AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51189


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51189.t1 MTR_7g079400 65.696 309 91 3 72 365 29 337 1.36e-129 375
MS.gene51189.t1 MTR_8g102520 56.911 369 108 8 1 365 1 322 3.12e-127 368
MS.gene51189.t1 MTR_2g048580 51.862 376 136 11 1 365 1 342 4.68e-108 320
MS.gene51189.t1 MTR_7g079370 52.047 342 146 6 37 363 16 354 5.47e-97 293
MS.gene51189.t1 MTR_6g060650 44.271 384 182 10 1 364 1 372 2.01e-83 258
MS.gene51189.t1 MTR_5g070080 43.291 395 179 13 3 365 5 386 4.86e-83 258
MS.gene51189.t1 MTR_3g103020 44.947 376 176 12 6 365 18 378 1.84e-82 256
MS.gene51189.t1 MTR_3g034180 44.737 380 188 12 1 364 115 488 2.95e-81 256
MS.gene51189.t1 MTR_4g023080 45.308 373 175 12 1 364 1 353 9.64e-81 251
MS.gene51189.t1 MTR_3g034130 43.785 354 176 10 2 338 3 350 5.09e-80 249
MS.gene51189.t1 MTR_5g070088 42.564 390 179 12 3 359 2 379 5.69e-80 250
MS.gene51189.t1 MTR_4g109270 44.855 379 180 12 1 365 1 364 8.55e-79 246
MS.gene51189.t1 MTR_4g109280 45.040 373 183 12 1 365 1 359 2.58e-78 244
MS.gene51189.t1 MTR_4g116330 44.533 375 184 10 3 365 18 380 7.34e-78 244
MS.gene51189.t1 MTR_5g070130 44.180 378 183 14 1 360 4 371 6.42e-76 239
MS.gene51189.t1 MTR_4g117770 43.979 382 182 11 1 365 1 367 9.36e-76 238
MS.gene51189.t1 MTR_4g117810 43.979 382 182 11 1 365 1 367 9.36e-76 238
MS.gene51189.t1 MTR_4g094365 40.000 390 183 13 1 365 1 364 5.42e-74 234
MS.gene51189.t1 MTR_3g034160 43.152 387 184 13 1 364 1 374 3.01e-73 232
MS.gene51189.t1 MTR_4g118380 41.689 367 174 9 1 337 1 357 3.43e-73 231
MS.gene51189.t1 MTR_4g117850 43.407 364 182 13 7 358 22 373 4.27e-73 232
MS.gene51189.t1 MTR_1g055135 41.333 375 203 8 2 365 7 375 1.77e-71 228
MS.gene51189.t1 MTR_4g117780 41.885 382 190 12 1 365 1 367 3.37e-71 227
MS.gene51189.t1 MTR_4g021785 41.935 372 189 11 2 365 3 355 7.57e-71 225
MS.gene51189.t1 MTR_4g023070 41.146 384 182 13 8 364 3 369 2.70e-70 224
MS.gene51189.t1 MTR_4g023130 41.351 370 153 11 1 364 1 312 1.65e-69 221
MS.gene51189.t1 MTR_4g023120 40.682 381 190 12 8 365 3 370 1.89e-69 222
MS.gene51189.t1 MTR_8g098830 65.294 170 54 2 174 339 32 200 3.73e-68 214
MS.gene51189.t1 MTR_8g433040 40.568 387 171 18 3 365 13 364 1.10e-67 218
MS.gene51189.t1 MTR_8g032380 40.568 387 171 18 3 365 13 364 1.10e-67 218
MS.gene51189.t1 MTR_8g032390 40.811 370 171 13 3 359 35 369 9.64e-67 215
MS.gene51189.t1 MTR_4g117750 42.359 373 186 10 6 364 1 358 2.54e-66 218
MS.gene51189.t1 MTR_4g117750 39.437 142 61 7 241 363 346 481 6.26e-13 70.1
MS.gene51189.t1 MTR_4g116330 41.509 371 162 10 3 365 18 341 3.05e-66 213
MS.gene51189.t1 MTR_4g023090 40.674 386 174 14 7 359 15 378 6.10e-65 211
MS.gene51189.t1 MTR_5g097210 40.108 369 196 12 3 360 4 358 2.09e-64 209
MS.gene51189.t1 MTR_4g117720 39.153 378 163 12 1 360 44 372 5.46e-64 208
MS.gene51189.t1 MTR_4g122850 41.873 363 185 16 19 365 12 364 3.10e-63 206
MS.gene51189.t1 MTR_7g079450 73.529 136 36 0 230 365 2 137 7.54e-63 197
MS.gene51189.t1 MTR_7g079420 48.913 276 87 8 108 365 905 1144 1.98e-62 216
MS.gene51189.t1 MTR_4g023440 41.322 363 162 12 7 365 17 332 9.37e-61 199
MS.gene51189.t1 MTR_4g023190 41.600 375 183 13 3 363 5 357 3.16e-60 198
MS.gene51189.t1 MTR_4g023380 39.340 394 169 13 3 359 11 371 3.27e-60 199
MS.gene51189.t1 MTR_8g433030 39.011 364 153 13 3 359 35 336 6.25e-57 189
MS.gene51189.t1 MTR_8g013010 43.478 276 134 10 1 267 47 309 1.44e-56 187
MS.gene51189.t1 MTR_4g023150 40.053 377 187 14 3 363 5 358 1.54e-56 188
MS.gene51189.t1 MTR_4g023200 41.333 375 185 14 3 363 5 358 2.34e-53 180
MS.gene51189.t1 MTR_1g055165 34.865 370 170 11 7 365 9 318 4.66e-51 173
MS.gene51189.t1 MTR_4g121580 39.489 352 158 16 1 331 1 318 2.84e-50 173
MS.gene51189.t1 MTR_1g055195 38.182 275 138 7 105 365 222 478 1.16e-46 166
MS.gene51189.t1 MTR_4g117870 38.206 301 139 10 72 365 7 267 6.33e-44 153
MS.gene51189.t1 MTR_4g118370 40.244 246 120 8 122 362 34 257 1.25e-40 144
MS.gene51189.t1 MTR_5g069120 50.276 181 75 5 18 186 1 178 1.31e-39 139
MS.gene51189.t1 MTR_4g118400 39.080 261 124 11 103 359 65 294 1.44e-39 142
MS.gene51189.t1 MTR_4g116320 42.130 216 113 8 152 360 43 253 2.06e-38 138
MS.gene51189.t1 MTR_4g107820 32.423 293 178 7 8 293 36 315 2.87e-38 141
MS.gene51189.t1 MTR_4g107780 32.423 293 178 7 8 293 36 315 2.87e-38 141
MS.gene51189.t1 MTR_4g107780 32.423 293 178 7 8 293 36 315 4.58e-38 141
MS.gene51189.t1 MTR_4g107820 32.423 293 178 7 8 293 36 315 5.18e-38 141
MS.gene51189.t1 MTR_1g055175 40.102 197 110 5 175 365 7 201 2.59e-36 131
MS.gene51189.t1 MTR_4g117530 37.946 224 96 6 144 365 71 253 5.22e-35 129
MS.gene51189.t1 MTR_4g116340 38.000 250 112 9 1 235 26 247 2.43e-34 127
MS.gene51189.t1 MTR_4g108820 33.218 289 148 10 7 293 41 286 1.64e-33 127
MS.gene51189.t1 MTR_8g040935 41.919 198 103 7 177 365 14 208 1.78e-33 124
MS.gene51189.t1 MTR_7g070830 27.873 409 229 14 8 358 21 421 3.08e-31 122
MS.gene51189.t1 MTR_8g467140 32.566 304 167 11 6 291 30 313 1.06e-30 119
MS.gene51189.t1 MTR_3g013740 31.366 322 170 15 3 293 39 340 3.18e-30 120
MS.gene51189.t1 MTR_1g094210 29.412 340 206 13 8 333 57 376 3.36e-30 119
