 2.57e-51 | 177 |
| MS.gene38435.t1 | MTR_8g016180 | 28.150 | 373 | 261 | 3 | 5 | 376 | 39 | 405 | 5.58e-51 | 177 |
| MS.gene38435.t1 | MTR_5g082520 | 27.907 | 387 | 254 | 6 | 6 | 383 | 31 | 401 | 9.52e-51 | 177 |
| MS.gene38435.t1 | MTR_4g086040 | 30.423 | 378 | 249 | 5 | 6 | 380 | 41 | 407 | 3.69e-50 | 175 |
| MS.gene38435.t1 | MTR_5g010750 | 27.224 | 371 | 264 | 3 | 6 | 375 | 34 | 399 | 7.05e-50 | 174 |
| MS.gene38435.t1 | MTR_6g034940 | 30.749 | 387 | 256 | 6 | 1 | 380 | 36 | 417 | 7.86e-50 | 174 |
| MS.gene38435.t1 | MTR_1g019410 | 29.787 | 376 | 255 | 5 | 6 | 380 | 38 | 405 | 9.76e-50 | 174 |
| MS.gene38435.t1 | MTR_5g010750 | 27.224 | 371 | 264 | 3 | 6 | 375 | 34 | 399 | 2.84e-49 | 173 |
| MS.gene38435.t1 | MTR_8g089190 | 28.792 | 389 | 258 | 9 | 6 | 385 | 4 | 382 | 1.94e-48 | 170 |
| MS.gene38435.t1 | MTR_3g112120 | 30.491 | 387 | 246 | 8 | 6 | 380 | 44 | 419 | 8.47e-48 | 169 |
| MS.gene38435.t1 | MTR_5g021220 | 31.026 | 390 | 240 | 9 | 6 | 375 | 39 | 419 | 1.52e-47 | 169 |
| MS.gene38435.t1 | MTR_8g089800 | 29.843 | 382 | 250 | 10 | 6 | 376 | 46 | 420 | 3.61e-47 | 167 |
| MS.gene38435.t1 | MTR_7g033040 | 29.091 | 385 | 260 | 7 | 6 | 384 | 36 | 413 | 4.96e-47 | 167 |
| MS.gene38435.t1 | MTR_3g070380 | 28.421 | 380 | 247 | 7 | 6 | 376 | 32 | 395 | 2.40e-46 | 166 |
| MS.gene38435.t1 | MTR_2g031920 | 27.851 | 377 | 264 | 6 | 6 | 376 | 44 | 418 | 7.56e-45 | 161 |
| MS.gene38435.t1 | MTR_5g014250 | 27.926 | 376 | 264 | 6 | 6 | 376 | 48 | 421 | 1.90e-44 | 160 |
| MS.gene38435.t1 | MTR_5g014240 | 27.733 | 375 | 265 | 5 | 6 | 376 | 48 | 420 | 3.95e-44 | 159 |
| MS.gene38435.t1 | MTR_8g076510 | 28.232 | 379 | 251 | 8 | 6 | 375 | 42 | 408 | 4.60e-42 | 154 |
| MS.gene38435.t1 | MTR_4g005230 | 29.894 | 378 | 250 | 10 | 6 | 376 | 46 | 415 | 1.20e-41 | 152 |
| MS.gene38435.t1 | MTR_7g016040 | 27.224 | 371 | 254 | 9 | 6 | 374 | 36 | 392 | 3.90e-41 | 151 |
| MS.gene38435.t1 | MTR_2g031930 | 26.984 | 378 | 270 | 5 | 6 | 379 | 44 | 419 | 5.70e-41 | 150 |
| MS.gene38435.t1 | MTR_3g007320 | 27.419 | 372 | 253 | 7 | 6 | 374 | 36 | 393 | 9.56e-41 | 150 |
| MS.gene38435.t1 | MTR_2g031930 | 26.984 | 378 | 270 | 5 | 6 | 379 | 48 | 423 | 1.02e-40 | 150 |
| MS.gene38435.t1 | MTR_8g076940 | 27.895 | 380 | 261 | 7 | 6 | 380 | 49 | 420 | 7.74e-40 | 148 |
| MS.gene38435.t1 | MTR_8g076940 | 27.487 | 382 | 264 | 7 | 6 | 382 | 49 | 422 | 2.33e-39 | 145 |
| MS.gene38435.t1 | MTR_6g015910 | 27.660 | 376 | 247 | 9 | 6 | 374 | 36 | 393 | 3.20e-39 | 145 |
| MS.gene38435.t1 | MTR_8g012970 | 30.469 | 384 | 246 | 9 | 6 | 378 | 48 | 421 | 3.83e-39 | 146 |
| MS.gene38435.t1 | MTR_1g032950 | 27.532 | 385 | 240 | 8 | 6 | 376 | 46 | 405 | 4.06e-39 | 145 |
| MS.gene38435.t1 | MTR_8g089190 | 27.762 | 353 | 237 | 8 | 6 | 349 | 4 | 347 | 1.51e-38 | 141 |
| MS.gene38435.t1 | MTR_5g020020 | 30.375 | 293 | 181 | 6 | 102 | 376 | 47 | 334 | 6.02e-34 | 130 |
| MS.gene38435.t1 | MTR_7g016040 | 27.003 | 337 | 230 | 9 | 6 | 340 | 36 | 358 | 1.02e-32 | 126 |
| MS.gene38435.t1 | MTR_0045s0060 | 25.450 | 389 | 258 | 13 | 6 | 380 | 43 | 413 | 2.46e-31 | 124 |
| MS.gene38435.t1 | MTR_0045s0080 | 25.326 | 383 | 252 | 11 | 5 | 375 | 42 | 402 | 4.31e-31 | 122 |
| MS.gene38435.t1 | MTR_6g069000 | 24.868 | 378 | 264 | 7 | 6 | 377 | 53 | 416 | 2.45e-29 | 118 |
| MS.gene38435.t1 | MTR_6g069000 | 24.868 | 378 | 264 | 8 | 6 | 377 | 43 | 406 | 2.81e-29 | 118 |
| MS.gene38435.t1 | MTR_0045s0070 | 24.742 | 388 | 258 | 12 | 6 | 378 | 43 | 411 | 3.11e-28 | 115 |
| MS.gene38435.t1 | MTR_0045s0070 | 24.742 | 388 | 258 | 12 | 6 | 378 | 43 | 411 | 3.97e-28 | 115 |
| MS.gene38435.t1 | MTR_0045s0060 | 24.277 | 346 | 240 | 10 | 42 | 380 | 1 | 331 | 1.62e-27 | 112 |
| MS.gene38435.t1 | MTR_1g032980 | 26.282 | 312 | 219 | 5 | 6 | 310 | 19 | 326 | 3.69e-27 | 111 |
| MS.gene38435.t1 | MTR_8g076940 | 25.641 | 351 | 248 | 7 | 6 | 351 | 49 | 391 | 1.33e-26 | 110 |
| MS.gene38435.t1 | MTR_8g076940 | 26.686 | 341 | 235 | 8 | 6 | 340 | 49 | 380 | 2.74e-26 | 108 |
| MS.gene38435.t1 | MTR_3g051230 | 38.760 | 129 | 59 | 2 | 7 | 135 | 30 | 138 | 2.69e-20 | 87.4 |
| MS.gene38435.t1 | MTR_4g029690 | 26.978 | 278 | 187 | 8 | 6 | 275 | 46 | 315 | 3.63e-18 | 85.1 |
| MS.gene38435.t1 | MTR_2g073420 | 30.035 | 283 | 157 | 9 | 117 | 374 | 161 | 427 | 2.26e-15 | 77.8 |
| MS.gene38435.t1 | MTR_1g492820 | 23.573 | 403 | 257 | 13 | 6 | 374 | 48 | 433 | 4.80e-15 | 77.0 |
| MS.gene38435.t1 | MTR_1g037560 | 25.455 | 330 | 207 | 12 | 80 | 374 | 141 | 466 | 3.38e-14 | 74.3 |
| MS.gene38435.t1 | MTR_6g022450 | 23.499 | 383 | 228 | 15 | 38 | 376 | 70 | 431 | 8.88e-14 | 73.2 |
| MS.gene38435.t1 | MTR_2g073440 | 24.857 | 350 | 235 | 9 | 39 | 374 | 64 | 399 | 2.80e-13 | 71.2 |
| MS.gene38435.t1 | MTR_1g037550 | 23.630 | 292 | 180 | 11 | 122 | 374 | 183 | 470 | 3.22e-13 | 71.2 |
| MS.gene38435.t1 | MTR_2g073480 | 27.652 | 264 | 171 | 7 | 117 | 374 | 83 | 332 | 3.76e-13 | 70.9 |
| MS.gene38435.t1 | MTR_5g007450 | 25.065 | 387 | 257 | 13 | 6 | 374 | 45 | 416 | 4.85e-13 | 70.9 |
| MS.gene38435.t1 | MTR_5g007550 | 24.548 | 387 | 259 | 13 | 6 | 374 | 45 | 416 | 1.48e-12 | 69.3 |
| MS.gene38435.t1 | MTR_8g469360 | 26.122 | 245 | 161 | 6 | 144 | 376 | 114 | 350 | 1.52e-12 | 68.9 |
| MS.gene38435.t1 | MTR_5g007460 | 22.556 | 399 | 264 | 11 | 6 | 374 | 12 | 395 | 2.35e-12 | 68.6 |
