Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063041.t1 | XP_003615008.2 | 97.3 | 782 | 21 | 0 | 1 | 782 | 1 | 782 | 0.00E+00 | 1561.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063041.t1 | Q9SGZ5 | 63.9 | 753 | 261 | 6 | 34 | 782 | 22 | 767 | 2.7e-292 | 1005.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063041.t1 | G7KA64 | 97.3 | 782 | 21 | 0 | 1 | 782 | 1 | 782 | 0.0e+00 | 1561.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047087 | MS.gene063041 | PPI |
| MS.gene35037 | MS.gene063041 | PPI |
| MS.gene051339 | MS.gene063041 | PPI |
| MS.gene072706 | MS.gene063041 | PPI |
| MS.gene07041 | MS.gene063041 | PPI |
| MS.gene56021 | MS.gene063041 | PPI |
| MS.gene01140 | MS.gene063041 | PPI |
| MS.gene063041 | MS.gene005527 | PPI |
| MS.gene028420 | MS.gene063041 | PPI |
| MS.gene025671 | MS.gene063041 | PPI |
| MS.gene068643 | MS.gene063041 | PPI |
| MS.gene063041 | MS.gene20796 | PPI |
| MS.gene002171 | MS.gene063041 | PPI |
| MS.gene036268 | MS.gene063041 | PPI |
| MS.gene71615 | MS.gene063041 | PPI |
| MS.gene00195 | MS.gene063041 | PPI |
| MS.gene70386 | MS.gene063041 | PPI |
| MS.gene058203 | MS.gene063041 | PPI |
| MS.gene28801 | MS.gene063041 | PPI |
| MS.gene069177 | MS.gene063041 | PPI |
| MS.gene07274 | MS.gene063041 | PPI |
| MS.gene027856 | MS.gene063041 | PPI |
| MS.gene20846 | MS.gene063041 | PPI |
| MS.gene96691 | MS.gene063041 | PPI |
| MS.gene91308 | MS.gene063041 | PPI |
| MS.gene86920 | MS.gene063041 | PPI |
| MS.gene071952 | MS.gene063041 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063041.t1 | MTR_5g062430 | 97.315 | 782 | 21 | 0 | 1 | 782 | 1 | 782 | 0.0 | 1589 |
| MS.gene063041.t1 | MTR_5g062320 | 90.932 | 783 | 67 | 2 | 1 | 782 | 1 | 780 | 0.0 | 1469 |
| MS.gene063041.t1 | MTR_5g062370 | 90.641 | 780 | 73 | 0 | 1 | 780 | 1 | 780 | 0.0 | 1456 |
| MS.gene063041.t1 | MTR_5g062650 | 85.987 | 785 | 107 | 2 | 1 | 782 | 1 | 785 | 0.0 | 1390 |
| MS.gene063041.t1 | MTR_3g074060 | 70.000 | 780 | 227 | 3 | 4 | 782 | 3 | 776 | 0.0 | 1174 |
| MS.gene063041.t1 | MTR_5g062370 | 89.267 | 587 | 63 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1100 |
| MS.gene063041.t1 | MTR_5g030860 | 48.162 | 789 | 375 | 12 | 11 | 782 | 11 | 782 | 0.0 | 759 |
| MS.gene063041.t1 | MTR_1g106860 | 49.100 | 778 | 366 | 13 | 3 | 772 | 4 | 759 | 0.0 | 748 |
| MS.gene063041.t1 | MTR_2g034720 | 47.321 | 784 | 379 | 11 | 1 | 780 | 1 | 754 | 0.0 | 738 |
| MS.gene063041.t1 | MTR_2g008240 | 47.201 | 786 | 385 | 13 | 6 | 782 | 11 | 775 | 0.0 | 731 |
| MS.gene063041.t1 | MTR_1g087240 | 46.649 | 776 | 384 | 11 | 10 | 780 | 5 | 755 | 0.0 | 723 |
| MS.gene063041.t1 | MTR_7g109390 | 47.410 | 753 | 369 | 12 | 36 | 780 | 28 | 761 | 0.0 | 723 |
| MS.gene063041.t1 | MTR_4g094285 | 46.252 | 787 | 383 | 14 | 10 | 782 | 14 | 774 | 0.0 | 720 |
| MS.gene063041.t1 | MTR_6g028090 | 27.607 | 652 | 337 | 27 | 57 | 638 | 35 | 621 | 7.13e-41 | 159 |
| MS.gene063041.t1 | MTR_6g028120 | 27.273 | 660 | 351 | 30 | 46 | 638 | 5 | 602 | 1.52e-40 | 158 |
| MS.gene063041.t1 | MTR_3g462820 | 26.866 | 603 | 349 | 22 | 50 | 595 | 22 | 589 | 7.37e-40 | 156 |
| MS.gene063041.t1 | MTR_2g030000 | 27.417 | 631 | 331 | 27 | 57 | 613 | 37 | 614 | 4.18e-39 | 154 |
| MS.gene063041.t1 | MTR_3g079750 | 26.923 | 650 | 356 | 28 | 57 | 644 | 35 | 627 | 9.95e-39 | 153 |
| MS.gene063041.t1 | MTR_6g028100 | 27.412 | 653 | 337 | 30 | 57 | 638 | 35 | 621 | 1.61e-38 | 152 |
| MS.gene063041.t1 | MTR_7g086030 | 27.327 | 666 | 335 | 29 | 50 | 638 | 4 | 597 | 3.40e-38 | 151 |
| MS.gene063041.t1 | MTR_7g086030 | 27.477 | 666 | 334 | 29 | 50 | 638 | 29 | 622 | 5.07e-38 | 151 |
| MS.gene063041.t1 | MTR_6g028110 | 26.900 | 658 | 342 | 31 | 57 | 642 | 36 | 626 | 1.27e-37 | 150 |
| MS.gene063041.t1 | MTR_6g028110 | 26.596 | 658 | 344 | 31 | 57 | 642 | 36 | 626 | 2.61e-37 | 149 |
| MS.gene063041.t1 | MTR_5g069800 | 25.331 | 604 | 354 | 22 | 52 | 595 | 7 | 573 | 6.62e-35 | 141 |
| MS.gene063041.t1 | MTR_5g069740 | 25.084 | 594 | 346 | 21 | 57 | 595 | 12 | 561 | 2.21e-30 | 127 |
| MS.gene063041.t1 | MTR_7g086010 | 26.339 | 448 | 245 | 18 | 50 | 436 | 29 | 452 | 6.25e-24 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063041.t1 | AT1G78060 | 64.011 | 753 | 260 | 7 | 34 | 782 | 22 | 767 | 0.0 | 1013 |
| MS.gene063041.t1 | AT5G10560 | 48.496 | 798 | 382 | 8 | 4 | 780 | 1 | 790 | 0.0 | 788 |
| MS.gene063041.t1 | AT3G19620 | 49.933 | 747 | 349 | 14 | 36 | 772 | 27 | 758 | 0.0 | 748 |
| MS.gene063041.t1 | AT5G09730 | 48.469 | 784 | 380 | 14 | 4 | 782 | 9 | 773 | 0.0 | 741 |
| MS.gene063041.t1 | AT5G64570 | 48.793 | 787 | 372 | 14 | 5 | 782 | 20 | 784 | 0.0 | 734 |
| MS.gene063041.t1 | AT1G02640 | 46.947 | 786 | 373 | 12 | 8 | 781 | 6 | 759 | 0.0 | 727 |
| MS.gene063041.t1 | AT5G49360 | 47.564 | 780 | 376 | 17 | 11 | 780 | 14 | 770 | 0.0 | 711 |
| MS.gene063041.t1 | AT5G64570 | 52.151 | 581 | 268 | 8 | 12 | 590 | 20 | 592 | 0.0 | 610 |
| MS.gene063041.t1 | AT5G64570 | 48.986 | 641 | 304 | 11 | 150 | 782 | 1 | 626 | 0.0 | 608 |
| MS.gene063041.t1 | AT5G09700 | 44.990 | 489 | 256 | 7 | 300 | 782 | 45 | 526 | 3.86e-135 | 411 |
| MS.gene063041.t1 | AT3G47040 | 27.019 | 644 | 372 | 26 | 50 | 641 | 10 | 607 | 4.67e-43 | 166 |
| MS.gene063041.t1 | AT3G47010 | 26.677 | 626 | 363 | 27 | 47 | 613 | 8 | 596 | 4.49e-41 | 160 |
| MS.gene063041.t1 | AT3G47040 | 26.324 | 661 | 380 | 27 | 50 | 641 | 10 | 632 | 2.17e-40 | 158 |
| MS.gene063041.t1 | AT3G47000 | 26.480 | 642 | 372 | 25 | 50 | 638 | 10 | 604 | 1.35e-39 | 155 |
| MS.gene063041.t1 | AT3G47010 | 26.518 | 626 | 363 | 28 | 47 | 613 | 8 | 595 | 1.66e-39 | 155 |
| MS.gene063041.t1 | AT3G47050 | 26.885 | 610 | 351 | 23 | 46 | 597 | 6 | 578 | 4.68e-38 | 151 |
