Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81466.t1 | XP_003630507.1 | 73.3 | 457 | 87 | 3 | 29 | 450 | 73 | 529 | 1.50E-180 | 642.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81466.t1 | G7LHC0 | 73.3 | 457 | 87 | 3 | 29 | 450 | 73 | 529 | 1.1e-180 | 642.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene81466 | 0.856579 | 2.92E-62 | -1.69E-46 |
| MS.gene049404 | MS.gene81466 | 0.812698 | 3.72E-51 | -1.69E-46 |
| MS.gene049977 | MS.gene81466 | 0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene050026 | MS.gene81466 | 0.809108 | 2.23E-50 | -1.69E-46 |
| MS.gene050237 | MS.gene81466 | 0.839115 | 1.92E-57 | -1.69E-46 |
| MS.gene050559 | MS.gene81466 | 0.804543 | 2.05E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene81466 | 0.801956 | 7.05E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene81466 | 0.81618 | 6.32E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene81466 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene81466 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene81466 | 0.834715 | 2.55E-56 | -1.69E-46 |
| MS.gene051594 | MS.gene81466 | 0.82752 | 1.50E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene81466 | 0.831494 | 1.62E-55 | -1.69E-46 |
| MS.gene052037 | MS.gene81466 | 0.823278 | 1.51E-53 | -1.69E-46 |
| MS.gene052239 | MS.gene81466 | -0.829124 | 6.13E-55 | -1.69E-46 |
| MS.gene052447 | MS.gene81466 | 0.862389 | 5.25E-64 | -1.69E-46 |
| MS.gene052519 | MS.gene81466 | 0.812768 | 3.59E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene81466 | 0.815285 | 1.00E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene81466 | 0.814209 | 1.73E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene81466 | 0.802618 | 5.15E-49 | -1.69E-46 |
| MS.gene053082 | MS.gene81466 | 0.804701 | 1.90E-49 | -1.69E-46 |
| MS.gene053085 | MS.gene81466 | 0.800701 | 1.27E-48 | -1.69E-46 |
| MS.gene053166 | MS.gene81466 | 0.800017 | 1.76E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene81466 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene81466 | 0.804697 | 1.91E-49 | -1.69E-46 |
| MS.gene05329 | MS.gene81466 | 0.821798 | 3.33E-53 | -1.69E-46 |
| MS.gene053883 | MS.gene81466 | 0.806544 | 7.81E-50 | -1.69E-46 |
| MS.gene053998 | MS.gene81466 | 0.807297 | 5.42E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene81466 | 0.813008 | 3.18E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene81466 | 0.878241 | 3.29E-69 | -1.69E-46 |
| MS.gene05423 | MS.gene81466 | 0.840574 | 8.01E-58 | -1.69E-46 |
| MS.gene054291 | MS.gene81466 | -0.818801 | 1.62E-52 | -1.69E-46 |
| MS.gene054576 | MS.gene81466 | 0.804707 | 1.90E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene81466 | 0.831177 | 1.93E-55 | -1.69E-46 |
| MS.gene054991 | MS.gene81466 | 0.80536 | 1.39E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene81466 | 0.811049 | 8.50E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene81466 | 0.825172 | 5.42E-54 | -1.69E-46 |
| MS.gene056050 | MS.gene81466 | 0.810793 | 9.66E-51 | -1.69E-46 |
| MS.gene056162 | MS.gene81466 | 0.818138 | 2.29E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene81466 | 0.83069 | 2.55E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene81466 | 0.81683 | 4.52E-52 | -1.69E-46 |
| MS.gene056859 | MS.gene81466 | 0.81215 | 4.90E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene81466 | 0.806231 | 9.10E-50 | -1.69E-46 |
| MS.gene05690 | MS.gene81466 | 0.810713 | 1.01E-50 | -1.69E-46 |
| MS.gene057021 | MS.gene81466 | 0.814886 | 1.23E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene81466 | 0.80897 | 2.38E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene81466 | 0.825352 | 4.91E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene81466 | 0.8254 | 4.79E-54 | -1.69E-46 |
| MS.gene057598 | MS.gene81466 | 0.810064 | 1.39E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene81466 | 0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene058294 | MS.gene81466 | 0.846369 | 2.27E-59 | -1.69E-46 |
| MS.gene058625 | MS.gene81466 | 0.803528 | 3.34E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene81466 | 0.848074 | 7.73E-60 | -1.69E-46 |
| MS.gene059015 | MS.gene81466 | 0.807953 | 3.93E-50 | -1.69E-46 |
| MS.gene059584 | MS.gene81466 | 0.813827 | 2.10E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene81466 | 0.808468 | 3.05E-50 | -1.69E-46 |
| MS.gene060348 | MS.gene81466 | 0.80585 | 1.09E-49 | -1.69E-46 |
| MS.gene060353 | MS.gene81466 | 0.802482 | 5.49E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene81466 | 0.839755 | 1.31E-57 | -1.69E-46 |
| MS.gene060521 | MS.gene81466 | 0.808132 | 3.60E-50 | -1.69E-46 |
| MS.gene060918 | MS.gene81466 | 0.822497 | 2.30E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81466.t1 | MTR_8g098290 | 76.087 | 460 | 75 | 3 | 26 | 450 | 70 | 529 | 0.0 | 701 |
| MS.gene81466.t1 | MTR_8g098290 | 80.392 | 357 | 63 | 2 | 26 | 375 | 70 | 426 | 0.0 | 582 |