MS.gene51189.t1 MTR_4g114700 34.082 267 110 7 104 356 4 218 2.26e-29 114
MS.gene51189.t1 MTR_7g070880 28.256 407 230 13 8 358 21 421 2.37e-29 117
MS.gene51189.t1 MTR_1g094210 29.143 350 178 14 8 325 57 368 2.42e-29 117
MS.gene51189.t1 MTR_2g021150 28.402 338 191 15 7 315 13 328 2.73e-29 116
MS.gene51189.t1 MTR_3g009310 30.820 305 178 12 8 297 42 328 8.80e-29 115
MS.gene51189.t1 MTR_6g463430 39.196 199 101 7 176 365 15 202 1.14e-28 110
MS.gene51189.t1 MTR_1g097330 31.741 293 176 8 8 291 16 293 3.38e-28 114
MS.gene51189.t1 MTR_2g055970 30.818 318 156 10 5 291 208 492 3.86e-28 115
MS.gene51189.t1 MTR_3g014540 30.519 308 165 10 8 291 29 311 4.66e-28 113
MS.gene51189.t1 MTR_5g022420 32.770 296 171 14 7 295 26 300 5.16e-28 113
MS.gene51189.t1 MTR_3g036290 29.492 295 180 11 8 296 22 294 3.37e-27 110
MS.gene51189.t1 MTR_8g101580 30.671 313 169 13 8 297 45 332 8.96e-27 110
MS.gene51189.t1 MTR_1g055250 34.934 229 139 7 135 358 37 260 1.05e-26 108
MS.gene51189.t1 MTR_3g007330 30.519 308 168 12 8 296 48 328 1.65e-26 109
MS.gene51189.t1 MTR_3g009240 30.693 303 165 12 8 291 36 312 1.81e-26 108
MS.gene51189.t1 MTR_2g046900 29.703 303 191 12 4 293 24 317 2.05e-26 108
MS.gene51189.t1 MTR_4g055060 28.939 311 181 13 8 296 30 322 2.72e-26 108
MS.gene51189.t1 MTR_5g057710 27.703 296 187 10 8 291 46 326 7.58e-26 107
MS.gene51189.t1 MTR_5g057690 26.370 292 186 10 8 291 46 316 8.92e-26 107
MS.gene51189.t1 MTR_3g007360 29.503 322 175 11 11 301 55 355 9.55e-26 107
MS.gene51189.t1 MTR_2g029990 30.000 310 163 14 9 291 52 334 1.44e-25 107
MS.gene51189.t1 MTR_1g054575 31.058 293 174 11 8 290 52 326 1.61e-25 108
MS.gene51189.t1 MTR_2g046920 29.412 306 186 12 1 293 17 305 1.83e-25 106
MS.gene51189.t1 MTR_5g069930 28.125 320 184 11 6 296 4 306 3.73e-25 105
MS.gene51189.t1 MTR_3g007410 28.704 324 175 11 11 301 55 355 3.78e-25 105
MS.gene51189.t1 MTR_3g010390 27.761 335 167 14 8 297 33 337 4.14e-25 105
MS.gene51189.t1 MTR_6g065980 29.739 306 154 15 8 291 16 282 4.35e-25 104
MS.gene51189.t1 MTR_3g006670 31.126 302 172 12 8 291 49 332 6.97e-25 105
MS.gene51189.t1 MTR_3g023930 29.861 288 171 10 8 291 34 294 1.08e-24 103
MS.gene51189.t1 MTR_4g133170 27.483 302 181 12 8 291 4 285 1.60e-24 103
MS.gene51189.t1 MTR_6g017280 26.781 351 203 12 6 315 7 344 2.18e-24 103
MS.gene51189.t1 MTR_7g057270 30.488 328 175 13 8 296 26 339 2.31e-24 103
MS.gene51189.t1 MTR_5g069760 29.012 324 171 12 6 296 4 301 4.40e-24 102
MS.gene51189.t1 MTR_3g013770 28.097 331 161 13 8 298 33 326 7.45e-24 101
MS.gene51189.t1 MTR_5g057790 28.197 305 174 13 8 291 46 326 7.62e-24 102
MS.gene51189.t1 MTR_3g072470 30.060 336 166 15 8 296 19 332 8.03e-24 102
MS.gene51189.t1 MTR_3g014570 29.801 302 185 9 8 296 29 316 8.43e-24 101
MS.gene51189.t1 MTR_3g009260 28.852 305 181 12 11 303 44 324 1.21e-23 101
MS.gene51189.t1 MTR_7g070440 29.003 331 191 14 5 308 4 317 1.24e-23 100
MS.gene51189.t1 MTR_7g062100 28.076 317 184 9 8 296 24 324 1.42e-23 101
MS.gene51189.t1 MTR_3g010520 31.104 299 154 15 8 291 25 286 1.60e-23 100
MS.gene51189.t1 MTR_1g115160 28.383 303 175 13 6 293 20 295 1.94e-23 100
MS.gene51189.t1 MTR_4g061340 29.316 307 183 10 8 296 26 316 2.58e-23 100
MS.gene51189.t1 MTR_4g117430 43.182 132 62 4 120 250 14 133 2.59e-23 95.1
MS.gene51189.t1 MTR_1g055070 29.259 270 149 10 8 249 49 304 2.62e-23 100
MS.gene51189.t1 MTR_2g047832 29.231 325 182 15 1 293 22 330 2.72e-23 100
MS.gene51189.t1 MTR_7g055870 26.357 387 202 15 1 315 6 381 2.86e-23 100
MS.gene51189.t1 MTR_7g028660 28.616 318 183 10 6 293 9 312 3.34e-23 99.8
MS.gene51189.t1 MTR_7g117720 39.024 205 88 9 1 193 1 180 3.39e-23 97.8
MS.gene51189.t1 MTR_7g117720 48.276 87 40 3 279 360 186 272 3.85e-12 66.2
MS.gene51189.t1 MTR_4g030830 25.067 371 225 13 8 334 9 370 3.95e-23 99.8
MS.gene51189.t1 MTR_7g055930 26.098 387 203 14 1 315 6 381 4.86e-23 99.8
MS.gene51189.t1 MTR_7g056290 28.947 342 174 15 2 296 17 336 4.94e-23 99.8
MS.gene51189.t1 MTR_7g445890 26.415 371 206 12 1 333 9 350 5.15e-23 99.4
MS.gene51189.t1 MTR_5g046300 27.815 302 174 12 8 291 4 279 8.11e-23 98.2
MS.gene51189.t1 MTR_5g046290 27.815 302 174 12 8 291 4 279 8.11e-23 98.2
MS.gene51189.t1 MTR_1g097560 31.068 309 160 17 5 293 33 308 8.31e-23 98.6
MS.gene51189.t1 MTR_0128s0020 28.963 328 175 12 5 296 15 320 8.35e-23 99.0
MS.gene51189.t1 MTR_3g007270 30.128 312 171 15 8 291 47 339 8.56e-23 99.0
MS.gene51189.t1 MTR_7g056760 27.795 331 182 13 6 296 21 334 9.10e-23 99.0
MS.gene51189.t1 MTR_3g013950 27.887 355 197 12 5 315 4 343 9.46e-23 98.6
MS.gene51189.t1 MTR_3g083640 27.362 307 197 10 8 306 55 343 1.07e-22 98.6
MS.gene51189.t1 MTR_5g011200 28.344 314 178 17 8 297 17 307 1.69e-22 97.8
MS.gene51189.t1 MTR_4g013180 26.685 371 220 15 7 335 10 370 1.74e-22 98.6
MS.gene51189.t1 MTR_1g050542 28.571 294 178 11 8 290 58 330 1.76e-22 98.2
MS.gene51189.t1 MTR_3g030240 28.333 300 164 11 8 291 40 304 2.27e-22 97.4
MS.gene51189.t1 MTR_7g055977 28.354 328 172 10 6 296 5 306 2.44e-22 97.4
MS.gene51189.t1 MTR_4g030980 26.136 352 185 10 8 296 15 354 2.63e-22 97.8
MS.gene51189.t1 MTR_4g024890 28.296 311 193 13 7 296 9 310 2.69e-22 97.4
