Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene68390 | 0.80237 | 5.80E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene68390 | 0.800194 | 1.62E-48 | -1.69E-46 |
| MS.gene049825 | MS.gene68390 | 0.814136 | 1.80E-51 | -1.69E-46 |
| MS.gene049873 | MS.gene68390 | 0.840628 | 7.75E-58 | -1.69E-46 |
| MS.gene050156 | MS.gene68390 | 0.802616 | 5.16E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene68390 | 0.808745 | 2.66E-50 | -1.69E-46 |
| MS.gene050799 | MS.gene68390 | 0.865476 | 5.74E-65 | -1.69E-46 |
| MS.gene050844 | MS.gene68390 | 0.814389 | 1.58E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene68390 | 0.81056 | 1.08E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene68390 | 0.809717 | 1.65E-50 | -1.69E-46 |
| MS.gene051957 | MS.gene68390 | 0.812718 | 3.68E-51 | -1.69E-46 |
| MS.gene052358 | MS.gene68390 | -0.810858 | 9.35E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene68390 | 0.859421 | 4.19E-63 | -1.69E-46 |
| MS.gene052584 | MS.gene68390 | 0.803709 | 3.06E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene68390 | 0.810355 | 1.20E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene68390 | 0.81477 | 1.30E-51 | -1.69E-46 |
| MS.gene053145 | MS.gene68390 | 0.862542 | 4.71E-64 | -1.69E-46 |
| MS.gene053226 | MS.gene68390 | 0.813662 | 2.29E-51 | -1.69E-46 |
| MS.gene05365 | MS.gene68390 | 0.81899 | 1.47E-52 | -1.69E-46 |
| MS.gene053883 | MS.gene68390 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene053900 | MS.gene68390 | 0.932053 | 1.51E-94 | -1.69E-46 |
| MS.gene053967 | MS.gene68390 | 0.827421 | 1.58E-54 | -1.69E-46 |
| MS.gene055374 | MS.gene68390 | 0.833949 | 3.97E-56 | -1.69E-46 |
| MS.gene055586 | MS.gene68390 | 0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene68390 | 0.81174 | 6.02E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene68390 | 0.837051 | 6.53E-57 | -1.69E-46 |
| MS.gene056170 | MS.gene68390 | 0.8052 | 1.50E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene68390 | 0.816289 | 5.97E-52 | -1.69E-46 |
| MS.gene056373 | MS.gene68390 | 0.807827 | 4.18E-50 | -1.69E-46 |
| MS.gene056642 | MS.gene68390 | 0.815517 | 8.88E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene68390 | 0.815384 | 9.51E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene68390 | 0.850957 | 1.21E-60 | -1.69E-46 |
| MS.gene058625 | MS.gene68390 | 0.824725 | 6.91E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene68390 | 0.805681 | 1.19E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene68390 | 0.81711 | 3.91E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene68390 | 0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene68390 | 0.814171 | 1.76E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene68390 | 0.802922 | 4.46E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene68390 | 0.835006 | 2.16E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 16 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACCTATTATTTCCGTAAA+TGG | 0.175758 | 1.3:+27146535 | MS.gene68390:CDS |