| MS.gene81466.t1 | MTR_8g098260 | 63.834 | 459 | 132 | 2 | 26 | 450 | 48 | 506 | 0.0 | 543 |
| MS.gene81466.t1 | MTR_5g010190 | 57.356 | 469 | 164 | 4 | 18 | 450 | 59 | 527 | 0.0 | 526 |
| MS.gene81466.t1 | MTR_5g010190 | 60.440 | 364 | 136 | 3 | 18 | 373 | 59 | 422 | 9.05e-150 | 434 |
| MS.gene81466.t1 | MTR_6g464540 | 52.464 | 345 | 96 | 6 | 29 | 373 | 50 | 326 | 6.05e-105 | 316 |
| MS.gene81466.t1 | MTR_6g007787 | 35.537 | 121 | 75 | 2 | 76 | 196 | 59 | 176 | 1.15e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81466.t1 | AT4G11560 | 50.893 | 448 | 181 | 3 | 27 | 444 | 99 | 537 | 1.63e-150 | 441 |
| MS.gene81466.t1 | AT4G11560 | 49.875 | 399 | 161 | 3 | 27 | 395 | 99 | 488 | 1.19e-125 | 374 |
| MS.gene81466.t1 | AT2G25120 | 40.000 | 370 | 159 | 6 | 8 | 376 | 49 | 356 | 1.09e-67 | 221 |
| MS.gene81466.t1 | AT4G23120 | 40.934 | 364 | 158 | 11 | 29 | 389 | 29 | 338 | 8.99e-67 | 218 |
| MS.gene81466.t1 | AT3G43990 | 44.660 | 206 | 102 | 2 | 19 | 212 | 33 | 238 | 2.74e-49 | 172 |
| MS.gene81466.t1 | AT3G48060 | 40.496 | 121 | 69 | 2 | 76 | 196 | 67 | 184 | 1.23e-21 | 99.0 |
| MS.gene81466.t1 | AT3G48060 | 40.496 | 121 | 69 | 2 | 76 | 196 | 67 | 184 | 1.23e-21 | 99.0 |
| MS.gene81466.t1 | AT3G48050 | 40.496 | 121 | 69 | 2 | 76 | 196 | 67 | 184 | 1.25e-21 | 99.0 |
| MS.gene81466.t1 | AT3G48050 | 40.496 | 121 | 69 | 2 | 76 | 196 | 67 | 184 | 1.25e-21 | 99.0 |
| MS.gene81466.t1 | AT3G48060 | 40.496 | 121 | 69 | 2 | 76 | 196 | 68 | 185 | 1.32e-21 | 99.0 |
Find 91 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGAACCTGTTAGGGTTTC+CGG | 0.161064 | 6.4:-20428578 | MS.gene81466:CDS |
| TGATCATCAAGCTTCCATTT+TGG | 0.220360 | 6.4:+20427375 | None:intergenic |
| GCATTGCTTGTGGTTCTTCC+TGG | 0.237514 | 6.4:-20424379 | MS.gene81466:CDS |
| GCTAACTGATAAGGACTATA+TGG | 0.240594 | 6.4:-20427114 | MS.gene81466:CDS |
| GCACAATTCCCTAGTGTTAC+TGG | 0.273535 | 6.4:+20426906 | None:intergenic |
| GAAGGCATTAACATTAGTTT+AGG | 0.291382 | 6.4:-20426708 | MS.gene81466:CDS |
| AACCCATTGGTGAACCTGTT+AGG | 0.325935 | 6.4:-20428586 | MS.gene81466:CDS |
| AATCTGATGCATCTAATGTT+AGG | 0.343197 | 6.4:+20424330 | None:intergenic |
| GGTTCATCGGTCTCGATATC+AGG | 0.370055 | 6.4:+20427029 | None:intergenic |
| ACACAAATGAATTGAAACTA+TGG | 0.372228 | 6.4:-20427139 | MS.gene81466:CDS |
| CTGCATGTGTCGTGGCTCAT+CGG | 0.372955 | 6.4:+20424683 | None:intergenic |
| GACATCACACTATCCCAAAA+TGG | 0.378411 | 6.4:-20427389 | MS.gene81466:CDS |
| CGATCAGGAAGGTCTGATTA+AGG | 0.380889 | 6.4:-20427000 | MS.gene81466:CDS |
| ATCTGGAAGTTGTTTGTGTA+TGG | 0.394843 | 6.4:+20427202 | None:intergenic |
| TTCTCCAGAGAAACTACAAC+TGG | 0.400172 | 6.4:+20426475 | None:intergenic |
| CCTGTTAGGGTTTCCGGAAA+AGG | 0.401434 | 6.4:-20428572 | MS.gene81466:CDS |
| TTAACGTATTAACCATATAT+CGG | 0.408741 | 6.4:+20424490 | None:intergenic |
| TCGAAATAGTCTCCATTCTC+TGG | 0.411878 | 6.4:-20426931 | MS.gene81466:CDS |
| CCGGGATGTTGCTTGCGATC+TGG | 0.413361 | 6.4:+20427185 | None:intergenic |
| TGTCCCAGTTGTAGTTTCTC+TGG | 0.418397 | 6.4:-20426479 | MS.gene81466:CDS |
| ACCCATTGGTGAACCTGTTA+GGG | 0.418504 | 6.4:-20428585 | MS.gene81466:CDS |
| ACTTTGTCTTTAGATTCATT+TGG | 0.419159 | 6.4:+20426681 | None:intergenic |
| TTCTTCGTCTTCTTCTTCAC+TGG | 0.423272 | 6.4:+20428628 | None:intergenic |
| TGCATGTGTCGTGGCTCATC+GGG | 0.431417 | 6.4:+20424684 | None:intergenic |
| GTCAAGTGATGAGGTGGAGA+AGG | 0.432345 | 6.4:-20428669 | MS.gene81466:CDS |
| TTTCAGTCCTTCGATCTCCT+TGG | 0.441799 | 6.4:-20428530 | MS.gene81466:CDS |
| AGGACATGCTAACCGATATA+TGG | 0.442148 | 6.4:-20424502 | MS.gene81466:intron |
| GGTGGAGAAGGAGGAAGATA+AGG | 0.450558 | 6.4:-20428657 | MS.gene81466:CDS |
| CGCATCACAAGAGGCAAACC+AGG | 0.451251 | 6.4:+20424361 | None:intergenic |
| CTCATTCTTTGATATTTCCT+CGG | 0.456129 | 6.4:+20424707 | None:intergenic |
| AAGTGATGAGGTGGAGAAGG+AGG | 0.456735 | 6.4:-20428666 | MS.gene81466:CDS |
| ACCCTAACAGGTTCACCAAT+GGG | 0.460362 | 6.4:+20428584 | None:intergenic |
| GTGTTACTGGTTCCAGAGAA+TGG | 0.464490 | 6.4:+20426919 | None:intergenic |
| CTAACTGATAAGGACTATAT+GGG | 0.471847 | 6.4:-20427113 | MS.gene81466:CDS |
| CGATGAACCTGCTACCGATC+AGG | 0.478725 | 6.4:-20427015 | MS.gene81466:CDS |
| ACCTTGATAATTGCAACATA+CGG | 0.483692 | 6.4:+20428286 | None:intergenic |
| ACCTCAGGCAAAAGAAGCAC+AGG | 0.490058 | 6.4:+20428322 | None:intergenic |
| ATTCTGCAGGAACTTCATCT+TGG | 0.491335 | 6.4:+20427258 | None:intergenic |
| CACTTTCTGCACAATAAACC+CGG | 0.493449 | 6.4:+20427166 | None:intergenic |
| ACTATGGAAGCTAACTGATA+AGG | 0.493553 | 6.4:-20427123 | MS.gene81466:CDS |
| CTGCAGGAACTTCATCTTGG+TGG | 0.495652 | 6.4:+20427261 | None:intergenic |
| ATTCATATACGAGTGTGTAT+TGG | 0.501448 | 6.4:+20428504 | None:intergenic |
| AATGGAAGCTTGATGATCAC+AGG | 0.509765 | 6.4:-20427371 | MS.gene81466:CDS |
| CCAGATCGCAAGCAACATCC+CGG | 0.512299 | 6.4:-20427185 | MS.gene81466:CDS |
| GATAGGAGAAACTTAAAGAA+TGG | 0.512473 | 6.4:-20426978 | MS.gene81466:CDS |