| MS.gene38435.t1 | MTR_1g031700 | 24.041 | 391 | 264 | 11 | 6 | 374 | 37 | 416 | 5.71e-12 | 67.4 |
| MS.gene38435.t1 | MTR_2g019640 | 22.166 | 397 | 262 | 13 | 7 | 374 | 45 | 423 | 9.01e-12 | 67.0 |
| MS.gene38435.t1 | MTR_5g026520 | 22.362 | 398 | 267 | 16 | 11 | 374 | 37 | 426 | 5.62e-11 | 64.3 |
| MS.gene38435.t1 | MTR_7g079440 | 23.279 | 305 | 193 | 11 | 96 | 374 | 280 | 569 | 6.12e-11 | 64.3 |
| MS.gene38435.t1 | MTR_7g079440 | 22.670 | 397 | 259 | 14 | 10 | 374 | 189 | 569 | 6.84e-11 | 64.3 |
| MS.gene38435.t1 | MTR_4g078110 | 23.846 | 390 | 252 | 13 | 6 | 374 | 31 | 396 | 7.05e-11 | 63.9 |
| MS.gene38435.t1 | MTR_0147s0030 | 22.764 | 369 | 248 | 14 | 32 | 376 | 102 | 457 | 9.13e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38435.t1 | AT5G36110 | 36.243 | 378 | 226 | 6 | 6 | 376 | 37 | 406 | 3.37e-70 | 228 |
| MS.gene38435.t1 | AT2G42850 | 31.467 | 375 | 252 | 4 | 6 | 379 | 48 | 418 | 2.01e-66 | 218 |
| MS.gene38435.t1 | AT4G19230 | 34.043 | 376 | 231 | 7 | 6 | 380 | 39 | 398 | 1.08e-60 | 203 |
| MS.gene38435.t1 | AT4G19230 | 34.043 | 376 | 231 | 7 | 6 | 380 | 39 | 398 | 1.94e-60 | 202 |
| MS.gene38435.t1 | AT5G36110 | 35.328 | 351 | 212 | 6 | 6 | 349 | 37 | 379 | 3.00e-58 | 194 |
| MS.gene38435.t1 | AT5G45340 | 32.891 | 377 | 234 | 8 | 6 | 380 | 39 | 398 | 9.79e-58 | 194 |
| MS.gene38435.t1 | AT5G45340 | 32.891 | 377 | 234 | 8 | 6 | 380 | 39 | 398 | 1.50e-57 | 194 |
| MS.gene38435.t1 | AT2G42850 | 31.214 | 346 | 231 | 5 | 6 | 349 | 48 | 388 | 2.75e-54 | 184 |
| MS.gene38435.t1 | AT1G12740 | 28.495 | 372 | 258 | 4 | 6 | 375 | 34 | 399 | 1.03e-51 | 179 |
| MS.gene38435.t1 | AT4G36380 | 28.000 | 375 | 260 | 4 | 6 | 375 | 72 | 441 | 4.67e-50 | 176 |
| MS.gene38435.t1 | AT1G12740 | 28.042 | 378 | 258 | 5 | 6 | 375 | 34 | 405 | 3.40e-49 | 173 |
| MS.gene38435.t1 | AT1G12740 | 27.778 | 378 | 259 | 5 | 6 | 375 | 34 | 405 | 4.55e-49 | 172 |
| MS.gene38435.t1 | AT3G19270 | 29.815 | 379 | 249 | 7 | 6 | 380 | 37 | 402 | 1.66e-48 | 170 |
| MS.gene38435.t1 | AT2G29090 | 29.211 | 380 | 251 | 5 | 6 | 380 | 52 | 418 | 3.63e-48 | 170 |
| MS.gene38435.t1 | AT2G29090 | 29.211 | 380 | 251 | 5 | 6 | 380 | 52 | 418 | 3.63e-48 | 170 |
| MS.gene38435.t1 | AT3G19270 | 29.815 | 379 | 249 | 7 | 6 | 380 | 37 | 402 | 4.23e-48 | 170 |
| MS.gene38435.t1 | AT5G14400 | 28.796 | 382 | 231 | 9 | 8 | 379 | 1 | 351 | 4.75e-48 | 167 |
| MS.gene38435.t1 | AT3G13730 | 29.091 | 385 | 243 | 8 | 6 | 375 | 54 | 423 | 8.81e-48 | 169 |
| MS.gene38435.t1 | AT5G14400 | 28.796 | 382 | 231 | 9 | 8 | 379 | 1 | 351 | 1.29e-47 | 167 |
| MS.gene38435.t1 | AT3G13730 | 29.091 | 385 | 243 | 8 | 6 | 375 | 54 | 423 | 1.39e-47 | 169 |
| MS.gene38435.t1 | AT3G50660 | 27.407 | 405 | 264 | 4 | 6 | 385 | 42 | 441 | 2.87e-47 | 167 |
| MS.gene38435.t1 | AT3G50660 | 27.595 | 395 | 256 | 4 | 6 | 375 | 42 | 431 | 2.58e-46 | 166 |
| MS.gene38435.t1 | AT5G05690 | 27.297 | 381 | 250 | 6 | 6 | 376 | 34 | 397 | 1.79e-45 | 161 |
| MS.gene38435.t1 | AT2G32440 | 28.117 | 377 | 264 | 6 | 6 | 378 | 47 | 420 | 2.09e-45 | 163 |
| MS.gene38435.t1 | AT2G32440 | 28.117 | 377 | 264 | 6 | 6 | 378 | 47 | 420 | 2.09e-45 | 163 |
| MS.gene38435.t1 | AT5G05690 | 27.089 | 395 | 255 | 7 | 6 | 384 | 34 | 411 | 2.52e-45 | 162 |
| MS.gene38435.t1 | AT5G38970 | 28.877 | 374 | 245 | 8 | 6 | 374 | 37 | 394 | 2.71e-44 | 158 |
| MS.gene38435.t1 | AT1G05160 | 26.649 | 379 | 272 | 5 | 6 | 380 | 48 | 424 | 3.24e-44 | 160 |
| MS.gene38435.t1 | AT1G05160 | 26.649 | 379 | 272 | 5 | 6 | 380 | 48 | 424 | 3.24e-44 | 160 |
| MS.gene38435.t1 | AT5G38970 | 28.877 | 374 | 245 | 8 | 6 | 374 | 37 | 394 | 7.49e-44 | 158 |
| MS.gene38435.t1 | AT1G19630 | 26.649 | 379 | 268 | 8 | 6 | 380 | 38 | 410 | 3.75e-42 | 153 |
| MS.gene38435.t1 | AT1G19630 | 26.720 | 378 | 267 | 8 | 6 | 379 | 38 | 409 | 5.83e-42 | 153 |
| MS.gene38435.t1 | AT1G19630 | 26.738 | 374 | 264 | 8 | 6 | 375 | 38 | 405 | 6.98e-42 | 152 |
| MS.gene38435.t1 | AT5G14400 | 29.155 | 343 | 220 | 8 | 8 | 340 | 1 | 330 | 1.31e-41 | 149 |
| MS.gene38435.t1 | AT1G12740 | 27.596 | 337 | 236 | 4 | 6 | 340 | 34 | 364 | 1.58e-41 | 150 |
| MS.gene38435.t1 | AT5G36140 | 32.394 | 284 | 179 | 6 | 6 | 284 | 36 | 311 | 5.56e-41 | 147 |
| MS.gene38435.t1 | AT3G30180 | 27.540 | 374 | 250 | 7 | 6 | 374 | 37 | 394 | 1.79e-40 | 149 |
| MS.gene38435.t1 | AT4G36380 | 26.176 | 340 | 241 | 4 | 6 | 340 | 72 | 406 | 1.12e-36 | 138 |
| MS.gene38435.t1 | AT2G29090 | 27.492 | 331 | 226 | 4 | 55 | 380 | 2 | 323 | 4.58e-36 | 135 |
| MS.gene38435.t1 | AT1G55940 | 27.368 | 380 | 260 | 11 | 6 | 375 | 48 | 421 | 5.22e-33 | 129 |
| MS.gene38435.t1 | AT1G55940 | 27.632 | 380 | 259 | 11 | 6 | 375 | 48 | 421 | 8.67e-33 | 129 |
| MS.gene38435.t1 | AT3G44970 | 28.000 | 375 | 258 | 6 | 6 | 375 | 38 | 405 | 1.15e-31 | 125 |
| MS.gene38435.t1 | AT1G73340 | 24.468 | 376 | 265 | 5 | 6 | 377 | 46 | 406 | 5.53e-31 | 123 |
| MS.gene38435.t1 | AT5G38970 | 27.586 | 319 | 215 | 7 | 61 | 374 | 6 | 313 | 9.81e-31 | 121 |
| MS.gene38435.t1 | AT5G38970 | 27.586 | 319 | 215 | 7 | 61 | 374 | 6 | 313 | 9.81e-31 | 121 |
| MS.gene38435.t1 | AT5G14400 | 26.911 | 327 | 198 | 9 | 63 | 379 | 2 | 297 | 2.50e-30 | 119 |
| MS.gene38435.t1 | AT1G78490 | 26.735 | 389 | 245 | 12 | 6 | 375 | 38 | 405 | 1.89e-28 | 115 |
| MS.gene38435.t1 | AT1G78490 | 27.105 | 380 | 255 | 12 | 6 | 375 | 38 | 405 | 4.11e-28 | 115 |