| GCTCCATTTACGGAAATAAT+AGG | 0.342954 | 1.3:-27146538 | None:intergenic |
| CATCAAAAGCTCTTTGAACT+TGG | 0.355339 | 1.3:+27148027 | MS.gene68390:CDS |
| CATTAGCTCTTTCTCATCAA+TGG | 0.358749 | 1.3:-27145672 | None:intergenic |
| AGGAAGAGATGCTCCATTTA+CGG | 0.360970 | 1.3:-27146548 | None:intergenic |
| ATGGAGCATCTCTTCCTGTT+TGG | 0.386995 | 1.3:+27146554 | MS.gene68390:CDS |
| CATTGATGAGAAAGAGCTAA+TGG | 0.423043 | 1.3:+27145673 | MS.gene68390:CDS |
| ATGGAGAAGTTTATCAATGA+AGG | 0.453704 | 1.3:+27145692 | MS.gene68390:CDS |
| TATGATTACCTTGATTATGT+AGG | 0.491010 | 1.3:-27146586 | None:intergenic |
| GTAGGAGTTGATCTCCAAAC+AGG | 0.497937 | 1.3:-27146568 | None:intergenic |
| ATCAAAAGCTCTTTGAACTT+GGG | 0.501854 | 1.3:+27148028 | MS.gene68390:CDS |
| AGAATGACAAGGAGAGAAGA+TGG | 0.502575 | 1.3:+27146513 | MS.gene68390:CDS |
| GATCAACTCCTACATAATCA+AGG | 0.538359 | 1.3:+27146578 | MS.gene68390:CDS |
| TTTCTTTGCTGATTATACTG+AGG | 0.608431 | 1.3:+27148002 | MS.gene68390:CDS |
| CAATATAGGAGGTCGTGTCA+AGG | 0.639850 | 1.3:+27146485 | MS.gene68390:intron |
| TCAAGGAGAGAAGAATGACA+AGG | 0.695837 | 1.3:+27146502 | MS.gene68390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACTTCTATAATTAAAA+TGG | - | chr1.3:27145729-27145748 | None:intergenic | 10.0% |
| !!! | ATTTTAATTATAGAAGTTAT+AGG | + | chr1.3:27145728-27145747 | MS.gene68390:intron | 10.0% |
| !!! | TATAGATAATATTTCTAATT+AGG | + | chr1.3:27145972-27145991 | MS.gene68390:intron | 10.0% |
| !! | ATTCAATAAAATTGAACAAA+AGG | - | chr1.3:27146636-27146655 | None:intergenic | 15.0% |
| !!! | AACTTTTGTAAGATTTTAAT+GGG | + | chr1.3:27148191-27148210 | MS.gene68390:intron | 15.0% |
| !!! | AGTTCAAAATTTATTTTGAA+AGG | - | chr1.3:27146814-27146833 | None:intergenic | 15.0% |
| !!! | ATTTTAGTTCAAAAATATGT+AGG | + | chr1.3:27147501-27147520 | MS.gene68390:intron | 15.0% |
| !!! | CTTATTTTGTCTAAAAAATA+TGG | + | chr1.3:27147360-27147379 | MS.gene68390:intron | 15.0% |
| !!! | TTTTAGTTCAAAAATATGTA+GGG | + | chr1.3:27147502-27147521 | MS.gene68390:intron | 15.0% |
| !! | AAAATAAACAGTAGATTGAT+TGG | - | chr1.3:27145820-27145839 | None:intergenic | 20.0% |
| !! | AAGAAATTATCATGTTAATC+TGG | - | chr1.3:27148223-27148242 | None:intergenic | 20.0% |
| !! | AAGATATTATCATACAAAGT+TGG | - | chr1.3:27148159-27148178 | None:intergenic | 20.0% |
| !! | ACAAATATTAAAAATTTGCG+AGG | + | chr1.3:27147669-27147688 | MS.gene68390:intron | 20.0% |
| !! | ACATGATTTCATCAATTAAA+AGG | - | chr1.3:27146046-27146065 | None:intergenic | 20.0% |
| !! | ATTACTTCTATCAAATTATC+TGG | + | chr1.3:27147256-27147275 | MS.gene68390:intron | 20.0% |
| !! | CAGAAATTAAAATTTACAGT+TGG | - | chr1.3:27148355-27148374 | None:intergenic | 20.0% |