| CCAGCAAAATGTTGGCGTGA+TGG | 0.517488 | 6.4:-20424538 | MS.gene81466:CDS |
| GCCGTATGTTGCAATTATCA+AGG | 0.523913 | 6.4:-20428287 | MS.gene81466:intron |
| CAGCTGGAATGCATTGCTTG+TGG | 0.524148 | 6.4:-20424389 | MS.gene81466:CDS |
| ACAGTTGGTATTTAATCTCA+AGG | 0.524514 | 6.4:-20426398 | MS.gene81466:intron |
| AGACCTTCCTGATCGGTAGC+AGG | 0.527053 | 6.4:+20427008 | None:intergenic |
| TACAACTGGGACAGCAACAT+CGG | 0.533867 | 6.4:+20426489 | None:intergenic |
| TCTGATACTATCAACAATGA+AGG | 0.536338 | 6.4:-20426726 | MS.gene81466:CDS |
| GATGAAGTCAAGTGATGAGG+TGG | 0.538362 | 6.4:-20428675 | MS.gene81466:CDS |
| ATTTGCAACCAGCAAAATGT+TGG | 0.538533 | 6.4:-20424546 | MS.gene81466:CDS |
| CTGGTTTGCCTCTTGTGATG+CGG | 0.539664 | 6.4:-20424360 | MS.gene81466:CDS |
| ACAACTGGGACAGCAACATC+GGG | 0.541960 | 6.4:+20426490 | None:intergenic |
| CGATGAGCCACGACACATGC+AGG | 0.547085 | 6.4:-20424682 | MS.gene81466:intron |
| GTTGAAGAAGCTAAACCCAT+TGG | 0.559350 | 6.4:-20428599 | MS.gene81466:CDS |
| CGACAAACCCTTGTCACGAT+GGG | 0.562197 | 6.4:+20426824 | None:intergenic |
| CAGATCGCAAGCAACATCCC+GGG | 0.566010 | 6.4:-20427184 | MS.gene81466:CDS |
| ATCGGGCCAGACAAAAGACT+TGG | 0.569970 | 6.4:+20426507 | None:intergenic |
| TAAAATTCACTAATATGCGA+TGG | 0.571172 | 6.4:+20426865 | None:intergenic |
| CTGATCGGTAGCAGGTTCAT+CGG | 0.574816 | 6.4:+20427016 | None:intergenic |
| AGGAAGGTCTGATTAAGGAT+AGG | 0.574826 | 6.4:-20426995 | MS.gene81466:CDS |
| GCTTGATGATCACAGGGCAG+TGG | 0.574881 | 6.4:-20427364 | MS.gene81466:CDS |
| TCTGGAAGTTGTTTGTGTAT+GGG | 0.578493 | 6.4:+20427203 | None:intergenic |
| AACCCTAACAGGTTCACCAA+TGG | 0.581846 | 6.4:+20428583 | None:intergenic |
| CGAGTGTGTATTGGTCTCCA+AGG | 0.587230 | 6.4:+20428513 | None:intergenic |
| CTTAATCAGACCTTCCTGAT+CGG | 0.591796 | 6.4:+20427001 | None:intergenic |
| AGGAGATACCCATCGTGACA+AGG | 0.593342 | 6.4:-20426832 | MS.gene81466:CDS |
| TTATGCATAACAGATTCTGC+AGG | 0.595610 | 6.4:+20427245 | None:intergenic |
| TCTCTGGAACCAGTAACACT+AGG | 0.596217 | 6.4:-20426915 | MS.gene81466:CDS |
| CAAACAAAAGCTACGACAGT+TGG | 0.596612 | 6.4:-20426413 | MS.gene81466:CDS |
| CTCTGGAACCAGTAACACTA+GGG | 0.598631 | 6.4:-20426914 | MS.gene81466:CDS |
| GTGATGGATATTATCTGTGC+AGG | 0.602192 | 6.4:-20424522 | MS.gene81466:CDS |
| AAAGATGAAGTCAAGTGATG+AGG | 0.604858 | 6.4:-20428678 | None:intergenic |
| ATCTAAAGACAAAGTTCCGA+AGG | 0.608846 | 6.4:-20426673 | MS.gene81466:intron |
| TAATATGCGATGGTGCTCAA+AGG | 0.610864 | 6.4:+20426875 | None:intergenic |
| TCGACAAACCCTTGTCACGA+TGG | 0.616965 | 6.4:+20426823 | None:intergenic |
| CAAGGAGGGTTTGACTGCCG+AGG | 0.633599 | 6.4:-20424724 | MS.gene81466:intron |
| TTGGTCTCCAAGGAGATCGA+AGG | 0.643471 | 6.4:+20428523 | None:intergenic |
| CATTGTTGATAGTATCAGAA+CGG | 0.648101 | 6.4:+20426730 | None:intergenic |
| GACAGACACCGCATCACAAG+AGG | 0.650846 | 6.4:+20424352 | None:intergenic |
| GGAGATACCCATCGTGACAA+GGG | 0.650994 | 6.4:-20426831 | MS.gene81466:CDS |
| ATCTGTTATGCATAAATGTG+TGG | 0.655343 | 6.4:-20427237 | MS.gene81466:CDS |
| ATGGAAGCTTGATGATCACA+GGG | 0.656842 | 6.4:-20427370 | MS.gene81466:CDS |
| ACTTTCTGCACAATAAACCC+GGG | 0.664396 | 6.4:+20427167 | None:intergenic |
| CCTCAGGCAAAAGAAGCACA+GGG | 0.680303 | 6.4:+20428323 | None:intergenic |
| ACAGTGACCTGCATGTGTCG+TGG | 0.684218 | 6.4:+20424675 | None:intergenic |
| GAACCTGCTACCGATCAGGA+AGG | 0.704604 | 6.4:-20427011 | MS.gene81466:CDS |
| TCTCCAGAGAAACTACAACT+GGG | 0.710558 | 6.4:+20426476 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAGATTAGAAATA+TGG | + | chr6.4:20427403-20427422 | None:intergenic | 10.0% |
| !! | TATATTATATGTTTAATTGT+GGG | - | chr6.4:20428364-20428383 | MS.gene81466:intron | 10.0% |
| !! | TTATATTATATGTTTAATTG+TGG | - | chr6.4:20428363-20428382 | MS.gene81466:intron | 10.0% |
| !! | AAAATTAAAAAAGACAAATG+TGG | - | chr6.4:20426240-20426259 | MS.gene81466:intron | 15.0% |
| !! | AAATATGTTGAAAATGATAA+AGG | + | chr6.4:20427553-20427572 | None:intergenic | 15.0% |
| !! | AACATATAATATAAGAATGT+CGG | + | chr6.4:20428357-20428376 | None:intergenic | 15.0% |
| !! | CTTATTAAAAAATGATTATG+AGG | - | chr6.4:20426786-20426805 | MS.gene81466:CDS | 15.0% |
| !! | GATAAATTATTAGTGTATAA+AGG | - | chr6.4:20424905-20424924 | MS.gene81466:intron | 15.0% |
| !! | TATTATTAGTAGATTTAACA+AGG | + | chr6.4:20424741-20424760 | None:intergenic | 15.0% |
| !! | TGTTATAAACATATAATGAT+AGG | - | chr6.4:20425526-20425545 | MS.gene81466:intron | 15.0% |
| !! | TTATAAAATGATTTAAGTGT+TGG | - | chr6.4:20428040-20428059 | MS.gene81466:intron | 15.0% |
| !!! | TGTGTAATTTTTAATTATCA+TGG | + | chr6.4:20425269-20425288 | None:intergenic | 15.0% |
| !!! | TTTTTTAATTTTTCTCTCAT+CGG | + | chr6.4:20426232-20426251 | None:intergenic | 15.0% |
| !! | AAAAGTTTAAGAACTGAATT+TGG | + | chr6.4:20424585-20424604 | None:intergenic | 20.0% |
| !! | ACATATAATATAAGAATGTC+GGG | + | chr6.4:20428356-20428375 | None:intergenic | 20.0% |
| !! | AGATTAATCTCTGATAAAAT+GGG | - | chr6.4:20426809-20426828 | MS.gene81466:CDS | 20.0% |