MS.gene51189.t1 MTR_7g066100 27.711 332 189 12 4 296 7 326 3.06e-22 97.4
MS.gene51189.t1 MTR_1g088120 27.523 327 193 12 6 296 8 326 3.96e-22 97.1
MS.gene51189.t1 MTR_3g011060 28.664 307 182 12 8 291 28 320 4.33e-22 96.7
MS.gene51189.t1 MTR_3g036430 28.283 297 153 12 8 291 20 269 5.09e-22 95.9
MS.gene51189.t1 MTR_2g046800 29.167 336 174 15 3 293 9 325 8.27e-22 95.9
MS.gene51189.t1 MTR_0267s0050 27.119 354 188 10 11 315 9 341 8.53e-22 95.9
MS.gene51189.t1 MTR_6g053240 26.471 306 186 8 8 291 28 316 9.78e-22 95.9
MS.gene51189.t1 MTR_3g436150 28.025 314 188 13 8 296 32 332 1.31e-21 95.5
MS.gene51189.t1 MTR_6g053260 28.571 301 181 10 8 291 337 620 1.94e-21 96.3
MS.gene51189.t1 MTR_1g097490 27.548 363 235 13 5 357 46 390 2.24e-21 94.7
MS.gene51189.t1 MTR_3g007430 28.523 298 177 9 11 291 46 324 2.35e-21 94.7
MS.gene51189.t1 MTR_3g010920 29.553 291 170 11 8 291 44 306 2.35e-21 94.7
MS.gene51189.t1 MTR_7g091630 27.439 328 192 11 4 296 28 344 2.73e-21 95.1
MS.gene51189.t1 MTR_4g118360 43.651 126 66 2 245 365 1 126 2.82e-21 88.6
MS.gene51189.t1 MTR_7g407070 27.245 323 185 13 8 296 32 338 3.73e-21 94.4
MS.gene51189.t1 MTR_0115s0020 28.344 314 192 14 8 291 10 320 3.96e-21 94.0
MS.gene51189.t1 MTR_4g030090 28.526 312 185 12 8 291 14 315 5.12e-21 94.0
MS.gene51189.t1 MTR_7g077070 26.254 339 202 13 1 296 9 342 5.66e-21 94.0
MS.gene51189.t1 MTR_3g011100 29.338 317 171 15 8 296 235 526 6.70e-21 94.7
MS.gene51189.t1 MTR_7g056503 27.439 328 180 12 7 296 20 327 7.11e-21 93.6
MS.gene51189.t1 MTR_3g036335 28.053 303 188 14 8 296 41 327 7.86e-21 93.2
MS.gene51189.t1 MTR_5g057020 25.589 297 175 11 8 290 46 310 8.25e-21 92.4
MS.gene51189.t1 MTR_7g066000 27.019 322 195 12 5 296 22 333 8.88e-21 93.2
MS.gene51189.t1 MTR_0044s0300 28.896 308 165 14 8 291 38 315 1.06e-20 92.8
MS.gene51189.t1 MTR_3g464470 26.444 329 179 13 5 296 4 306 1.27e-20 92.4
MS.gene51189.t1 MTR_3g010970 27.304 293 174 10 11 291 51 316 1.83e-20 92.0
MS.gene51189.t1 MTR_2g046830 28.852 305 189 13 1 293 18 306 1.87e-20 92.0
MS.gene51189.t1 MTR_2g043410 29.012 324 181 12 8 296 22 331 2.13e-20 92.0
MS.gene51189.t1 MTR_2g025420 27.793 367 206 16 8 326 6 361 2.20e-20 92.0
MS.gene51189.t1 MTR_3g010430 27.762 353 190 17 8 330 36 353 2.59e-20 92.0
MS.gene51189.t1 MTR_7g078840 27.874 348 193 15 1 296 3 344 3.25e-20 91.7
MS.gene51189.t1 MTR_4g019990 27.434 339 191 14 5 305 3 324 3.26e-20 91.3
MS.gene51189.t1 MTR_3g024110 28.669 293 180 14 8 291 101 373 3.97e-20 91.7
MS.gene51189.t1 MTR_4g031020 26.496 351 185 14 8 296 15 354 4.41e-20 91.3
MS.gene51189.t1 MTR_3g011020 28.525 305 166 12 8 291 28 301 5.75e-20 90.5
MS.gene51189.t1 MTR_5g068040 27.129 317 175 12 8 296 16 304 6.80e-20 90.5
MS.gene51189.t1 MTR_6g027910 26.974 304 190 11 11 291 12 306 8.83e-20 90.1
MS.gene51189.t1 MTR_3g010620 28.231 294 167 13 11 291 39 301 9.10e-20 90.1
MS.gene51189.t1 MTR_5g023000 49.495 99 37 3 274 365 7 99 1.17e-19 83.6
MS.gene51189.t1 MTR_0128s0070 28.704 324 178 12 6 296 20 323 1.27e-19 89.7
MS.gene51189.t1 MTR_2g078900 26.645 304 176 10 8 291 33 309 1.31e-19 89.4
MS.gene51189.t1 MTR_3g010590 26.974 304 166 13 8 291 39 306 1.32e-19 89.7
MS.gene51189.t1 MTR_0464s0020 25.959 339 188 14 6 296 21 344 1.39e-19 89.7
MS.gene51189.t1 MTR_8g099460 25.926 324 195 9 5 300 2 308 1.41e-19 89.7
MS.gene51189.t1 MTR_7g056390 27.976 336 174 15 8 296 18 332 1.61e-19 89.7
MS.gene51189.t1 MTR_2g021190 27.673 318 162 14 8 291 21 304 2.03e-19 89.0
MS.gene51189.t1 MTR_2g006360 29.739 306 148 15 2 296 41 290 2.60e-19 88.6
MS.gene51189.t1 MTR_7g055987 28.438 320 166 15 10 296 22 311 2.64e-19 88.6
MS.gene51189.t1 MTR_1g056710 30.350 257 147 14 8 249 34 273 3.19e-19 88.6
MS.gene51189.t1 MTR_7g013590 28.904 301 175 11 11 291 39 320 3.46e-19 88.6
MS.gene51189.t1 MTR_7g056820 24.728 368 218 13 8 335 7 355 3.52e-19 88.2
MS.gene51189.t1 MTR_6g021880 27.961 304 166 12 19 291 31 312 4.09e-19 88.2
MS.gene51189.t1 MTR_6g016285 28.916 332 180 14 6 296 19 335 4.38e-19 88.6
MS.gene51189.t1 MTR_7g091640 28.875 329 180 14 5 296 32 343 4.90e-19 87.8
MS.gene51189.t1 MTR_3g010870 27.797 295 182 11 8 291 37 311 5.52e-19 87.8
MS.gene51189.t1 MTR_5g007610 27.796 313 186 14 8 296 41 337 5.54e-19 87.8
MS.gene51189.t1 MTR_3g083010 28.169 355 193 15 8 315 6 345 5.55e-19 88.2
MS.gene51189.t1 MTR_3g030330 25.797 345 198 13 8 328 20 330 5.99e-19 87.4
MS.gene51189.t1 MTR_7g066030 25.428 409 235 17 1 358 14 403 6.10e-19 87.8
MS.gene51189.t1 MTR_3g030250 27.815 302 168 10 8 291 37 306 6.66e-19 87.4
MS.gene51189.t1 MTR_8g062660 26.518 313 174 12 8 289 22 309 6.72e-19 88.6
MS.gene51189.t1 MTR_7g062060 26.647 334 200 10 2 296 6 333 7.09e-19 87.4
MS.gene51189.t1 MTR_4g023430 54.651 86 34 3 3 87 36 117 7.36e-19 84.7
MS.gene51189.t1 MTR_2g021155 30.847 295 174 14 11 291 39 317 7.69e-19 88.6
MS.gene51189.t1 MTR_2g461450 27.303 304 185 12 6 296 16 296 7.81e-19 87.0
MS.gene51189.t1 MTR_8g073550 29.843 191 124 4 7 191 29 215 7.97e-19 84.7
MS.gene51189.t1 MTR_0649s0020 27.005 374 209 16 8 335 11 366 9.14e-19 87.0
MS.gene51189.t1 MTR_6g004660 27.441 379 232 18 8 357 16 380 1.03e-18 87.0
MS.gene51189.t1 MTR_5g096710 27.964 329 167 12 5 291 20 320 1.07e-18 87.0
