Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39037.t1 | XP_003624993.1 | 99.7 | 384 | 1 | 0 | 1 | 384 | 69 | 452 | 7.90E-159 | 570.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39037.t1 | Q41558 | 60.9 | 404 | 138 | 5 | 1 | 384 | 73 | 476 | 1.4e-108 | 394.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39037.t1 | G7KQS2 | 99.7 | 384 | 1 | 0 | 1 | 384 | 40 | 423 | 5.7e-159 | 570.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene39037.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene39037 | 0.854328 | 1.32E-61 | -1.69E-46 |
| MS.gene04919 | MS.gene39037 | 0.852438 | 4.62E-61 | -1.69E-46 |
| MS.gene04920 | MS.gene39037 | 0.866598 | 2.54E-65 | -1.69E-46 |
| MS.gene049254 | MS.gene39037 | 0.828078 | 1.10E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene39037 | 0.886867 | 2.35E-72 | -1.69E-46 |
| MS.gene049368 | MS.gene39037 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene049419 | MS.gene39037 | -0.826516 | 2.60E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene39037 | 0.876997 | 8.94E-69 | -1.69E-46 |
| MS.gene049652 | MS.gene39037 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene049680 | MS.gene39037 | 0.83347 | 5.24E-56 | -1.69E-46 |
| MS.gene049983 | MS.gene39037 | 0.862656 | 4.34E-64 | -1.69E-46 |
| MS.gene050081 | MS.gene39037 | 0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene050085 | MS.gene39037 | 0.805125 | 1.55E-49 | -1.69E-46 |
| MS.gene050271 | MS.gene39037 | 0.810576 | 1.08E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene39037 | 0.804692 | 1.91E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene39037 | 0.822939 | 1.81E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene39037 | 0.824404 | 8.22E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene39037 | 0.811641 | 6.33E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene39037 | 0.808672 | 2.76E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene39037 | 0.865396 | 6.09E-65 | -1.69E-46 |
| MS.gene050654 | MS.gene39037 | 0.814244 | 1.70E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene39037 | 0.805066 | 1.60E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene39037 | 0.881287 | 2.72E-70 | -1.69E-46 |
| MS.gene051003 | MS.gene39037 | 0.802586 | 5.23E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene39037 | 0.809807 | 1.58E-50 | -1.69E-46 |
| MS.gene051043 | MS.gene39037 | 0.841196 | 5.50E-58 | -1.69E-46 |
| MS.gene051154 | MS.gene39037 | 0.846531 | 2.05E-59 | -1.69E-46 |
| MS.gene051234 | MS.gene39037 | 0.80785 | 4.13E-50 | -1.69E-46 |
| MS.gene051332 | MS.gene39037 | 0.805494 | 1.30E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene39037 | 0.829929 | 3.91E-55 | -1.69E-46 |
| MS.gene051363 | MS.gene39037 | 0.821152 | 4.70E-53 | -1.69E-46 |
| MS.gene051365 | MS.gene39037 | 0.81784 | 2.68E-52 | -1.69E-46 |
| MS.gene051597 | MS.gene39037 | 0.832893 | 7.29E-56 | -1.69E-46 |
| MS.gene051637 | MS.gene39037 | 0.80876 | 2.64E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene39037 | 0.875556 | 2.81E-68 | -1.69E-46 |
| MS.gene051744 | MS.gene39037 | 0.820113 | 8.14E-53 | -1.69E-46 |
| MS.gene051832 | MS.gene39037 | 0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene051959 | MS.gene39037 | 0.808395 | 3.16E-50 | -1.69E-46 |
| MS.gene051960 | MS.gene39037 | 0.810345 | 1.21E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene39037 | 0.826438 | 2.71E-54 | -1.69E-46 |
| MS.gene052072 | MS.gene39037 | 0.861117 | 1.28E-63 | -1.69E-46 |
| MS.gene052108 | MS.gene39037 | 0.804159 | 2.47E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene39037 | 0.834326 | 3.20E-56 | -1.69E-46 |
| MS.gene052307 | MS.gene39037 | 0.845512 | 3.88E-59 | -1.69E-46 |
| MS.gene052463 | MS.gene39037 | 0.801551 | 8.54E-49 | -1.69E-46 |
| MS.gene052500 | MS.gene39037 | 0.804917 | 1.72E-49 | -1.69E-46 |
| MS.gene052518 | MS.gene39037 | 0.808429 | 3.11E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene39037 | 0.856675 | 2.74E-62 | -1.69E-46 |
| MS.gene052609 | MS.gene39037 | 0.818895 | 1.54E-52 | -1.69E-46 |
| MS.gene052685 | MS.gene39037 | 0.811969 | 5.37E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene39037 | 0.825403 | 4.78E-54 | -1.69E-46 |
| MS.gene052826 | MS.gene39037 | 0.80252 | 5.40E-49 | -1.69E-46 |
| MS.gene052932 | MS.gene39037 | 0.805367 | 1.38E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene39037 | 0.838628 | 2.57E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene39037 | 0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene053228 | MS.gene39037 | 0.820379 | 7.08E-53 | -1.69E-46 |
| MS.gene053272 | MS.gene39037 | -0.847424 | 1.17E-59 | -1.69E-46 |
| MS.gene053427 | MS.gene39037 | 0.818768 | 1.65E-52 | -1.69E-46 |
| MS.gene053542 | MS.gene39037 | 0.802853 | 4.61E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene39037 | 0.822738 | 2.02E-53 | -1.69E-46 |
| MS.gene053726 | MS.gene39037 | 0.808685 | 2.74E-50 | -1.69E-46 |
| MS.gene053879 | MS.gene39037 | 0.850016 | 2.23E-60 | -1.69E-46 |
| MS.gene053931 | MS.gene39037 | 0.823511 | 1.33E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene39037 | 0.846883 | 1.64E-59 | -1.69E-46 |
| MS.gene054004 | MS.gene39037 | 0.838696 | 2.47E-57 | -1.69E-46 |
| MS.gene054142 | MS.gene39037 | 0.806715 | 7.19E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene39037 | 0.835536 | 1.58E-56 | -1.69E-46 |
| MS.gene054413 | MS.gene39037 | 0.860127 | 2.56E-63 | -1.69E-46 |