| !! | ATGTACAAATTATCAACAAA+GGG | + | chr6.4:20424833-20424852 | None:intergenic | 20.0% |
| !! | ATTGCTTAGTAACATAAATA+GGG | + | chr6.4:20427779-20427798 | None:intergenic | 20.0% |
| !! | TATATAACAACTCGAAAATT+TGG | + | chr6.4:20425468-20425487 | None:intergenic | 20.0% |
| !! | TTAACGTATTAACCATATAT+CGG | + | chr6.4:20428509-20428528 | None:intergenic | 20.0% |
| !! | TTATTGAATATTTGAACTCA+AGG | - | chr6.4:20428254-20428273 | MS.gene81466:intron | 20.0% |
| !!! | AACACATTCTAAGAAAAAAT+TGG | - | chr6.4:20427671-20427690 | MS.gene81466:intron | 20.0% |
| !!! | ACTACATTTGATTTTGAATA+AGG | - | chr6.4:20426706-20426725 | MS.gene81466:CDS | 20.0% |
| !!! | CTATAACTTATTGTTATTCT+TGG | - | chr6.4:20424624-20424643 | MS.gene81466:intron | 20.0% |
| !!! | TTAACTAAGAACAATTTTCA+AGG | + | chr6.4:20427206-20427225 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCTTGTATTTTCA+TGG | - | chr6.4:20427828-20427847 | MS.gene81466:intron | 20.0% |
| ! | AAATTAATAGCGTAATTGAC+AGG | + | chr6.4:20427477-20427496 | None:intergenic | 25.0% |
| ! | AAATTGTTAGATCAAACGTA+TGG | + | chr6.4:20427810-20427829 | None:intergenic | 25.0% |
| ! | AATTAATAGCGTAATTGACA+GGG | + | chr6.4:20427476-20427495 | None:intergenic | 25.0% |
| ! | ACACAAATGAATTGAAACTA+TGG | - | chr6.4:20425857-20425876 | MS.gene81466:intron | 25.0% |
| ! | ACTTTGTCTTTAGATTCATT+TGG | + | chr6.4:20426318-20426337 | None:intergenic | 25.0% |
| ! | ATCAGAAAATAGAAAAGAGA+AGG | + | chr6.4:20425563-20425582 | None:intergenic | 25.0% |
| ! | ATCATAAGTTAAAAACCTCA+AGG | + | chr6.4:20426434-20426453 | None:intergenic | 25.0% |
| ! | ATTTAACATTCAGAATGATG+TGG | - | chr6.4:20427033-20427052 | MS.gene81466:CDS | 25.0% |
| ! | CATCAGTACATAATAACATA+TGG | + | chr6.4:20426860-20426879 | None:intergenic | 25.0% |
| ! | CATGTACAAATTATCAACAA+AGG | + | chr6.4:20424834-20424853 | None:intergenic | 25.0% |
| ! | CATTGCTTAGTAACATAAAT+AGG | + | chr6.4:20427780-20427799 | None:intergenic | 25.0% |
| ! | CCTAAAAAAAAAAAACAGAC+AGG | + | chr6.4:20425067-20425086 | None:intergenic | 25.0% |
| ! | CTAAACTGAAAATAACAAGA+AGG | + | chr6.4:20425128-20425147 | None:intergenic | 25.0% |
| ! | CTATTTATGTTACTAAGCAA+TGG | - | chr6.4:20427778-20427797 | MS.gene81466:intron | 25.0% |
| ! | GAACAAAAAACAAAAGTTGT+CGG | + | chr6.4:20425227-20425246 | None:intergenic | 25.0% |
| ! | GAGATTAATCTCTGATAAAA+TGG | - | chr6.4:20426808-20426827 | MS.gene81466:CDS | 25.0% |
| ! | GATTAATCTCTGATAAAATG+GGG | - | chr6.4:20426810-20426829 | MS.gene81466:CDS | 25.0% |
| ! | GGTTTACTATTATTATCAGT+AGG | - | chr6.4:20426895-20426914 | MS.gene81466:CDS | 25.0% |
| ! | TAAAATTCACTAATATGCGA+TGG | + | chr6.4:20426134-20426153 | None:intergenic | 25.0% |
| ! | TAACTTTCGAAAGATTAATC+TGG | - | chr6.4:20428216-20428235 | MS.gene81466:intron | 25.0% |
| ! | TATATATAACCTAGTTGAGA+CGG | + | chr6.4:20426836-20426855 | None:intergenic | 25.0% |
| ! | TCAGAAAATAGAAAAGAGAA+GGG | + | chr6.4:20425562-20425581 | None:intergenic | 25.0% |
| ! | TTATCAAAAGCCAAAAAATG+AGG | + | chr6.4:20425437-20425456 | None:intergenic | 25.0% |
| !! | AAATTTTCCAACCTTTTCTT+TGG | - | chr6.4:20427700-20427719 | MS.gene81466:intron | 25.0% |
| !! | AATTTTCCAACCTTTTCTTT+GGG | - | chr6.4:20427701-20427720 | MS.gene81466:intron | 25.0% |
| !! | ACTTAAAGAATGGTGTTTTA+AGG | - | chr6.4:20426028-20426047 | MS.gene81466:intron | 25.0% |
| !! | GTACTTTAGAAAAAAGCTAA+GGG | - | chr6.4:20428099-20428118 | MS.gene81466:intron | 25.0% |
| !! | GTCATATTCAATACTTTTGA+AGG | + | chr6.4:20427350-20427369 | None:intergenic | 25.0% |
| !! | TGTACTTTAGAAAAAAGCTA+AGG | - | chr6.4:20428098-20428117 | MS.gene81466:intron | 25.0% |
| !! | TTCGTATTATGATGGAATTA+AGG | - | chr6.4:20427156-20427175 | MS.gene81466:CDS | 25.0% |
| !! | TTTTGTTCAGTCAATACAAT+TGG | - | chr6.4:20427522-20427541 | MS.gene81466:intron | 25.0% |
| !!! | AATTTTTTGCGATGTTTTGA+AGG | - | chr6.4:20427985-20428004 | MS.gene81466:intron | 25.0% |
| !!! | ACATTTGATTTTGAATAAGG+TGG | - | chr6.4:20426709-20426728 | MS.gene81466:CDS | 25.0% |
| !!! | ACTTTTGTTTTTTGTTCTCT+CGG | - | chr6.4:20425230-20425249 | MS.gene81466:intron | 25.0% |
| !!! | ATTTTAATGGGATGATATTG+TGG | - | chr6.4:20424994-20425013 | MS.gene81466:intron | 25.0% |
| !!! | CATTTGATTTTGAATAAGGT+GGG | - | chr6.4:20426710-20426729 | MS.gene81466:CDS | 25.0% |
| !!! | CCTGTCTGTTTTTTTTTTTT+AGG | - | chr6.4:20425064-20425083 | MS.gene81466:intron | 25.0% |
| !!! | CTTAAAGAATGGTGTTTTAA+GGG | - | chr6.4:20426029-20426048 | MS.gene81466:intron | 25.0% |
| !!! | TGGACATTACTTTTTCAATA+TGG | - | chr6.4:20426622-20426641 | MS.gene81466:intron | 25.0% |
| !!! | TTAGCTTTTTTCTAAAGTAC+AGG | + | chr6.4:20428099-20428118 | None:intergenic | 25.0% |
| !!! | TTGAATATTAGCTTTTCTGT+TGG | - | chr6.4:20428398-20428417 | MS.gene81466:intron | 25.0% |
| !!! | TTTTTTGGCTTTTGATAACA+AGG | - | chr6.4:20425439-20425458 | MS.gene81466:intron | 25.0% |
| AAAGCAAAACGAAACAAAAG+AGG | + | chr6.4:20424536-20424555 | None:intergenic | 30.0% | |