| !! | CTCTAATAAAAAGGTTAAAT+TGG | + | chr1.3:27147642-27147661 | MS.gene68390:intron | 20.0% |
| !! | GAAAATTGATGTAACAATAT+AGG | + | chr1.3:27146471-27146490 | MS.gene68390:intron | 20.0% |
| !! | GTAAAAATAATAGAATGAAG+TGG | + | chr1.3:27148505-27148524 | MS.gene68390:intron | 20.0% |
| !! | GTAGTAAGAATAATGTAATT+TGG | + | chr1.3:27145903-27145922 | MS.gene68390:intron | 20.0% |
| !! | TATCATTATGAAGTATGAAA+CGG | - | chr1.3:27147091-27147110 | None:intergenic | 20.0% |
| !! | TATTTAACCAACCAATATTA+CGG | - | chr1.3:27147604-27147623 | None:intergenic | 20.0% |
| !!! | AAACAGTAAGATTTTGAAAT+TGG | + | chr1.3:27147529-27147548 | MS.gene68390:intron | 20.0% |
| !!! | AACAGTAAGATTTTGAAATT+GGG | + | chr1.3:27147530-27147549 | MS.gene68390:intron | 20.0% |
| !!! | ATTTCAAAATCTTACTGTTT+TGG | - | chr1.3:27147529-27147548 | None:intergenic | 20.0% |
| !!! | CAACTGTAAATTTTAATTTC+TGG | + | chr1.3:27148353-27148372 | MS.gene68390:intron | 20.0% |
| !!! | CAACTTTTGTAAGATTTTAA+TGG | + | chr1.3:27148190-27148209 | MS.gene68390:intron | 20.0% |
| !!! | CAATTATAACCTATTAGTTT+TGG | - | chr1.3:27147576-27147595 | None:intergenic | 20.0% |
| !!! | TATTATTTTTACATATGCCA+AGG | - | chr1.3:27148497-27148516 | None:intergenic | 20.0% |
| !!! | TTCAAGATTTAAAGTTTCTA+GGG | + | chr1.3:27147874-27147893 | MS.gene68390:intron | 20.0% |
| !!! | TTTCAAGATTTAAAGTTTCT+AGG | + | chr1.3:27147873-27147892 | MS.gene68390:intron | 20.0% |
| !!! | TTTTAGACAAAATAAGTTTG+AGG | - | chr1.3:27147356-27147375 | None:intergenic | 20.0% |
| ! | AAGCTTTCATCTATGTTAAT+CGG | - | chr1.3:27147027-27147046 | None:intergenic | 25.0% |
| ! | AAGGTTAACATATGATATGT+TGG | - | chr1.3:27146617-27146636 | None:intergenic | 25.0% |
| ! | AAGTTTAACAAAGAGTTCTA+CGG | - | chr1.3:27146721-27146740 | None:intergenic | 25.0% |
| ! | AATTGATGTAACAATATAGG+AGG | + | chr1.3:27146474-27146493 | MS.gene68390:intron | 25.0% |
| ! | ACAATTAAGCCAAAACTAAT+AGG | + | chr1.3:27147564-27147583 | MS.gene68390:intron | 25.0% |
| ! | AGGTTAACATATGATATGTT+GGG | - | chr1.3:27146616-27146635 | None:intergenic | 25.0% |
| ! | CTTTAAATCATACATAAAGC+TGG | - | chr1.3:27148435-27148454 | None:intergenic | 25.0% |
| ! | GATGAAATCATGTTCAAAAT+TGG | + | chr1.3:27146053-27146072 | MS.gene68390:intron | 25.0% |
| ! | TAATTGCAATACCGTAATAT+TGG | + | chr1.3:27147590-27147609 | MS.gene68390:intron | 25.0% |
| ! | TATGATTACCTTGATTATGT+AGG | - | chr1.3:27146589-27146608 | None:intergenic | 25.0% |
| !! | ACCTTTTTATTAGAGTTAAC+CGG | - | chr1.3:27147637-27147656 | None:intergenic | 25.0% |
| !! | ATAATGATATGCGTTTTTGT+TGG | + | chr1.3:27147102-27147121 | MS.gene68390:intron | 25.0% |
| !! | GCAATTATTTAACTTTGCAA+GGG | - | chr1.3:27147003-27147022 | None:intergenic | 25.0% |
| !! | TACACTATTAATTGCAGTTT+TGG | + | chr1.3:27147325-27147344 | MS.gene68390:intron | 25.0% |
| !! | TGCAATTATTTAACTTTGCA+AGG | - | chr1.3:27147004-27147023 | None:intergenic | 25.0% |