| MS.gene063041.t1 | AT5G04885 | 24.960 | 625 | 363 | 24 | 56 | 617 | 36 | 617 | 1.48e-35 | 144 |
| MS.gene063041.t1 | AT5G04885 | 24.960 | 625 | 363 | 24 | 56 | 617 | 36 | 617 | 1.48e-35 | 144 |
| MS.gene063041.t1 | AT5G04885 | 24.960 | 625 | 363 | 24 | 56 | 617 | 53 | 634 | 1.48e-35 | 144 |
| MS.gene063041.t1 | AT3G47040 | 29.885 | 435 | 238 | 17 | 50 | 436 | 10 | 425 | 3.41e-34 | 137 |
| MS.gene063041.t1 | AT5G20950 | 28.019 | 414 | 227 | 16 | 60 | 424 | 36 | 427 | 6.01e-32 | 132 |
| MS.gene063041.t1 | AT5G20950 | 28.019 | 414 | 227 | 16 | 60 | 424 | 36 | 427 | 6.01e-32 | 132 |
| MS.gene063041.t1 | AT3G47000 | 29.078 | 423 | 232 | 16 | 50 | 424 | 10 | 412 | 6.23e-32 | 130 |
| MS.gene063041.t1 | AT5G20950 | 28.019 | 414 | 227 | 16 | 60 | 424 | 114 | 505 | 7.83e-32 | 132 |
| MS.gene063041.t1 | AT3G47010 | 27.938 | 451 | 251 | 19 | 47 | 448 | 8 | 433 | 2.62e-31 | 128 |
| MS.gene063041.t1 | AT3G47040 | 25.298 | 672 | 381 | 29 | 50 | 641 | 10 | 640 | 3.16e-31 | 130 |
| MS.gene063041.t1 | AT5G20940 | 26.724 | 580 | 327 | 24 | 86 | 637 | 112 | 621 | 1.42e-30 | 128 |
| MS.gene063041.t1 | AT3G62710 | 25.896 | 614 | 347 | 28 | 62 | 637 | 105 | 648 | 7.15e-30 | 126 |
| MS.gene063041.t1 | AT3G47010 | 26.637 | 443 | 270 | 21 | 196 | 613 | 5 | 417 | 2.51e-26 | 113 |
| MS.gene063041.t1 | AT3G47050 | 27.467 | 375 | 214 | 12 | 46 | 377 | 6 | 365 | 1.24e-24 | 107 |
| MS.gene063041.t1 | AT3G47000 | 25.758 | 462 | 289 | 19 | 194 | 638 | 3 | 427 | 4.70e-24 | 106 |
Find 192 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAATTGGAGGGATTATT+TGG | 0.068417 | 5.3:-49272387 | MS.gene063041:CDS |
| AACAACCTTAGATGATTTAT+TGG | 0.151178 | 5.3:+49272753 | None:intergenic |
| AATAAGTGATTATGTTATTT+TGG | 0.156153 | 5.3:-49272581 | MS.gene063041:CDS |
| CACCAAACATAAATATATTT+AGG | 0.186343 | 5.3:-49275821 | MS.gene063041:CDS |
| GCTAAGAATAATGACAAAAT+TGG | 0.212120 | 5.3:-49272400 | MS.gene063041:CDS |
| TTTCCATTTCTACCTTTCTT+TGG | 0.223144 | 5.3:+49271084 | None:intergenic |
| TTCTAAGAAGCCGATTATTT+TGG | 0.224961 | 5.3:-49272458 | MS.gene063041:CDS |
| TTTGAAGGTGGGAAACTAAT+TGG | 0.232375 | 5.3:-49275699 | MS.gene063041:CDS |
| AAATTGTAATCTGCACAATT+TGG | 0.238972 | 5.3:+49274593 | None:intergenic |
| ACACTTTACTGCTTATGATT+TGG | 0.254536 | 5.3:-49275646 | MS.gene063041:CDS |
| AAGCTCAAGGGATGACGTTT+TGG | 0.256760 | 5.3:-49275845 | MS.gene063041:CDS |
| TAGCCGAATTCGTAGACTTT+TGG | 0.273287 | 5.3:+49271339 | None:intergenic |
| TCTTGTCCTCTTCCCCATCT+TGG | 0.274411 | 5.3:+49275795 | None:intergenic |
| GTAAATACCCTTGGAGTTAT+AGG | 0.279725 | 5.3:-49272784 | MS.gene063041:CDS |
| TCAGGTTACTTTGCAAGATT+TGG | 0.289491 | 5.3:-49274705 | MS.gene063041:intron |
| CTGATTCGGTACCAAAGTTT+AGG | 0.291395 | 5.3:+49276223 | None:intergenic |
| TAGATGATTTATTGGCATTA+GGG | 0.300640 | 5.3:+49272761 | None:intergenic |
| TCTTTAGAGCATACTTGATT+TGG | 0.301730 | 5.3:+49272889 | None:intergenic |
| TTAGATGATTTATTGGCATT+AGG | 0.311930 | 5.3:+49272760 | None:intergenic |
| AGATTAGTACCAATATTAAA+AGG | 0.321384 | 5.3:-49272703 | MS.gene063041:CDS |
| CGAGTTGGTGGTAGCGAGTT+AGG | 0.322220 | 5.3:+49276569 | None:intergenic |
| AATCGGCTTCTTAGAAGCTT+TGG | 0.334665 | 5.3:+49272465 | None:intergenic |
| CTTGTCCTCTTCCCCATCTT+GGG | 0.341529 | 5.3:+49275796 | None:intergenic |
| TTAAATTGTATGTAGGTGAT+TGG | 0.341926 | 5.3:-49275900 | MS.gene063041:intron |
| CTGCTTATGATTTGGATCAT+TGG | 0.343564 | 5.3:-49275638 | MS.gene063041:CDS |
| TACAAACTTGTTTCAGAGTT+AGG | 0.348701 | 5.3:-49271204 | MS.gene063041:CDS |
| CACAAAATTACCAAAATAAT+CGG | 0.360184 | 5.3:+49272448 | None:intergenic |
| TATCGTTCTGGATGTCTTGA+TGG | 0.362209 | 5.3:-49272652 | MS.gene063041:CDS |
| TCCCTAAATATATTTATGTT+TGG | 0.363155 | 5.3:+49275819 | None:intergenic |
| TGTACTATGCAACTATGAAA+TGG | 0.363228 | 5.3:+49274665 | None:intergenic |
| TTTGGATCATTGGAAGGGTT+TGG | 0.364911 | 5.3:-49275628 | MS.gene063041:CDS |
| TAATGCCAATAAATCATCTA+AGG | 0.365139 | 5.3:-49272758 | MS.gene063041:CDS |
| GTACTATGCAACTATGAAAT+GGG | 0.369757 | 5.3:+49274666 | None:intergenic |
| TGGTGGAAGGGCTCTTGCTC+AGG | 0.371596 | 5.3:-49272344 | MS.gene063041:CDS |
| AGCCAAACACATTATCGTTC+TGG | 0.371977 | 5.3:-49272664 | MS.gene063041:CDS |
| GGAGGTGGAAAGGGTGAAGT+TGG | 0.374363 | 5.3:-49271018 | MS.gene063041:CDS |
| AAACTACAATATGGCACAAT+TGG | 0.375303 | 5.3:-49272913 | MS.gene063041:CDS |
| GCTCTTGCTCAGGTTGTGTT+TGG | 0.377174 | 5.3:-49272334 | MS.gene063041:CDS |
| CAAAATTGGAGGGATTATTT+GGG | 0.380232 | 5.3:-49272386 | MS.gene063041:CDS |
| GCAAATACTGGAAGCATGGC+TGG | 0.385284 | 5.3:-49271135 | MS.gene063041:CDS |
| CTTCAAGGAGATTCCTTTGA+AGG | 0.385860 | 5.3:-49275714 | MS.gene063041:CDS |
| AATCCAACCAAACTACAATA+TGG | 0.391870 | 5.3:-49272922 | MS.gene063041:CDS |
| ACCAAACATAAATATATTTA+GGG | 0.398770 | 5.3:-49275820 | MS.gene063041:CDS |
| AATTGTGCCATATTGTAGTT+TGG | 0.399584 | 5.3:+49272915 | None:intergenic |
| TTGGTGGTGTCACAGGAGTA+TGG | 0.402961 | 5.3:+49276517 | None:intergenic |
| CAAGCCTAGTCTTATTCTAA+TGG | 0.410715 | 5.3:+49272954 | None:intergenic |
| ACTCCAAGGGTATTTACTCT+TGG | 0.414446 | 5.3:+49272790 | None:intergenic |
| AGATTGAATGGTAGTGTTGC+AGG | 0.418124 | 5.3:-49276292 | MS.gene063041:CDS |
| AACCCTACCAACTGTTTCAC+TGG | 0.418928 | 5.3:+49271060 | None:intergenic |
| AGGTGGTTATTTGTTGGTTG+TGG | 0.420306 | 5.3:-49270929 | MS.gene063041:CDS |
| ACATTGGGAATTGCAAATAC+TGG | 0.422016 | 5.3:-49271147 | MS.gene063041:CDS |
| GTGTTTGGTGACTATAACCC+AGG | 0.425278 | 5.3:-49272319 | MS.gene063041:intron |
| ATAAGACTAGGCTTGTTTGA+TGG | 0.425928 | 5.3:-49272946 | MS.gene063041:CDS |
| ATTATTTGGGCTGGTTATCC+TGG | 0.427506 | 5.3:-49272373 | MS.gene063041:CDS |
| AGGAATAATTTGAGTAGCTT+AGG | 0.431887 | 5.3:+49271313 | None:intergenic |