| AAGAGATCACAATCACAAAT+GGG | + | chr6.4:20426363-20426382 | None:intergenic | 30.0% | |
| AATCTGATGCATCTAATGTT+AGG | + | chr6.4:20428669-20428688 | None:intergenic | 30.0% | |
| AGATTAATCTGGTTATTCTG+TGG | - | chr6.4:20428227-20428246 | MS.gene81466:intron | 30.0% | |
| ATAATATAAGAATGTCGGGA+TGG | + | chr6.4:20428352-20428371 | None:intergenic | 30.0% | |
| ATCTGTTATGCATAAATGTG+TGG | - | chr6.4:20425759-20425778 | MS.gene81466:intron | 30.0% | |
| ATGTTGTTCTGTTTATGTGT+TGG | - | chr6.4:20425198-20425217 | MS.gene81466:intron | 30.0% | |
| ATTCATATACGAGTGTGTAT+TGG | + | chr6.4:20424495-20424514 | None:intergenic | 30.0% | |
| CAAAAAACTCGTCAATGTTT+GGG | - | chr6.4:20425937-20425956 | MS.gene81466:intron | 30.0% | |
| CAGAAAATAGAAAAGAGAAG+GGG | + | chr6.4:20425561-20425580 | None:intergenic | 30.0% | |
| CCATCATAATACGAAAACTT+TGG | + | chr6.4:20427151-20427170 | None:intergenic | 30.0% | |
| CTAACTGATAAGGACTATAT+GGG | - | chr6.4:20425883-20425902 | MS.gene81466:intron | 30.0% | |
| CTCATTCTTTGATATTTCCT+CGG | + | chr6.4:20428292-20428311 | None:intergenic | 30.0% | |
| CTGTAGATTGAAAAAGGTAA+AGG | + | chr6.4:20426465-20426484 | None:intergenic | 30.0% | |
| GATAGGAGAAACTTAAAGAA+TGG | - | chr6.4:20426018-20426037 | MS.gene81466:intron | 30.0% | |
| TCAAAAAACTCGTCAATGTT+TGG | - | chr6.4:20425936-20425955 | MS.gene81466:intron | 30.0% | |
| TCCCATTAAAATATCAACCA+CGG | + | chr6.4:20424986-20425005 | None:intergenic | 30.0% | |
| TCTGATACTATCAACAATGA+AGG | - | chr6.4:20426270-20426289 | MS.gene81466:intron | 30.0% | |
| TGAATATTTGAACTCAAGGA+GGG | - | chr6.4:20428258-20428277 | MS.gene81466:intron | 30.0% | |
| TTAGATACCTTCAATTCAGT+AGG | + | chr6.4:20427374-20427393 | None:intergenic | 30.0% | |
| TTGAATATTTGAACTCAAGG+AGG | - | chr6.4:20428257-20428276 | MS.gene81466:intron | 30.0% | |
| TTGGTATTTAATCTCAAGGT+TGG | - | chr6.4:20426602-20426621 | MS.gene81466:intron | 30.0% | |
| TTGTATTGTGTTGAACTTAG+TGG | - | chr6.4:20428012-20428031 | MS.gene81466:intron | 30.0% | |
| ! | AAATTTTCTGCAAGTTGTGA+TGG | - | chr6.4:20427243-20427262 | MS.gene81466:CDS | 30.0% |
| ! | AATTTTCTGCAAGTTGTGAT+GGG | - | chr6.4:20427244-20427263 | MS.gene81466:CDS | 30.0% |
| ! | ACAGTTGGTATTTAATCTCA+AGG | - | chr6.4:20426598-20426617 | MS.gene81466:intron | 30.0% |
| ! | ACCTTGATAATTGCAACATA+CGG | + | chr6.4:20424713-20424732 | None:intergenic | 30.0% |
| ! | ATTGTTTTCTCTTTTCCTTG+AGG | - | chr6.4:20426416-20426435 | MS.gene81466:CDS | 30.0% |
| ! | ATTTTCCAACCTTTTCTTTG+GGG | - | chr6.4:20427702-20427721 | MS.gene81466:intron | 30.0% |
| ! | CCAAAGTTTTCGTATTATGA+TGG | - | chr6.4:20427148-20427167 | MS.gene81466:CDS | 30.0% |
| ! | CTAGCTCTCCATTTAATAAA+CGG | + | chr6.4:20427325-20427344 | None:intergenic | 30.0% |
| ! | TTATATACTAGAAGTGCAGA+TGG | - | chr6.4:20424790-20424809 | MS.gene81466:intron | 30.0% |
| ! | TTATTTTCAGTTTAGCAGTC+CGG | - | chr6.4:20425133-20425152 | MS.gene81466:intron | 30.0% |
| ! | TTTTATGTCTCTTCCTTTTC+CGG | + | chr6.4:20424440-20424459 | None:intergenic | 30.0% |
| !! | ATGATGGAATTAAGGTTTTG+AGG | - | chr6.4:20427164-20427183 | MS.gene81466:CDS | 30.0% |
| !! | CATTGTTGATAGTATCAGAA+CGG | + | chr6.4:20426269-20426288 | None:intergenic | 30.0% |
| !! | CTGATGAATTACTGATTTAG+TGG | - | chr6.4:20426874-20426893 | MS.gene81466:CDS | 30.0% |
| !! | GAAGGCATTAACATTAGTTT+AGG | - | chr6.4:20426288-20426307 | MS.gene81466:intron | 30.0% |
| !! | TGATGGAATTAAGGTTTTGA+GGG | - | chr6.4:20427165-20427184 | MS.gene81466:CDS | 30.0% |
| !! | TGTCTTTGAGCTTTAAACAT+GGG | - | chr6.4:20426996-20427015 | MS.gene81466:CDS | 30.0% |
| !! | TTGTCTTTGAGCTTTAAACA+TGG | - | chr6.4:20426995-20427014 | MS.gene81466:CDS | 30.0% |
| ACAGGGAAGCTAATCTAAAA+AGG | + | chr6.4:20425358-20425377 | None:intergenic | 35.0% | |
| ACTATGGAAGCTAACTGATA+AGG | - | chr6.4:20425873-20425892 | MS.gene81466:intron | 35.0% | |
| ATCTAAAGACAAAGTTCCGA+AGG | - | chr6.4:20426323-20426342 | MS.gene81466:intron | 35.0% | |
| ATCTGGAAGTTGTTTGTGTA+TGG | + | chr6.4:20425797-20425816 | None:intergenic | 35.0% | |
| ATGATATTGTGGATGAGATC+AGG | - | chr6.4:20425005-20425024 | MS.gene81466:intron | 35.0% | |
| ATTTGCAACCAGCAAAATGT+TGG | - | chr6.4:20428450-20428469 | MS.gene81466:intron | 35.0% | |
| CAAGAGATCACAATCACAAA+TGG | + | chr6.4:20426364-20426383 | None:intergenic | 35.0% | |
| CCAGATGAAGCAGAAAAAAA+GGG | - | chr6.4:20425664-20425683 | MS.gene81466:intron | 35.0% | |
| CCCATTAAAATATCAACCAC+GGG | + | chr6.4:20424985-20425004 | None:intergenic | 35.0% | |
| CCTGACAAAAAAAACATCTC+TGG | + | chr6.4:20425588-20425607 | None:intergenic | 35.0% | |
| CTGTTACGCCGTTTATTAAA+TGG | - | chr6.4:20427314-20427333 | MS.gene81466:CDS | 35.0% | |
| GAATATGCACGTGTTGTATT+TGG | - | chr6.4:20425398-20425417 | MS.gene81466:intron | 35.0% | |
| GCTAACTGATAAGGACTATA+TGG | - | chr6.4:20425882-20425901 | MS.gene81466:intron | 35.0% | |
| GGAGTTCTGTAGATTGAAAA+AGG | + | chr6.4:20426471-20426490 | None:intergenic | 35.0% | |