MS.gene51189.t1 MTR_6g017270 26.275 255 163 7 6 244 7 252 1.39e-18 86.3
MS.gene51189.t1 MTR_7g022600 28.916 332 192 11 5 296 20 347 1.46e-18 87.0
MS.gene51189.t1 MTR_4g129190 26.300 327 192 10 4 296 2 313 1.46e-18 86.7
MS.gene51189.t1 MTR_0097s0030 28.571 329 185 13 5 304 11 318 1.47e-18 86.7
MS.gene51189.t1 MTR_2g047240 28.571 329 185 13 5 304 11 318 1.47e-18 86.7
MS.gene51189.t1 MTR_2g028130 28.308 325 190 13 8 298 5 320 1.52e-18 86.7
MS.gene51189.t1 MTR_1g068860 25.938 320 187 12 6 298 2 298 1.59e-18 86.3
MS.gene51189.t1 MTR_7g056003 27.108 332 172 16 10 296 17 323 2.03e-18 86.3
MS.gene51189.t1 MTR_3g464500 25.070 359 209 14 5 320 24 365 2.14e-18 86.3
MS.gene51189.t1 MTR_6g055210 26.243 362 211 14 7 320 21 374 3.31e-18 85.9
MS.gene51189.t1 MTR_2g028140 27.187 320 190 11 8 291 5 317 3.45e-18 85.9
MS.gene51189.t1 MTR_4g013185 25.000 340 197 11 6 296 8 338 3.98e-18 85.5
MS.gene51189.t1 MTR_7g078860 25.076 327 204 9 2 296 3 320 4.23e-18 85.1
MS.gene51189.t1 MTR_3g024150 25.926 297 182 12 11 291 38 312 4.55e-18 85.1
MS.gene51189.t1 MTR_3g006500 28.065 310 167 16 8 291 17 296 5.55e-18 84.7
MS.gene51189.t1 MTR_6g007135 28.808 302 186 11 8 291 26 316 5.70e-18 84.7
MS.gene51189.t1 MTR_2g047892 25.926 324 188 13 6 295 20 325 6.25e-18 84.7
MS.gene51189.t1 MTR_0242s0060 26.667 330 186 12 6 293 7 322 6.44e-18 85.1
MS.gene51189.t1 MTR_0242s0040 26.667 330 186 12 6 293 7 322 6.44e-18 85.1
MS.gene51189.t1 MTR_4g037465 26.901 342 203 13 8 315 21 349 6.59e-18 84.7
MS.gene51189.t1 MTR_2g047200 26.888 331 180 14 6 296 18 326 9.44e-18 84.3
MS.gene51189.t1 MTR_7g077970 26.769 325 192 12 8 293 7 324 1.02e-17 84.3
MS.gene51189.t1 MTR_0064s0160 26.140 329 196 13 1 291 35 354 1.22e-17 84.3
MS.gene51189.t1 MTR_4g030760 24.638 345 216 12 3 321 68 394 1.52e-17 84.0
MS.gene51189.t1 MTR_7g077990 26.398 322 187 11 6 296 15 317 1.55e-17 83.6
MS.gene51189.t1 MTR_1g068835 25.552 317 186 10 8 298 4 296 1.79e-17 83.2
MS.gene51189.t1 MTR_7g056797 26.866 335 180 11 5 296 20 332 1.82e-17 83.6
MS.gene51189.t1 MTR_7g052670 27.394 376 194 17 6 315 19 381 2.10e-17 83.6
MS.gene51189.t1 MTR_3g030350 28.289 304 172 14 8 291 35 312 2.14e-17 83.2
MS.gene51189.t1 MTR_2g028110 28.615 325 179 14 8 303 4 304 2.48e-17 82.8
MS.gene51189.t1 MTR_3g058480 27.799 259 156 9 8 249 39 283 2.66e-17 82.4
MS.gene51189.t1 MTR_4g109290 35.897 156 69 4 7 161 8 133 3.20e-17 79.3
MS.gene51189.t1 MTR_5g056020 26.197 355 203 15 8 312 17 362 4.00e-17 82.8
MS.gene51189.t1 MTR_1g112930 25.773 291 192 11 8 290 25 299 4.04e-17 82.4
MS.gene51189.t1 MTR_7g056200 26.844 339 149 13 6 296 21 308 4.23e-17 82.4
MS.gene51189.t1 MTR_2g047878 25.683 366 206 13 5 340 18 347 4.56e-17 82.0
MS.gene51189.t1 MTR_5g046260 24.916 297 159 11 8 291 4 249 4.71e-17 81.3
MS.gene51189.t1 MTR_4g031770 25.552 317 182 14 8 298 4 292 5.47e-17 81.6
MS.gene51189.t1 MTR_1g068875 27.044 318 179 13 8 298 4 295 5.81e-17 81.6
MS.gene51189.t1 MTR_7g061060 24.251 334 189 13 2 296 7 315 5.82e-17 82.0
MS.gene51189.t1 MTR_3g007300 27.124 306 155 12 8 296 49 303 6.17e-17 81.6
MS.gene51189.t1 MTR_7g056260 26.019 319 190 11 8 296 14 316 8.68e-17 80.5
MS.gene51189.t1 MTR_6g013270 27.974 311 176 11 8 293 29 316 9.22e-17 81.3
MS.gene51189.t1 MTR_7g056710 26.420 352 189 12 7 315 17 341 1.09e-16 80.9
MS.gene51189.t1 MTR_3g058440 25.984 254 165 7 8 249 35 277 1.11e-16 80.1
MS.gene51189.t1 MTR_0128s0010 27.445 317 185 11 5 291 18 319 1.20e-16 80.9
MS.gene51189.t1 MTR_3g011650 32.287 223 118 11 11 222 82 282 1.26e-16 79.7
MS.gene51189.t1 MTR_7g007300 26.452 310 190 10 8 304 103 387 1.39e-16 81.3
MS.gene51189.t1 MTR_2g031680 25.868 317 184 11 8 298 6 297 1.54e-16 80.5
MS.gene51189.t1 MTR_4g030110 26.110 383 187 18 2 332 24 362 1.70e-16 80.5
MS.gene51189.t1 MTR_6g048140 27.036 307 179 12 8 291 39 323 1.72e-16 80.5
MS.gene51189.t1 MTR_5g009060 28.060 335 187 16 8 299 25 348 1.90e-16 80.5
MS.gene51189.t1 MTR_3g009250 31.081 222 121 10 11 222 44 243 1.95e-16 78.6
MS.gene51189.t1 MTR_7g061050 24.709 344 172 12 2 296 7 312 1.97e-16 80.1
MS.gene51189.t1 MTR_6g086920 27.247 356 179 13 6 291 36 381 2.07e-16 80.9
MS.gene51189.t1 MTR_7g066010 26.471 340 156 17 1 296 14 303 2.11e-16 80.1
MS.gene51189.t1 MTR_3g437520 24.854 342 191 14 6 296 21 347 2.13e-16 80.5
MS.gene51189.t1 MTR_0707s0020 27.247 356 179 13 6 291 24 369 2.36e-16 80.5
MS.gene51189.t1 MTR_5g057040 28.796 191 123 4 8 191 46 230 4.02e-16 80.5
MS.gene51189.t1 MTR_4g011660 27.381 336 192 13 5 296 16 343 4.27e-16 79.3
MS.gene51189.t1 MTR_3g030310 25.649 308 183 11 8 291 21 306 5.69e-16 79.0
MS.gene51189.t1 MTR_6g034720 46.465 99 46 3 145 241 71 164 6.69e-16 76.3
MS.gene51189.t1 MTR_7g035295 25.389 386 192 17 6 340 14 354 6.69e-16 78.6
MS.gene51189.t1 MTR_7g052150 27.245 323 181 13 6 296 20 320 6.95e-16 78.6
MS.gene51189.t1 MTR_2g021050 27.848 316 173 13 8 298 5 290 7.11e-16 78.6
MS.gene51189.t1 MTR_7g067680 25.418 299 172 11 8 291 49 311 1.70e-15 77.4
MS.gene51189.t1 MTR_2g426020 24.646 353 220 11 8 329 6 343 1.94e-15 77.4
MS.gene51189.t1 MTR_3g024040 25.172 290 177 11 15 291 38 300 1.98e-15 77.0
MS.gene51189.t1 MTR_8g101940 27.273 308 173 13 8 287 2 286 2.13e-15 77.0