| MS.gene054479 | MS.gene39037 | 0.822481 | 2.32E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene39037 | 0.831571 | 1.55E-55 | -1.69E-46 |
| MS.gene054684 | MS.gene39037 | 0.804897 | 1.73E-49 | -1.69E-46 |
| MS.gene054709 | MS.gene39037 | 0.809984 | 1.44E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene39037 | 0.865729 | 4.78E-65 | -1.69E-46 |
| MS.gene054893 | MS.gene39037 | 0.873823 | 1.09E-67 | -1.69E-46 |
| MS.gene054957 | MS.gene39037 | 0.869054 | 4.13E-66 | -1.69E-46 |
| MS.gene055147 | MS.gene39037 | 0.821636 | 3.63E-53 | -1.69E-46 |
| MS.gene055148 | MS.gene39037 | 0.818665 | 1.74E-52 | -1.69E-46 |
| MS.gene055150 | MS.gene39037 | 0.881615 | 2.07E-70 | -1.69E-46 |
| MS.gene055151 | MS.gene39037 | 0.807875 | 4.08E-50 | -1.69E-46 |
| MS.gene055155 | MS.gene39037 | 0.81065 | 1.04E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene39037 | 0.812992 | 3.21E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene39037 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene055724 | MS.gene39037 | 0.823003 | 1.75E-53 | -1.69E-46 |
| MS.gene055841 | MS.gene39037 | 0.836461 | 9.23E-57 | -1.69E-46 |
| MS.gene056045 | MS.gene39037 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene056071 | MS.gene39037 | 0.811255 | 7.67E-51 | -1.69E-46 |
| MS.gene05624 | MS.gene39037 | 0.808704 | 2.72E-50 | -1.69E-46 |
| MS.gene056363 | MS.gene39037 | 0.846394 | 2.23E-59 | -1.69E-46 |
| MS.gene056578 | MS.gene39037 | 0.805801 | 1.12E-49 | -1.69E-46 |
| MS.gene056677 | MS.gene39037 | 0.80658 | 7.68E-50 | -1.69E-46 |
| MS.gene05667 | MS.gene39037 | 0.820378 | 7.08E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene39037 | 0.853654 | 2.07E-61 | -1.69E-46 |
| MS.gene05686 | MS.gene39037 | 0.879301 | 1.39E-69 | -1.69E-46 |
| MS.gene05689 | MS.gene39037 | 0.808083 | 3.69E-50 | -1.69E-46 |
| MS.gene056973 | MS.gene39037 | 0.844753 | 6.22E-59 | -1.69E-46 |
| MS.gene056986 | MS.gene39037 | 0.825492 | 4.55E-54 | -1.69E-46 |
| MS.gene057034 | MS.gene39037 | 0.810908 | 9.12E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene39037 | 0.864291 | 1.35E-64 | -1.69E-46 |
| MS.gene057155 | MS.gene39037 | 0.802011 | 6.87E-49 | -1.69E-46 |
| MS.gene057174 | MS.gene39037 | 0.859404 | 4.23E-63 | -1.69E-46 |
| MS.gene057208 | MS.gene39037 | 0.866499 | 2.73E-65 | -1.69E-46 |
| MS.gene057371 | MS.gene39037 | 0.805668 | 1.19E-49 | -1.69E-46 |
| MS.gene057622 | MS.gene39037 | 0.831552 | 1.56E-55 | -1.69E-46 |
| MS.gene057893 | MS.gene39037 | -0.800365 | 1.49E-48 | -1.69E-46 |
| MS.gene058008 | MS.gene39037 | 0.847208 | 1.34E-59 | -1.69E-46 |
| MS.gene058009 | MS.gene39037 | 0.828119 | 1.07E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene39037 | 0.801332 | 9.47E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene39037 | 0.835535 | 1.59E-56 | -1.69E-46 |
| MS.gene058159 | MS.gene39037 | 0.852092 | 5.79E-61 | -1.69E-46 |
| MS.gene058279 | MS.gene39037 | 0.815543 | 8.76E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene39037 | 0.813306 | 2.74E-51 | -1.69E-46 |
| MS.gene058427 | MS.gene39037 | 0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene058592 | MS.gene39037 | 0.853591 | 2.16E-61 | -1.69E-46 |
| MS.gene058781 | MS.gene39037 | 0.904824 | 8.19E-80 | -1.69E-46 |
| MS.gene058783 | MS.gene39037 | 0.870432 | 1.47E-66 | -1.69E-46 |
| MS.gene05878 | MS.gene39037 | 0.876685 | 1.15E-68 | -1.69E-46 |
| MS.gene058979 | MS.gene39037 | 0.801104 | 1.05E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene39037 | 0.84701 | 1.52E-59 | -1.69E-46 |
| MS.gene059436 | MS.gene39037 | 0.80928 | 2.05E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene39037 | 0.90149 | 2.54E-78 | -1.69E-46 |
| MS.gene05956 | MS.gene39037 | 0.840863 | 6.73E-58 | -1.69E-46 |
| MS.gene059686 | MS.gene39037 | 0.800164 | 1.64E-48 | -1.69E-46 |
| MS.gene05985 | MS.gene39037 | -0.895674 | 7.66E-76 | -1.69E-46 |
| MS.gene059901 | MS.gene39037 | -0.842562 | 2.40E-58 | -1.69E-46 |
| MS.gene059965 | MS.gene39037 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene060012 | MS.gene39037 | 0.80338 | 3.58E-49 | -1.69E-46 |
| MS.gene06018 | MS.gene39037 | 0.80567 | 1.19E-49 | -1.69E-46 |
| MS.gene06023 | MS.gene39037 | 0.814715 | 1.34E-51 | -1.69E-46 |
| MS.gene060244 | MS.gene39037 | 0.857592 | 1.47E-62 | -1.69E-46 |
| MS.gene060259 | MS.gene39037 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene060338 | MS.gene39037 | 0.815059 | 1.12E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene39037 | 0.82199 | 3.01E-53 | -1.69E-46 |
| MS.gene060412 | MS.gene39037 | 0.806633 | 7.48E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene39037 | 0.804119 | 2.52E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene39037 | 0.843295 | 1.53E-58 | -1.69E-46 |
| MS.gene060527 | MS.gene39037 | 0.833174 | 6.21E-56 | -1.69E-46 |
| MS.gene060763 | MS.gene39037 | 0.821459 | 3.99E-53 | -1.69E-46 |
| MS.gene060785 | MS.gene39037 | 0.808869 | 2.51E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene39037 | 0.908267 | 2.06E-81 | -1.69E-46 |
| MS.gene060935 | MS.gene39037 | 0.912542 | 1.73E-83 | -1.69E-46 |
| MS.gene060937 | MS.gene39037 | 0.924007 | 1.25E-89 | -1.69E-46 |
| MS.gene061100 | MS.gene39037 | 0.842743 | 2.15E-58 | -1.69E-46 |
| MS.gene061160 | MS.gene39037 | 0.805845 | 1.10E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene39037 | 0.860873 | 1.52E-63 | -1.69E-46 |