| TAAAAACCAAACAGCACATG+AGG | + | chr6.4:20428144-20428163 | None:intergenic | 35.0% | |
| TATCGTCAATTGATCGCATA+CGG | + | chr6.4:20427898-20427917 | None:intergenic | 35.0% | |
| TATGACACCTACTGAATTGA+AGG | - | chr6.4:20427364-20427383 | MS.gene81466:CDS | 35.0% | |
| TCCAGATGAAGCAGAAAAAA+AGG | - | chr6.4:20425663-20425682 | MS.gene81466:intron | 35.0% | |
| TCTGGAAGTTGTTTGTGTAT+GGG | + | chr6.4:20425796-20425815 | None:intergenic | 35.0% | |
| TTATGCATAACAGATTCTGC+AGG | + | chr6.4:20425754-20425773 | None:intergenic | 35.0% | |
| TTCGCATGTTGTCACTATTT+GGG | - | chr6.4:20424555-20424574 | MS.gene81466:CDS | 35.0% | |
| TTGTTAGATCAAACGTATGG+TGG | + | chr6.4:20427807-20427826 | None:intergenic | 35.0% | |
| TTGTTCTGTTTATGTGTTGG+TGG | - | chr6.4:20425201-20425220 | MS.gene81466:intron | 35.0% | |
| TTTCGCATGTTGTCACTATT+TGG | - | chr6.4:20424554-20424573 | MS.gene81466:CDS | 35.0% | |
| ! | GATCATCAAGCTTCCATTTT+GGG | + | chr6.4:20425623-20425642 | None:intergenic | 35.0% |
| ! | GGCTTTTGATATTTAACCTC+AGG | + | chr6.4:20424692-20424711 | None:intergenic | 35.0% |
| ! | TGATCATCAAGCTTCCATTT+TGG | + | chr6.4:20425624-20425643 | None:intergenic | 35.0% |
| !! | AGTGTATAAAGGTGTTGTCA+TGG | - | chr6.4:20424916-20424935 | MS.gene81466:intron | 35.0% |
| !! | GATTTTCAATAATTTGCCCG+TGG | - | chr6.4:20424966-20424985 | MS.gene81466:intron | 35.0% |
| !!! | AAAGAATGGTGTTTTAAGGG+AGG | - | chr6.4:20426032-20426051 | MS.gene81466:intron | 35.0% |
| !!! | ATGGAATTAAGGTTTTGAGG+GGG | - | chr6.4:20427167-20427186 | MS.gene81466:CDS | 35.0% |
| !!! | CCAGAGATGTTTTTTTTGTC+AGG | - | chr6.4:20425585-20425604 | MS.gene81466:intron | 35.0% |
| !!! | CCCGTGGTTGATATTTTAAT+GGG | - | chr6.4:20424982-20425001 | MS.gene81466:intron | 35.0% |
| !!! | GATGGAATTAAGGTTTTGAG+GGG | - | chr6.4:20427166-20427185 | MS.gene81466:CDS | 35.0% |
| !!! | GTGAATTTTAAAGCGCTAAC+AGG | - | chr6.4:20426144-20426163 | MS.gene81466:intron | 35.0% |
| ACACAGCAGCAAACAAATAG+AGG | + | chr6.4:20425100-20425119 | None:intergenic | 40.0% | |
| ACACCGAAAGCCAAAATAAC+CGG | + | chr6.4:20425155-20425174 | None:intergenic | 40.0% | |
| ACCGTAGATGATGTAGATCA+AGG | + | chr6.4:20427123-20427142 | None:intergenic | 40.0% | |
| ACGTGTTGTATTTGGCATGT+CGG | - | chr6.4:20425406-20425425 | MS.gene81466:intron | 40.0% | |
| ACTTTCTGCACAATAAACCC+GGG | + | chr6.4:20425832-20425851 | None:intergenic | 40.0% | |
| AGAATGATGTGGTCGACTAA+CGG | - | chr6.4:20427044-20427063 | MS.gene81466:CDS | 40.0% | |
| AGGAAGGTCTGATTAAGGAT+AGG | - | chr6.4:20426001-20426020 | MS.gene81466:intron | 40.0% | |
| AGGACATGCTAACCGATATA+TGG | - | chr6.4:20428494-20428513 | MS.gene81466:intron | 40.0% | |
| ATACAACACGTGCATATTCC+AGG | + | chr6.4:20425397-20425416 | None:intergenic | 40.0% | |
| ATAGGGTCTGATCTGATTAG+AGG | + | chr6.4:20427762-20427781 | None:intergenic | 40.0% | |
| ATTCTGCAGGAACTTCATCT+TGG | + | chr6.4:20425741-20425760 | None:intergenic | 40.0% | |
| CAAACAAAAGCTACGACAGT+TGG | - | chr6.4:20426583-20426602 | MS.gene81466:intron | 40.0% | |
| CACAACAACAAAAAGACCCA+AGG | + | chr6.4:20425178-20425197 | None:intergenic | 40.0% | |
| CACTTTCTGCACAATAAACC+CGG | + | chr6.4:20425833-20425852 | None:intergenic | 40.0% | |
| CCCTTGATCTACATCATCTA+CGG | - | chr6.4:20427119-20427138 | MS.gene81466:CDS | 40.0% | |
| CCGTAGATGATGTAGATCAA+GGG | + | chr6.4:20427122-20427141 | None:intergenic | 40.0% | |
| CTTAATCAGACCTTCCTGAT+CGG | + | chr6.4:20425998-20426017 | None:intergenic | 40.0% | |
| GACATCACACTATCCCAAAA+TGG | - | chr6.4:20425607-20425626 | MS.gene81466:intron | 40.0% | |
| GATGAAGCAGAAAAAAAGGG+AGG | - | chr6.4:20425667-20425686 | MS.gene81466:intron | 40.0% | |
| GCAAAACGAAACAAAAGAGG+AGG | + | chr6.4:20424533-20424552 | None:intergenic | 40.0% | |
| GCCGTATGTTGCAATTATCA+AGG | - | chr6.4:20424709-20424728 | MS.gene81466:CDS | 40.0% | |
| GCTGAAGTCATAGAAATAGC+AGG | + | chr6.4:20428566-20428585 | None:intergenic | 40.0% | |
| GGATTGCCAATAACAAGACA+GGG | + | chr6.4:20425375-20425394 | None:intergenic | 40.0% | |
| GTTGAAGAAGCTAAACCCAT+TGG | - | chr6.4:20424397-20424416 | MS.gene81466:intron | 40.0% | |
| TAATATGCGATGGTGCTCAA+AGG | + | chr6.4:20426124-20426143 | None:intergenic | 40.0% | |
| TACAACACGTGCATATTCCA+GGG | + | chr6.4:20425396-20425415 | None:intergenic | 40.0% | |
| TCGAAATAGTCTCCATTCTC+TGG | - | chr6.4:20426065-20426084 | MS.gene81466:intron | 40.0% | |
| TCTCCAGAGAAACTACAACT+GGG | + | chr6.4:20426523-20426542 | None:intergenic | 40.0% | |
| TGTGATTGTGATCTCTTGTG+TGG | - | chr6.4:20426366-20426385 | MS.gene81466:intron | 40.0% | |
| TTCATGGCTGCATCATTCTT+GGG | - | chr6.4:20427844-20427863 | MS.gene81466:intron | 40.0% | |
| TTCTCCAGAGAAACTACAAC+TGG | + | chr6.4:20426524-20426543 | None:intergenic | 40.0% | |
| TTCTTCGTCTTCTTCTTCAC+TGG | + | chr6.4:20424371-20424390 | None:intergenic | 40.0% | |
| TTTCATGGCTGCATCATTCT+TGG | - | chr6.4:20427843-20427862 | MS.gene81466:intron | 40.0% | |