MS.gene51189.t1 MTR_3g011120 25.568 352 211 13 5 324 11 343 2.70e-15 76.6
MS.gene51189.t1 MTR_1g442850 25.776 322 178 13 7 291 4 301 3.59e-15 76.6
MS.gene51189.t1 MTR_2g426090 25.231 325 199 13 6 299 5 316 3.65e-15 76.6
MS.gene51189.t1 MTR_5g057643 27.602 221 131 8 8 211 46 254 3.78e-15 75.1
MS.gene51189.t1 MTR_5g008530 63.636 55 17 1 5 59 15 66 4.19e-15 70.1
MS.gene51189.t1 MTR_4g122860 32.653 196 88 8 182 365 157 320 4.49e-15 75.9
MS.gene51189.t1 MTR_3g023940 25.743 303 186 12 8 291 34 316 6.21e-15 75.9
MS.gene51189.t1 MTR_2g021210 26.351 296 183 13 8 291 84 356 6.44e-15 75.9
MS.gene51189.t1 MTR_1g015730 24.699 332 175 12 7 296 8 306 7.72e-15 75.5
MS.gene51189.t1 MTR_5g022900 23.209 349 193 12 8 292 32 369 8.45e-15 75.9
MS.gene51189.t1 MTR_2g021252 24.832 298 176 10 11 291 50 316 9.92e-15 75.1
MS.gene51189.t1 MTR_1g029650 24.458 323 207 10 1 296 1 313 1.17e-14 75.1
MS.gene51189.t1 MTR_0760s0010 27.797 295 171 12 13 292 52 319 1.19e-14 75.1
MS.gene51189.t1 MTR_6g004210 27.327 333 184 16 19 309 36 352 1.33e-14 75.1
MS.gene51189.t1 MTR_1g054725 24.756 307 190 15 7 291 19 306 1.49e-14 74.7
MS.gene51189.t1 MTR_2g033410 26.027 292 181 11 8 283 9 281 2.03e-14 73.9
MS.gene51189.t1 MTR_6g048120 25.974 308 187 12 8 291 36 326 2.09e-14 74.3
MS.gene51189.t1 MTR_1g055375 25.083 303 202 11 11 298 7 299 2.22e-14 73.9
MS.gene51189.t1 MTR_2g437110 25.348 359 219 15 6 333 20 360 3.04e-14 74.3
MS.gene51189.t1 MTR_2g066200 23.990 396 243 15 3 358 7 384 3.35e-14 73.6
MS.gene51189.t1 MTR_4g006350 24.069 349 221 14 1 313 487 827 3.47e-14 74.3
MS.gene51189.t1 MTR_1g037540 25.378 331 186 14 15 295 12 331 3.53e-14 73.6
MS.gene51189.t1 MTR_2g021800 23.798 416 245 16 2 358 10 412 4.28e-14 73.6
MS.gene51189.t1 MTR_7g055850 32.057 209 100 8 8 180 13 215 5.62e-14 72.0
MS.gene51189.t1 MTR_3g058470 30.476 210 119 6 8 197 37 239 7.32e-14 72.4
MS.gene51189.t1 MTR_7g079160 26.331 357 194 15 1 296 1 349 8.46e-14 72.8
MS.gene51189.t1 MTR_3g010870 28.829 222 129 9 8 220 37 238 1.01e-13 71.6
MS.gene51189.t1 MTR_2g104340 23.664 393 246 14 7 358 13 392 1.45e-13 71.6
MS.gene51189.t1 MTR_2g010950 24.706 340 188 10 2 296 14 330 1.57e-13 71.6
MS.gene51189.t1 MTR_5g010660 25.914 301 183 12 8 291 34 311 1.64e-13 72.0
MS.gene51189.t1 MTR_7g055830 24.294 354 183 14 1 315 6 313 2.01e-13 71.2
MS.gene51189.t1 MTR_2g031640 25.868 317 187 11 8 298 6 300 2.06e-13 71.2
MS.gene51189.t1 MTR_3g096280 24.675 308 168 13 20 305 17 282 2.59e-13 70.5
MS.gene51189.t1 MTR_2g079810 24.242 297 167 10 6 274 5 271 3.45e-13 69.7
MS.gene51189.t1 MTR_3g009300 27.000 200 128 6 106 296 99 289 3.84e-13 70.1
MS.gene51189.t1 MTR_5g048160 23.476 328 195 12 8 291 4 319 4.80e-13 70.1
MS.gene51189.t1 MTR_7g056737 24.620 329 179 10 6 296 20 317 7.05e-13 69.7
MS.gene51189.t1 MTR_7g050480 24.776 335 171 16 1 291 15 312 8.81e-13 69.3
MS.gene51189.t1 MTR_4g028660 23.325 403 240 19 5 358 13 395 8.85e-13 69.3
MS.gene51189.t1 MTR_4g027450 23.325 403 240 19 5 358 13 395 8.85e-13 69.3
MS.gene51189.t1 MTR_2g425980 24.451 319 191 10 8 291 5 308 9.55e-13 69.3
MS.gene51189.t1 MTR_7g445750 25.588 340 165 15 5 285 20 330 9.82e-13 68.9
MS.gene51189.t1 MTR_2g021770 25.122 410 214 21 16 358 20 403 1.37e-12 68.9
MS.gene51189.t1 MTR_4g028750 24.863 366 212 18 5 324 13 361 1.56e-12 68.6
MS.gene51189.t1 MTR_4g024870 29.911 224 137 10 9 221 45 259 2.46e-12 68.2
MS.gene51189.t1 MTR_1g061330 25.000 256 157 10 8 248 4 239 3.18e-12 67.8
MS.gene51189.t1 MTR_1g071010 25.153 326 192 11 5 296 12 319 3.35e-12 67.4
MS.gene51189.t1 MTR_8g039500 25.429 350 215 14 3 323 7 339 3.70e-12 67.0
MS.gene51189.t1 MTR_7g016930 25.538 325 195 13 3 301 11 314 4.63e-12 66.6
MS.gene51189.t1 MTR_4g006270 25.155 322 177 14 8 305 4 285 5.88e-12 67.0
MS.gene51189.t1 MTR_4g080200 27.165 254 151 10 8 248 3 235 7.79e-12 66.2
MS.gene51189.t1 MTR_1g047490 24.688 320 160 10 6 287 20 296 9.68e-12 65.9
MS.gene51189.t1 MTR_5g022090 25.000 320 155 14 8 292 34 303 1.02e-11 66.2
MS.gene51189.t1 MTR_2g025960 25.207 242 142 10 106 315 5 239 1.24e-11 65.5
MS.gene51189.t1 MTR_6g014720 27.517 298 179 15 8 293 26 298 1.80e-11 65.5
MS.gene51189.t1 MTR_7g066060 23.795 332 196 11 7 298 22 336 2.18e-11 65.5
MS.gene51189.t1 MTR_1g114700 24.430 307 191 12 8 293 29 315 2.35e-11 65.1
MS.gene51189.t1 MTR_2g026010 27.536 207 126 9 106 291 90 293 2.92e-11 64.7
MS.gene51189.t1 MTR_5g069390 24.802 379 233 16 1 334 19 390 3.03e-11 65.1
MS.gene51189.t1 MTR_7g037670 27.273 264 140 11 5 248 20 251 3.21e-11 64.3
MS.gene51189.t1 MTR_3g083660 29.012 162 97 6 130 291 63 206 4.83e-11 63.2
MS.gene51189.t1 MTR_7g061010 25.000 348 165 14 1 296 15 318 5.30e-11 63.9
MS.gene51189.t1 MTR_5g074870 55.814 43 19 0 8 50 82 124 5.45e-11 60.8
MS.gene51189.t1 MTR_5g023570 37.607 117 64 4 7 122 36 144 5.73e-11 60.5
MS.gene51189.t1 MTR_7g056717 25.926 324 181 10 6 296 20 317 7.42e-11 63.5
MS.gene51189.t1 MTR_8g013005 53.226 62 22 2 307 365 2 59 7.65e-11 57.8
MS.gene51189.t1 MTR_3g463170 55.814 43 19 0 8 50 92 134 8.54e-11 60.5
MS.gene51189.t1 MTR_7g056570 25.152 330 174 11 7 296 17 313 8.98e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51189.t1 AT3G06240 28.302 371 205 14 4 327 32 388 3.88e-25 105