| MS.gene38435.t1 | AT5G48000 | 26.302 | 384 | 253 | 11 | 6 | 375 | 38 | 405 | 7.45e-28 | 114 |
| MS.gene38435.t1 | AT5G48000 | 26.302 | 384 | 253 | 11 | 6 | 375 | 38 | 405 | 7.45e-28 | 114 |
| MS.gene38435.t1 | AT5G48000 | 26.302 | 384 | 253 | 11 | 6 | 375 | 38 | 405 | 7.45e-28 | 114 |
| MS.gene38435.t1 | AT5G48000 | 26.302 | 384 | 253 | 11 | 6 | 375 | 38 | 405 | 7.45e-28 | 114 |
| MS.gene38435.t1 | AT5G48000 | 26.302 | 384 | 253 | 11 | 6 | 375 | 38 | 405 | 7.45e-28 | 114 |
| MS.gene38435.t1 | AT5G48000 | 26.302 | 384 | 253 | 11 | 6 | 375 | 38 | 405 | 7.45e-28 | 114 |
| MS.gene38435.t1 | AT5G48000 | 26.302 | 384 | 253 | 11 | 6 | 375 | 79 | 446 | 2.08e-27 | 114 |
| MS.gene38435.t1 | AT1G65670 | 23.138 | 376 | 267 | 5 | 6 | 376 | 38 | 396 | 2.88e-27 | 113 |
| MS.gene38435.t1 | AT4G15300 | 23.280 | 378 | 268 | 7 | 6 | 376 | 38 | 400 | 2.09e-25 | 107 |
| MS.gene38435.t1 | AT4G15300 | 23.280 | 378 | 268 | 7 | 6 | 376 | 28 | 390 | 2.46e-25 | 107 |
| MS.gene38435.t1 | AT2G29090 | 26.022 | 269 | 181 | 5 | 6 | 269 | 52 | 307 | 3.04e-23 | 99.8 |
| MS.gene38435.t1 | AT5G36130 | 53.623 | 69 | 32 | 0 | 308 | 376 | 1 | 69 | 2.10e-22 | 92.4 |
| MS.gene38435.t1 | AT4G15393 | 22.460 | 374 | 275 | 8 | 6 | 376 | 38 | 399 | 2.34e-22 | 98.2 |
| MS.gene38435.t1 | AT4G15393 | 22.460 | 374 | 275 | 8 | 6 | 376 | 38 | 399 | 5.88e-22 | 97.4 |
| MS.gene38435.t1 | AT4G15396 | 23.560 | 382 | 261 | 11 | 6 | 375 | 38 | 400 | 7.91e-22 | 96.7 |
| MS.gene38435.t1 | AT5G05690 | 24.104 | 307 | 200 | 7 | 94 | 384 | 3 | 292 | 1.44e-21 | 95.1 |
| MS.gene38435.t1 | AT4G15396 | 23.238 | 383 | 263 | 10 | 6 | 376 | 38 | 401 | 1.70e-21 | 96.3 |
| MS.gene38435.t1 | AT4G15396 | 23.238 | 383 | 263 | 10 | 6 | 376 | 38 | 401 | 1.77e-21 | 96.3 |
| MS.gene38435.t1 | AT4G15300 | 21.250 | 400 | 271 | 9 | 6 | 376 | 28 | 412 | 8.41e-17 | 82.4 |
| MS.gene38435.t1 | AT4G15396 | 23.362 | 351 | 239 | 10 | 6 | 344 | 38 | 370 | 2.07e-16 | 80.9 |
| MS.gene38435.t1 | AT3G44970 | 25.552 | 317 | 228 | 4 | 6 | 319 | 38 | 349 | 3.32e-16 | 79.7 |
| MS.gene38435.t1 | AT3G10560 | 23.678 | 397 | 260 | 13 | 6 | 374 | 49 | 430 | 1.62e-15 | 78.6 |
| MS.gene38435.t1 | AT5G04630 | 23.134 | 402 | 260 | 16 | 6 | 374 | 41 | 426 | 1.57e-14 | 75.5 |
| MS.gene38435.t1 | AT1G11600 | 23.659 | 410 | 251 | 15 | 6 | 374 | 38 | 426 | 3.04e-14 | 74.7 |
| MS.gene38435.t1 | AT2G34490 | 23.214 | 392 | 254 | 15 | 11 | 375 | 45 | 416 | 5.49e-14 | 73.6 |
| MS.gene38435.t1 | AT4G15310 | 20.635 | 378 | 280 | 9 | 6 | 376 | 39 | 403 | 1.05e-13 | 72.8 |
| MS.gene38435.t1 | AT2G34500 | 24.290 | 317 | 206 | 10 | 78 | 375 | 110 | 411 | 2.68e-13 | 71.6 |
| MS.gene38435.t1 | AT1G11680 | 22.572 | 381 | 258 | 11 | 11 | 374 | 48 | 408 | 3.76e-13 | 71.2 |
| MS.gene38435.t1 | AT2G45550 | 23.978 | 367 | 239 | 13 | 39 | 374 | 69 | 426 | 4.61e-13 | 70.9 |
| MS.gene38435.t1 | AT4G37410 | 23.161 | 367 | 235 | 13 | 39 | 374 | 62 | 412 | 5.93e-13 | 70.5 |
| MS.gene38435.t1 | AT2G22330 | 28.902 | 173 | 117 | 3 | 206 | 376 | 310 | 478 | 7.29e-13 | 70.5 |
| MS.gene38435.t1 | AT2G22330 | 28.902 | 173 | 117 | 3 | 206 | 376 | 287 | 455 | 8.46e-13 | 70.1 |
| MS.gene38435.t1 | AT5G08250 | 22.531 | 324 | 223 | 9 | 79 | 374 | 77 | 400 | 1.41e-12 | 69.3 |
| MS.gene38435.t1 | AT5G08250 | 22.531 | 324 | 223 | 9 | 79 | 374 | 139 | 462 | 2.27e-12 | 68.9 |
| MS.gene38435.t1 | AT5G04660 | 24.397 | 373 | 245 | 12 | 30 | 374 | 66 | 429 | 2.54e-12 | 68.6 |
| MS.gene38435.t1 | AT4G37330 | 24.185 | 368 | 227 | 12 | 40 | 375 | 66 | 413 | 3.71e-12 | 68.2 |
| MS.gene38435.t1 | AT4G39950 | 23.951 | 405 | 264 | 14 | 6 | 376 | 59 | 453 | 7.36e-12 | 67.4 |
| MS.gene38435.t1 | AT4G39950 | 23.951 | 405 | 264 | 14 | 6 | 376 | 99 | 493 | 8.84e-12 | 67.0 |
| MS.gene38435.t1 | AT5G58860 | 26.038 | 265 | 179 | 8 | 127 | 374 | 165 | 429 | 1.05e-11 | 66.6 |
| MS.gene38435.t1 | AT3G10570 | 22.917 | 384 | 236 | 13 | 30 | 374 | 68 | 430 | 1.37e-11 | 66.2 |
| MS.gene38435.t1 | AT5G23190 | 26.257 | 179 | 121 | 5 | 207 | 374 | 286 | 464 | 1.47e-11 | 66.2 |
| MS.gene38435.t1 | AT1G16400 | 24.542 | 273 | 165 | 10 | 133 | 373 | 179 | 442 | 2.40e-11 | 65.5 |
| MS.gene38435.t1 | AT1G33720 | 22.888 | 367 | 243 | 12 | 39 | 374 | 69 | 426 | 8.43e-11 | 63.9 |
Find 84 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTGTCTTCTTGCAATA+AGG | 0.216651 | 3.4:-63398801 | MS.gene38435:CDS |
| TCCCCTACAGTGTTTATTAT+TGG | 0.217404 | 3.4:-63400410 | MS.gene38435:CDS |
| CTCCCTTGTTTGGTGGATTT+AGG | 0.221627 | 3.4:-63398130 | MS.gene38435:CDS |
| ATTTCCCTGGCACCTCATTT+TGG | 0.224462 | 3.4:-63398930 | MS.gene38435:CDS |
| AGTTTCTTGTTTAGGTATAT+TGG | 0.232703 | 3.4:-63397979 | MS.gene38435:intron |
| TCTTTGGGGTATCCTATTAT+TGG | 0.246365 | 3.4:-63400539 | MS.gene38435:CDS |
| CAATTCTTGCTCTAGCCTTT+TGG | 0.256516 | 3.4:+63398902 | None:intergenic |
| AAATGTTCCAAAAGGGTCTT+TGG | 0.266253 | 3.4:-63400555 | MS.gene38435:intron |
| CAAACCCTAGCTGAACTTAT+AGG | 0.271100 | 3.4:-63400299 | MS.gene38435:CDS |
| CAAGGAAACAAGTTTATTCT+TGG | 0.285786 | 3.4:-63400383 | MS.gene38435:CDS |
| TTCTTGTCTTCTTGCAATAA+GGG | 0.290028 | 3.4:-63398800 | MS.gene38435:CDS |
| TCAAGTGTTTCTCCAATAAT+AGG | 0.290870 | 3.4:+63400527 | None:intergenic |
| CTCTTATGAGCTTGATGATA+TGG | 0.317159 | 3.4:-63398693 | MS.gene38435:CDS |