| ! | AATGGAAGCTTGATGATCAC+AGG | - | chr6.4:20425625-20425644 | MS.gene81466:intron | 40.0% |
| ! | AGAACTCCAAGTCTTTTGTC+TGG | - | chr6.4:20426483-20426502 | MS.gene81466:CDS | 40.0% |
| ! | ATGGAAGCTTGATGATCACA+GGG | - | chr6.4:20425626-20425645 | MS.gene81466:intron | 40.0% |
| ! | GTTTAGCAGTCCGGTTATTT+TGG | - | chr6.4:20425142-20425161 | MS.gene81466:intron | 40.0% |
| ! | TAGCTTCCCTGTCTTGTTAT+TGG | - | chr6.4:20425366-20425385 | MS.gene81466:intron | 40.0% |
| !! | GCCCGTGGTTGATATTTTAA+TGG | - | chr6.4:20424981-20425000 | MS.gene81466:intron | 40.0% |
| !! | GGTACTTCAAGAAGTACCTT+CGG | + | chr6.4:20426342-20426361 | None:intergenic | 40.0% |
| !! | GTGATGGATATTATCTGTGC+AGG | - | chr6.4:20428474-20428493 | MS.gene81466:intron | 40.0% |
| !!! | AGTCCGGTTATTTTGGCTTT+CGG | - | chr6.4:20425149-20425168 | MS.gene81466:intron | 40.0% |
| !!! | CCCTTTTTTTCTGCTTCATC+TGG | + | chr6.4:20425667-20425686 | None:intergenic | 40.0% |
| !!! | GGTGGATGCTTTTTAAGTTC+AGG | - | chr6.4:20427065-20427084 | MS.gene81466:CDS | 40.0% |
| !!! | TGTTGCTCTACTTTTTCAGC+TGG | - | chr6.4:20428591-20428610 | MS.gene81466:CDS | 40.0% |
| !!! | TTGTTTTTTGTTCTCTCGGC+TGG | - | chr6.4:20425234-20425253 | MS.gene81466:intron | 40.0% |
| AAAAAAAGGGAGGTGGTAGC+TGG | - | chr6.4:20425677-20425696 | MS.gene81466:intron | 45.0% | |
| AACCCATTGGTGAACCTGTT+AGG | - | chr6.4:20424410-20424429 | MS.gene81466:intron | 45.0% | |
| AACCCTAACAGGTTCACCAA+TGG | + | chr6.4:20424416-20424435 | None:intergenic | 45.0% | |
| ACCCATTGGTGAACCTGTTA+GGG | - | chr6.4:20424411-20424430 | MS.gene81466:intron | 45.0% | |
| ACCCTAACAGGTTCACCAAT+GGG | + | chr6.4:20424415-20424434 | None:intergenic | 45.0% | |
| CGATCAGGAAGGTCTGATTA+AGG | - | chr6.4:20425996-20426015 | MS.gene81466:intron | 45.0% | |
| CGTGTTGTATTTGGCATGTC+GGG | - | chr6.4:20425407-20425426 | MS.gene81466:intron | 45.0% | |
| GAAGCAGAAAAAAAGGGAGG+TGG | - | chr6.4:20425670-20425689 | MS.gene81466:intron | 45.0% | |
| GCACAATTCCCTAGTGTTAC+TGG | + | chr6.4:20426093-20426112 | None:intergenic | 45.0% | |
| GGGATTGCCAATAACAAGAC+AGG | + | chr6.4:20425376-20425395 | None:intergenic | 45.0% | |
| GTGTTACCTACTCTTTCTGC+AGG | - | chr6.4:20424646-20424665 | MS.gene81466:intron | 45.0% | |
| TACAACTGGGACAGCAACAT+CGG | + | chr6.4:20426510-20426529 | None:intergenic | 45.0% | |
| TGTCCCAGTTGTAGTTTCTC+TGG | - | chr6.4:20426517-20426536 | MS.gene81466:intron | 45.0% | |
| TTACCTACTCTTTCTGCAGG+AGG | - | chr6.4:20424649-20424668 | MS.gene81466:intron | 45.0% | |
| TTTCAGTCCTTCGATCTCCT+TGG | - | chr6.4:20424466-20424485 | MS.gene81466:intron | 45.0% | |
| ! | GGTGGGACAGTTACAGTTTT+TGG | - | chr6.4:20426727-20426746 | MS.gene81466:CDS | 45.0% |
| ! | TGAGAACCTCATGTGCTGTT+TGG | - | chr6.4:20428135-20428154 | MS.gene81466:intron | 45.0% |
| !! | CTCTGGAACCAGTAACACTA+GGG | - | chr6.4:20426082-20426101 | MS.gene81466:intron | 45.0% |
| !! | GTCTTGTTATTGGCAATCCC+TGG | - | chr6.4:20425376-20425395 | MS.gene81466:intron | 45.0% |
| !! | GTGTTACTGGTTCCAGAGAA+TGG | + | chr6.4:20426080-20426099 | None:intergenic | 45.0% |
| !! | TCTCTGGAACCAGTAACACT+AGG | - | chr6.4:20426081-20426100 | MS.gene81466:intron | 45.0% |
| !! | TTCCAACCTTTTCTTTGGGG+TGG | - | chr6.4:20427705-20427724 | MS.gene81466:intron | 45.0% |
| !!! | AATTAAGGTTTTGAGGGGGC+TGG | - | chr6.4:20427171-20427190 | MS.gene81466:CDS | 45.0% |
| !!! | ATTTTGGCTTTCGGTGTCCT+TGG | - | chr6.4:20425158-20425177 | MS.gene81466:intron | 45.0% |
| !!! | GTCGGGTTGTCCTCATTTTT+TGG | - | chr6.4:20425424-20425443 | MS.gene81466:intron | 45.0% |
| !!! | TCCAACCTTTTCTTTGGGGT+GGG | - | chr6.4:20427706-20427725 | MS.gene81466:intron | 45.0% |
| !!! | TTTTGGCTTTCGGTGTCCTT+GGG | - | chr6.4:20425159-20425178 | MS.gene81466:intron | 45.0% |
| !! | TATATAATTTATTATGAAAA+AGG | + | chr6.4:20424777-20424796 | None:intergenic | 5.0% |
| AAAATGGGGCCGTCTCAACT+AGG | - | chr6.4:20426824-20426843 | MS.gene81466:CDS | 50.0% | |
| AACTCCCCACCCCAAAGAAA+AGG | + | chr6.4:20427714-20427733 | None:intergenic | 50.0% | |
| AAGTGATGAGGTGGAGAAGG+AGG | - | chr6.4:20424330-20424349 | MS.gene81466:CDS | 50.0% | |
| ACAACTGGGACAGCAACATC+GGG | + | chr6.4:20426509-20426528 | None:intergenic | 50.0% | |
| AGGAGATACCCATCGTGACA+AGG | - | chr6.4:20426164-20426183 | MS.gene81466:intron | 50.0% | |
| ATCGGGCCAGACAAAAGACT+TGG | + | chr6.4:20426492-20426511 | None:intergenic | 50.0% | |
| ATGATGTGGTCGACTAACGG+TGG | - | chr6.4:20427047-20427066 | MS.gene81466:CDS | 50.0% | |
| CAGCTGGAATGCATTGCTTG+TGG | - | chr6.4:20428607-20428626 | MS.gene81466:CDS | 50.0% | |
| CCAGCAAAATGTTGGCGTGA+TGG | - | chr6.4:20428458-20428477 | MS.gene81466:intron | 50.0% | |
| CCTGTTAGGGTTTCCGGAAA+AGG | - | chr6.4:20424424-20424443 | MS.gene81466:intron | 50.0% | |
| CGACAAACCCTTGTCACGAT+GGG | + | chr6.4:20426175-20426194 | None:intergenic | 50.0% | |
| CTGATCGGTAGCAGGTTCAT+CGG | + | chr6.4:20425983-20426002 | None:intergenic | 50.0% | |
| CTGCAGGAACTTCATCTTGG+TGG | + | chr6.4:20425738-20425757 | None:intergenic | 50.0% | |