| GGTCCAAAAGTCTACGAATT+CGG | 0.432398 | 5.3:-49271342 | MS.gene063041:CDS |
| ATCCAGAACGATAATGTGTT+TGG | 0.439275 | 5.3:+49272662 | None:intergenic |
| AAGCCAAAGAAAGGTAGAAA+TGG | 0.439382 | 5.3:-49271087 | MS.gene063041:CDS |
| TCCTATGTAAGAGGACTTCA+AGG | 0.442093 | 5.3:-49275729 | MS.gene063041:CDS |
| CTCATTCTCATGTCTGTCAT+TGG | 0.443342 | 5.3:+49271414 | None:intergenic |
| TTTGAGAGTGTGACGGTGGA+AGG | 0.447503 | 5.3:-49271039 | MS.gene063041:CDS |
| CTTCCTTTGATCCTAAACTT+TGG | 0.447982 | 5.3:-49276234 | MS.gene063041:CDS |
| TGAAGAAGGTGGTTATTTGT+TGG | 0.451987 | 5.3:-49270935 | MS.gene063041:CDS |
| TATGCTGTTTCCTATGTAAG+AGG | 0.453127 | 5.3:-49275738 | MS.gene063041:CDS |
| TTGCTCTTTGAGTGATGGTA+AGG | 0.457578 | 5.3:+49276458 | None:intergenic |
| ATAAGTTCTTGCTGCTTACC+AGG | 0.458334 | 5.3:+49272499 | None:intergenic |
| AGTTACTAACCTTACTGATT+CGG | 0.458447 | 5.3:+49276209 | None:intergenic |
| AATTAGTTTCCCACCTTCAA+AGG | 0.461085 | 5.3:+49275701 | None:intergenic |
| ATGTCGATTTCTGTCACATT+GGG | 0.462961 | 5.3:-49271162 | MS.gene063041:CDS |
| TAAGACTAGGCTTGTTTGAT+GGG | 0.462964 | 5.3:-49272945 | MS.gene063041:CDS |
| TTAGCAAAAGTAATATCAAC+AGG | 0.467973 | 5.3:+49272418 | None:intergenic |
| ACGGTGGAAGGAGGTGGAAA+GGG | 0.469710 | 5.3:-49271027 | MS.gene063041:CDS |
| TTATTTGTTGGTTGTGGGAG+AGG | 0.471909 | 5.3:-49270923 | MS.gene063041:CDS |
| GCACGGTCGATTTGAGATAT+CGG | 0.478301 | 5.3:+49272994 | None:intergenic |
| TATATTTAGGGACCCAAGAT+GGG | 0.488625 | 5.3:-49275808 | MS.gene063041:CDS |
| GACAGCTGGAGAAGATCCTT+TGG | 0.489521 | 5.3:-49275772 | MS.gene063041:CDS |
| CATGTCGATTTCTGTCACAT+TGG | 0.490000 | 5.3:-49271163 | MS.gene063041:CDS |
| GGTGGTTATTTGTTGGTTGT+GGG | 0.491601 | 5.3:-49270928 | MS.gene063041:CDS |
| GCCCTTCCACCAAGTTCGCC+AGG | 0.492748 | 5.3:+49272355 | None:intergenic |
| CAAGGAGATTCCTTTGAAGG+TGG | 0.495290 | 5.3:-49275711 | MS.gene063041:CDS |
| GCTGGTTATCCTGGCGAACT+TGG | 0.496905 | 5.3:-49272364 | MS.gene063041:CDS |
| GGTGTTGCTAATGCTGGTAA+AGG | 0.497484 | 5.3:-49276319 | MS.gene063041:CDS |
| GTATAGAATGAGTGGTTGAT+TGG | 0.501080 | 5.3:+49271250 | None:intergenic |
| GGTTATCCTGGCGAACTTGG+TGG | 0.501374 | 5.3:-49272361 | MS.gene063041:CDS |
| GTGTTGCTAATGCTGGTAAA+GGG | 0.502533 | 5.3:-49276318 | MS.gene063041:CDS |
| GGTTACTTTGCAAGATTTGG+CGG | 0.503836 | 5.3:-49274702 | MS.gene063041:CDS |
| CTGTTTGTGAAGCCAAAGAA+AGG | 0.504938 | 5.3:-49271096 | MS.gene063041:CDS |
| GACGGTGGAAGGAGGTGGAA+AGG | 0.507657 | 5.3:-49271028 | MS.gene063041:CDS |
| TTATGATTTGGATCATTGGA+AGG | 0.509513 | 5.3:-49275634 | MS.gene063041:CDS |
| AAGAATAATGACAAAATTGG+AGG | 0.510297 | 5.3:-49272397 | MS.gene063041:CDS |
| ATGAGAGCTGATCCATCATC+AGG | 0.511303 | 5.3:-49271396 | MS.gene063041:CDS |
| AGGGATGATTTAGAGTTGCC+TGG | 0.511323 | 5.3:-49272517 | MS.gene063041:CDS |
| GTAGAAACGGTAGGTTCTAC+CGG | 0.511605 | 5.3:+49271368 | None:intergenic |
| GTACCAAAGTTTAGGATCAA+AGG | 0.513099 | 5.3:+49276231 | None:intergenic |
| CGGTATACCGAGTCGAGGAA+TGG | 0.513844 | 5.3:+49276372 | None:intergenic |
| GGTAAAGGGATAAGATTGAA+TGG | 0.517556 | 5.3:-49276304 | MS.gene063041:CDS |
| CTACCGGGATAGCCTGATGA+TGG | 0.517596 | 5.3:+49271384 | None:intergenic |
| TGGTTGATTGGTTGATGTGA+AGG | 0.520554 | 5.3:+49271262 | None:intergenic |
| ACATCAGCTACAGCATCCTC+TGG | 0.521946 | 5.3:+49274033 | None:intergenic |
| CAGCTTCAAGAGCAACGTCT+AGG | 0.524868 | 5.3:+49272863 | None:intergenic |
| AAGTGGGTTGGTGGTGTCAC+AGG | 0.526196 | 5.3:+49276510 | None:intergenic |
| ATATATTTAGGGACCCAAGA+TGG | 0.528065 | 5.3:-49275809 | MS.gene063041:CDS |
| TGTGCTTACAACCGTGTCAA+TGG | 0.530376 | 5.3:-49274620 | MS.gene063041:CDS |
| CTTCCAAGAGTAAATACCCT+TGG | 0.531258 | 5.3:-49272793 | MS.gene063041:CDS |
| ACTTTGGTACCGAATCAGTA+AGG | 0.534412 | 5.3:-49276218 | MS.gene063041:intron |
| ATACCGAGTCGAGGAATGGC+AGG | 0.534851 | 5.3:+49276376 | None:intergenic |
| AGGTACATGAGTTGGTGAAT+CGG | 0.536822 | 5.3:+49276540 | None:intergenic |
| AAAGTCTACGAATTCGGCTA+TGG | 0.537086 | 5.3:-49271336 | MS.gene063041:CDS |
| AAGAGAGGGAATCACGCGAT+AGG | 0.539538 | 5.3:-49272537 | MS.gene063041:CDS |
| AGGGTATTTACTCTTGGAAG+CGG | 0.539975 | 5.3:+49272796 | None:intergenic |
| ATCCTGGCGAACTTGGTGGA+AGG | 0.540336 | 5.3:-49272357 | MS.gene063041:CDS |
| TTTGACAGAAATGAAGCTGT+AGG | 0.540446 | 5.3:+49271293 | None:intergenic |
| ATCCAGTGAAACAGTTGGTA+GGG | 0.542668 | 5.3:-49271062 | MS.gene063041:CDS |
| GATCCATCATCAGGCTATCC+CGG | 0.542828 | 5.3:-49271387 | MS.gene063041:CDS |
| GTGCCATATTGTAGTTTGGT+TGG | 0.544330 | 5.3:+49272919 | None:intergenic |
| GGCTTCACAAACAGCAACAC+AGG | 0.545539 | 5.3:+49271105 | None:intergenic |
| AGAATCATATATGATAATCA+AGG | 0.545803 | 5.3:-49274069 | MS.gene063041:CDS |
| TCTTGGAAGCGGGAGAATTG+AGG | 0.545957 | 5.3:+49272807 | None:intergenic |
| GGTGTCAAGGTGGTTGAAGA+AGG | 0.548262 | 5.3:-49270949 | MS.gene063041:CDS |
| ATTGGAGGGATTATTTGGGC+TGG | 0.549271 | 5.3:-49272382 | MS.gene063041:CDS |
| TACAATGCTGGACAAGCTCA+AGG | 0.550917 | 5.3:-49275858 | MS.gene063041:CDS |
| AAGGAGATTCCTTTGAAGGT+GGG | 0.551664 | 5.3:-49275710 | MS.gene063041:CDS |
| AGAGAGGGAATCACGCGATA+GGG | 0.553307 | 5.3:-49272536 | MS.gene063041:CDS |
| GGAAGAGGACAAGAGACAGC+TGG | 0.554566 | 5.3:-49275786 | MS.gene063041:CDS |
| GGGTATTTACTCTTGGAAGC+GGG | 0.555910 | 5.3:+49272797 | None:intergenic |
| AATGGTGAATAGATTGTGTA+GGG | 0.557476 | 5.3:+49272972 | None:intergenic |
| TTTCATAGTTGCATAGTACA+AGG | 0.561138 | 5.3:-49274662 | MS.gene063041:CDS |
| AATCCAGTGAAACAGTTGGT+AGG | 0.561271 | 5.3:-49271063 | MS.gene063041:CDS |
| GCAAGAGGAGTATACAATGC+TGG | 0.561312 | 5.3:-49275870 | MS.gene063041:CDS |
| AGAGATGAAAGCAATGGTGA+TGG | 0.561678 | 5.3:+49276606 | None:intergenic |