| GTTTCTTGTTTAGGTATATT+GGG | 0.337285 | 3.4:-63397978 | MS.gene38435:intron |
| CGAGATGGTTCAAACTTGTA+TGG | 0.363230 | 3.4:+63397914 | None:intergenic |
| AACAACACCTGCCACCCTTT+TGG | 0.363322 | 3.4:+63398068 | None:intergenic |
| GAAGAAACTGTCCTATGATA+TGG | 0.372769 | 3.4:-63399049 | MS.gene38435:CDS |
| AATGTTCCAAAAGGGTCTTT+GGG | 0.394589 | 3.4:-63400554 | MS.gene38435:intron |
| AGGATGATCCCTCCCTTGTT+TGG | 0.399326 | 3.4:-63398140 | MS.gene38435:CDS |
| AGTTAACAGAATATTACTTA+AGG | 0.412817 | 3.4:-63399112 | MS.gene38435:CDS |
| ATTCCTTTATGCAGAACAAA+TGG | 0.414080 | 3.4:-63398258 | MS.gene38435:intron |
| AAGGGTGGGATTGGCTTGGT+TGG | 0.421963 | 3.4:+63397881 | None:intergenic |
| GAAGAAAGGGTATCTAAATA+TGG | 0.423206 | 3.4:-63400461 | MS.gene38435:CDS |
| TTCCTATTATGAACAAAAGA+AGG | 0.431903 | 3.4:-63398867 | MS.gene38435:CDS |
| ATGATCCCTCCCTTGTTTGG+TGG | 0.435807 | 3.4:-63398137 | MS.gene38435:CDS |
| AGTTAAGTAAAGGGTGGGAT+TGG | 0.449326 | 3.4:+63397872 | None:intergenic |
| CCTACCATTCAAAAGATACT+TGG | 0.452384 | 3.4:-63400326 | MS.gene38435:CDS |
| CAAGGATATGACATACCAAA+AGG | 0.468207 | 3.4:-63398083 | MS.gene38435:CDS |
| GTCCAATAATAAACACTGTA+GGG | 0.471515 | 3.4:+63400408 | None:intergenic |
| TAAAGCACAAAGGCAAGATA+AGG | 0.473516 | 3.4:-63400498 | MS.gene38435:CDS |
| AGAAGGGAGGATTTGTCAAA+AGG | 0.477197 | 3.4:-63398850 | MS.gene38435:CDS |
| CCAAATGGAAGTTAAGTAAA+GGG | 0.485604 | 3.4:+63397863 | None:intergenic |
| AGTAAAGGGTGGGATTGGCT+TGG | 0.495285 | 3.4:+63397877 | None:intergenic |
| GAGGTGCCAGGGAAATTGAT+TGG | 0.495782 | 3.4:+63398937 | None:intergenic |
| CCTCTCCAAAATGAGGTGCC+AGG | 0.496307 | 3.4:+63398925 | None:intergenic |
| ACCAAATGGAAGTTAAGTAA+AGG | 0.496891 | 3.4:+63397862 | None:intergenic |
| GATCAGATGGCTCACGTGCT+AGG | 0.498867 | 3.4:-63401492 | None:intergenic |
| GCATATCATTAGTAGAGCTT+AGG | 0.499290 | 3.4:+63398824 | None:intergenic |
| AAAGCACAAAGGCAAGATAA+GGG | 0.503390 | 3.4:-63400497 | MS.gene38435:CDS |
| TTGATCCTATAAGTTCAGCT+AGG | 0.507385 | 3.4:+63400294 | None:intergenic |
| GCTCTGAGTGGATAGAAGAA+AGG | 0.519240 | 3.4:-63400475 | MS.gene38435:CDS |
| CTCTGAGTGGATAGAAGAAA+GGG | 0.520937 | 3.4:-63400474 | MS.gene38435:CDS |
| TTTCCTAAATCCACCAAACA+AGG | 0.523989 | 3.4:+63398127 | None:intergenic |
| TACATTGGAAGCCATATCAT+AGG | 0.524278 | 3.4:+63399038 | None:intergenic |
| GAAATGAAGAAAGGCTAGCA+TGG | 0.528875 | 3.4:-63398214 | MS.gene38435:CDS |
| TAGCTGAACTTATAGGATCA+AGG | 0.533992 | 3.4:-63400292 | MS.gene38435:intron |
| TCTCTTCCAATCAATTTCCC+TGG | 0.538523 | 3.4:-63398943 | MS.gene38435:CDS |
| TGTCCAATAATAAACACTGT+AGG | 0.541231 | 3.4:+63400407 | None:intergenic |
| TGACATACCAAAAGGGTGGC+AGG | 0.541264 | 3.4:-63398075 | MS.gene38435:intron |
| GTGCAGGCACAGGTTAGTGA+AGG | 0.541453 | 3.4:-63399199 | MS.gene38435:intron |
| ATCTATGTCAAACAATACAT+TGG | 0.547338 | 3.4:+63399023 | None:intergenic |
| CTCTCCAAAATGAGGTGCCA+GGG | 0.550512 | 3.4:+63398926 | None:intergenic |
| TGATCCTATAAGTTCAGCTA+GGG | 0.551541 | 3.4:+63400295 | None:intergenic |
| AAGGATATGACATACCAAAA+GGG | 0.556236 | 3.4:-63398082 | MS.gene38435:CDS |
| CACTGTAGGGGAACCCAGCA+AGG | 0.556256 | 3.4:+63400421 | None:intergenic |
| AAATGAAGAAAGGCTAGCAT+GGG | 0.565900 | 3.4:-63398213 | MS.gene38435:CDS |
| GAAGTTATCTAGAGATCAAG+AGG | 0.566790 | 3.4:-63398671 | MS.gene38435:CDS |
| TAGGTATATTGGGCATCAAG+TGG | 0.569167 | 3.4:-63397968 | MS.gene38435:CDS |
| CAGGCACAGGTTAGTGAAGG+GGG | 0.578610 | 3.4:-63399196 | MS.gene38435:CDS |
| AAAGGGAAGGAAATGAAGAA+AGG | 0.580570 | 3.4:-63398223 | MS.gene38435:CDS |
| ATAAAACAATTGAAGTTGTG+AGG | 0.580685 | 3.4:-63399077 | MS.gene38435:CDS |
| TCCTATTATGAACAAAAGAA+GGG | 0.587101 | 3.4:-63398866 | MS.gene38435:CDS |
| ATGGAAGTTAAGTAAAGGGT+GGG | 0.598538 | 3.4:+63397867 | None:intergenic |
| AATGGAAGTTAAGTAAAGGG+TGG | 0.606532 | 3.4:+63397866 | None:intergenic |
| TAAATCCACCAAACAAGGGA+GGG | 0.610091 | 3.4:+63398132 | None:intergenic |
| TGCAGGCACAGGTTAGTGAA+GGG | 0.612093 | 3.4:-63399198 | MS.gene38435:intron |
| CTTAAAGATACTAGCTACCA+AGG | 0.614804 | 3.4:-63398101 | MS.gene38435:CDS |
| ATGTTCCAAAAGGGTCTTTG+GGG | 0.618224 | 3.4:-63400553 | MS.gene38435:intron |
| TCCAATAATAAACACTGTAG+GGG | 0.619302 | 3.4:+63400409 | None:intergenic |
| GCAGGCACAGGTTAGTGAAG+GGG | 0.621107 | 3.4:-63399197 | MS.gene38435:intron |
| GTAATTATGTCATCAGCTAG+AGG | 0.627210 | 3.4:+63398763 | None:intergenic |
| GTGTTTATTATTGGACAACA+AGG | 0.637606 | 3.4:-63400401 | MS.gene38435:CDS |
| TATTATGAACAAAAGAAGGG+AGG | 0.641657 | 3.4:-63398863 | MS.gene38435:CDS |
| AGCAGACAAAACATCATCTG+AGG | 0.643135 | 3.4:+63400358 | None:intergenic |
| TACAAAAGATGAAATACACA+TGG | 0.649342 | 3.4:-63398184 | MS.gene38435:CDS |
| TTCCTAAATCCACCAAACAA+GGG | 0.651412 | 3.4:+63398128 | None:intergenic |
| CTAAATCCACCAAACAAGGG+AGG | 0.656656 | 3.4:+63398131 | None:intergenic |
| TTGACATAGATGATCACACA+AGG | 0.668771 | 3.4:-63399011 | MS.gene38435:CDS |
| GGCAAGATAAGGGCTCTGAG+TGG | 0.693628 | 3.4:-63400487 | MS.gene38435:CDS |
| GATATGACATACCAAAAGGG+TGG | 0.696209 | 3.4:-63398079 | MS.gene38435:CDS |
| GAGTTGCTCAAGAATTGATG+AGG | 0.701801 | 3.4:-63398160 | MS.gene38435:CDS |
| AATGAAGAAAGGCTAGCATG+GGG | 0.726113 | 3.4:-63398212 | MS.gene38435:CDS |
| TGTAGGGGAACCCAGCAAGG+AGG | 0.735918 | 3.4:+63400424 | None:intergenic |