| MS.gene061243 | MS.gene39037 | 0.846539 | 2.04E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39037.t1 | MTR_7g089800 | 99.740 | 384 | 1 | 0 | 1 | 384 | 40 | 423 | 0.0 | 781 |
| MS.gene39037.t1 | MTR_7g089800 | 99.740 | 384 | 1 | 0 | 1 | 384 | 69 | 452 | 0.0 | 781 |
| MS.gene39037.t1 | MTR_8g040120 | 81.232 | 341 | 53 | 3 | 55 | 384 | 126 | 466 | 0.0 | 543 |
| MS.gene39037.t1 | MTR_5g054900 | 59.312 | 349 | 113 | 4 | 55 | 384 | 15 | 353 | 4.68e-141 | 405 |
| MS.gene39037.t1 | MTR_5g054900 | 59.312 | 349 | 113 | 4 | 55 | 384 | 96 | 434 | 2.40e-140 | 406 |
| MS.gene39037.t1 | MTR_5g054900 | 58.739 | 349 | 111 | 5 | 55 | 384 | 15 | 349 | 2.94e-137 | 395 |
| MS.gene39037.t1 | MTR_5g054900 | 58.739 | 349 | 111 | 5 | 55 | 384 | 126 | 460 | 1.02e-135 | 395 |
| MS.gene39037.t1 | MTR_7g092750 | 58.232 | 328 | 124 | 5 | 66 | 384 | 39 | 362 | 1.89e-131 | 381 |
| MS.gene39037.t1 | MTR_7g092750 | 58.232 | 328 | 124 | 5 | 66 | 384 | 140 | 463 | 5.62e-130 | 381 |
| MS.gene39037.t1 | MTR_1g111310 | 62.739 | 314 | 101 | 4 | 76 | 384 | 405 | 707 | 1.02e-127 | 383 |
| MS.gene39037.t1 | MTR_1g111310 | 61.716 | 303 | 102 | 3 | 76 | 378 | 38 | 326 | 7.97e-115 | 350 |
| MS.gene39037.t1 | MTR_2g086420 | 61.458 | 288 | 101 | 2 | 97 | 384 | 192 | 469 | 9.05e-123 | 364 |
| MS.gene39037.t1 | MTR_2g086420 | 61.458 | 288 | 101 | 2 | 97 | 384 | 191 | 468 | 9.16e-123 | 364 |
| MS.gene39037.t1 | MTR_3g087940 | 59.000 | 300 | 110 | 3 | 90 | 384 | 70 | 361 | 5.12e-115 | 339 |
| MS.gene39037.t1 | MTR_4g053250 | 49.025 | 359 | 160 | 5 | 33 | 384 | 119 | 461 | 2.29e-111 | 334 |
| MS.gene39037.t1 | MTR_7g092750 | 52.439 | 328 | 117 | 6 | 66 | 384 | 140 | 437 | 1.84e-108 | 325 |
| MS.gene39037.t1 | MTR_0126s0080 | 60.920 | 261 | 86 | 6 | 88 | 337 | 204 | 459 | 1.18e-102 | 311 |
| MS.gene39037.t1 | MTR_8g091650 | 51.351 | 296 | 130 | 4 | 94 | 384 | 70 | 356 | 1.37e-94 | 287 |
| MS.gene39037.t1 | MTR_8g091650 | 52.083 | 288 | 124 | 4 | 102 | 384 | 5 | 283 | 1.40e-94 | 285 |
| MS.gene39037.t1 | MTR_3g073560 | 47.353 | 340 | 156 | 5 | 59 | 382 | 13 | 345 | 1.54e-94 | 295 |
| MS.gene39037.t1 | MTR_8g091650 | 51.890 | 291 | 126 | 4 | 99 | 384 | 111 | 392 | 1.94e-93 | 285 |
| MS.gene39037.t1 | MTR_5g060950 | 51.568 | 287 | 128 | 3 | 99 | 381 | 67 | 346 | 4.09e-92 | 281 |
| MS.gene39037.t1 | MTR_3g044820 | 56.566 | 198 | 68 | 4 | 65 | 251 | 18 | 208 | 4.30e-73 | 227 |
| MS.gene39037.t1 | MTR_1g111320 | 48.760 | 121 | 42 | 3 | 62 | 162 | 91 | 211 | 5.94e-24 | 99.0 |
| MS.gene39037.t1 | MTR_1g090370 | 31.674 | 221 | 121 | 5 | 162 | 377 | 33 | 228 | 2.28e-21 | 92.0 |
| MS.gene39037.t1 | MTR_8g094690 | 27.126 | 247 | 140 | 5 | 160 | 372 | 8 | 248 | 1.44e-16 | 79.3 |
| MS.gene39037.t1 | MTR_2g076140 | 22.535 | 213 | 124 | 3 | 171 | 363 | 8 | 199 | 8.73e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39037.t1 | AT3G12250 | 73.414 | 331 | 77 | 4 | 64 | 384 | 1 | 330 | 2.46e-169 | 476 |
| MS.gene39037.t1 | AT3G12250 | 73.414 | 331 | 77 | 4 | 64 | 384 | 1 | 330 | 2.46e-169 | 476 |
| MS.gene39037.t1 | AT3G12250 | 73.414 | 331 | 77 | 4 | 64 | 384 | 1 | 330 | 2.46e-169 | 476 |
| MS.gene39037.t1 | AT3G12250 | 73.414 | 331 | 77 | 4 | 64 | 384 | 1 | 330 | 2.46e-169 | 476 |
| MS.gene39037.t1 | AT5G06950 | 78.523 | 298 | 63 | 1 | 87 | 384 | 34 | 330 | 1.27e-167 | 472 |
| MS.gene39037.t1 | AT5G06950 | 78.523 | 298 | 63 | 1 | 87 | 384 | 34 | 330 | 1.27e-167 | 472 |
| MS.gene39037.t1 | AT5G06950 | 78.523 | 298 | 63 | 1 | 87 | 384 | 34 | 330 | 1.27e-167 | 472 |
| MS.gene39037.t1 | AT5G06950 | 78.523 | 298 | 63 | 1 | 87 | 384 | 34 | 330 | 1.27e-167 | 472 |
| MS.gene39037.t1 | AT5G06950 | 78.523 | 298 | 63 | 1 | 87 | 384 | 34 | 330 | 1.27e-167 | 472 |
| MS.gene39037.t1 | AT3G12250 | 77.852 | 298 | 65 | 1 | 87 | 384 | 7 | 303 | 2.09e-167 | 470 |
| MS.gene39037.t1 | AT3G12250 | 77.852 | 298 | 65 | 1 | 87 | 384 | 28 | 324 | 5.13e-167 | 470 |
| MS.gene39037.t1 | AT3G12250 | 77.852 | 298 | 65 | 1 | 87 | 384 | 59 | 355 | 7.18e-166 | 468 |
| MS.gene39037.t1 | AT5G06960 | 73.292 | 322 | 77 | 3 | 71 | 384 | 10 | 330 | 5.51e-156 | 442 |
| MS.gene39037.t1 | AT5G06960 | 73.292 | 322 | 77 | 3 | 71 | 384 | 10 | 330 | 5.51e-156 | 442 |
| MS.gene39037.t1 | AT5G06960 | 77.083 | 288 | 65 | 1 | 97 | 384 | 24 | 310 | 8.17e-156 | 441 |
| MS.gene39037.t1 | AT1G68640 | 70.103 | 291 | 84 | 2 | 96 | 384 | 163 | 452 | 6.89e-139 | 404 |
| MS.gene39037.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 61 | 384 | 13 | 329 | 3.41e-129 | 375 |
| MS.gene39037.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 61 | 384 | 13 | 329 | 3.41e-129 | 375 |
| MS.gene39037.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 61 | 384 | 137 | 453 | 1.32e-127 | 376 |
| MS.gene39037.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 61 | 384 | 137 | 453 | 1.32e-127 | 376 |
| MS.gene39037.t1 | AT1G08320 | 58.104 | 327 | 124 | 4 | 61 | 384 | 137 | 453 | 1.32e-127 | 376 |
| MS.gene39037.t1 | AT5G06839 | 56.954 | 302 | 117 | 3 | 96 | 384 | 115 | 416 | 5.24e-118 | 349 |
| MS.gene39037.t1 | AT5G06839 | 57.475 | 301 | 116 | 4 | 96 | 384 | 115 | 415 | 1.95e-117 | 347 |
| MS.gene39037.t1 | AT5G06839 | 57.475 | 301 | 116 | 4 | 96 | 384 | 158 | 458 | 3.84e-117 | 348 |
| MS.gene39037.t1 | AT5G10030 | 54.517 | 321 | 133 | 4 | 69 | 384 | 50 | 362 | 3.23e-114 | 337 |
| MS.gene39037.t1 | AT5G10030 | 54.517 | 321 | 133 | 4 | 69 | 384 | 50 | 362 | 3.23e-114 | 337 |