| AATATTGGTACTAATCTACA+AGG | 0.562148 | 5.3:+49272709 | None:intergenic |
| GTTGAGATTGCAGAATGGAA+AGG | 0.562893 | 5.3:+49276480 | None:intergenic |
| AGGGACCCAAGATGGGGAAG+AGG | 0.563005 | 5.3:-49275801 | MS.gene063041:CDS |
| TCGGTATACCGAGTTATCAA+TGG | 0.563582 | 5.3:-49276360 | MS.gene063041:CDS |
| TCCTTGAAGTCCTCTTACAT+AGG | 0.571602 | 5.3:+49275728 | None:intergenic |
| GCTCTTGAAGCTGCAAGAAG+TGG | 0.571675 | 5.3:-49272853 | MS.gene063041:CDS |
| CAAATACTGGAAGCATGGCT+GGG | 0.572025 | 5.3:-49271134 | MS.gene063041:CDS |
| TCATCCCACCATTGATAACT+CGG | 0.573649 | 5.3:+49276352 | None:intergenic |
| GAGAGTGTGACGGTGGAAGG+AGG | 0.575492 | 5.3:-49271036 | MS.gene063041:CDS |
| TAATGGTGAATAGATTGTGT+AGG | 0.575658 | 5.3:+49272971 | None:intergenic |
| TGGACCTGTGTAGAAACGGT+AGG | 0.576368 | 5.3:+49271359 | None:intergenic |
| TATGATTTGGATCATTGGAA+GGG | 0.576733 | 5.3:-49275633 | MS.gene063041:CDS |
| AGTGTGACGGTGGAAGGAGG+TGG | 0.578214 | 5.3:-49271033 | MS.gene063041:CDS |
| TCCTGGCGAACTTGGTGGAA+GGG | 0.579528 | 5.3:-49272356 | MS.gene063041:CDS |
| AGCAAATGAGAGTGGTGTCA+AGG | 0.581128 | 5.3:-49270962 | MS.gene063041:CDS |
| CATTGTGTCACGGCTCACAT+TGG | 0.582035 | 5.3:-49276431 | MS.gene063041:CDS |
| TTGCACGGTGTTGCTAATGC+TGG | 0.589612 | 5.3:-49276325 | MS.gene063041:CDS |
| ACTCTGAAACAAGTTTGTAA+CGG | 0.590668 | 5.3:+49271208 | None:intergenic |
| AATCGGCATGAACGAGTTGG+TGG | 0.594003 | 5.3:+49276557 | None:intergenic |
| GTAGCTGATGTACTTCAAGC+TGG | 0.594292 | 5.3:-49274021 | MS.gene063041:intron |
| CATTAGGGCCTATAACTCCA+AGG | 0.594911 | 5.3:+49272776 | None:intergenic |
| TACTATGCAACTATGAAATG+GGG | 0.595239 | 5.3:+49274667 | None:intergenic |
| AATGAAAGAGATGAAAGCAA+TGG | 0.596045 | 5.3:+49276600 | None:intergenic |
| AGAATAATGACAAAATTGGA+GGG | 0.611667 | 5.3:-49272396 | MS.gene063041:CDS |
| AGAACCTACCGTTTCTACAC+AGG | 0.612051 | 5.3:-49271363 | MS.gene063041:CDS |
| GTCAAGGTGGTTGAAGAAGG+TGG | 0.614362 | 5.3:-49270946 | MS.gene063041:CDS |
| GAGTATGGAGGTACATGAGT+TGG | 0.615620 | 5.3:+49276532 | None:intergenic |
| TGGAAATCCAGTGAAACAGT+TGG | 0.620701 | 5.3:-49271067 | MS.gene063041:CDS |
| GTATACCGAGTTATCAATGG+TGG | 0.623082 | 5.3:-49276357 | MS.gene063041:CDS |
| GCTCCTGCCATTCCTCGACT+CGG | 0.625159 | 5.3:-49276379 | MS.gene063041:CDS |
| TGAATAGATTGTGTAGGGCA+CGG | 0.634890 | 5.3:+49272977 | None:intergenic |
| GGTAGGGTTTGAGAGTGTGA+CGG | 0.635292 | 5.3:-49271046 | MS.gene063041:CDS |
| ATTGGATCAAAGTCAAGAGA+GGG | 0.636383 | 5.3:-49272551 | MS.gene063041:CDS |
| TCAGGGATGGATGTAGAGTG+TGG | 0.638212 | 5.3:-49273066 | MS.gene063041:intron |
| AATTTGGAACTCCATTGACA+CGG | 0.638503 | 5.3:+49274609 | None:intergenic |
| AGGGTTTGAGAGTGTGACGG+TGG | 0.638866 | 5.3:-49271043 | MS.gene063041:CDS |
| ATAGTACAAGGACGGTCTAG+TGG | 0.639813 | 5.3:-49274650 | MS.gene063041:CDS |
| CAATGTGACAGAAATCGACA+TGG | 0.640085 | 5.3:+49271164 | None:intergenic |
| TAAAATCAGGTATATTACGT+CGG | 0.641041 | 5.3:-49274106 | MS.gene063041:intron |
| GTAAGGTTGAGATTGCAGAA+TGG | 0.642723 | 5.3:+49276475 | None:intergenic |
| AATTGCAAATACTGGAAGCA+TGG | 0.643013 | 5.3:-49271139 | MS.gene063041:CDS |
| GTGAATCGGCATGAACGAGT+TGG | 0.643992 | 5.3:+49276554 | None:intergenic |
| GTGATTGGAACTGAGGCAAG+AGG | 0.644411 | 5.3:-49275885 | MS.gene063041:CDS |
| ATAGTTGCATAGTACAAGGA+CGG | 0.645766 | 5.3:-49274658 | MS.gene063041:CDS |
| TAGAAACGGTAGGTTCTACC+GGG | 0.648311 | 5.3:+49271369 | None:intergenic |
| CTTAGTAGAGCAAATGAGAG+TGG | 0.648348 | 5.3:-49270970 | MS.gene063041:CDS |
| GAGCAAAAGACATTGTGTCA+CGG | 0.656445 | 5.3:-49276441 | MS.gene063041:CDS |
| TTACTTGACAAAGCATGCAA+AGG | 0.657304 | 5.3:-49273040 | MS.gene063041:CDS |
| GATTGGATCAAAGTCAAGAG+AGG | 0.658616 | 5.3:-49272552 | MS.gene063041:CDS |
| ATTAGGGCCTATAACTCCAA+GGG | 0.662705 | 5.3:+49272777 | None:intergenic |
| ACAATGCTGGACAAGCTCAA+GGG | 0.664494 | 5.3:-49275857 | MS.gene063041:CDS |
| TTGGTACTAATCTACAAGGA+CGG | 0.668059 | 5.3:+49272713 | None:intergenic |
| TATACCGAGTTATCAATGGT+GGG | 0.671346 | 5.3:-49276356 | MS.gene063041:CDS |
| TGGTGGGATGAAGCGTTGCA+CGG | 0.676038 | 5.3:-49276340 | MS.gene063041:CDS |
| TATGTAGGTGATTGGAACTG+AGG | 0.676313 | 5.3:-49275892 | MS.gene063041:intron |
| ATATTTAGGGACCCAAGATG+GGG | 0.681751 | 5.3:-49275807 | MS.gene063041:CDS |
| TTCACCATTAGAATAAGACT+AGG | 0.688029 | 5.3:-49272958 | MS.gene063041:CDS |
| TAACTCGGTATACCGAGTCG+AGG | 0.711678 | 5.3:+49276367 | None:intergenic |
| GTGGTGTCACAGGAGTATGG+AGG | 0.712071 | 5.3:+49276520 | None:intergenic |
| GCAGCAGTAAGAATAACTTG+AGG | 0.719067 | 5.3:+49276256 | None:intergenic |
| AAATGAGAGTGGTGTCAAGG+TGG | 0.736902 | 5.3:-49270959 | MS.gene063041:CDS |
| ACTATGCAACTATGAAATGG+GGG | 0.744455 | 5.3:+49274668 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTATTTTATATT+GGG | - | chr5.3:49275561-49275580 | MS.gene063041:intron | 0.0% |
| !!! | TAATTTTTTTTATTTTATAT+TGG | - | chr5.3:49275560-49275579 | MS.gene063041:intron | 0.0% |
| !! | ACAAAATTGAAATAATTATA+AGG | + | chr5.3:49273021-49273040 | None:intergenic | 10.0% |
| !! | ATATTGTTTAATTCTTATAA+GGG | + | chr5.3:49273173-49273192 | None:intergenic | 10.0% |
| !! | CAAAATTGAAATAATTATAA+GGG | + | chr5.3:49273020-49273039 | None:intergenic | 10.0% |
| !! | TATATTGTTTAATTCTTATA+AGG | + | chr5.3:49273174-49273193 | None:intergenic | 10.0% |
| !!! | AATATGAGATTTTATTTTTT+TGG | - | chr5.3:49273566-49273585 | MS.gene063041:intron | 10.0% |
| !! | AATATTTAGTTAAGCAAAAA+GGG | - | chr5.3:49275529-49275548 | MS.gene063041:intron | 15.0% |
| !! | ACCAAACATAAATATATTTA+GGG | - | chr5.3:49271693-49271712 | MS.gene063041:intron | 15.0% |
| !! | AGTACTATTTATTATAATCA+AGG | - | chr5.3:49274396-49274415 | MS.gene063041:intron | 15.0% |