| GCATTGCTTGTGGTTCTTCC+TGG | - | chr6.4:20428617-20428636 | MS.gene81466:CDS | 50.0% | |
| GGAGATACCCATCGTGACAA+GGG | - | chr6.4:20426165-20426184 | MS.gene81466:intron | 50.0% | |
| GGTGAACCTGTTAGGGTTTC+CGG | - | chr6.4:20424418-20424437 | MS.gene81466:intron | 50.0% | |
| GGTGGAGAAGGAGGAAGATA+AGG | - | chr6.4:20424339-20424358 | MS.gene81466:CDS | 50.0% | |
| GGTTCATCGGTCTCGATATC+AGG | + | chr6.4:20425970-20425989 | None:intergenic | 50.0% | |
| GTCAAGTGATGAGGTGGAGA+AGG | - | chr6.4:20424327-20424346 | MS.gene81466:CDS | 50.0% | |
| GTGGATGAGATCAGGCAGAT+GGG | - | chr6.4:20425013-20425032 | MS.gene81466:intron | 50.0% | |
| TCGACAAACCCTTGTCACGA+TGG | + | chr6.4:20426176-20426195 | None:intergenic | 50.0% | |
| TGTGGATGAGATCAGGCAGA+TGG | - | chr6.4:20425012-20425031 | MS.gene81466:intron | 50.0% | |
| TTGGTCTCCAAGGAGATCGA+AGG | + | chr6.4:20424476-20424495 | None:intergenic | 50.0% | |
| ! | ACCTCAGGCAAAAGAAGCAC+AGG | + | chr6.4:20424677-20424696 | None:intergenic | 50.0% |
| ! | CCATCACGCCAACATTTTGC+TGG | + | chr6.4:20428461-20428480 | None:intergenic | 50.0% |
| ! | CCTCAGGCAAAAGAAGCACA+GGG | + | chr6.4:20424676-20424695 | None:intergenic | 50.0% |
| ! | CCTTTTCCGGAAACCCTAAC+AGG | + | chr6.4:20424427-20424446 | None:intergenic | 50.0% |
| ! | CGAGTGTGTATTGGTCTCCA+AGG | + | chr6.4:20424486-20424505 | None:intergenic | 50.0% |
| ! | CTGGTTTGCCTCTTGTGATG+CGG | - | chr6.4:20428636-20428655 | MS.gene81466:CDS | 50.0% |
| ! | TTTGGGGTGGGGAGTTAGAA+GGG | - | chr6.4:20427718-20427737 | MS.gene81466:intron | 50.0% |
| !!! | CCAACCTTTTCTTTGGGGTG+GGG | - | chr6.4:20427707-20427726 | MS.gene81466:intron | 50.0% |
| AGACCTTCCTGATCGGTAGC+AGG | + | chr6.4:20425991-20426010 | None:intergenic | 55.0% | |
| CAGATCGCAAGCAACATCCC+GGG | - | chr6.4:20425812-20425831 | MS.gene81466:intron | 55.0% | |
| CCAGATCGCAAGCAACATCC+CGG | - | chr6.4:20425811-20425830 | MS.gene81466:intron | 55.0% | |
| CCCCACCCCAAAGAAAAGGT+TGG | + | chr6.4:20427710-20427729 | None:intergenic | 55.0% | |
| CGATGAACCTGCTACCGATC+AGG | - | chr6.4:20425981-20426000 | MS.gene81466:intron | 55.0% | |
| CGCATCACAAGAGGCAAACC+AGG | + | chr6.4:20428638-20428657 | None:intergenic | 55.0% | |
| GAACCTGCTACCGATCAGGA+AGG | - | chr6.4:20425985-20426004 | MS.gene81466:intron | 55.0% | |
| GACAGACACCGCATCACAAG+AGG | + | chr6.4:20428647-20428666 | None:intergenic | 55.0% | |
| GGTCCTCCTGCAGAAAGAGT+AGG | + | chr6.4:20424655-20424674 | None:intergenic | 55.0% | |
| TTGGGGTGGGGAGTTAGAAG+GGG | - | chr6.4:20427719-20427738 | MS.gene81466:intron | 55.0% | |
| ! | CCCTGTGCTTCTTTTGCCTG+AGG | - | chr6.4:20424673-20424692 | MS.gene81466:intron | 55.0% |
| ! | GCTTGATGATCACAGGGCAG+TGG | - | chr6.4:20425632-20425651 | MS.gene81466:intron | 55.0% |
| !! | CTTTGGGGTGGGGAGTTAGA+AGG | - | chr6.4:20427717-20427736 | MS.gene81466:intron | 55.0% |
| !! | TTTGAGGGGGCTGGTTCTTC+TGG | - | chr6.4:20427180-20427199 | MS.gene81466:CDS | 55.0% |
| AGATGGGCAACGTGCAGCTG+CGG | - | chr6.4:20425029-20425048 | MS.gene81466:intron | 60.0% | |
| CAAGGAGGGTTTGACTGCCG+AGG | - | chr6.4:20428272-20428291 | MS.gene81466:intron | 60.0% | |
| ! | CCGGGATGTTGCTTGCGATC+TGG | + | chr6.4:20425814-20425833 | None:intergenic | 60.0% |
| TGGGCAACGTGCAGCTGCGG+AGG | - | chr6.4:20425032-20425051 | MS.gene81466:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 20424322 | 20428696 | 20424322 | ID=MS.gene81466 |
| chr6.4 | mRNA | 20424322 | 20428696 | 20424322 | ID=MS.gene81466.t1;Parent=MS.gene81466 |
| chr6.4 | exon | 20428514 | 20428696 | 20428514 | ID=MS.gene81466.t1.exon1;Parent=MS.gene81466.t1 |
| chr6.4 | CDS | 20428514 | 20428696 | 20428514 | ID=cds.MS.gene81466.t1;Parent=MS.gene81466.t1 |
| chr6.4 | exon | 20428288 | 20428350 | 20428288 | ID=MS.gene81466.t1.exon2;Parent=MS.gene81466.t1 |
| chr6.4 | CDS | 20428288 | 20428350 | 20428288 | ID=cds.MS.gene81466.t1;Parent=MS.gene81466.t1 |
| chr6.4 | exon | 20426674 | 20427411 | 20426674 | ID=MS.gene81466.t1.exon3;Parent=MS.gene81466.t1 |
| chr6.4 | CDS | 20426674 | 20427411 | 20426674 | ID=cds.MS.gene81466.t1;Parent=MS.gene81466.t1 |
| chr6.4 | exon | 20426399 | 20426533 | 20426399 | ID=MS.gene81466.t1.exon4;Parent=MS.gene81466.t1 |
| chr6.4 | CDS | 20426399 | 20426533 | 20426399 | ID=cds.MS.gene81466.t1;Parent=MS.gene81466.t1 |
| chr6.4 | exon | 20424683 | 20424742 | 20424683 | ID=MS.gene81466.t1.exon5;Parent=MS.gene81466.t1 |
| chr6.4 | CDS | 20424683 | 20424742 | 20424683 | ID=cds.MS.gene81466.t1;Parent=MS.gene81466.t1 |
| chr6.4 | exon | 20424503 | 20424589 | 20424503 | ID=MS.gene81466.t1.exon6;Parent=MS.gene81466.t1 |
| chr6.4 | CDS | 20424503 | 20424589 | 20424503 | ID=cds.MS.gene81466.t1;Parent=MS.gene81466.t1 |
| chr6.4 | exon | 20424322 | 20424408 | 20424322 | ID=MS.gene81466.t1.exon7;Parent=MS.gene81466.t1 |
| chr6.4 | CDS | 20424322 | 20424408 | 20424322 | ID=cds.MS.gene81466.t1;Parent=MS.gene81466.t1 |
| Gene Sequence |
| Protein sequence |