| MS.gene39037.t1 | AT5G10030 | 54.517 | 321 | 133 | 4 | 69 | 384 | 50 | 362 | 3.23e-114 | 337 |
| MS.gene39037.t1 | AT5G10030 | 54.517 | 321 | 133 | 4 | 69 | 384 | 50 | 362 | 3.23e-114 | 337 |
| MS.gene39037.t1 | AT5G10030 | 54.517 | 321 | 133 | 4 | 69 | 384 | 50 | 362 | 3.23e-114 | 337 |
| MS.gene39037.t1 | AT1G22070 | 56.393 | 305 | 124 | 3 | 84 | 384 | 83 | 382 | 3.77e-113 | 335 |
| MS.gene39037.t1 | AT5G65210 | 51.003 | 349 | 140 | 6 | 59 | 384 | 26 | 366 | 2.31e-110 | 328 |
| MS.gene39037.t1 | AT5G65210 | 51.003 | 349 | 140 | 6 | 59 | 384 | 26 | 366 | 2.31e-110 | 328 |
| MS.gene39037.t1 | AT5G65210 | 51.003 | 349 | 140 | 6 | 59 | 384 | 26 | 366 | 2.31e-110 | 328 |
| MS.gene39037.t1 | AT5G65210 | 51.003 | 349 | 140 | 6 | 59 | 384 | 26 | 366 | 2.31e-110 | 328 |
| MS.gene39037.t1 | AT5G65210 | 51.003 | 349 | 140 | 6 | 59 | 384 | 26 | 366 | 2.31e-110 | 328 |
| MS.gene39037.t1 | AT5G65210 | 51.003 | 349 | 140 | 6 | 59 | 384 | 26 | 366 | 2.31e-110 | 328 |
| MS.gene39037.t1 | AT5G65210 | 55.667 | 300 | 120 | 3 | 90 | 384 | 5 | 296 | 3.39e-110 | 325 |
| MS.gene39037.t1 | AT1G77920 | 49.046 | 367 | 155 | 6 | 20 | 384 | 30 | 366 | 4.58e-109 | 324 |
| MS.gene39037.t1 | AT1G58330 | 26.244 | 221 | 145 | 5 | 166 | 374 | 9 | 223 | 5.30e-15 | 73.9 |
| MS.gene39037.t1 | AT3G14880 | 24.675 | 231 | 131 | 5 | 159 | 363 | 1 | 214 | 1.39e-14 | 73.2 |
| MS.gene39037.t1 | AT3G14880 | 23.950 | 238 | 131 | 5 | 159 | 363 | 1 | 221 | 3.05e-13 | 69.3 |
Find 100 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAACTGTTGTTCAGTTAA+AGG | 0.191657 | 7.3:-19224547 | None:intergenic |
| AAAAGACGCGCTGCCAAATT+TGG | 0.207656 | 7.3:+19222789 | MS.gene39037:CDS |
| CCAGATGTTGAAGCCAAATT+TGG | 0.211263 | 7.3:-19222802 | None:intergenic |
| AGCCATTTGTCCCATGTAAT+TGG | 0.245079 | 7.3:-19224707 | None:intergenic |
| CCAAATTTGGCTTCAACATC+TGG | 0.245789 | 7.3:+19222802 | MS.gene39037:CDS |
| CCCAACCCATCAGGTGCTTC+TGG | 0.270597 | 7.3:+19224676 | MS.gene39037:CDS |
| TTAGGTGCTGATATTCAATT+TGG | 0.276431 | 7.3:+19222595 | MS.gene39037:CDS |
| AACCTCTCTGCTGCAATTGC+TGG | 0.307118 | 7.3:+19222745 | MS.gene39037:CDS |
| GCTGTAGCTCTTGCTCTAGT+TGG | 0.316242 | 7.3:-19223359 | None:intergenic |
| GCAGCTTCTTGTAAGTCATT+TGG | 0.321728 | 7.3:+19224522 | MS.gene39037:intron |
| GATGGTTAGAAGAGCATAAT+AGG | 0.327313 | 7.3:+19224140 | MS.gene39037:CDS |
| CTGGCGGCCATCGTGAGAAT+TGG | 0.336333 | 7.3:+19222821 | MS.gene39037:CDS |
| TATTGCAGCCCTTAGTTCAT+TGG | 0.346864 | 7.3:-19224167 | None:intergenic |
| TCATGTGGATTGGAGGCTTT+CGG | 0.349268 | 7.3:+19224341 | MS.gene39037:CDS |
| TGGCGGCCATCGTGAGAATT+GGG | 0.354181 | 7.3:+19222822 | MS.gene39037:CDS |
| GGAATATTTATTTCAAGTAC+TGG | 0.364580 | 7.3:+19223515 | MS.gene39037:CDS |
| GAAAAGCCGACTGAGGAAAA+AGG | 0.365804 | 7.3:+19223195 | MS.gene39037:CDS |
| TACCATTTCCACTCATTGAA+TGG | 0.377090 | 7.3:-19223547 | None:intergenic |
| TCGGTCATCTGAACTTCTTA+AGG | 0.384806 | 7.3:+19224360 | MS.gene39037:CDS |
| TTTAACTGAACAACAGTTGA+TGG | 0.387147 | 7.3:+19224549 | MS.gene39037:CDS |
| TCAATTTGGTGCTTTAAGTA+AGG | 0.395237 | 7.3:+19222609 | MS.gene39037:CDS |
| CTTTCCGAGACATTGGCTAA+TGG | 0.402534 | 7.3:+19224649 | MS.gene39037:CDS |
| CTCAAAATCGTGAAGCTGCC+AGG | 0.414559 | 7.3:+19223173 | MS.gene39037:CDS |
| AAAGCAAATAGCCAAGCTTT+AGG | 0.415265 | 7.3:+19222577 | MS.gene39037:CDS |
| TGCGAGCTCTGAGTTCTCTA+TGG | 0.421587 | 7.3:+19225260 | MS.gene39037:CDS |
| ACCCATTCAATGAGTGGAAA+TGG | 0.422756 | 7.3:+19223545 | MS.gene39037:CDS |
| GGAAAGCTTGGTACTCTTGA+GGG | 0.428090 | 7.3:+19224739 | MS.gene39037:CDS |
| CTGTAGCTCTTGCTCTAGTT+GGG | 0.432408 | 7.3:-19223358 | None:intergenic |
| GTTGCAACGTTTGCTGCCTC+AGG | 0.435590 | 7.3:-19225165 | None:intergenic |
| CTGCAATGCGTCCATTCCTT+GGG | 0.435984 | 7.3:-19224620 | None:intergenic |
| AAGAGCTCGAGCTGATTGTC+TGG | 0.439976 | 7.3:-19225209 | None:intergenic |
| CTCTATGGCTTGCACGGCCA+AGG | 0.444992 | 7.3:+19225275 | MS.gene39037:CDS |
| TTTGAAACAGTTTACTCCCT+TGG | 0.445923 | 7.3:-19225292 | None:intergenic |
| TGAAAGATCAAAAGACAAAT+CGG | 0.446752 | 7.3:+19223054 | MS.gene39037:CDS |
| TGGAAATGTGGCCAATTACA+TGG | 0.448525 | 7.3:+19224696 | MS.gene39037:CDS |
| GCTGCAATGCGTCCATTCCT+TGG | 0.454033 | 7.3:-19224621 | None:intergenic |
| ATAGGCAAACCAATGAACTA+AGG | 0.455979 | 7.3:+19224158 | MS.gene39037:CDS |
| CCAGAAGCACCTGATGGGTT+GGG | 0.456476 | 7.3:-19224676 | None:intergenic |
| ACCATTTCCACTCATTGAAT+GGG | 0.458496 | 7.3:-19223546 | None:intergenic |
| GCTACAGCGAGCACGCCAGC+AGG | 0.459908 | 7.3:+19223374 | MS.gene39037:CDS |
| AAAAGACAAATCGGATCAAA+AGG | 0.461930 | 7.3:+19223063 | MS.gene39037:CDS |
| TCCAGAAGCACCTGATGGGT+TGG | 0.465437 | 7.3:-19224677 | None:intergenic |
| CTCAATTTGAAGATATCTAC+AGG | 0.469063 | 7.3:+19224242 | MS.gene39037:CDS |
| ACCTCTCTGCTGCAATTGCT+GGG | 0.478042 | 7.3:+19222746 | MS.gene39037:CDS |
| CACATGAAACACCTCTCAGC+TGG | 0.482882 | 7.3:-19224325 | None:intergenic |
| GGGACAAATGGCTATGGCCA+TGG | 0.486901 | 7.3:+19224717 | MS.gene39037:CDS |
| GGCCAATTACATGGGACAAA+TGG | 0.487544 | 7.3:+19224705 | MS.gene39037:CDS |
| TGCAACAATTAGAGAGCAGC+AGG | 0.488377 | 7.3:+19223325 | MS.gene39037:CDS |
| AATGGTTCACCCAACCCATC+AGG | 0.491558 | 7.3:+19224667 | MS.gene39037:CDS |
| GAGAACTCAGAGCTCGCAGC+CGG | 0.499226 | 7.3:-19225255 | None:intergenic |
| CTGCAATAAATTCTCATGCT+GGG | 0.499442 | 7.3:+19224182 | MS.gene39037:CDS |
| AAACGTTGCAACAAATGCTT+CGG | 0.506047 | 7.3:+19225176 | MS.gene39037:CDS |