MS.gene51189.t1 AT3G23880 28.146 302 185 10 8 293 14 299 1.90e-20 91.7
MS.gene51189.t1 AT4G12560 25.472 318 183 12 8 292 4 300 2.69e-20 92.0
MS.gene51189.t1 AT4G12560 25.472 318 183 12 8 292 4 300 2.69e-20 92.0
MS.gene51189.t1 AT4G12560 25.472 318 183 12 8 292 4 300 2.69e-20 92.0
MS.gene51189.t1 AT1G33530 28.477 302 174 12 5 292 94 367 1.29e-18 87.0
MS.gene51189.t1 AT5G49610 27.184 309 174 11 3 288 4 284 1.66e-18 86.3
MS.gene51189.t1 AT3G22720 23.625 309 203 13 8 297 5 299 4.19e-18 85.1
MS.gene51189.t1 AT4G21240 24.183 306 182 12 8 288 36 316 4.13e-15 76.6
MS.gene51189.t1 AT3G16210 27.451 255 140 11 5 248 2 222 2.25e-14 73.9
MS.gene51189.t1 AT4G22390 24.919 309 188 13 9 291 5 295 4.66e-14 73.2
MS.gene51189.t1 AT4G22390 24.919 309 188 13 9 291 5 295 4.80e-14 73.2
MS.gene51189.t1 AT2G04920 23.922 255 179 7 8 260 4 245 3.07e-13 70.9
MS.gene51189.t1 AT1G11620 25.000 252 161 9 8 248 6 240 6.77e-13 69.7
MS.gene51189.t1 AT3G49980 24.254 268 170 11 8 261 5 253 1.65e-12 68.6
MS.gene51189.t1 AT3G49980 24.254 268 170 11 8 261 6 254 1.80e-12 68.6
MS.gene51189.t1 AT1G47790 22.623 305 199 10 1 291 18 299 2.12e-12 68.2
MS.gene51189.t1 AT5G62660 25.321 312 165 13 8 282 41 321 2.95e-12 67.8
MS.gene51189.t1 AT1G77650 25.620 242 151 8 8 245 6 222 3.14e-12 67.8
MS.gene51189.t1 AT3G17500 24.590 244 164 10 8 248 4 230 1.35e-11 65.9
MS.gene51189.t1 AT3G17500 24.590 244 164 10 8 248 5 231 1.48e-11 65.5
MS.gene51189.t1 AT3G22730 21.311 305 214 8 11 305 9 297 2.03e-11 65.1
MS.gene51189.t1 AT3G22700 25.000 252 162 10 8 248 5 240 2.46e-11 64.7
MS.gene51189.t1 AT4G10190 26.394 269 154 12 1 250 1 244 6.20e-11 63.5
MS.gene51189.t1 AT3G21120 23.954 263 163 9 6 250 1 244 6.20e-11 63.5
MS.gene51189.t1 AT3G17480 23.246 228 144 7 8 224 12 219 9.15e-11 63.2

Find 76 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACAATTTGTAATGCATTT+TGG 0.138811 7.3:+27683278 None:intergenic
TATTATTGCCTTTGATTTAA+AGG 0.191385 7.3:-27683498 MS.gene51189:CDS
AAATCTATGGATAGGGTTTC+AGG 0.201692 7.3:+27683980 None:intergenic
TAAGCTTGTTCAGTGCTATT+AGG 0.207756 7.3:+27683116 None:intergenic
CTGCTTCTGATTTGCCTTAT+AGG 0.209679 7.3:-27683616 MS.gene51189:CDS
AATATGCAGTGCATTCATTT+TGG 0.215670 7.3:-27683346 MS.gene51189:CDS
TGATGATTACATGGTACTTT+TGG 0.216743 7.3:-27683726 MS.gene51189:CDS
CAACTTGATATAATTGTTAT+AGG 0.258105 7.3:+27683778 None:intergenic
AGATGTTTACACTTGTTATA+TGG 0.283340 7.3:-27683379 MS.gene51189:CDS
AATTATGATTTGTTAGTATC+TGG 0.286105 7.3:-27683428 MS.gene51189:CDS
GAGAGATGCATTAAAATCTA+TGG 0.304256 7.3:+27683967 None:intergenic
TCTTGAATGGTTCTATTCAT+TGG 0.308230 7.3:-27683553 MS.gene51189:CDS
AATTATATCAAGTTGCTCTT+TGG 0.312261 7.3:-27683770 MS.gene51189:CDS
GAAAATGTGAAGCTGCAAAA+TGG 0.315280 7.3:+27684065 None:intergenic
GATATAATTGTTATAGGAAT+TGG 0.317461 7.3:+27683784 None:intergenic
ATCAAGTTGCTCTTTGGTTT+CGG 0.318430 7.3:-27683764 MS.gene51189:CDS
GAGCTTGCAGTCTTCCTATA+AGG 0.330567 7.3:+27683602 None:intergenic
ATTCAAGAACGACCCGATTC+TGG 0.344267 7.3:+27683568 None:intergenic
AAGCTTGTTCAGTGCTATTA+GGG 0.349468 7.3:+27683117 None:intergenic
GGAAATTCTGTTGAGGTTGC+CGG 0.351928 7.3:-27684149 MS.gene51189:CDS
CTTCCAGATGATTGTTCTCC+TGG 0.377019 7.3:-27683452 MS.gene51189:CDS
CTCTGTATACACCGCCATTT+GGG 0.377507 7.3:+27683154 None:intergenic
ATTACTGTAATTGAATTTGT+AGG 0.377720 7.3:+27683700 None:intergenic
GAATGGTTCTATTCATTGGC+TGG 0.382596 7.3:-27683549 MS.gene51189:CDS
ACTCTGTATACACCGCCATT+TGG 0.403215 7.3:+27683153 None:intergenic
ATTTCCTTGATCATTTCTTC+AGG 0.415111 7.3:+27684166 None:intergenic
TCTCATTGAAAGCTAATAAG+TGG 0.419822 7.3:-27683652 MS.gene51189:CDS
ACAAATTGTGGTGATATAGT+TGG 0.437990 7.3:-27683266 MS.gene51189:CDS
TAATACTAATTCAATTAACT+TGG 0.438157 7.3:-27683681 MS.gene51189:CDS
TAGGGTTTCAGGATCGTGAT+TGG 0.438307 7.3:+27683991 None:intergenic
AAAATGTGAAGCTGCAAAAT+GGG 0.440027 7.3:+27684066 None:intergenic
TCTGAAGGTGGTCCCAGAAT+CGG 0.447431 7.3:-27683581 MS.gene51189:CDS
CTTACTATTACCTCAGCCTA+TGG 0.449587 7.3:-27683844 MS.gene51189:CDS
TTCAAGAACGACCCGATTCT+GGG 0.453691 7.3:+27683569 None:intergenic
CTGAAGGTGGTCCCAGAATC+GGG 0.456880 7.3:-27683580 MS.gene51189:CDS
TTTCCAGGAGAACAATCATC+TGG 0.467463 7.3:+27683449 None:intergenic
AGGGTTTCAGGATCGTGATT+GGG 0.468583 7.3:+27683992 None:intergenic
CCAAAATGCATTACAAATTG+TGG 0.474239 7.3:-27683278 MS.gene51189:CDS
GATGTTTACACTTGTTATAT+GGG 0.476589 7.3:-27683378 MS.gene51189:CDS
TGTCGCTTCCTTTAAATCAA+AGG 0.482709 7.3:+27683490 None:intergenic
ACTAACAAATCATAATTTCC+AGG 0.485128 7.3:+27683434 None:intergenic
TGCATTAAAATCTATGGATA+GGG 0.487688 7.3:+27683973 None:intergenic
ATGCATTAAAATCTATGGAT+AGG 0.488974 7.3:+27683972 None:intergenic
TTACTTTGTAAGATCCCAAA+TGG 0.499586 7.3:-27683168 MS.gene51189:CDS
CACAAGTCTGTGTGTGGGTG+AGG 0.500024 7.3:+27684033 None:intergenic
GCAAGTGCGTCTGTAAGTTA+TGG 0.503203 7.3:-27684108 MS.gene51189:CDS
AGAATCGGGTCGTTCTTGAA+TGG 0.504558 7.3:-27683566 MS.gene51189:CDS
AGGAAGACTGCAAGCTCTGA+AGG 0.514698 7.3:-27683596 MS.gene51189:CDS
AAAATAGAGGTTCGTGTAGA+GGG 0.515201 7.3:-27683883 MS.gene51189:CDS