| !! | TTCTGCTATAGATCATTTTA+TGG | - | chr1.3:27148462-27148481 | None:intergenic | 25.0% |
| !!! | TACTGTGTTTTGTTTTTTTG+AGG | + | chr1.3:27147800-27147819 | MS.gene68390:intron | 25.0% |
| !!! | TTATTTTAGTGTTCTTCACA+AGG | - | chr1.3:27145941-27145960 | None:intergenic | 25.0% |
| !!! | TTTTGGCTTAATTGTAGTTT+TGG | - | chr1.3:27147559-27147578 | None:intergenic | 25.0% |
| AAAACTATCTTCTGATACCA+AGG | + | chr1.3:27147301-27147320 | MS.gene68390:intron | 30.0% | |
| AAATCACAACAGTAACATGA+AGG | - | chr1.3:27146875-27146894 | None:intergenic | 30.0% | |
| AGTTTATCAATGAAGGTTAG+TGG | + | chr1.3:27145699-27145718 | MS.gene68390:intron | 30.0% | |
| ATCAAAAGCTCTTTGAACTT+GGG | + | chr1.3:27148028-27148047 | MS.gene68390:CDS | 30.0% | |
| ATCCTATGATGAATTCCATA+TGG | - | chr1.3:27146017-27146036 | None:intergenic | 30.0% | |
| ATGGAAATATTTCACGAATG+AGG | - | chr1.3:27147132-27147151 | None:intergenic | 30.0% | |
| ATGGAGAAGTTTATCAATGA+AGG | + | chr1.3:27145692-27145711 | MS.gene68390:CDS | 30.0% | |
| CAAATTATCTGGTTATCTCA+TGG | + | chr1.3:27147267-27147286 | MS.gene68390:intron | 30.0% | |
| GGTTAAATATGTTAGACATC+CGG | + | chr1.3:27147615-27147634 | MS.gene68390:intron | 30.0% | |
| GTTAAACTTAATCTACACCT+TGG | + | chr1.3:27146732-27146751 | MS.gene68390:intron | 30.0% | |
| TAACATATGATATGTTGGGT+GGG | - | chr1.3:27146612-27146631 | None:intergenic | 30.0% | |
| TATCTATTAGAACTGCTTAG+AGG | - | chr1.3:27145856-27145875 | None:intergenic | 30.0% | |
| TCCGGTTAACTCTAATAAAA+AGG | + | chr1.3:27147633-27147652 | MS.gene68390:intron | 30.0% | |
| TCCTATGATGAATTCCATAT+GGG | - | chr1.3:27146016-27146035 | None:intergenic | 30.0% | |
| TGCAATTAATAGTGTATCCT+TGG | - | chr1.3:27147321-27147340 | None:intergenic | 30.0% | |
| TGCACATTATTGTGAAGAAA+GGG | - | chr1.3:27148595-27148614 | None:intergenic | 30.0% | |
| TTAACATATGATATGTTGGG+TGG | - | chr1.3:27146613-27146632 | None:intergenic | 30.0% | |
| ! | AAAATGTGAGCATTTTGCTT+TGG | - | chr1.3:27146402-27146421 | None:intergenic | 30.0% |
| ! | AGCAGTTCTAATAGATATGA+TGG | + | chr1.3:27145859-27145878 | MS.gene68390:intron | 30.0% |
| ! | AGTCTTTTCATTCTAAGTTC+TGG | + | chr1.3:27147195-27147214 | MS.gene68390:intron | 30.0% |
| ! | TAATGATTCTCATTTGTTGC+AGG | + | chr1.3:27147972-27147991 | MS.gene68390:intron | 30.0% |
| ! | TTCAGAGAACACTTCTAAAA+AGG | - | chr1.3:27146439-27146458 | None:intergenic | 30.0% |
| ! | TTTCTTTGCTGATTATACTG+AGG | + | chr1.3:27148002-27148021 | MS.gene68390:CDS | 30.0% |
| ! | TTTGAGAATGTTGGTGAATT+CGG | + | chr1.3:27147824-27147843 | MS.gene68390:intron | 30.0% |
| !! | TAATACTTGGTGCTTTGATT+CGG | + | chr1.3:27147726-27147745 | MS.gene68390:intron | 30.0% |
| !!! | ACTTTGTTTTTTGTCTGTTC+CGG | + | chr1.3:27147701-27147720 | MS.gene68390:intron | 30.0% |
| !!! | AGAAGATAGTTTTGATAGCA+AGG | - | chr1.3:27147294-27147313 | None:intergenic | 30.0% |