| GAGAGGTGTTTCATGTGGAT+TGG | 0.507638 | 7.3:+19224331 | MS.gene39037:CDS |
| TGTTCAGACGTTAAGACGGC+TGG | 0.509648 | 7.3:+19223150 | MS.gene39037:intron |
| GGTACAGTCCATTGCAAACT+CGG | 0.515997 | 7.3:+19222717 | MS.gene39037:intron |
| GCTGCAATAAATTCTCATGC+TGG | 0.516591 | 7.3:+19224181 | MS.gene39037:CDS |
| AGGTGTTTCATGTGGATTGG+AGG | 0.518347 | 7.3:+19224334 | MS.gene39037:CDS |
| GAATATCAGCACCTAAAGCT+TGG | 0.527661 | 7.3:-19222588 | None:intergenic |
| GGGAGAGTCCAACATGGCTG+AGG | 0.529600 | 7.3:+19222843 | MS.gene39037:CDS |
| GCAATCACTTTCCGAGACAT+TGG | 0.530262 | 7.3:+19224642 | MS.gene39037:CDS |
| TACAGAAGACAAGAATCAAA+TGG | 0.538000 | 7.3:+19222891 | MS.gene39037:CDS |
| CAATAAGTGATTATTTCTCC+CGG | 0.538111 | 7.3:+19225236 | MS.gene39037:CDS |
| GCTATGGCCATGGGAAAGCT+TGG | 0.544267 | 7.3:+19224727 | MS.gene39037:CDS |
| TTAACTGAACAACAGTTGAT+GGG | 0.552406 | 7.3:+19224550 | MS.gene39037:CDS |
| GGACAAATGGCTATGGCCAT+GGG | 0.556028 | 7.3:+19224718 | MS.gene39037:CDS |
| AGACGCTCTTTCCCAAGGAA+TGG | 0.556679 | 7.3:+19224609 | MS.gene39037:CDS |
| GTTTATATCCGAGTTTGCAA+TGG | 0.558175 | 7.3:-19222725 | None:intergenic |
| GGGAAAGCTTGGTACTCTTG+AGG | 0.558797 | 7.3:+19224738 | MS.gene39037:CDS |
| AGCGCTTCCCTCAGCCATGT+TGG | 0.566699 | 7.3:-19222851 | None:intergenic |
| ACATTTCCAGAAGCACCTGA+TGG | 0.566763 | 7.3:-19224682 | None:intergenic |
| GAAGATATCTACAGGCTGAA+AGG | 0.567290 | 7.3:+19224250 | MS.gene39037:CDS |
| TCCACATTCTATCAGGAATG+TGG | 0.571375 | 7.3:+19224296 | MS.gene39037:CDS |
| TCTTGAGGGATTTCTTCGCC+AGG | 0.573076 | 7.3:+19224753 | MS.gene39037:CDS |
| ATCAGGTGCTTCTGGAAATG+TGG | 0.573606 | 7.3:+19224684 | MS.gene39037:CDS |
| TCTATGGCTTGCACGGCCAA+GGG | 0.578391 | 7.3:+19225276 | MS.gene39037:CDS |
| TAGGCAAACCAATGAACTAA+GGG | 0.579382 | 7.3:+19224159 | MS.gene39037:CDS |
| CATTTCCAGAAGCACCTGAT+GGG | 0.580742 | 7.3:-19224681 | None:intergenic |
| CAGCTGAGAGGTGTTTCATG+TGG | 0.583907 | 7.3:+19224326 | MS.gene39037:CDS |
| TGCAATAAATTCTCATGCTG+GGG | 0.590748 | 7.3:+19224183 | MS.gene39037:CDS |
| TCCACATTCCTGATAGAATG+TGG | 0.593998 | 7.3:-19224297 | None:intergenic |
| TTACATGGGACAAATGGCTA+TGG | 0.598092 | 7.3:+19224711 | MS.gene39037:CDS |
| AGAACTCAGAGCTCGCAGCC+GGG | 0.599159 | 7.3:-19225254 | None:intergenic |
| TGAAATTGTCGACAATGGTA+CGG | 0.603907 | 7.3:-19224216 | None:intergenic |
| TGAGTTCTCTATGGCTTGCA+CGG | 0.606772 | 7.3:+19225269 | MS.gene39037:CDS |
| GCTGAAGACGCTCTTTCCCA+AGG | 0.608444 | 7.3:+19224604 | MS.gene39037:CDS |
| GAGCAGACCCATTCAATGAG+TGG | 0.614912 | 7.3:+19223539 | MS.gene39037:CDS |
| GGAGAGTCCAACATGGCTGA+GGG | 0.616774 | 7.3:+19222844 | MS.gene39037:CDS |
| TGAACCATTAGCCAATGTCT+CGG | 0.617863 | 7.3:-19224653 | None:intergenic |
| GGCGGCCATCGTGAGAATTG+GGG | 0.627011 | 7.3:+19222823 | MS.gene39037:CDS |
| AAGAGTACCAAGCTTTCCCA+TGG | 0.628858 | 7.3:-19224734 | None:intergenic |
| GGAAATGTGGCCAATTACAT+GGG | 0.630650 | 7.3:+19224697 | MS.gene39037:CDS |
| AATTTGGCTTCAACATCTGG+CGG | 0.636343 | 7.3:+19222805 | MS.gene39037:CDS |
| AGTCATGAAATTGTCGACAA+TGG | 0.650887 | 7.3:-19224221 | None:intergenic |
| ACCCAGCAATTGCAGCAGAG+AGG | 0.653003 | 7.3:-19222747 | None:intergenic |
| ACTCTCCCCAATTCTCACGA+TGG | 0.657176 | 7.3:-19222828 | None:intergenic |
| CTGCCAGGAAAAGCCGACTG+AGG | 0.660519 | 7.3:+19223188 | MS.gene39037:CDS |
| GTTTATAGGCTGATAACCTG+AGG | 0.665954 | 7.3:+19225149 | MS.gene39037:intron |
| TGTGGAAGACTCCAGCTGAG+AGG | 0.690086 | 7.3:+19224314 | MS.gene39037:CDS |
| GAATTGGGGAGAGTCCAACA+TGG | 0.702168 | 7.3:+19222837 | MS.gene39037:CDS |
| TTGATGCAGAATACGCACGA+TGG | 0.731911 | 7.3:+19224122 | MS.gene39037:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACAATTTAACAGAAAA+AGG | - | chr7.3:19223226-19223245 | None:intergenic | 15.0% |
| !!! | TTGATTATTTATCTTTTCTA+GGG | + | chr7.3:19223494-19223513 | MS.gene39037:intron | 15.0% |
| !!! | TTGCAATTTATTGATTTTAT+TGG | - | chr7.3:19222647-19222666 | None:intergenic | 15.0% |
| !!! | TTTGATTATTTATCTTTTCT+AGG | + | chr7.3:19223493-19223512 | MS.gene39037:intron | 15.0% |
| !! | AAATATCTGTATATGTTAAG+AGG | - | chr7.3:19223815-19223834 | None:intergenic | 20.0% |
| !! | ATGAAAAAAGAAACATATCA+CGG | - | chr7.3:19223758-19223777 | None:intergenic | 20.0% |
| !! | ATTGCTTTACTTTAATCATA+CGG | + | chr7.3:19222916-19222935 | MS.gene39037:intron | 20.0% |
| !! | CAAAAGCAAAATTTAACATA+TGG | - | chr7.3:19223132-19223151 | None:intergenic | 20.0% |
| !! | TATACTCTTTATCACTTTAT+TGG | - | chr7.3:19224967-19224986 | None:intergenic | 20.0% |
| !!! | AAGAGGTTTGATATTTTTAA+AGG | - | chr7.3:19223798-19223817 | None:intergenic | 20.0% |
| !!! | GATATTTTTAAAGGAAATGT+TGG | - | chr7.3:19223789-19223808 | None:intergenic | 20.0% |
| !!! | TGTTAGAACTTATTTTTAGT+CGG | + | chr7.3:19223853-19223872 | MS.gene39037:intron | 20.0% |
| ! | AAAGGAAAACAAAAGTGAAT+TGG | - | chr7.3:19225121-19225140 | None:intergenic | 25.0% |
| ! | AATTAATTGTGTACCTTAGA+GGG | + | chr7.3:19224991-19225010 | MS.gene39037:intron | 25.0% |
| ! | TGAAAGATCAAAAGACAAAT+CGG | + | chr7.3:19223054-19223073 | MS.gene39037:CDS | 25.0% |
| !! | GGAATATTTATTTCAAGTAC+TGG | + | chr7.3:19223515-19223534 | MS.gene39037:CDS | 25.0% |
| !! | TAACATTGAATTTAAAGCTG+TGG | + | chr7.3:19223675-19223694 | MS.gene39037:intron | 25.0% |
| !!! | AATGAAGATGGCTATTTTAT+TGG | - | chr7.3:19223002-19223021 | None:intergenic | 25.0% |
| !!! | GATTAAGTGTTGGATTTTTA+AGG | + | chr7.3:19224445-19224464 | MS.gene39037:intron | 25.0% |