| !! | ATCTTAATTAAATTGTATGT+AGG | - | chr5.3:49271606-49271625 | MS.gene063041:intron | 15.0% |
| !! | GAAATTAAAAAATGACAAAT+AGG | - | chr5.3:49272480-49272499 | MS.gene063041:CDS | 15.0% |
| !! | TAATATTTAGTTAAGCAAAA+AGG | - | chr5.3:49275528-49275547 | MS.gene063041:intron | 15.0% |
| !! | TATTGTTTAATTCTTATAAG+GGG | + | chr5.3:49273172-49273191 | None:intergenic | 15.0% |
| !!! | AAAATGTAAATTTTATACGA+AGG | - | chr5.3:49273144-49273163 | MS.gene063041:intron | 15.0% |
| !!! | AATAAGTGATTATGTTATTT+TGG | - | chr5.3:49274932-49274951 | MS.gene063041:intron | 15.0% |
| !!! | AGTTTAAAGATTTTAGTTTT+TGG | - | chr5.3:49271400-49271419 | MS.gene063041:CDS | 15.0% |
| !!! | CTTATTTATAAGAGAAATTT+TGG | - | chr5.3:49272149-49272168 | MS.gene063041:intron | 15.0% |
| !!! | GATTAATAAGAATGATTTTT+TGG | - | chr5.3:49273381-49273400 | MS.gene063041:intron | 15.0% |
| !!! | TATTAAATCAACTATTCTTT+TGG | + | chr5.3:49272458-49272477 | None:intergenic | 15.0% |
| !! | AAAAATAAGTATGAGGTAAA+GGG | + | chr5.3:49273830-49273849 | None:intergenic | 20.0% |
| !! | AAATGTAGAAATGATATTTG+AGG | - | chr5.3:49272087-49272106 | MS.gene063041:intron | 20.0% |
| !! | AACTAAAATGCAAAATGATA+AGG | + | chr5.3:49274046-49274065 | None:intergenic | 20.0% |
| !! | AACTATTATTACTCAACTAA+TGG | - | chr5.3:49275998-49276017 | MS.gene063041:intron | 20.0% |
| !! | AATTCAAAATGTGAAACAAA+AGG | + | chr5.3:49272610-49272629 | None:intergenic | 20.0% |
| !! | ACAGATAAAAACACATAATA+TGG | - | chr5.3:49275245-49275264 | MS.gene063041:intron | 20.0% |
| !! | ACTATTATTACTCAACTAAT+GGG | - | chr5.3:49275999-49276018 | MS.gene063041:intron | 20.0% |
| !! | AGAATCATATATGATAATCA+AGG | - | chr5.3:49273444-49273463 | MS.gene063041:intron | 20.0% |
| !! | AGATTAGTACCAATATTAAA+AGG | - | chr5.3:49274810-49274829 | MS.gene063041:intron | 20.0% |
| !! | ATATACTTGAAAAAGTTATC+TGG | + | chr5.3:49275970-49275989 | None:intergenic | 20.0% |
| !! | ATTATCTAACTCTATATCAA+TGG | - | chr5.3:49273604-49273623 | MS.gene063041:intron | 20.0% |
| !! | ATTTAGTTGTGTTTACTAAA+TGG | + | chr5.3:49275631-49275650 | None:intergenic | 20.0% |
| !! | ATTTCTCTTATAAATAAGAC+CGG | + | chr5.3:49272147-49272166 | None:intergenic | 20.0% |
| !! | CACAAAATTACCAAAATAAT+CGG | + | chr5.3:49275068-49275087 | None:intergenic | 20.0% |
| !! | CACATAATATGGTAAAAAAA+TGG | - | chr5.3:49275256-49275275 | MS.gene063041:intron | 20.0% |
| !! | CACCAAACATAAATATATTT+AGG | - | chr5.3:49271692-49271711 | MS.gene063041:intron | 20.0% |
| !! | CTTAAAATGAATTTCAAACA+TGG | + | chr5.3:49271338-49271357 | None:intergenic | 20.0% |
| !! | GTTAATAGATGTATAAACAA+AGG | + | chr5.3:49273533-49273552 | None:intergenic | 20.0% |
| !! | TATACTTGAAAAAGTTATCT+GGG | + | chr5.3:49275969-49275988 | None:intergenic | 20.0% |
| !! | TCAACGAAATTTAATGTATT+TGG | - | chr5.3:49272172-49272191 | MS.gene063041:intron | 20.0% |
| !! | TCCCTAAATATATTTATGTT+TGG | + | chr5.3:49271697-49271716 | None:intergenic | 20.0% |
| !! | TGAAAAACATTGTTTCATAA+AGG | + | chr5.3:49273210-49273229 | None:intergenic | 20.0% |
| !!! | AGAAAATAGTCTTCATTTTA+TGG | + | chr5.3:49275797-49275816 | None:intergenic | 20.0% |
| !!! | AGTTGAGTAATAATAGTTTT+AGG | + | chr5.3:49275996-49276015 | None:intergenic | 20.0% |
| !!! | ATAAGCAATGTTTTAAATTG+TGG | + | chr5.3:49275901-49275920 | None:intergenic | 20.0% |
| !!! | ATTATTTTGGTAATTTTGTG+CGG | - | chr5.3:49275068-49275087 | MS.gene063041:intron | 20.0% |
| !!! | CTAATTGAAAGAAAGTTTTT+AGG | + | chr5.3:49273791-49273810 | None:intergenic | 20.0% |
| !!! | GATTATGTTATTTTGGTTAT+GGG | - | chr5.3:49274939-49274958 | MS.gene063041:intron | 20.0% |
| !!! | GTATTTTGATGAAATCTTTT+GGG | + | chr5.3:49276080-49276099 | None:intergenic | 20.0% |
| !!! | GTGTAAAATCCTTTTAATAT+TGG | + | chr5.3:49274822-49274841 | None:intergenic | 20.0% |
| !!! | TGATTATGTTATTTTGGTTA+TGG | - | chr5.3:49274938-49274957 | MS.gene063041:intron | 20.0% |
| ! | AAACTAAACAAACAAGAACT+TGG | + | chr5.3:49272561-49272580 | None:intergenic | 25.0% |
| ! | AAATAGTACTTGTGTATGTT+TGG | + | chr5.3:49274386-49274405 | None:intergenic | 25.0% |
| ! | AAATATGTAGCTTCAAAAAG+AGG | + | chr5.3:49273309-49273328 | None:intergenic | 25.0% |
| ! | AAATTGTAATCTGCACAATT+TGG | + | chr5.3:49272923-49272942 | None:intergenic | 25.0% |
| ! | AACAACCTTAGATGATTTAT+TGG | + | chr5.3:49274763-49274782 | None:intergenic | 25.0% |
| ! | AAGAATAATGACAAAATTGG+AGG | - | chr5.3:49275116-49275135 | MS.gene063041:intron | 25.0% |
| ! | AATATTGGTACTAATCTACA+AGG | + | chr5.3:49274807-49274826 | None:intergenic | 25.0% |
| ! | ACGGATTTGGATTATTTAAA+TGG | + | chr5.3:49272779-49272798 | None:intergenic | 25.0% |
| ! | AGAATAATGACAAAATTGGA+GGG | - | chr5.3:49275117-49275136 | MS.gene063041:intron | 25.0% |
| ! | AGACAAAAATGGAATTTCAA+TGG | - | chr5.3:49272959-49272978 | MS.gene063041:CDS | 25.0% |
| ! | AGTAACCTGAATTATTAGAA+CGG | + | chr5.3:49272798-49272817 | None:intergenic | 25.0% |
| ! | ATCACGAGAATTAAAAAAGT+TGG | - | chr5.3:49273895-49273914 | MS.gene063041:intron | 25.0% |
| ! | ATGTATAAACTTCGTAGATT+TGG | - | chr5.3:49275481-49275500 | MS.gene063041:intron | 25.0% |
| ! | CAATTATCTTTAGTCATGTT+AGG | - | chr5.3:49272424-49272443 | MS.gene063041:CDS | 25.0% |
| ! | CCAAACATTCTCTTATAAAT+AGG | - | chr5.3:49272231-49272250 | MS.gene063041:intron | 25.0% |
| ! | CCTATTTATAAGAGAATGTT+TGG | + | chr5.3:49272234-49272253 | None:intergenic | 25.0% |
| ! | GAAAAATAAGTATGAGGTAA+AGG | + | chr5.3:49273831-49273850 | None:intergenic | 25.0% |
| ! | GACAAAAATGGAATTTCAAT+GGG | - | chr5.3:49272960-49272979 | MS.gene063041:CDS | 25.0% |
| ! | GCTAAGAATAATGACAAAAT+TGG | - | chr5.3:49275113-49275132 | MS.gene063041:intron | 25.0% |
| ! | GCTCTTACAAATTACAAAAT+TGG | - | chr5.3:49273068-49273087 | MS.gene063041:intron | 25.0% |