| TGACATAGATGATCACACAA+GGG | 0.752127 | 3.4:-63399010 | MS.gene38435:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr3.4:63398391-63398410 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr3.4:63398392-63398411 | None:intergenic | 10.0% |
| !! | TTAATGAATAAATAATGTAT+CGG | - | chr3.4:63399353-63399372 | MS.gene38435:intron | 10.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr3.4:63398390-63398409 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr3.4:63398326-63398345 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr3.4:63398327-63398346 | None:intergenic | 15.0% |
| !! | TGAATCTGATTTAATAAAAT+AGG | - | chr3.4:63397900-63397919 | MS.gene38435:CDS | 15.0% |
| !!! | AAATTTTCACTTTTTATTAG+TGG | - | chr3.4:63401322-63401341 | MS.gene38435:intron | 15.0% |
| !!! | AAGAGAAATCATATTTTTAA+GGG | - | chr3.4:63399169-63399188 | MS.gene38435:CDS | 15.0% |
| !!! | CAAAATTTTGCATAATATAA+AGG | - | chr3.4:63399984-63400003 | MS.gene38435:intron | 15.0% |
| !!! | CTAATAAAAAGTGAAAATTT+TGG | + | chr3.4:63401322-63401341 | None:intergenic | 15.0% |
| !!! | CTTTATATTATGCAAAATTT+TGG | + | chr3.4:63399986-63400005 | None:intergenic | 15.0% |
| !!! | TAAAAAATTATTTTGACAAG+AGG | + | chr3.4:63399922-63399941 | None:intergenic | 15.0% |
| !!! | TAAATTAGTCTGTTAAAAAT+AGG | + | chr3.4:63399552-63399571 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGATTCTTTTTTA+AGG | - | chr3.4:63399325-63399344 | MS.gene38435:intron | 15.0% |
| !!! | TTAATTTGGATATAATCTTT+GGG | + | chr3.4:63398498-63398517 | None:intergenic | 15.0% |
| !!! | TTTAAAACAACAATTTAAGT+TGG | + | chr3.4:63399123-63399142 | None:intergenic | 15.0% |
| !!! | TTTAATTTGGATATAATCTT+TGG | + | chr3.4:63398499-63398518 | None:intergenic | 15.0% |
| !! | AAACAAAAAATGTTCCAAAA+GGG | - | chr3.4:63398798-63398817 | MS.gene38435:CDS | 20.0% |
| !! | AGTTAACAGAATATTACTTA+AGG | - | chr3.4:63400248-63400267 | MS.gene38435:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr3.4:63398294-63398313 | None:intergenic | 20.0% |
| !! | ATTCCATATTCCAAAAAAAA+AGG | - | chr3.4:63400771-63400790 | MS.gene38435:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr3.4:63398293-63398312 | None:intergenic | 20.0% |
| !! | TAAAAACTATAACAAACGAA+TGG | + | chr3.4:63400853-63400872 | None:intergenic | 20.0% |
| !! | TATAATCTTGATTCAAACAA+TGG | - | chr3.4:63400051-63400070 | MS.gene38435:intron | 20.0% |
| !! | TTCCATATTCCAAAAAAAAA+GGG | - | chr3.4:63400772-63400791 | MS.gene38435:intron | 20.0% |
| !! | TTGAATCAAGATTATAATCA+AGG | + | chr3.4:63400047-63400066 | None:intergenic | 20.0% |
| !!! | AAATGGAAATTTTAAAGCAA+AGG | - | chr3.4:63401119-63401138 | MS.gene38435:intron | 20.0% |
| !!! | AATGGAAATTTTAAAGCAAA+GGG | - | chr3.4:63401120-63401139 | MS.gene38435:intron | 20.0% |
| !!! | ATGAGTCTTATGTTTATTTT+TGG | - | chr3.4:63400139-63400158 | MS.gene38435:intron | 20.0% |
| !!! | CATAGTAGCATTTTTTAATT+TGG | + | chr3.4:63398512-63398531 | None:intergenic | 20.0% |
| !!! | GAAGAGAAATCATATTTTTA+AGG | - | chr3.4:63399168-63399187 | MS.gene38435:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr3.4:63398257-63398276 | None:intergenic | 20.0% |
| !!! | GTTTACAATAAAGTTTTAGA+AGG | - | chr3.4:63400711-63400730 | MS.gene38435:intron | 20.0% |
| !!! | TAAGAAAAGATTCATTTTTC+AGG | + | chr3.4:63399433-63399452 | None:intergenic | 20.0% |
| !!! | TTAATATGAGTTTCTTGTTT+AGG | - | chr3.4:63401373-63401392 | MS.gene38435:intron | 20.0% |
| !!! | TTTTTGAGAGAATTTTTTTG+AGG | + | chr3.4:63398775-63398794 | None:intergenic | 20.0% |
| ! | ACACTAAAAGAAATCACTTA+AGG | - | chr3.4:63400821-63400840 | MS.gene38435:intron | 25.0% |
| ! | ATAAAACAATTGAAGTTGTG+AGG | - | chr3.4:63400283-63400302 | MS.gene38435:intron | 25.0% |
| ! | ATCTATGTCAAACAATACAT+TGG | + | chr3.4:63400340-63400359 | None:intergenic | 25.0% |
| ! | ATTAACCATTCACTTTAACA+CGG | + | chr3.4:63399809-63399828 | None:intergenic | 25.0% |
| ! | CAAACAAAAAATGTTCCAAA+AGG | - | chr3.4:63398797-63398816 | MS.gene38435:CDS | 25.0% |
| ! | CAAATATACATGATATTCAC+CGG | + | chr3.4:63399761-63399780 | None:intergenic | 25.0% |
| ! | CTCTCAATGAATTAGATTAT+TGG | - | chr3.4:63398537-63398556 | MS.gene38435:intron | 25.0% |
| ! | TACAAAAGATGAAATACACA+TGG | - | chr3.4:63401176-63401195 | MS.gene38435:intron | 25.0% |
| ! | TATCTCTCTAAATAAAGAGT+AGG | + | chr3.4:63398145-63398164 | None:intergenic | 25.0% |
| ! | TCAAAACTATGTGAAAAAGA+TGG | - | chr3.4:63400218-63400237 | MS.gene38435:intron | 25.0% |
| ! | TCCTATTATGAACAAAAGAA+GGG | - | chr3.4:63400494-63400513 | MS.gene38435:CDS | 25.0% |
| ! | TCTCTCATCTAATTTCTAAA+TGG | - | chr3.4:63398697-63398716 | MS.gene38435:CDS | 25.0% |
| ! | TTCCTATTATGAACAAAAGA+AGG | - | chr3.4:63400493-63400512 | MS.gene38435:CDS | 25.0% |
| !! | AAAACTTTAAAGAGAGACTA+AGG | + | chr3.4:63401077-63401096 | None:intergenic | 25.0% |
| !! | AAACTTTAAAGAGAGACTAA+GGG | + | chr3.4:63401076-63401095 | None:intergenic | 25.0% |
| !! | AGTTTCTTGTTTAGGTATAT+TGG | - | chr3.4:63401381-63401400 | MS.gene38435:intron | 25.0% |
| !! | GTTTCTTGTTTAGGTATATT+GGG | - | chr3.4:63401382-63401401 | MS.gene38435:intron | 25.0% |
| !! | TACTAGGATTTTGTCTATTT+TGG | - | chr3.4:63398020-63398039 | MS.gene38435:intron | 25.0% |
| !! | TCAAGTGTTTTCTTTTGTAT+TGG | - | chr3.4:63399478-63399497 | MS.gene38435:intron | 25.0% |