| AAAAATTCCTCCAAGTAGAA+GGG | - | chr7.3:19223636-19223655 | None:intergenic | 30.0% | |
| AAAAGACAAATCGGATCAAA+AGG | + | chr7.3:19223063-19223082 | MS.gene39037:CDS | 30.0% | |
| ATCAACTGTTGTTCAGTTAA+AGG | - | chr7.3:19224550-19224569 | None:intergenic | 30.0% | |
| ATGCAAAATCCATTAACTCT+TGG | + | chr7.3:19223707-19223726 | MS.gene39037:intron | 30.0% | |
| ATTCTTCTTTCCATTCATTC+AGG | + | chr7.3:19223296-19223315 | MS.gene39037:intron | 30.0% | |
| CAAAAACGTCAACACAATTT+AGG | - | chr7.3:19224082-19224101 | None:intergenic | 30.0% | |
| CCATAGAGAATAAACAAATG+AGG | - | chr7.3:19224395-19224414 | None:intergenic | 30.0% | |
| CCTCATTTGTTTATTCTCTA+TGG | + | chr7.3:19224392-19224411 | MS.gene39037:intron | 30.0% | |
| CTCAATTTGAAGATATCTAC+AGG | + | chr7.3:19224242-19224261 | MS.gene39037:CDS | 30.0% | |
| CTGCAAAACAAAAATGAAGA+TGG | - | chr7.3:19223014-19223033 | None:intergenic | 30.0% | |
| GAAATAGACAGTTAATTACC+TGG | - | chr7.3:19224774-19224793 | None:intergenic | 30.0% | |
| GAATTAATTGTGTACCTTAG+AGG | + | chr7.3:19224990-19225009 | MS.gene39037:intron | 30.0% | |
| GATAACGATTGATTAAGTGT+TGG | + | chr7.3:19224435-19224454 | MS.gene39037:intron | 30.0% | |
| GTCTTTAATCACACATATGA+TGG | - | chr7.3:19223947-19223966 | None:intergenic | 30.0% | |
| GTTATTGAATGAAACTGTGT+CGG | - | chr7.3:19224860-19224879 | None:intergenic | 30.0% | |
| TACAGAAGACAAGAATCAAA+TGG | + | chr7.3:19222891-19222910 | MS.gene39037:CDS | 30.0% | |
| TTAACTGAACAACAGTTGAT+GGG | + | chr7.3:19224550-19224569 | MS.gene39037:CDS | 30.0% | |
| TTATCAGCCTATAAACATGA+AGG | - | chr7.3:19225145-19225164 | None:intergenic | 30.0% | |
| TTTAACTGAACAACAGTTGA+TGG | + | chr7.3:19224549-19224568 | MS.gene39037:CDS | 30.0% | |
| ! | CAATAAGTGATTATTTCTCC+CGG | + | chr7.3:19225236-19225255 | MS.gene39037:CDS | 30.0% |
| ! | GTTATTCGTACATCTAAAAC+TGG | + | chr7.3:19224487-19224506 | MS.gene39037:intron | 30.0% |
| ! | TATCTCAACTTCCTTCTTTT+TGG | + | chr7.3:19224796-19224815 | MS.gene39037:intron | 30.0% |
| ! | TCCTTTTCCTTCATGTTTAT+AGG | + | chr7.3:19225135-19225154 | MS.gene39037:intron | 30.0% |
| ! | TTCTACTTGGAGGAATTTTT+CGG | + | chr7.3:19223636-19223655 | MS.gene39037:intron | 30.0% |
| ! | TTTGTCTTTTGATCTTTCAC+TGG | - | chr7.3:19223053-19223072 | None:intergenic | 30.0% |
| !! | CTAAATTGTGTTGACGTTTT+TGG | + | chr7.3:19224080-19224099 | MS.gene39037:intron | 30.0% |
| !! | TCAATTTGGTGCTTTAAGTA+AGG | + | chr7.3:19222609-19222628 | MS.gene39037:CDS | 30.0% |
| !! | TCTTTGTTGCTATTTCATTC+TGG | + | chr7.3:19223446-19223465 | MS.gene39037:intron | 30.0% |
| !! | TTAGGTGCTGATATTCAATT+TGG | + | chr7.3:19222595-19222614 | MS.gene39037:CDS | 30.0% |
| !!! | AGAGTTAATGGATTTTGCAT+TGG | - | chr7.3:19223707-19223726 | None:intergenic | 30.0% |
| AAACGTTGCAACAAATGCTT+CGG | + | chr7.3:19225176-19225195 | MS.gene39037:CDS | 35.0% | |
| AAAGCAAATAGCCAAGCTTT+AGG | + | chr7.3:19222577-19222596 | MS.gene39037:CDS | 35.0% | |
| AAATAGCAAAACAAACCTGC+TGG | - | chr7.3:19223392-19223411 | None:intergenic | 35.0% | |
| ACCATTTCCACTCATTGAAT+GGG | - | chr7.3:19223549-19223568 | None:intergenic | 35.0% | |
| AGTCATGAAATTGTCGACAA+TGG | - | chr7.3:19224224-19224243 | None:intergenic | 35.0% | |
| ATAGGCAAACCAATGAACTA+AGG | + | chr7.3:19224158-19224177 | MS.gene39037:CDS | 35.0% | |
| CATACGGTTTATTCTGAATC+TGG | + | chr7.3:19222932-19222951 | MS.gene39037:intron | 35.0% | |
| CTGCAATAAATTCTCATGCT+GGG | + | chr7.3:19224182-19224201 | MS.gene39037:CDS | 35.0% | |
| GAAAAATTCCTCCAAGTAGA+AGG | - | chr7.3:19223637-19223656 | None:intergenic | 35.0% | |
| GAAAATAGTAGTCTGTAGCA+TGG | + | chr7.3:19224016-19224035 | MS.gene39037:intron | 35.0% | |
| GCCTATAAACATGAAGGAAA+AGG | - | chr7.3:19225139-19225158 | None:intergenic | 35.0% | |
| GTTTATATCCGAGTTTGCAA+TGG | - | chr7.3:19222728-19222747 | None:intergenic | 35.0% | |
| TACCATTTCCACTCATTGAA+TGG | - | chr7.3:19223550-19223569 | None:intergenic | 35.0% | |
| TAGGCAAACCAATGAACTAA+GGG | + | chr7.3:19224159-19224178 | MS.gene39037:CDS | 35.0% | |
| TCTTCACTTGCATGTATGTA+CGG | + | chr7.3:19222696-19222715 | MS.gene39037:intron | 35.0% | |
| TGAAATTGTCGACAATGGTA+CGG | - | chr7.3:19224219-19224238 | None:intergenic | 35.0% | |
| TGCAATAAATTCTCATGCTG+GGG | + | chr7.3:19224183-19224202 | MS.gene39037:CDS | 35.0% | |
| TTTGTCAAGCCAAGAGTTAA+TGG | - | chr7.3:19223719-19223738 | None:intergenic | 35.0% | |
| ! | CTTTTGTTCAGACGTTAAGA+CGG | + | chr7.3:19223146-19223165 | MS.gene39037:intron | 35.0% |
| ! | GATGGTTAGAAGAGCATAAT+AGG | + | chr7.3:19224140-19224159 | MS.gene39037:CDS | 35.0% |
| ! | GATGTTTTCCACATTCTATC+AGG | + | chr7.3:19224289-19224308 | MS.gene39037:CDS | 35.0% |
| !!! | TTTTGTTTTGCAGCCTGAAA+GGG | + | chr7.3:19223021-19223040 | MS.gene39037:intron | 35.0% |
| !!! | TTTTTGTTTTGCAGCCTGAA+AGG | + | chr7.3:19223020-19223039 | MS.gene39037:intron | 35.0% |
| ACATATCACGGCAAATGTCA+TGG | - | chr7.3:19223746-19223765 | None:intergenic | 40.0% | |
| ACCCATTCAATGAGTGGAAA+TGG | + | chr7.3:19223545-19223564 | MS.gene39037:CDS | 40.0% | |
| AGCCATTTGTCCCATGTAAT+TGG | - | chr7.3:19224710-19224729 | None:intergenic | 40.0% | |
| ATAGTAGTCTGTAGCATGGA+TGG | + | chr7.3:19224020-19224039 | MS.gene39037:intron | 40.0% | |
| CCAGATGTTGAAGCCAAATT+TGG | - | chr7.3:19222805-19222824 | None:intergenic | 40.0% | |
| GAAGATATCTACAGGCTGAA+AGG | + | chr7.3:19224250-19224269 | MS.gene39037:CDS | 40.0% | |