| ! | TAAAATCAGGTATATTACGT+CGG | - | chr5.3:49273407-49273426 | MS.gene063041:intron | 25.0% |
| ! | TAATGCCAATAAATCATCTA+AGG | - | chr5.3:49274755-49274774 | MS.gene063041:intron | 25.0% |
| ! | TAGATGATTTATTGGCATTA+GGG | + | chr5.3:49274755-49274774 | None:intergenic | 25.0% |
| ! | TGGATCAATCTTAATTATCA+TGG | + | chr5.3:49274124-49274143 | None:intergenic | 25.0% |
| ! | TTAAATTGTATGTAGGTGAT+TGG | - | chr5.3:49271613-49271632 | MS.gene063041:intron | 25.0% |
| ! | TTAGATGATTTATTGGCATT+AGG | + | chr5.3:49274756-49274775 | None:intergenic | 25.0% |
| ! | TTAGCAAAAGTAATATCAAC+AGG | + | chr5.3:49275098-49275117 | None:intergenic | 25.0% |
| ! | TTTCTCTTATAAATAAGACC+GGG | + | chr5.3:49272146-49272165 | None:intergenic | 25.0% |
| !! | AAAAGTTCACTTTCACATTT+TGG | + | chr5.3:49273347-49273366 | None:intergenic | 25.0% |
| !! | AATGTTTTTCACTCTATTGA+AGG | - | chr5.3:49273219-49273238 | MS.gene063041:intron | 25.0% |
| !! | AGTAAGTTTTCTTTTCTCTA+TGG | - | chr5.3:49271930-49271949 | MS.gene063041:intron | 25.0% |
| !! | CGAAGTTTATACATGTTTTA+AGG | + | chr5.3:49275475-49275494 | None:intergenic | 25.0% |
| !! | CTTTTGCATCAAAATCAAAA+CGG | + | chr5.3:49271912-49271931 | None:intergenic | 25.0% |
| !! | GGGAATGGATATAATAATTT+TGG | + | chr5.3:49275949-49275968 | None:intergenic | 25.0% |
| !! | TATTTTATATTGGGAGACAA+GGG | - | chr5.3:49275570-49275589 | MS.gene063041:intron | 25.0% |
| !! | TGTCTTAATTTTACACAATG+TGG | - | chr5.3:49274173-49274192 | MS.gene063041:intron | 25.0% |
| !! | TTGTGTAATCAAACTTTTCA+GGG | - | chr5.3:49274430-49274449 | MS.gene063041:intron | 25.0% |
| !!! | AAATCATCTAAGGTTGTTTT+AGG | - | chr5.3:49274765-49274784 | MS.gene063041:intron | 25.0% |
| !!! | AGTATGCTATTTAATTTGCT+TGG | + | chr5.3:49273689-49273708 | None:intergenic | 25.0% |
| !!! | ATGCTTTGTTATTTAATCAC+TGG | - | chr5.3:49276022-49276041 | MS.gene063041:intron | 25.0% |
| !!! | CATTTTAGTTGTTTAAGTTC+TGG | - | chr5.3:49274000-49274019 | MS.gene063041:intron | 25.0% |
| !!! | GATTTTTTGGTGTTAAAATC+AGG | - | chr5.3:49273394-49273413 | MS.gene063041:intron | 25.0% |
| !!! | GCATATTTTGAATTTACCAA+AGG | + | chr5.3:49271760-49271779 | None:intergenic | 25.0% |
| !!! | GGTATTTTGATGAAATCTTT+TGG | + | chr5.3:49276081-49276100 | None:intergenic | 25.0% |
| !!! | TATACATGTTTTAAGGATCT+TGG | + | chr5.3:49275468-49275487 | None:intergenic | 25.0% |
| !!! | TATGTGTTTTTATCTGTCAA+TGG | + | chr5.3:49275242-49275261 | None:intergenic | 25.0% |
| !!! | TTAACAAAAGTTGATGTATC+TGG | + | chr5.3:49272211-49272230 | None:intergenic | 25.0% |
| !!! | TTATTTTATATTGGGAGACA+AGG | - | chr5.3:49275569-49275588 | MS.gene063041:intron | 25.0% |
| AAACTACAATATGGCACAAT+TGG | - | chr5.3:49274600-49274619 | MS.gene063041:CDS | 30.0% | |
| AATCCAACCAAACTACAATA+TGG | - | chr5.3:49274591-49274610 | MS.gene063041:CDS | 30.0% | |
| AATGAAAGAGATGAAAGCAA+TGG | + | chr5.3:49270916-49270935 | None:intergenic | 30.0% | |
| AATGGTGAATAGATTGTGTA+GGG | + | chr5.3:49274544-49274563 | None:intergenic | 30.0% | |
| AATTGTGCCATATTGTAGTT+TGG | + | chr5.3:49274601-49274620 | None:intergenic | 30.0% | |
| ACAAAATTGGAGGGATTATT+TGG | - | chr5.3:49275126-49275145 | MS.gene063041:intron | 30.0% | |
| ACACTTTACTGCTTATGATT+TGG | - | chr5.3:49271867-49271886 | MS.gene063041:intron | 30.0% | |
| ACCATAAAAATTAGAGTGCA+TGG | + | chr5.3:49274144-49274163 | None:intergenic | 30.0% | |
| ACGAAACTAAAAGACAAATC+AGG | + | chr5.3:49272286-49272305 | None:intergenic | 30.0% | |
| AGGAATAATTTGAGTAGCTT+AGG | + | chr5.3:49276203-49276222 | None:intergenic | 30.0% | |
| CAAAATTGGAGGGATTATTT+GGG | - | chr5.3:49275127-49275146 | MS.gene063041:intron | 30.0% | |
| CAAATCCGTTCTAATAATTC+AGG | - | chr5.3:49272790-49272809 | MS.gene063041:CDS | 30.0% | |
| CATTCTCTTATAAATAGGAC+CGG | - | chr5.3:49272236-49272255 | MS.gene063041:intron | 30.0% | |
| CTCTCAGAAAAATAAGTATG+AGG | + | chr5.3:49273837-49273856 | None:intergenic | 30.0% | |
| CTTGGTTTAATGTCTATCAT+TGG | - | chr5.3:49273753-49273772 | MS.gene063041:intron | 30.0% | |
| GAAAACAGTCTTTATGTTCA+TGG | - | chr5.3:49275739-49275758 | MS.gene063041:CDS | 30.0% | |
| GTACTATGCAACTATGAAAT+GGG | + | chr5.3:49272850-49272869 | None:intergenic | 30.0% | |
| TAATGGTGAATAGATTGTGT+AGG | + | chr5.3:49274545-49274564 | None:intergenic | 30.0% | |
| TACTATGCAACTATGAAATG+GGG | + | chr5.3:49272849-49272868 | None:intergenic | 30.0% | |
| TATTTAATCACTGGAATGCA+GGG | - | chr5.3:49276031-49276050 | MS.gene063041:intron | 30.0% | |
| TGATTTAGTCGATTAGATCT+TGG | + | chr5.3:49273879-49273898 | None:intergenic | 30.0% | |
| TGTACTATGCAACTATGAAA+TGG | + | chr5.3:49272851-49272870 | None:intergenic | 30.0% | |
| TGTTTACTAAATGGTTGCAT+GGG | + | chr5.3:49275622-49275641 | None:intergenic | 30.0% | |
| TTATTTAATCACTGGAATGC+AGG | - | chr5.3:49276030-49276049 | MS.gene063041:intron | 30.0% | |
| TTCACCATTAGAATAAGACT+AGG | - | chr5.3:49274555-49274574 | MS.gene063041:CDS | 30.0% | |
| TTCATCAACGACATAAAACA+AGG | + | chr5.3:49272366-49272385 | None:intergenic | 30.0% | |
| TTCTCTTATAAATAAGACCG+GGG | + | chr5.3:49272145-49272164 | None:intergenic | 30.0% | |
| TTGAAAAAGTTATCTGGGAA+TGG | + | chr5.3:49275964-49275983 | None:intergenic | 30.0% | |
| TTGAACCAACTACATAGATT+TGG | - | chr5.3:49275677-49275696 | MS.gene063041:CDS | 30.0% | |
| TTTCATAGTTGCATAGTACA+AGG | - | chr5.3:49272851-49272870 | MS.gene063041:CDS | 30.0% | |
| TTTCCATTTCTACCTTTCTT+TGG | + | chr5.3:49276432-49276451 | None:intergenic | 30.0% | |
| ! | AAATCTATGTAGTTGGTTCA+AGG | + | chr5.3:49275678-49275697 | None:intergenic | 30.0% |
| ! | AAGACTGTTTTCTTTGAATC+TGG | + | chr5.3:49275731-49275750 | None:intergenic | 30.0% |
| ! | AATGGAAAGGATTTTGTAAG+TGG | + | chr5.3:49271023-49271042 | None:intergenic | 30.0% |