CTGCTAGAGCATCGCTCCCA+TGG 0.523254 7.3:-27683197 MS.gene51189:CDS
CCTGTCAAGTGATGATTACA+TGG 0.525640 7.3:-27683735 MS.gene51189:CDS
TAGTTGGACCAAATGATGAT+GGG 0.533292 7.3:-27683250 MS.gene51189:CDS
TCTACCTGAAGAAATGATCA+AGG 0.545203 7.3:-27684170 MS.gene51189:CDS
CCATGTAATCATCACTTGAC+AGG 0.555817 7.3:+27683735 None:intergenic
AGCCTATGGAATCCATCCAC+TGG 0.557108 7.3:-27683830 MS.gene51189:CDS
ATAGTTGGACCAAATGATGA+TGG 0.569039 7.3:-27683251 MS.gene51189:CDS
CAGCGTAGTATAGTCTTCAC+CGG 0.583391 7.3:+27684130 None:intergenic
TGATCAAGGAAATTCTGTTG+AGG 0.604390 7.3:-27684156 MS.gene51189:CDS
TGGATGGATTCCATAGGCTG+AGG 0.613342 7.3:+27683834 None:intergenic
TATTTGTTTGTTGACACCAG+TGG 0.613843 7.3:+27683814 None:intergenic
AGTTGGACCAAATGATGATG+GGG 0.619815 7.3:-27683249 MS.gene51189:CDS
GAAGATCACAAGTCTGTGTG+TGG 0.623004 7.3:+27684027 None:intergenic
TATGATTTGTTAGTATCTGG+CGG 0.623021 7.3:-27683425 MS.gene51189:CDS
TGTTTGTTGACACCAGTGGA+TGG 0.624812 7.3:+27683818 None:intergenic
AAGTCTGTGTGTGGGTGAGG+CGG 0.643149 7.3:+27684036 None:intergenic
CACCAGTGGATGGATTCCAT+AGG 0.651816 7.3:+27683828 None:intergenic
TAATAAGTGGAAACAAGTTG+AGG 0.653574 7.3:-27683639 MS.gene51189:CDS
TACAAAGTAACAGTCACCAT+GGG 0.658002 7.3:+27683181 None:intergenic
GTTGGACCAAATGATGATGG+GGG 0.660132 7.3:-27683248 MS.gene51189:CDS
AAGACTGCAAGCTCTGAAGG+TGG 0.668011 7.3:-27683593 MS.gene51189:CDS
TTAGTGAAGATTAATGACAA+AGG 0.669184 7.3:-27683224 MS.gene51189:CDS
TTACAAAGTAACAGTCACCA+TGG 0.684120 7.3:+27683180 None:intergenic
TTGGACCAAATGATGATGGG+GGG 0.689004 7.3:-27683247 MS.gene51189:CDS
AAGATCACAAGTCTGTGTGT+GGG 0.701472 7.3:+27684028 None:intergenic
CTTTGTAAGATCCCAAATGG+CGG 0.702686 7.3:-27683165 MS.gene51189:CDS
AAATGTGAAGCTGCAAAATG+GGG 0.704231 7.3:+27684067 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATACTAATTCAATTAACT+TGG - chr7.3:27683624-27683643 MS.gene51189:CDS 15.0%
!! ATTACTGTAATTGAATTTGT+AGG + chr7.3:27683608-27683627 None:intergenic 20.0%
!! CAACTTGATATAATTGTTAT+AGG + chr7.3:27683530-27683549 None:intergenic 20.0%
!! GATATAATTGTTATAGGAAT+TGG + chr7.3:27683524-27683543 None:intergenic 20.0%
!!! AATTATGATTTGTTAGTATC+TGG - chr7.3:27683877-27683896 MS.gene51189:CDS 20.0%
!!! TATTATTGCCTTTGATTTAA+AGG - chr7.3:27683807-27683826 MS.gene51189:CDS 20.0%
! ACTAACAAATCATAATTTCC+AGG + chr7.3:27683874-27683893 None:intergenic 25.0%
! ATGCATTAAAATCTATGGAT+AGG + chr7.3:27683336-27683355 None:intergenic 25.0%
! TGCATTAAAATCTATGGATA+GGG + chr7.3:27683335-27683354 None:intergenic 25.0%
! TTAGTGAAGATTAATGACAA+AGG - chr7.3:27684081-27684100 MS.gene51189:CDS 25.0%
!! AATTATATCAAGTTGCTCTT+TGG - chr7.3:27683535-27683554 MS.gene51189:CDS 25.0%
!!! AGATGTTTACACTTGTTATA+TGG - chr7.3:27683926-27683945 MS.gene51189:CDS 25.0%
!!! GATGTTTACACTTGTTATAT+GGG - chr7.3:27683927-27683946 MS.gene51189:CDS 25.0%
!!! TTTTTCTTGTTTTTATGCTC+TGG - chr7.3:27683996-27684015 MS.gene51189:CDS 25.0%
AAAATGTGAAGCTGCAAAAT+GGG + chr7.3:27683242-27683261 None:intergenic 30.0%
ACAAATTGTGGTGATATAGT+TGG - chr7.3:27684039-27684058 MS.gene51189:CDS 30.0%
ATTTCCTTGATCATTTCTTC+AGG + chr7.3:27683142-27683161 None:intergenic 30.0%
CCAAAATGCATTACAAATTG+TGG - chr7.3:27684027-27684046 MS.gene51189:CDS 30.0%
GAGAGATGCATTAAAATCTA+TGG + chr7.3:27683341-27683360 None:intergenic 30.0%
GGATCTTATCCTAAAAATAG+AGG - chr7.3:27683409-27683428 MS.gene51189:CDS 30.0%
TAATAAGTGGAAACAAGTTG+AGG - chr7.3:27683666-27683685 MS.gene51189:CDS 30.0%
TCTCATTGAAAGCTAATAAG+TGG - chr7.3:27683653-27683672 MS.gene51189:CDS 30.0%
TTACTTTGTAAGATCCCAAA+TGG - chr7.3:27684137-27684156 MS.gene51189:CDS 30.0%
! AATATGCAGTGCATTCATTT+TGG - chr7.3:27683959-27683978 MS.gene51189:CDS 30.0%
! ATGATTACATGGTACTTTTG+GGG - chr7.3:27683581-27683600 MS.gene51189:CDS 30.0%
! CCACAATTTGTAATGCATTT+TGG + chr7.3:27684030-27684049 None:intergenic 30.0%
! CTGGTTTATAATTTTGTGAC+TGG - chr7.3:27683775-27683794 MS.gene51189:CDS 30.0%
! GATGATTACATGGTACTTTT+GGG - chr7.3:27683580-27683599 MS.gene51189:CDS 30.0%
! TCTTGAATGGTTCTATTCAT+TGG - chr7.3:27683752-27683771 MS.gene51189:CDS 30.0%
! TGATGATTACATGGTACTTT+TGG - chr7.3:27683579-27683598 MS.gene51189:CDS 30.0%
!! TATGATTTGTTAGTATCTGG+CGG - chr7.3:27683880-27683899 MS.gene51189:CDS 30.0%
AAAAATAGAGGTTCGTGTAG+AGG - chr7.3:27683421-27683440 MS.gene51189:CDS 35.0%
AAAATAGAGGTTCGTGTAGA+GGG - chr7.3:27683422-27683441 MS.gene51189:CDS 35.0%
AAATCTATGGATAGGGTTTC+AGG + chr7.3:27683328-27683347 None:intergenic 35.0%
AAATGTGAAGCTGCAAAATG+GGG + chr7.3:27683241-27683260 None:intergenic 35.0%
ATAGTTGGACCAAATGATGA+TGG - chr7.3:27684054-27684073 MS.gene51189:CDS 35.0%
GAAAATGTGAAGCTGCAAAA+TGG + chr7.3:27683243-27683262 None:intergenic 35.0%
TACAAAGTAACAGTCACCAT+GGG + chr7.3:27684127-27684146 None:intergenic 35.0%
TAGTTGGACCAAATGATGAT+GGG - chr7.3:27684055-27684074 MS.gene51189:CDS 35.0%
TCTACCTGAAGAAATGATCA+AGG - chr7.3:27683135-27683154 MS.gene51189:CDS 35.0%
TGATCAAGGAAATTCTGTTG+AGG - chr7.3:27683149-27683168 MS.gene51189:CDS 35.0%
TTACAAAGTAACAGTCACCA+TGG + chr7.3:27684128-27684147 None:intergenic 35.0%
! AAGCTTGTTCAGTGCTATTA+GGG + chr7.3:27684191-27684210 None:intergenic 35.0%
! ATCAAGTTGCTCTTTGGTTT+CGG - chr7.3:27683541-27683560 MS.gene51189:CDS 35.0%