| GAATATCAGCACCTAAAGCT+TGG | - | chr7.3:19222591-19222610 | None:intergenic | 40.0% | |
| GCAGCTTCTTGTAAGTCATT+TGG | + | chr7.3:19224522-19224541 | MS.gene39037:intron | 40.0% | |
| GCTGCAATAAATTCTCATGC+TGG | + | chr7.3:19224181-19224200 | MS.gene39037:CDS | 40.0% | |
| GGAAATGTGGCCAATTACAT+GGG | + | chr7.3:19224697-19224716 | MS.gene39037:CDS | 40.0% | |
| GGATACACGGTATACAACAA+CGG | - | chr7.3:19224890-19224909 | None:intergenic | 40.0% | |
| GTTTATAGGCTGATAACCTG+AGG | + | chr7.3:19225149-19225168 | MS.gene39037:intron | 40.0% | |
| TACAGACACAAACACGACAA+CGG | - | chr7.3:19224916-19224935 | None:intergenic | 40.0% | |
| TATTGCAGCCCTTAGTTCAT+TGG | - | chr7.3:19224170-19224189 | None:intergenic | 40.0% | |
| TCCACATTCCTGATAGAATG+TGG | - | chr7.3:19224300-19224319 | None:intergenic | 40.0% | |
| TCCACATTCTATCAGGAATG+TGG | + | chr7.3:19224296-19224315 | MS.gene39037:CDS | 40.0% | |
| TCGGTCATCTGAACTTCTTA+AGG | + | chr7.3:19224360-19224379 | MS.gene39037:CDS | 40.0% | |
| TGAACCATTAGCCAATGTCT+CGG | - | chr7.3:19224656-19224675 | None:intergenic | 40.0% | |
| TGCACATATGCCTGAATGAA+TGG | - | chr7.3:19223309-19223328 | None:intergenic | 40.0% | |
| TGGAAATGTGGCCAATTACA+TGG | + | chr7.3:19224696-19224715 | MS.gene39037:CDS | 40.0% | |
| TGTTTCTTCTGCATGCAATC+TGG | + | chr7.3:19223258-19223277 | MS.gene39037:intron | 40.0% | |
| TTACATGGGACAAATGGCTA+TGG | + | chr7.3:19224711-19224730 | MS.gene39037:CDS | 40.0% | |
| ! | AATTTGGCTTCAACATCTGG+CGG | + | chr7.3:19222805-19222824 | MS.gene39037:CDS | 40.0% |
| ! | ACATGCAAGTGAAGAGTGTA+AGG | - | chr7.3:19222691-19222710 | None:intergenic | 40.0% |
| ! | CCAAATTTGGCTTCAACATC+TGG | + | chr7.3:19222802-19222821 | MS.gene39037:CDS | 40.0% |
| ! | CTCAACTTCCTTCTTTTTGG+AGG | + | chr7.3:19224799-19224818 | MS.gene39037:intron | 40.0% |
| !!! | TTTGTTTTGCAGCCTGAAAG+GGG | + | chr7.3:19223022-19223041 | MS.gene39037:intron | 40.0% |
| AAAAGACGCGCTGCCAAATT+TGG | + | chr7.3:19222789-19222808 | MS.gene39037:CDS | 45.0% | |
| ACACAAACACGACAACGGAA+TGG | - | chr7.3:19224911-19224930 | None:intergenic | 45.0% | |
| ACGACAACGGAATGGATACA+CGG | - | chr7.3:19224903-19224922 | None:intergenic | 45.0% | |
| CTGTAGCTCTTGCTCTAGTT+GGG | - | chr7.3:19223361-19223380 | None:intergenic | 45.0% | |
| GAAAAGCCGACTGAGGAAAA+AGG | + | chr7.3:19223195-19223214 | MS.gene39037:CDS | 45.0% | |
| GCAATCACTTTCCGAGACAT+TGG | + | chr7.3:19224642-19224661 | MS.gene39037:CDS | 45.0% | |
| GCATCAAAGTCCCTTCTACT+TGG | + | chr7.3:19223623-19223642 | MS.gene39037:intron | 45.0% | |
| GGAAAGCTTGGTACTCTTGA+GGG | + | chr7.3:19224739-19224758 | MS.gene39037:CDS | 45.0% | |
| GGCCAATTACATGGGACAAA+TGG | + | chr7.3:19224705-19224724 | MS.gene39037:CDS | 45.0% | |
| GGTACAGTCCATTGCAAACT+CGG | + | chr7.3:19222717-19222736 | MS.gene39037:intron | 45.0% | |
| GTAATGCATCTCACCCTCTA+AGG | - | chr7.3:19225007-19225026 | None:intergenic | 45.0% | |
| TCAAAGTCCCTTCTACTTGG+AGG | + | chr7.3:19223626-19223645 | MS.gene39037:intron | 45.0% | |
| TCAAGCTTGCGTCACACAAT+TGG | - | chr7.3:19223591-19223610 | None:intergenic | 45.0% | |
| TGCAACAATTAGAGAGCAGC+AGG | + | chr7.3:19223325-19223344 | MS.gene39037:CDS | 45.0% | |
| TTGATGCAGAATACGCACGA+TGG | + | chr7.3:19224122-19224141 | MS.gene39037:CDS | 45.0% | |
| ! | ATCAGGTGCTTCTGGAAATG+TGG | + | chr7.3:19224684-19224703 | MS.gene39037:CDS | 45.0% |
| ! | CTTTCCGAGACATTGGCTAA+TGG | + | chr7.3:19224649-19224668 | MS.gene39037:CDS | 45.0% |
| ! | GCTGTACCTTTTTCCTCAGT+CGG | - | chr7.3:19223204-19223223 | None:intergenic | 45.0% |
| ! | TGAGTTCTCTATGGCTTGCA+CGG | + | chr7.3:19225269-19225288 | MS.gene39037:CDS | 45.0% |
| !! | AAGAGTACCAAGCTTTCCCA+TGG | - | chr7.3:19224737-19224756 | None:intergenic | 45.0% |
| !! | ACATTTCCAGAAGCACCTGA+TGG | - | chr7.3:19224685-19224704 | None:intergenic | 45.0% |
| !! | AGGTGTTTCATGTGGATTGG+AGG | + | chr7.3:19224334-19224353 | MS.gene39037:CDS | 45.0% |
| !! | CATTTCCAGAAGCACCTGAT+GGG | - | chr7.3:19224684-19224703 | None:intergenic | 45.0% |
| !! | GAGAGGTGTTTCATGTGGAT+TGG | + | chr7.3:19224331-19224350 | MS.gene39037:CDS | 45.0% |
| !! | TCATGTGGATTGGAGGCTTT+CGG | + | chr7.3:19224341-19224360 | MS.gene39037:CDS | 45.0% |
| !! | TTGTTTTGCAGCCTGAAAGG+GGG | + | chr7.3:19223023-19223042 | MS.gene39037:intron | 45.0% |
| !! | TTTTTGGTGTGCAGGTGCAA+TGG | + | chr7.3:19224096-19224115 | MS.gene39037:intron | 45.0% |
| !!! | TGTTGACGTTTTTGGTGTGC+AGG | + | chr7.3:19224088-19224107 | MS.gene39037:intron | 45.0% |
| AACCTCTCTGCTGCAATTGC+TGG | + | chr7.3:19222745-19222764 | MS.gene39037:CDS | 50.0% | |
| AAGAGCTCGAGCTGATTGTC+TGG | - | chr7.3:19225212-19225231 | None:intergenic | 50.0% | |
| AATGGTTCACCCAACCCATC+AGG | + | chr7.3:19224667-19224686 | MS.gene39037:CDS | 50.0% | |
| ACCTCTCTGCTGCAATTGCT+GGG | + | chr7.3:19222746-19222765 | MS.gene39037:CDS | 50.0% | |
| ACTCTCCCCAATTCTCACGA+TGG | - | chr7.3:19222831-19222850 | None:intergenic | 50.0% | |
| AGACGCTCTTTCCCAAGGAA+TGG | + | chr7.3:19224609-19224628 | MS.gene39037:CDS | 50.0% | |
| AGCTTGCGTCACACAATTGG+AGG | - | chr7.3:19223588-19223607 | None:intergenic | 50.0% | |
| CACATGAAACACCTCTCAGC+TGG | - | chr7.3:19224328-19224347 | None:intergenic | 50.0% | |
| CACTCACACATGTCGAACAC+CGG | - | chr7.3:19224830-19224849 | None:intergenic | 50.0% | |
| CTCAAAATCGTGAAGCTGCC+AGG | + | chr7.3:19223173-19223192 | MS.gene39037:CDS | 50.0% | |
| CTGCAATGCGTCCATTCCTT+GGG | - | chr7.3:19224623-19224642 | None:intergenic | 50.0% | |