| ! | AGTTACTAACCTTACTGATT+CGG | + | chr5.3:49271307-49271326 | None:intergenic | 30.0% |
| ! | ATGGAAAGGATTTTGTAAGT+GGG | + | chr5.3:49271022-49271041 | None:intergenic | 30.0% |
| ! | CTGAATTATTAGAACGGATT+TGG | + | chr5.3:49272792-49272811 | None:intergenic | 30.0% |
| ! | GAAGACTATTTTCTATACGA+CGG | - | chr5.3:49275803-49275822 | MS.gene063041:CDS | 30.0% |
| ! | GTTGTGTAATCAAACTTTTC+AGG | - | chr5.3:49274429-49274448 | MS.gene063041:intron | 30.0% |
| ! | TACAAACTTGTTTCAGAGTT+AGG | - | chr5.3:49276309-49276328 | MS.gene063041:CDS | 30.0% |
| ! | TATGATTTGGATCATTGGAA+GGG | - | chr5.3:49271880-49271899 | MS.gene063041:intron | 30.0% |
| ! | TCCATGCACTCTAATTTTTA+TGG | - | chr5.3:49274140-49274159 | MS.gene063041:intron | 30.0% |
| ! | TTATGATTTGGATCATTGGA+AGG | - | chr5.3:49271879-49271898 | MS.gene063041:intron | 30.0% |
| ! | TTATGTCGTTGATGAATACT+TGG | - | chr5.3:49272370-49272389 | MS.gene063041:CDS | 30.0% |
| !! | ACTCTGAAACAAGTTTGTAA+CGG | + | chr5.3:49276308-49276327 | None:intergenic | 30.0% |
| !! | CTCATACTTATTTTTCTGAG+AGG | - | chr5.3:49273835-49273854 | MS.gene063041:intron | 30.0% |
| !! | TCTTTAGAGCATACTTGATT+TGG | + | chr5.3:49274627-49274646 | None:intergenic | 30.0% |
| !! | TTCTAAGAAGCCGATTATTT+TGG | - | chr5.3:49275055-49275074 | MS.gene063041:intron | 30.0% |
| !!! | AAAGTTTTTAGGTTGTACTC+AGG | + | chr5.3:49273780-49273799 | None:intergenic | 30.0% |
| !!! | ACTTTTAAGTTGCATTGACA+TGG | + | chr5.3:49275876-49275895 | None:intergenic | 30.0% |
| !!! | GTTGTTTTAGGAAACTACTT+TGG | - | chr5.3:49274777-49274796 | MS.gene063041:intron | 30.0% |
| !!! | TGTTATTTTGGTTATGGGAT+TGG | - | chr5.3:49274944-49274963 | MS.gene063041:intron | 30.0% |
| AACAATGTCTTACATAGCTC+TGG | - | chr5.3:49272667-49272686 | MS.gene063041:CDS | 35.0% | |
| AAGCCAAAGAAAGGTAGAAA+TGG | - | chr5.3:49276426-49276445 | MS.gene063041:CDS | 35.0% | |
| AATTGCAAATACTGGAAGCA+TGG | - | chr5.3:49276374-49276393 | MS.gene063041:CDS | 35.0% | |
| ACATTGGGAATTGCAAATAC+TGG | - | chr5.3:49276366-49276385 | MS.gene063041:CDS | 35.0% | |
| ACTATGCAACTATGAAATGG+GGG | + | chr5.3:49272848-49272867 | None:intergenic | 35.0% | |
| AGAGTCTGAAAATTCAGCTT+CGG | - | chr5.3:49275595-49275614 | MS.gene063041:intron | 35.0% | |
| AGCATAGAAGAAAACTAACC+TGG | + | chr5.3:49275215-49275234 | None:intergenic | 35.0% | |
| ATACTCCAAAAATTCACAGC+TGG | - | chr5.3:49273704-49273723 | MS.gene063041:intron | 35.0% | |
| ATAGTTGCATAGTACAAGGA+CGG | - | chr5.3:49272855-49272874 | MS.gene063041:CDS | 35.0% | |
| ATATATTTAGGGACCCAAGA+TGG | - | chr5.3:49271704-49271723 | MS.gene063041:intron | 35.0% | |
| ATCCAGAACGATAATGTGTT+TGG | + | chr5.3:49274854-49274873 | None:intergenic | 35.0% | |
| ATTGGATCAAAGTCAAGAGA+GGG | - | chr5.3:49274962-49274981 | MS.gene063041:intron | 35.0% | |
| ATTTAATCACTGGAATGCAG+GGG | - | chr5.3:49276032-49276051 | MS.gene063041:intron | 35.0% | |
| CACAACTAAATCTCAGTTAC+TGG | - | chr5.3:49275640-49275659 | MS.gene063041:CDS | 35.0% | |
| CCAAAACTGCTAGACAAAAA+TGG | - | chr5.3:49272948-49272967 | MS.gene063041:CDS | 35.0% | |
| CTAAGTTTCACCAACTAAGT+AGG | + | chr5.3:49273257-49273276 | None:intergenic | 35.0% | |
| CTCACTATAAGACACAAATG+AGG | + | chr5.3:49274085-49274104 | None:intergenic | 35.0% | |
| CTCATTTGTGTCTTATAGTG+AGG | - | chr5.3:49274083-49274102 | MS.gene063041:CDS | 35.0% | |
| CTTCCTTTGATCCTAAACTT+TGG | - | chr5.3:49271279-49271298 | MS.gene063041:CDS | 35.0% | |
| CTTCGAGTATACTCTTCTAA+TGG | - | chr5.3:49271534-49271553 | MS.gene063041:intron | 35.0% | |
| GCATAGAAGAAAACTAACCT+GGG | + | chr5.3:49275214-49275233 | None:intergenic | 35.0% | |
| GGTAAAGGGATAAGATTGAA+TGG | - | chr5.3:49271209-49271228 | MS.gene063041:CDS | 35.0% | |
| GTAAATACCCTTGGAGTTAT+AGG | - | chr5.3:49274729-49274748 | MS.gene063041:intron | 35.0% | |
| GTATACTCTTCTAATGGTCT+CGG | - | chr5.3:49271540-49271559 | MS.gene063041:intron | 35.0% | |
| GTATAGAATGAGTGGTTGAT+TGG | + | chr5.3:49276266-49276285 | None:intergenic | 35.0% | |
| GTGTTTACTAAATGGTTGCA+TGG | + | chr5.3:49275623-49275642 | None:intergenic | 35.0% | |
| TAAATCTCAGTTACTGGATG+CGG | - | chr5.3:49275646-49275665 | MS.gene063041:CDS | 35.0% | |
| TATACCGAGTTATCAATGGT+GGG | - | chr5.3:49271157-49271176 | MS.gene063041:CDS | 35.0% | |
| TATACTCTTCTAATGGTCTC+GGG | - | chr5.3:49271541-49271560 | MS.gene063041:intron | 35.0% | |
| TATATTTAGGGACCCAAGAT+GGG | - | chr5.3:49271705-49271724 | MS.gene063041:intron | 35.0% | |
| TCCTTGGATGATTAATTCTG+CGG | - | chr5.3:49271960-49271979 | MS.gene063041:intron | 35.0% | |
| TCTCTATGGTATATAGTCCT+TGG | - | chr5.3:49271944-49271963 | MS.gene063041:intron | 35.0% | |
| TCTCTTATAAATAAGACCGG+GGG | + | chr5.3:49272144-49272163 | None:intergenic | 35.0% | |
| TGAAGAAGGTGGTTATTTGT+TGG | - | chr5.3:49276578-49276597 | MS.gene063041:CDS | 35.0% | |
| TTACTTGACAAAGCATGCAA+AGG | - | chr5.3:49274473-49274492 | MS.gene063041:intron | 35.0% | |
| TTCAGCCAAATCTATGTAGT+TGG | + | chr5.3:49275685-49275704 | None:intergenic | 35.0% | |
| TTGATCAACGGCATAAAACA+AGG | + | chr5.3:49272634-49272653 | None:intergenic | 35.0% | |
| TTGGTACTAATCTACAAGGA+CGG | + | chr5.3:49274803-49274822 | None:intergenic | 35.0% | |
| TTTGAAGGTGGGAAACTAAT+TGG | - | chr5.3:49271814-49271833 | MS.gene063041:intron | 35.0% | |
| TTTGACAGAAATGAAGCTGT+AGG | + | chr5.3:49276223-49276242 | None:intergenic | 35.0% | |
| ! | AAAGGATTTTGTAAGTGGGT+TGG | + | chr5.3:49271018-49271037 | None:intergenic | 35.0% |
| ! | AATTAGTTTCCCACCTTCAA+AGG | + | chr5.3:49271815-49271834 | None:intergenic | 35.0% |
| ! | AATTTGGAACTCCATTGACA+CGG | + | chr5.3:49272907-49272926 | None:intergenic | 35.0% |
| ! | ATAAGACTAGGCTTGTTTGA+TGG | - | chr5.3:49274567-49274586 | MS.gene063041:CDS | 35.0% |