! TAAGCTTGTTCAGTGCTATT+AGG + chr7.3:27684192-27684211 None:intergenic 35.0%
! TATTTGTTTGTTGACACCAG+TGG + chr7.3:27683494-27683513 None:intergenic 35.0%
! TGTCGCTTCCTTTAAATCAA+AGG + chr7.3:27683818-27683837 None:intergenic 35.0%
!! CTACACGAACCTCTATTTTT+AGG + chr7.3:27683421-27683440 None:intergenic 35.0%
AAGATCACAAGTCTGTGTGT+GGG + chr7.3:27683280-27683299 None:intergenic 40.0%
ATCCGTGAAGCAAAAAAGCA+AGG + chr7.3:27683393-27683412 None:intergenic 40.0%
CCATGTAATCATCACTTGAC+AGG + chr7.3:27683573-27683592 None:intergenic 40.0%
CCTGTCAAGTGATGATTACA+TGG - chr7.3:27683570-27683589 MS.gene51189:CDS 40.0%
CTTACTATTACCTCAGCCTA+TGG - chr7.3:27683461-27683480 MS.gene51189:CDS 40.0%
CTTTGTAAGATCCCAAATGG+CGG - chr7.3:27684140-27684159 MS.gene51189:CDS 40.0%
TTTCCAGGAGAACAATCATC+TGG + chr7.3:27683859-27683878 None:intergenic 40.0%
! AGTTGGACCAAATGATGATG+GGG - chr7.3:27684056-27684075 MS.gene51189:CDS 40.0%
! CTGCTTCTGATTTGCCTTAT+AGG - chr7.3:27683689-27683708 MS.gene51189:CDS 40.0%
! GAATGGTTCTATTCATTGGC+TGG - chr7.3:27683756-27683775 MS.gene51189:CDS 40.0%
!!! AGCCTTGCTTTTTTGCTTCA+CGG - chr7.3:27683388-27683407 MS.gene51189:CDS 40.0%
ACTAACCCCCCATCATCATT+TGG + chr7.3:27684066-27684085 None:intergenic 45.0%
ACTCTGTATACACCGCCATT+TGG + chr7.3:27684155-27684174 None:intergenic 45.0%
AGAATCGGGTCGTTCTTGAA+TGG - chr7.3:27683739-27683758 MS.gene51189:CDS 45.0%
AGGGTTTCAGGATCGTGATT+GGG + chr7.3:27683316-27683335 None:intergenic 45.0%
ATTCAAGAACGACCCGATTC+TGG + chr7.3:27683740-27683759 None:intergenic 45.0%
CAGCGTAGTATAGTCTTCAC+CGG + chr7.3:27683178-27683197 None:intergenic 45.0%
CTCTGTATACACCGCCATTT+GGG + chr7.3:27684154-27684173 None:intergenic 45.0%
CTTCCAGATGATTGTTCTCC+TGG - chr7.3:27683853-27683872 MS.gene51189:CDS 45.0%
GAAGATCACAAGTCTGTGTG+TGG + chr7.3:27683281-27683300 None:intergenic 45.0%
GAGCTTGCAGTCTTCCTATA+AGG + chr7.3:27683706-27683725 None:intergenic 45.0%
GCAAGTGCGTCTGTAAGTTA+TGG - chr7.3:27683197-27683216 MS.gene51189:CDS 45.0%
GGAAATTCTGTTGAGGTTGC+CGG - chr7.3:27683156-27683175 MS.gene51189:CDS 45.0%
TAGGGTTTCAGGATCGTGAT+TGG + chr7.3:27683317-27683336 None:intergenic 45.0%
TTCAAGAACGACCCGATTCT+GGG + chr7.3:27683739-27683758 None:intergenic 45.0%
! TGTTTGTTGACACCAGTGGA+TGG + chr7.3:27683490-27683509 None:intergenic 45.0%
!! GTTGGACCAAATGATGATGG+GGG - chr7.3:27684057-27684076 MS.gene51189:CDS 45.0%
!! TTGGACCAAATGATGATGGG+GGG - chr7.3:27684058-27684077 MS.gene51189:CDS 45.0%
AGCCTATGGAATCCATCCAC+TGG - chr7.3:27683475-27683494 MS.gene51189:CDS 50.0%
TCTGAAGGTGGTCCCAGAAT+CGG - chr7.3:27683724-27683743 MS.gene51189:CDS 50.0%
! AGGAAGACTGCAAGCTCTGA+AGG - chr7.3:27683709-27683728 MS.gene51189:CDS 50.0%
! CACCAGTGGATGGATTCCAT+AGG + chr7.3:27683480-27683499 None:intergenic 50.0%
! TGGATGGATTCCATAGGCTG+AGG + chr7.3:27683474-27683493 None:intergenic 50.0%
!! AAGACTGCAAGCTCTGAAGG+TGG - chr7.3:27683712-27683731 MS.gene51189:CDS 50.0%
AAGTCTGTGTGTGGGTGAGG+CGG + chr7.3:27683272-27683291 None:intergenic 55.0%
CACAAGTCTGTGTGTGGGTG+AGG + chr7.3:27683275-27683294 None:intergenic 55.0%
CTGAAGGTGGTCCCAGAATC+GGG - chr7.3:27683725-27683744 MS.gene51189:CDS 55.0%
!! CTGCTAGAGCATCGCTCCCA+TGG - chr7.3:27684108-27684127 MS.gene51189:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 27683115 27684212 27683115 ID=MS.gene51189
chr7.3 mRNA 27683115 27684212 27683115 ID=MS.gene51189.t1;Parent=MS.gene51189
chr7.3 exon 27683115 27684212 27683115 ID=MS.gene51189.t1.exon1;Parent=MS.gene51189.t1
chr7.3 CDS 27683115 27684212 27683115 ID=cds.MS.gene51189.t1;Parent=MS.gene51189.t1
Gene Sequence

>MS.gene51189

ATGGCGAAGAAGAGTGTGTATCTACCTGAAGAAATGATCAAGGAAATTCTGTTGAGGTTGCCGGTGAAGACTATACTACGCTGCAAGTGCGTCTGTAAGTTATGGCTTTCTCTTATATCTGATCCCCATTTTGCAGCTTCACATTTTCAGCTTGCCGCCTCACCCACACACAGACTTGTGATCTTCAAAGATTTTCATCCCAATCACGATCCTGAAACCCTATCCATAGATTTTAATGCATCTCTCTATGATCATTCTGCTTATCATTCACTAAGCCTTGCTTTTTTGCTTCACGGATCTTATCCTAAAAATAGAGGTTCGTGTAGAGGGTTTCTATTATTAGACTCTTACTATTACCTCAGCCTATGGAATCCATCCACTGGTGTCAACAAACAAATACTTGTGTCCAATTCCTATAACAATTATATCAAGTTGCTCTTTGGTTTCGGATACGACCTGTCAAGTGATGATTACATGGTACTTTTGGGGTCCTACAAATTCAATTACAGTAATACTAATTCAATTAACTTGGATATTTTCTCATTGAAAGCTAATAAGTGGAAACAAGTTGAGGCTGCTTCTGATTTGCCTTATAGGAAGACTGCAAGCTCTGAAGGTGGTCCCAGAATCGGGTCGTTCTTGAATGGTTCTATTCATTGGCTGGTTTATAATTTTGTGACTGGAAAAGATGTTATTATTGCCTTTGATTTAAAGGAAGCGACAATGTCAGAGATAGCTCTTCCAGATGATTGTTCTCCTGGAAATTATGATTTGTTAGTATCTGGCGGACTTATCAGTGTATGTGATGTGCAGATGTTTACACTTGTTATATGGGTGATGCAAGAATATGCAGTGCATTCATTTTGGACTAAGACTCTTGATTTTTCTTGTTTTTATGCTCTGGATTTTTCTCCAAAATGCATTACAAATTGTGGTGATATAGTTGGACCAAATGATGATGGGGGGTTAGTGAAGATTAATGACAAAGGACAGCTGCTAGAGCATCGCTCCCATGGTGACTGTTACTTTGTAAGATCCCAAATGGCGGTGTATACAGAGTGTCTGCTTTCACTCCCTAATAGCACTGAACAAGCTTAA

Protein sequence

>MS.gene51189.t1

MAKKSVYLPEEMIKEILLRLPVKTILRCKCVCKLWLSLISDPHFAASHFQLAASPTHRLVIFKDFHPNHDPETLSIDFNASLYDHSAYHSLSLAFLLHGSYPKNRGSCRGFLLLDSYYYLSLWNPSTGVNKQILVSNSYNNYIKLLFGFGYDLSSDDYMVLLGSYKFNYSNTNSINLDIFSLKANKWKQVEAASDLPYRKTASSEGGPRIGSFLNGSIHWLVYNFVTGKDVIIAFDLKEATMSEIALPDDCSPGNYDLLVSGGLISVCDVQMFTLVIWVMQEYAVHSFWTKTLDFSCFYALDFSPKCITNCGDIVGPNDDGGLVKINDKGQLLEHRSHGDCYFVRSQMAVYTECLLSLPNSTEQA