| !! | TTGATTTTCTTAAAGCACAA+AGG | - | chr3.4:63398852-63398871 | MS.gene38435:CDS | 25.0% |
| !!! | AAAACAAAGCCCTTTTTTTT+TGG | + | chr3.4:63400784-63400803 | None:intergenic | 25.0% |
| !!! | GAGAATTTTCAAGTGTTTTT+TGG | - | chr3.4:63399267-63399286 | MS.gene38435:intron | 25.0% |
| !!! | GATTTTGATGCAATTTTACT+AGG | - | chr3.4:63398004-63398023 | MS.gene38435:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr3.4:63398258-63398277 | None:intergenic | 25.0% |
| !!! | TATTTTTTATGTTCGAGCAA+TGG | + | chr3.4:63398184-63398203 | None:intergenic | 25.0% |
| !!! | TCTATTTTGGAATTCTACTA+TGG | - | chr3.4:63398033-63398052 | MS.gene38435:intron | 25.0% |
| !!! | TCTTTTTCACATAGTTTTGA+AGG | + | chr3.4:63400218-63400237 | None:intergenic | 25.0% |
| !!! | TGTTTTCTTTTGTATTGGTT+AGG | - | chr3.4:63399483-63399502 | MS.gene38435:intron | 25.0% |
| AAATCCTAGATGGTTTAAGT+CGG | - | chr3.4:63398087-63398106 | MS.gene38435:CDS | 30.0% | |
| AAATTTGACATCAGCTTAGA+TGG | + | chr3.4:63399885-63399904 | None:intergenic | 30.0% | |
| AAGGATATGACATACCAAAA+GGG | - | chr3.4:63401278-63401297 | MS.gene38435:intron | 30.0% | |
| AATAAAAGCTATTGTGTCTG+TGG | + | chr3.4:63400983-63401002 | None:intergenic | 30.0% | |
| AGTGCACATAATACAATGAA+AGG | + | chr3.4:63398731-63398750 | None:intergenic | 30.0% | |
| ATGAGAGACTTAAGATCATT+CGG | + | chr3.4:63398685-63398704 | None:intergenic | 30.0% | |
| ATTCCTTTATGCAGAACAAA+TGG | - | chr3.4:63401102-63401121 | MS.gene38435:intron | 30.0% | |
| CAAGGAAACAAGTTTATTCT+TGG | - | chr3.4:63398977-63398996 | MS.gene38435:CDS | 30.0% | |
| GTAATGTAATGAAGAGACAT+TGG | + | chr3.4:63398605-63398624 | None:intergenic | 30.0% | |
| GTCCAATAATAAACACTGTA+GGG | + | chr3.4:63398955-63398974 | None:intergenic | 30.0% | |
| GTGTTTATTATTGGACAACA+AGG | - | chr3.4:63398959-63398978 | MS.gene38435:CDS | 30.0% | |
| GTTATCACAATTCAAATTCG+TGG | + | chr3.4:63399863-63399882 | None:intergenic | 30.0% | |
| TATTATGAACAAAAGAAGGG+AGG | - | chr3.4:63400497-63400516 | MS.gene38435:CDS | 30.0% | |
| TCAAGTGTTTCTCCAATAAT+AGG | + | chr3.4:63398836-63398855 | None:intergenic | 30.0% | |
| TCCAATAATAAACACTGTAG+GGG | + | chr3.4:63398954-63398973 | None:intergenic | 30.0% | |
| TGTCCAATAATAAACACTGT+AGG | + | chr3.4:63398956-63398975 | None:intergenic | 30.0% | |
| TTCTTGTCTTCTTGCAATAA+GGG | - | chr3.4:63400560-63400579 | MS.gene38435:intron | 30.0% | |
| TTTCCATTTGTTCTGCATAA+AGG | + | chr3.4:63401108-63401127 | None:intergenic | 30.0% | |
| TTTCTTGTCTTCTTGCAATA+AGG | - | chr3.4:63400559-63400578 | MS.gene38435:intron | 30.0% | |
| ! | AAGTATCTTTTGAATGGTAG+GGG | + | chr3.4:63399035-63399054 | None:intergenic | 30.0% |
| ! | ATAAATGATGCATTTGAGAC+CGG | + | chr3.4:63399402-63399421 | None:intergenic | 30.0% |
| ! | ATTAGTGGCACATATAGTTT+TGG | - | chr3.4:63401337-63401356 | MS.gene38435:intron | 30.0% |
| ! | CAAGTATCTTTTGAATGGTA+GGG | + | chr3.4:63399036-63399055 | None:intergenic | 30.0% |
| ! | CTTTCCAAGTATCTTTTGAA+TGG | + | chr3.4:63399041-63399060 | None:intergenic | 30.0% |
| ! | GATTAGTTGATATACTCACT+CGG | - | chr3.4:63399293-63399312 | MS.gene38435:intron | 30.0% |
| ! | TCCCTTCTTTTGTTCATAAT+AGG | + | chr3.4:63400498-63400517 | None:intergenic | 30.0% |
| ! | TGAAAAGTCCTTTGAAAAAC+CGG | + | chr3.4:63399230-63399249 | None:intergenic | 30.0% |
| ! | TTAGTGGCACATATAGTTTT+GGG | - | chr3.4:63401338-63401357 | MS.gene38435:intron | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr3.4:63398280-63398299 | None:intergenic | 30.0% |
| ! | TTTGAAACTCAAATTGTTGC+CGG | - | chr3.4:63399739-63399758 | MS.gene38435:intron | 30.0% |
| !! | GAAGAAAGGGTATCTAAATA+TGG | - | chr3.4:63398899-63398918 | MS.gene38435:CDS | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr3.4:63398279-63398298 | None:intergenic | 30.0% |
| !!! | AGCCCTTTTTTTTTGGAATA+TGG | + | chr3.4:63400777-63400796 | None:intergenic | 30.0% |
| !!! | CTTATGTTTATTTTTGGTGC+AGG | - | chr3.4:63400145-63400164 | MS.gene38435:intron | 30.0% |
| !!! | GAAATTTTAAAGCAAAGGGA+AGG | - | chr3.4:63401124-63401143 | MS.gene38435:intron | 30.0% |
| AAAGCACAAAGGCAAGATAA+GGG | - | chr3.4:63398863-63398882 | MS.gene38435:CDS | 35.0% | |
| AAAGGGAAGGAAATGAAGAA+AGG | - | chr3.4:63401137-63401156 | MS.gene38435:intron | 35.0% | |
| AAATGAAGAAAGGCTAGCAT+GGG | - | chr3.4:63401147-63401166 | MS.gene38435:intron | 35.0% | |
| AAATGTTCCAAAAGGGTCTT+TGG | - | chr3.4:63398805-63398824 | MS.gene38435:CDS | 35.0% | |
| AATCCTAGATGGTTTAAGTC+GGG | - | chr3.4:63398088-63398107 | MS.gene38435:CDS | 35.0% | |
| AATGTTCCAAAAGGGTCTTT+GGG | - | chr3.4:63398806-63398825 | MS.gene38435:CDS | 35.0% | |
| ACATTGGAAAGAGAAGACAT+TGG | + | chr3.4:63398589-63398608 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr3.4:63398244-63398263 | None:intergenic | 35.0% | |
| CAAAACCGTGTTAAAGTGAA+TGG | - | chr3.4:63399801-63399820 | MS.gene38435:intron | 35.0% | |
| CAAGGATATGACATACCAAA+AGG | - | chr3.4:63401277-63401296 | MS.gene38435:intron | 35.0% | |
| CAGCACTATTTGATCAAGAT+CGG | + | chr3.4:63397937-63397956 | None:intergenic | 35.0% | |
| CCTACCATTCAAAAGATACT+TGG | - | chr3.4:63399034-63399053 | MS.gene38435:CDS | 35.0% | |
| CTATGGATTTGAGTCATTGA+AGG | - | chr3.4:63398050-63398069 | MS.gene38435:intron | 35.0% | |
| CTTAAAGATACTAGCTACCA+AGG | - | chr3.4:63401259-63401278 | MS.gene38435:intron | 35.0% | |