| !!! | TGATTTTGGTTATGTGTTGT+TGG | + | chr1.3:27147915-27147934 | MS.gene68390:intron | 30.0% |
| !!! | TTTTGAGGTTTTGAGAATGT+TGG | + | chr1.3:27147815-27147834 | MS.gene68390:intron | 30.0% |
| AACAAAGAGTTCTACGGAAT+TGG | - | chr1.3:27146715-27146734 | None:intergenic | 35.0% | |
| AACACATAACCAAAATCAGC+AGG | - | chr1.3:27147913-27147932 | None:intergenic | 35.0% | |
| AAGTGGTTGAATAGTGTAGT+TGG | + | chr1.3:27148522-27148541 | MS.gene68390:intron | 35.0% | |
| AGTTCTACGGAATTGGAATT+TGG | - | chr1.3:27146708-27146727 | None:intergenic | 35.0% | |
| AGTTGATTGTGGAAGAGAAA+TGG | + | chr1.3:27146911-27146930 | MS.gene68390:intron | 35.0% | |
| CAGAAATTCGATGAATACCT+TGG | + | chr1.3:27148477-27148496 | MS.gene68390:intron | 35.0% | |
| CAGATATAGTCGCTATTGTA+AGG | - | chr1.3:27146088-27146107 | None:intergenic | 35.0% | |
| CATCAAAAGCTCTTTGAACT+TGG | + | chr1.3:27148027-27148046 | MS.gene68390:CDS | 35.0% | |
| CATTGATGAGAAAGAGCTAA+TGG | + | chr1.3:27145673-27145692 | MS.gene68390:CDS | 35.0% | |
| CTGCACATTATTGTGAAGAA+AGG | - | chr1.3:27148596-27148615 | None:intergenic | 35.0% | |
| CTTTCTTCACAATAATGTGC+AGG | + | chr1.3:27148594-27148613 | MS.gene68390:intron | 35.0% | |
| GAAATATTTCACGAATGAGG+AGG | - | chr1.3:27147129-27147148 | None:intergenic | 35.0% | |
| GATCAACTCCTACATAATCA+AGG | + | chr1.3:27146578-27146597 | MS.gene68390:CDS | 35.0% | |
| GCACATTATTGTGAAGAAAG+GGG | - | chr1.3:27148594-27148613 | None:intergenic | 35.0% | |
| GCACCTATTATTTCCGTAAA+TGG | + | chr1.3:27146535-27146554 | MS.gene68390:CDS | 35.0% | |
| GCTCCATTTACGGAAATAAT+AGG | - | chr1.3:27146541-27146560 | None:intergenic | 35.0% | |
| TCAAGTAATCATGTCCCATA+TGG | + | chr1.3:27145999-27146018 | MS.gene68390:intron | 35.0% | |
| TCACAATAATGTGCAGGAAA+AGG | + | chr1.3:27148600-27148619 | MS.gene68390:intron | 35.0% | |
| TCCCATATGGAATTCATCAT+AGG | + | chr1.3:27146012-27146031 | MS.gene68390:intron | 35.0% | |
| TGCAATACCGTAATATTGGT+TGG | + | chr1.3:27147594-27147613 | MS.gene68390:intron | 35.0% | |
| TTGGAGAAGCAAAAATCGTT+TGG | - | chr1.3:27145801-27145820 | None:intergenic | 35.0% | |
| ! | AAGCTAGCAAAGAGTATGAA+GGG | + | chr1.3:27146956-27146975 | MS.gene68390:intron | 35.0% |
| ! | AATGTTGGTGAATTCGGATT+TGG | + | chr1.3:27147830-27147849 | MS.gene68390:intron | 35.0% |
| ! | ACTCTTTGCTAGCTTAGTTA+TGG | - | chr1.3:27146951-27146970 | None:intergenic | 35.0% |
| ! | CAAAGCACCAAGTATTAAAC+CGG | - | chr1.3:27147723-27147742 | None:intergenic | 35.0% |
| ! | CATTAGCTCTTTCTCATCAA+TGG | - | chr1.3:27145675-27145694 | None:intergenic | 35.0% |
| ! | CTTTTTATGCAATCTGTCCA+AGG | - | chr1.3:27146752-27146771 | None:intergenic | 35.0% |
| ! | TAAGCTAGCAAAGAGTATGA+AGG | + | chr1.3:27146955-27146974 | MS.gene68390:intron | 35.0% |
| !! | GTTGGCACAGTTTTATGATT+TGG | + | chr1.3:27147762-27147781 | MS.gene68390:intron | 35.0% |
| !!! | GCAAAGCTGAATTTTTTCAC+TGG | - | chr1.3:27148272-27148291 | None:intergenic | 35.0% |