| GAATTGGGGAGAGTCCAACA+TGG | + | chr7.3:19222837-19222856 | MS.gene39037:CDS | 50.0% | |
| GAGCAGACCCATTCAATGAG+TGG | + | chr7.3:19223539-19223558 | MS.gene39037:CDS | 50.0% | |
| GCTGTAGCTCTTGCTCTAGT+TGG | - | chr7.3:19223362-19223381 | None:intergenic | 50.0% | |
| GGACAAATGGCTATGGCCAT+GGG | + | chr7.3:19224718-19224737 | MS.gene39037:CDS | 50.0% | |
| GGGAAAGCTTGGTACTCTTG+AGG | + | chr7.3:19224738-19224757 | MS.gene39037:CDS | 50.0% | |
| TCTTGAGGGATTTCTTCGCC+AGG | + | chr7.3:19224753-19224772 | MS.gene39037:CDS | 50.0% | |
| TGTTCAGACGTTAAGACGGC+TGG | + | chr7.3:19223150-19223169 | MS.gene39037:intron | 50.0% | |
| ! | TGTTTTGCAGCCTGAAAGGG+GGG | + | chr7.3:19223024-19223043 | MS.gene39037:intron | 50.0% |
| !! | CAGCTGAGAGGTGTTTCATG+TGG | + | chr7.3:19224326-19224345 | MS.gene39037:CDS | 50.0% |
| !! | CTTCTTTTTGGAGGCGTGTC+CGG | + | chr7.3:19224808-19224827 | MS.gene39037:intron | 50.0% |
| !! | TGCGAGCTCTGAGTTCTCTA+TGG | + | chr7.3:19225260-19225279 | MS.gene39037:CDS | 50.0% |
| !! | TTTCCTCAGTCGGCTTTTCC+TGG | - | chr7.3:19223194-19223213 | None:intergenic | 50.0% |
| ACCCAGCAATTGCAGCAGAG+AGG | - | chr7.3:19222750-19222769 | None:intergenic | 55.0% | |
| CGGACACGCCTCCAAAAAGA+AGG | - | chr7.3:19224810-19224829 | None:intergenic | 55.0% | |
| GCTATGGCCATGGGAAAGCT+TGG | + | chr7.3:19224727-19224746 | MS.gene39037:CDS | 55.0% | |
| GCTGAAGACGCTCTTTCCCA+AGG | + | chr7.3:19224604-19224623 | MS.gene39037:CDS | 55.0% | |
| GCTGCAATGCGTCCATTCCT+TGG | - | chr7.3:19224624-19224643 | None:intergenic | 55.0% | |
| GGAGAGTCCAACATGGCTGA+GGG | + | chr7.3:19222844-19222863 | MS.gene39037:CDS | 55.0% | |
| GGGACAAATGGCTATGGCCA+TGG | + | chr7.3:19224717-19224736 | MS.gene39037:CDS | 55.0% | |
| TCACTGGATTCCCCCCTTTC+AGG | - | chr7.3:19223037-19223056 | None:intergenic | 55.0% | |
| TGGCGGCCATCGTGAGAATT+GGG | + | chr7.3:19222822-19222841 | MS.gene39037:CDS | 55.0% | |
| TGTGGAAGACTCCAGCTGAG+AGG | + | chr7.3:19224314-19224333 | MS.gene39037:CDS | 55.0% | |
| ! | GTTGCAACGTTTGCTGCCTC+AGG | - | chr7.3:19225168-19225187 | None:intergenic | 55.0% |
| ! | TCTATGGCTTGCACGGCCAA+GGG | + | chr7.3:19225276-19225295 | MS.gene39037:CDS | 55.0% |
| !! | CCAGAAGCACCTGATGGGTT+GGG | - | chr7.3:19224679-19224698 | None:intergenic | 55.0% |
| !! | TCCAGAAGCACCTGATGGGT+TGG | - | chr7.3:19224680-19224699 | None:intergenic | 55.0% |
| AGAACTCAGAGCTCGCAGCC+GGG | - | chr7.3:19225257-19225276 | None:intergenic | 60.0% | |
| AGCGCTTCCCTCAGCCATGT+TGG | - | chr7.3:19222854-19222873 | None:intergenic | 60.0% | |
| CCCAACCCATCAGGTGCTTC+TGG | + | chr7.3:19224676-19224695 | MS.gene39037:CDS | 60.0% | |
| CTGCCAGGAAAAGCCGACTG+AGG | + | chr7.3:19223188-19223207 | MS.gene39037:CDS | 60.0% | |
| CTGGCGGCCATCGTGAGAAT+TGG | + | chr7.3:19222821-19222840 | MS.gene39037:CDS | 60.0% | |
| GAGAACTCAGAGCTCGCAGC+CGG | - | chr7.3:19225258-19225277 | None:intergenic | 60.0% | |
| GGCGGCCATCGTGAGAATTG+GGG | + | chr7.3:19222823-19222842 | MS.gene39037:CDS | 60.0% | |
| GGGAGAGTCCAACATGGCTG+AGG | + | chr7.3:19222843-19222862 | MS.gene39037:CDS | 60.0% | |
| ! | CTCTATGGCTTGCACGGCCA+AGG | + | chr7.3:19225275-19225294 | MS.gene39037:CDS | 60.0% |
| GCTACAGCGAGCACGCCAGC+AGG | + | chr7.3:19223374-19223393 | MS.gene39037:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 19222574 | 19225303 | 19222574 | ID=MS.gene39037 |
| chr7.3 | mRNA | 19222574 | 19225303 | 19222574 | ID=MS.gene39037.t1;Parent=MS.gene39037 |
| chr7.3 | exon | 19222574 | 19222630 | 19222574 | ID=MS.gene39037.t1.exon1;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19222574 | 19222630 | 19222574 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| chr7.3 | exon | 19222724 | 19222912 | 19222724 | ID=MS.gene39037.t1.exon2;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19222724 | 19222912 | 19222724 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| chr7.3 | exon | 19223034 | 19223084 | 19223034 | ID=MS.gene39037.t1.exon3;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19223034 | 19223084 | 19223034 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| chr7.3 | exon | 19223157 | 19223216 | 19223157 | ID=MS.gene39037.t1.exon4;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19223157 | 19223216 | 19223157 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| chr7.3 | exon | 19223318 | 19223395 | 19223318 | ID=MS.gene39037.t1.exon5;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19223318 | 19223395 | 19223318 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| chr7.3 | exon | 19223515 | 19223566 | 19223515 | ID=MS.gene39037.t1.exon6;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19223515 | 19223566 | 19223515 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| chr7.3 | exon | 19224110 | 19224381 | 19224110 | ID=MS.gene39037.t1.exon7;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19224110 | 19224381 | 19224110 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| chr7.3 | exon | 19224526 | 19224774 | 19224526 | ID=MS.gene39037.t1.exon8;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19224526 | 19224774 | 19224526 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| chr7.3 | exon | 19225157 | 19225303 | 19225157 | ID=MS.gene39037.t1.exon9;Parent=MS.gene39037.t1 |
| chr7.3 | CDS | 19225157 | 19225303 | 19225157 | ID=cds.MS.gene39037.t1;Parent=MS.gene39037.t1 |
| Gene Sequence |
| Protein sequence |