| GAAGAAACTGTCCTATGATA+TGG | - | chr3.4:63400311-63400330 | MS.gene38435:CDS | 35.0% | |
| GAAGTTATCTAGAGATCAAG+AGG | - | chr3.4:63400689-63400708 | MS.gene38435:intron | 35.0% | |
| GAGGAGATAGAGATCATATA+TGG | + | chr3.4:63398645-63398664 | None:intergenic | 35.0% | |
| GCATATCATTAGTAGAGCTT+AGG | + | chr3.4:63400539-63400558 | None:intergenic | 35.0% | |
| GGATATAATCTTTGGGTCTA+CGG | + | chr3.4:63398491-63398510 | None:intergenic | 35.0% | |
| GTAATTATGTCATCAGCTAG+AGG | + | chr3.4:63400600-63400619 | None:intergenic | 35.0% | |
| GTATTACATTTGCAGCAGAA+TGG | + | chr3.4:63398211-63398230 | None:intergenic | 35.0% | |
| TAAAGCACAAAGGCAAGATA+AGG | - | chr3.4:63398862-63398881 | MS.gene38435:CDS | 35.0% | |
| TAAAGTCGCAAAATCCTAGA+TGG | - | chr3.4:63398077-63398096 | MS.gene38435:CDS | 35.0% | |
| TACATTGGAAGCCATATCAT+AGG | + | chr3.4:63400325-63400344 | None:intergenic | 35.0% | |
| TAGCTGAACTTATAGGATCA+AGG | - | chr3.4:63399068-63399087 | MS.gene38435:CDS | 35.0% | |
| TAGTAACGTTCGATATTGTC+TGG | + | chr3.4:63399698-63399717 | None:intergenic | 35.0% | |
| TCCCCTACAGTGTTTATTAT+TGG | - | chr3.4:63398950-63398969 | MS.gene38435:CDS | 35.0% | |
| TGACATAGATGATCACACAA+GGG | - | chr3.4:63400350-63400369 | MS.gene38435:CDS | 35.0% | |
| TGATCCTATAAGTTCAGCTA+GGG | + | chr3.4:63399068-63399087 | None:intergenic | 35.0% | |
| TTAAGGGAAATGCTTCTCTA+TGG | - | chr3.4:63399185-63399204 | MS.gene38435:CDS | 35.0% | |
| TTCCTAAATCCACCAAACAA+GGG | + | chr3.4:63401235-63401254 | None:intergenic | 35.0% | |
| TTCTTATATTCGAGACCGAA+GGG | - | chr3.4:63399447-63399466 | MS.gene38435:intron | 35.0% | |
| TTGACATAGATGATCACACA+AGG | - | chr3.4:63400349-63400368 | MS.gene38435:CDS | 35.0% | |
| TTGATCCTATAAGTTCAGCT+AGG | + | chr3.4:63399069-63399088 | None:intergenic | 35.0% | |
| TTTCCTAAATCCACCAAACA+AGG | + | chr3.4:63401236-63401255 | None:intergenic | 35.0% | |
| TTTCTTATATTCGAGACCGA+AGG | - | chr3.4:63399446-63399465 | MS.gene38435:intron | 35.0% | |
| ! | AGTATCTTTTGAATGGTAGG+GGG | + | chr3.4:63399034-63399053 | None:intergenic | 35.0% |
| ! | ATTAGTTGATATACTCCCTC+CGG | - | chr3.4:63399380-63399399 | MS.gene38435:intron | 35.0% |
| ! | CCAAGTATCTTTTGAATGGT+AGG | + | chr3.4:63399037-63399056 | None:intergenic | 35.0% |
| ! | CTCTTATGAGCTTGATGATA+TGG | - | chr3.4:63400667-63400686 | MS.gene38435:intron | 35.0% |
| ! | CTTTTGGTATGTCATATCCT+TGG | + | chr3.4:63401279-63401298 | None:intergenic | 35.0% |
| ! | GTTGGATTTTCAAAACGAGA+TGG | + | chr3.4:63401464-63401483 | None:intergenic | 35.0% |
| ! | TTTTATGTTCGAGCAATGGT+GGG | + | chr3.4:63398180-63398199 | None:intergenic | 35.0% |
| ! | TTTTTATGTTCGAGCAATGG+TGG | + | chr3.4:63398181-63398200 | None:intergenic | 35.0% |
| !! | TCTTTGGGGTATCCTATTAT+TGG | - | chr3.4:63398821-63398840 | MS.gene38435:CDS | 35.0% |
| !!! | ACATAGTTTTGAAGGCATTC+AGG | + | chr3.4:63400210-63400229 | None:intergenic | 35.0% |
| AACAATGGCGCTGTGAAATA+AGG | - | chr3.4:63400066-63400085 | MS.gene38435:intron | 40.0% | |
| AATCTGTGTGAAATGAGCCA+AGG | - | chr3.4:63398411-63398430 | MS.gene38435:intron | 40.0% | |
| AATGAAGAAAGGCTAGCATG+GGG | - | chr3.4:63401148-63401167 | MS.gene38435:intron | 40.0% | |
| AGAAGGGAGGATTTGTCAAA+AGG | - | chr3.4:63400510-63400529 | MS.gene38435:CDS | 40.0% | |
| AGCAGACAAAACATCATCTG+AGG | + | chr3.4:63399005-63399024 | None:intergenic | 40.0% | |
| AGCCAAGGGGTCAAATAAAT+TGG | - | chr3.4:63398426-63398445 | MS.gene38435:intron | 40.0% | |
| AGGGGTCAAATAAATTGGGA+CGG | - | chr3.4:63398431-63398450 | MS.gene38435:intron | 40.0% | |
| ATCCTAGATGGTTTAAGTCG+GGG | - | chr3.4:63398089-63398108 | MS.gene38435:CDS | 40.0% | |
| ATCTGTGTGAAATGAGCCAA+GGG | - | chr3.4:63398412-63398431 | MS.gene38435:intron | 40.0% | |
| ATGTTCCAAAAGGGTCTTTG+GGG | - | chr3.4:63398807-63398826 | MS.gene38435:CDS | 40.0% | |
| CAAACCCTAGCTGAACTTAT+AGG | - | chr3.4:63399061-63399080 | MS.gene38435:CDS | 40.0% | |
| CGAGATGGTTCAAACTTGTA+TGG | + | chr3.4:63401449-63401468 | None:intergenic | 40.0% | |
| CTCTGAGTGGATAGAAGAAA+GGG | - | chr3.4:63398886-63398905 | MS.gene38435:CDS | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr3.4:63398243-63398262 | None:intergenic | 40.0% | |
| GAAATGAAGAAAGGCTAGCA+TGG | - | chr3.4:63401146-63401165 | MS.gene38435:intron | 40.0% | |
| GAGTTGCTCAAGAATTGATG+AGG | - | chr3.4:63401200-63401219 | MS.gene38435:intron | 40.0% | |
| GATATGACATACCAAAAGGG+TGG | - | chr3.4:63401281-63401300 | MS.gene38435:intron | 40.0% | |
| GCCAAGGGGTCAAATAAATT+GGG | - | chr3.4:63398427-63398446 | MS.gene38435:intron | 40.0% | |
| GGAAAGAGAAGACATTGGTA+TGG | + | chr3.4:63398584-63398603 | None:intergenic | 40.0% | |
| GGTGTAGTACTAAACTCTTG+AGG | + | chr3.4:63398664-63398683 | None:intergenic | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | - | chr3.4:63398435-63398454 | MS.gene38435:intron | 40.0% | |
| TAAATCCACCAAACAAGGGA+GGG | + | chr3.4:63401231-63401250 | None:intergenic | 40.0% | |
| TAGGTATATTGGGCATCAAG+TGG | - | chr3.4:63401392-63401411 | MS.gene38435:intron | 40.0% | |
| TCCCAATTTATTTGACCCCT+TGG | + | chr3.4:63398431-63398450 | None:intergenic | 40.0% | |
| TCTCTTCCAATCAATTTCCC+TGG | - | chr3.4:63400417-63400436 | MS.gene38435:CDS | 40.0% | |
| TTTATGTTCGAGCAATGGTG+GGG | + | chr3.4:63398179-63398198 | None:intergenic | 40.0% | |
| ! | CACTTGATAACCAATCCCTT+CGG | + | chr3.4:63399465-63399484 | None:intergenic | 40.0% |