| AATGAGCTGACAGACACTAT+AGG | - | chr1.3:27147157-27147176 | None:intergenic | 40.0% | |
| ACACAGTAACACATCCAAAC+CGG | - | chr1.3:27147788-27147807 | None:intergenic | 40.0% | |
| AGAATGACAAGGAGAGAAGA+TGG | + | chr1.3:27146513-27146532 | MS.gene68390:CDS | 40.0% | |
| AGGAAGAGATGCTCCATTTA+CGG | - | chr1.3:27146551-27146570 | None:intergenic | 40.0% | |
| ATGAGCTGACAGACACTATA+GGG | - | chr1.3:27147156-27147175 | None:intergenic | 40.0% | |
| CTCTTCCACAATCAACTCAT+GGG | - | chr1.3:27146908-27146927 | None:intergenic | 40.0% | |
| GTCTGTTCCGGTTTAATACT+TGG | + | chr1.3:27147713-27147732 | MS.gene68390:intron | 40.0% | |
| TCAAGGAGAGAAGAATGACA+AGG | + | chr1.3:27146502-27146521 | MS.gene68390:CDS | 40.0% | |
| TCTCTTCCACAATCAACTCA+TGG | - | chr1.3:27146909-27146928 | None:intergenic | 40.0% | |
| !! | GCACAGTTTTATGATTTGGC+CGG | + | chr1.3:27147766-27147785 | MS.gene68390:intron | 40.0% |
| !! | GTTTTATGATTTGGCCGGTT+TGG | + | chr1.3:27147771-27147790 | MS.gene68390:intron | 40.0% |
| !!! | TGGTGCTTTGATTCGGTTTT+TGG | + | chr1.3:27147733-27147752 | MS.gene68390:intron | 40.0% |
| CAATATAGGAGGTCGTGTCA+AGG | + | chr1.3:27146485-27146504 | MS.gene68390:intron | 45.0% | |
| CTGACAGACACTATAGGGTA+TGG | - | chr1.3:27147151-27147170 | None:intergenic | 45.0% | |
| ! | ATGGAGCATCTCTTCCTGTT+TGG | + | chr1.3:27146554-27146573 | MS.gene68390:CDS | 45.0% |
| ! | GTAGGAGTTGATCTCCAAAC+AGG | - | chr1.3:27146571-27146590 | None:intergenic | 45.0% |
| ! | GTTGGTGAATTCGGATTTGG+TGG | + | chr1.3:27147833-27147852 | MS.gene68390:intron | 45.0% |
| !! | AGAGTCCCATGAGTTGATTG+TGG | + | chr1.3:27146900-27146919 | MS.gene68390:intron | 45.0% |
| !!! | GAGTTTGTGCCTGCTGATTT+TGG | + | chr1.3:27147901-27147920 | MS.gene68390:intron | 45.0% |
| !!! | TTCGGTTTTTGGCGTTGAGT+TGG | + | chr1.3:27147744-27147763 | MS.gene68390:intron | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 27145659 | 27148625 | 27145659 | ID=MS.gene68390 |
| chr1.3 | mRNA | 27145659 | 27148625 | 27145659 | ID=MS.gene68390.t1;Parent=MS.gene68390 |
| chr1.3 | exon | 27145659 | 27145713 | 27145659 | ID=MS.gene68390.t1.exon1;Parent=MS.gene68390.t1 |
| chr1.3 | CDS | 27145659 | 27145713 | 27145659 | ID=cds.MS.gene68390.t1;Parent=MS.gene68390.t1 |
| chr1.3 | exon | 27146493 | 27146599 | 27146493 | ID=MS.gene68390.t1.exon2;Parent=MS.gene68390.t1 |
| chr1.3 | CDS | 27146493 | 27146599 | 27146493 | ID=cds.MS.gene68390.t1;Parent=MS.gene68390.t1 |
| chr1.3 | exon | 27147994 | 27148049 | 27147994 | ID=MS.gene68390.t1.exon3;Parent=MS.gene68390.t1 |
| chr1.3 | CDS | 27147994 | 27148049 | 27147994 | ID=cds.MS.gene68390.t1;Parent=MS.gene68390.t1 |
| chr1.3 | exon | 27148616 | 27148625 | 27148616 | ID=MS.gene68390.t1.exon4;Parent=MS.gene68390.t1 |
| chr1.3 | CDS | 27148616 | 27148625 | 27148616 | ID=cds.MS.gene68390.t1;Parent=MS.gene68390.t1 |
| Gene Sequence |
| Protein sequence |