| ! | GTTTTCAAAACCTCCTTGCT+GGG | - | chr3.4:63398926-63398945 | MS.gene38435:CDS | 40.0% |
| ! | TGTTTTCAAAACCTCCTTGC+TGG | - | chr3.4:63398925-63398944 | MS.gene38435:CDS | 40.0% |
| !! | CAATTCTTGCTCTAGCCTTT+TGG | + | chr3.4:63400461-63400480 | None:intergenic | 40.0% |
| !!! | AGCAAGGAGGTTTTGAAAAC+AGG | + | chr3.4:63398926-63398945 | None:intergenic | 40.0% |
| !!! | TTTATTTTTGGTGCAGGCAC+AGG | - | chr3.4:63400151-63400170 | MS.gene38435:intron | 40.0% |
| ATATTCGAGACCGAAGGGAT+TGG | - | chr3.4:63399452-63399471 | MS.gene38435:intron | 45.0% | |
| ATCCCCGACTTAAACCATCT+AGG | + | chr3.4:63398094-63398113 | None:intergenic | 45.0% | |
| CTAAATCCACCAAACAAGGG+AGG | + | chr3.4:63401232-63401251 | None:intergenic | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | - | chr3.4:63398434-63398453 | MS.gene38435:intron | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+GGG | - | chr3.4:63398413-63398432 | MS.gene38435:intron | 45.0% | |
| TGCTGCTACGACTTCATGTA+TGG | - | chr3.4:63397964-63397983 | MS.gene38435:CDS | 45.0% | |
| ! | AATGATGCATTTGAGACCGG+AGG | + | chr3.4:63399399-63399418 | None:intergenic | 45.0% |
| ! | ATGATGCATTTGAGACCGGA+GGG | + | chr3.4:63399398-63399417 | None:intergenic | 45.0% |
| ! | ATTTCCCTGGCACCTCATTT+TGG | - | chr3.4:63400430-63400449 | MS.gene38435:CDS | 45.0% |
| ! | CTTTTGGCCTCTCCAAAATG+AGG | + | chr3.4:63400445-63400464 | None:intergenic | 45.0% |
| ! | GCTCTGAGTGGATAGAAGAA+AGG | - | chr3.4:63398885-63398904 | MS.gene38435:CDS | 45.0% |
| !! | CTCATTTTGGAGAGGCCAAA+AGG | - | chr3.4:63400443-63400462 | MS.gene38435:CDS | 45.0% |
| !! | CTCCCTTGTTTGGTGGATTT+AGG | - | chr3.4:63401230-63401249 | MS.gene38435:intron | 45.0% |
| ACAGTGTGTAGAGCACAGCA+TGG | - | chr3.4:63399516-63399535 | MS.gene38435:intron | 50.0% | |
| AGGATGATCCCTCCCTTGTT+TGG | - | chr3.4:63401220-63401239 | MS.gene38435:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr3.4:63398239-63398258 | None:intergenic | 50.0% | |
| ATGTAATACTCCCTCCGTCC+CGG | - | chr3.4:63398222-63398241 | MS.gene38435:CDS | 50.0% | |
| TGACATACCAAAAGGGTGGC+AGG | - | chr3.4:63401285-63401304 | MS.gene38435:intron | 50.0% | |
| TGCAGGCACAGGTTAGTGAA+GGG | - | chr3.4:63400162-63400181 | MS.gene38435:intron | 50.0% | |
| ! | AACAACACCTGCCACCCTTT+TGG | + | chr3.4:63401295-63401314 | None:intergenic | 50.0% |
| ! | ATGATCCCTCCCTTGTTTGG+TGG | - | chr3.4:63401223-63401242 | MS.gene38435:intron | 50.0% |
| ! | CCTTTGAAAAACCGGCTGAG+CGG | + | chr3.4:63399222-63399241 | None:intergenic | 50.0% |
| ! | CTCTCCAAAATGAGGTGCCA+GGG | + | chr3.4:63400437-63400456 | None:intergenic | 50.0% |
| ! | GAGGTGCCAGGGAAATTGAT+TGG | + | chr3.4:63400426-63400445 | None:intergenic | 50.0% |
| ! | GGATACCCCAAAGACCCTTT+TGG | + | chr3.4:63398815-63398834 | None:intergenic | 50.0% |
| !! | AGTAAAGGGTGGGATTGGCT+TGG | + | chr3.4:63401486-63401505 | None:intergenic | 50.0% |
| CAGGCACAGGTTAGTGAAGG+GGG | - | chr3.4:63400164-63400183 | MS.gene38435:intron | 55.0% | |
| GCAGGCACAGGTTAGTGAAG+GGG | - | chr3.4:63400163-63400182 | MS.gene38435:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr3.4:63398235-63398254 | None:intergenic | 55.0% | |
| GTGCAGGCACAGGTTAGTGA+AGG | - | chr3.4:63400161-63400180 | MS.gene38435:intron | 55.0% | |
| ! | CCTCTCCAAAATGAGGTGCC+AGG | + | chr3.4:63400438-63400457 | None:intergenic | 55.0% |
| ! | TTTCATACGTGCCGCTCAGC+CGG | - | chr3.4:63399208-63399227 | MS.gene38435:intron | 55.0% |
| !! | AAGGGTGGGATTGGCTTGGT+TGG | + | chr3.4:63401482-63401501 | None:intergenic | 55.0% |
| !! | CCGCTCAGCCGGTTTTTCAA+AGG | - | chr3.4:63399219-63399238 | MS.gene38435:intron | 55.0% |
| !! | CCTGGCACCTCATTTTGGAG+AGG | - | chr3.4:63400435-63400454 | MS.gene38435:CDS | 55.0% |
| !! | GGCAAGATAAGGGCTCTGAG+TGG | - | chr3.4:63398873-63398892 | MS.gene38435:CDS | 55.0% |
| CACTGTAGGGGAACCCAGCA+AGG | + | chr3.4:63398942-63398961 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr3.4:63398236-63398255 | None:intergenic | 60.0% | |
| TGTAGGGGAACCCAGCAAGG+AGG | + | chr3.4:63398939-63398958 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 63397874 | 63401508 | 63397874 | ID=MS.gene38435 |
| chr3.4 | mRNA | 63397874 | 63401508 | 63397874 | ID=MS.gene38435.t1;Parent=MS.gene38435 |
| chr3.4 | exon | 63401493 | 63401508 | 63401493 | ID=MS.gene38435.t1.exon1;Parent=MS.gene38435.t1 |
| chr3.4 | CDS | 63401493 | 63401508 | 63401493 | ID=cds.MS.gene38435.t1;Parent=MS.gene38435.t1 |
| chr3.4 | exon | 63400293 | 63400563 | 63400293 | ID=MS.gene38435.t1.exon2;Parent=MS.gene38435.t1 |
| chr3.4 | CDS | 63400293 | 63400563 | 63400293 | ID=cds.MS.gene38435.t1;Parent=MS.gene38435.t1 |
| chr3.4 | exon | 63398650 | 63399215 | 63398650 | ID=MS.gene38435.t1.exon3;Parent=MS.gene38435.t1 |
| chr3.4 | CDS | 63398650 | 63399215 | 63398650 | ID=cds.MS.gene38435.t1;Parent=MS.gene38435.t1 |
| chr3.4 | exon | 63398076 | 63398266 | 63398076 | ID=MS.gene38435.t1.exon4;Parent=MS.gene38435.t1 |
| chr3.4 | CDS | 63398076 | 63398266 | 63398076 | ID=cds.MS.gene38435.t1;Parent=MS.gene38435.t1 |
| chr3.4 | exon | 63397874 | 63397987 | 63397874 | ID=MS.gene38435.t1.exon5;Parent=MS.gene38435.t1 |
| chr3.4 | CDS | 63397874 | 63397987 | 63397874 | ID=cds.MS.gene38435.t1;Parent=MS.gene38435.t1 |
| Gene Sequence |
| Protein sequence |