| ! | CATTAGAAGAGTATACTCGA+AGG | + | chr5.3:49271536-49271555 | None:intergenic | 35.0% |
| ! | CTGCTTATGATTTGGATCAT+TGG | - | chr5.3:49271875-49271894 | MS.gene063041:intron | 35.0% |
| ! | GTACCAAAGTTTAGGATCAA+AGG | + | chr5.3:49271285-49271304 | None:intergenic | 35.0% |
| ! | TAAGACTAGGCTTGTTTGAT+GGG | - | chr5.3:49274568-49274587 | MS.gene063041:CDS | 35.0% |
| ! | TAAGTCCAGCTGTGAATTTT+TGG | + | chr5.3:49273712-49273731 | None:intergenic | 35.0% |
| ! | TCAGGTTACTTTGCAAGATT+TGG | - | chr5.3:49272808-49272827 | MS.gene063041:CDS | 35.0% |
| ! | TTTTAGCAACTTCAACTGCT+CGG | + | chr5.3:49274914-49274933 | None:intergenic | 35.0% |
| !! | AAGTTCCAAGCATTGATCAA+CGG | + | chr5.3:49272646-49272665 | None:intergenic | 35.0% |
| !! | ATGTCGATTTCTGTCACATT+GGG | - | chr5.3:49276351-49276370 | MS.gene063041:CDS | 35.0% |
| !! | ATTTTGGTAATTTTGTGCGG+TGG | - | chr5.3:49275071-49275090 | MS.gene063041:intron | 35.0% |
| !! | CAAGCCTAGTCTTATTCTAA+TGG | + | chr5.3:49274562-49274581 | None:intergenic | 35.0% |
| !! | CCATTTTTGTCTAGCAGTTT+TGG | + | chr5.3:49272951-49272970 | None:intergenic | 35.0% |
| !! | CTATTTAATTTGCTTGGCGT+GGG | + | chr5.3:49273683-49273702 | None:intergenic | 35.0% |
| !! | GTAATCAAACTTTTCAGGGA+TGG | - | chr5.3:49274434-49274453 | MS.gene063041:intron | 35.0% |
| !! | TATGCTGTTTCCTATGTAAG+AGG | - | chr5.3:49271775-49271794 | MS.gene063041:intron | 35.0% |
| !! | TATTTAATTTGCTTGGCGTG+GGG | + | chr5.3:49273682-49273701 | None:intergenic | 35.0% |
| !! | TGAGAAAAGTACCTTCCATT+GGG | + | chr5.3:49273631-49273650 | None:intergenic | 35.0% |
| !!! | GTTTTCGAGTATAGAATGAG+TGG | + | chr5.3:49276274-49276293 | None:intergenic | 35.0% |
| AAAGTCTACGAATTCGGCTA+TGG | - | chr5.3:49276177-49276196 | MS.gene063041:intron | 40.0% | |
| AACTGCATGCAATGTAGTTG+TGG | - | chr5.3:49275433-49275452 | MS.gene063041:intron | 40.0% | |
| AATCCAGTGAAACAGTTGGT+AGG | - | chr5.3:49276450-49276469 | MS.gene063041:CDS | 40.0% | |
| ACCGCAGAATTAATCATCCA+AGG | + | chr5.3:49271964-49271983 | None:intergenic | 40.0% | |
| AGAGATGAAAGCAATGGTGA+TGG | + | chr5.3:49270910-49270929 | None:intergenic | 40.0% | |
| AGCCAAACACATTATCGTTC+TGG | - | chr5.3:49274849-49274868 | MS.gene063041:intron | 40.0% | |
| AGGTTATGCAAAAACACCAG+AGG | - | chr5.3:49273464-49273483 | MS.gene063041:intron | 40.0% | |
| ATATCAATGGTCCCAATGGA+AGG | - | chr5.3:49273617-49273636 | MS.gene063041:intron | 40.0% | |
| ATATTTAGGGACCCAAGATG+GGG | - | chr5.3:49271706-49271725 | MS.gene063041:intron | 40.0% | |
| ATTAGGGCCTATAACTCCAA+GGG | + | chr5.3:49274739-49274758 | None:intergenic | 40.0% | |
| ATTTGGCTGAACTGACTAGA+TGG | - | chr5.3:49275694-49275713 | MS.gene063041:CDS | 40.0% | |
| CAATGTGACAGAAATCGACA+TGG | + | chr5.3:49276352-49276371 | None:intergenic | 40.0% | |
| CTCATTCTCATGTCTGTCAT+TGG | + | chr5.3:49276102-49276121 | None:intergenic | 40.0% | |
| CTCTATATCAATGGTCCCAA+TGG | - | chr5.3:49273613-49273632 | MS.gene063041:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr5.3:49272240-49272259 | MS.gene063041:intron | 40.0% | |
| CTGCTCAATCTTTGATCAGA+TGG | - | chr5.3:49275397-49275416 | MS.gene063041:intron | 40.0% | |
| CTGTTTGTGAAGCCAAAGAA+AGG | - | chr5.3:49276417-49276436 | MS.gene063041:CDS | 40.0% | |
| CTTAGTAGAGCAAATGAGAG+TGG | - | chr5.3:49276543-49276562 | MS.gene063041:CDS | 40.0% | |
| CTTCAAGGAGATTCCTTTGA+AGG | - | chr5.3:49271799-49271818 | MS.gene063041:intron | 40.0% | |
| CTTCCAAGAGTAAATACCCT+TGG | - | chr5.3:49274720-49274739 | MS.gene063041:intron | 40.0% | |
| GAGCAAAAGACATTGTGTCA+CGG | - | chr5.3:49271072-49271091 | MS.gene063041:CDS | 40.0% | |
| GATTGGATCAAAGTCAAGAG+AGG | - | chr5.3:49274961-49274980 | MS.gene063041:intron | 40.0% | |
| GCAGCAGTAAGAATAACTTG+AGG | + | chr5.3:49271260-49271279 | None:intergenic | 40.0% | |
| GGGAGTGAGCACAAATAAAA+TGG | + | chr5.3:49272124-49272143 | None:intergenic | 40.0% | |
| GGTCCAAAAGTCTACGAATT+CGG | - | chr5.3:49276171-49276190 | MS.gene063041:intron | 40.0% | |
| GTAAGGTTGAGATTGCAGAA+TGG | + | chr5.3:49271041-49271060 | None:intergenic | 40.0% | |
| GTATACCGAGTTATCAATGG+TGG | - | chr5.3:49271156-49271175 | MS.gene063041:CDS | 40.0% | |
| GTCAGGTAACATCTGAAGAT+TGG | - | chr5.3:49275310-49275329 | MS.gene063041:intron | 40.0% | |
| GTCGATTAGATCTTGGTATG+AGG | + | chr5.3:49273872-49273891 | None:intergenic | 40.0% | |
| GTGCCATATTGTAGTTTGGT+TGG | + | chr5.3:49274597-49274616 | None:intergenic | 40.0% | |
| GTTGAGATTGCAGAATGGAA+AGG | + | chr5.3:49271036-49271055 | None:intergenic | 40.0% | |
| TATGTAGGTGATTGGAACTG+AGG | - | chr5.3:49271621-49271640 | MS.gene063041:intron | 40.0% | |
| TCCTATGTAAGAGGACTTCA+AGG | - | chr5.3:49271784-49271803 | MS.gene063041:intron | 40.0% | |
| TCCTTGAAGTCCTCTTACAT+AGG | + | chr5.3:49271788-49271807 | None:intergenic | 40.0% | |
| TCGGTATACCGAGTTATCAA+TGG | - | chr5.3:49271153-49271172 | MS.gene063041:CDS | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr5.3:49272239-49272258 | MS.gene063041:intron | 40.0% | |
| TGAATAGATTGTGTAGGGCA+CGG | + | chr5.3:49274539-49274558 | None:intergenic | 40.0% | |
| TGGAAATCCAGTGAAACAGT+TGG | - | chr5.3:49276446-49276465 | MS.gene063041:CDS | 40.0% | |
| TGTGTGTCAAAGACTGTACT+TGG | - | chr5.3:49273735-49273754 | MS.gene063041:intron | 40.0% | |
| TTATGCCGTTGATCAATGCT+TGG | - | chr5.3:49272638-49272657 | MS.gene063041:CDS | 40.0% | |
| TTGCTCTTTGAGTGATGGTA+AGG | + | chr5.3:49271058-49271077 | None:intergenic | 40.0% | |
| TTTAATCACTGGAATGCAGG+GGG | - | chr5.3:49276033-49276052 | MS.gene063041:intron | 40.0% | |
| TTTAGTTATGCCTTTGCCAG+TGG | - | chr5.3:49274059-49274078 | MS.gene063041:CDS | 40.0% | |
| TTTGGATCATTGGAAGGGTT+TGG | - | chr5.3:49271885-49271904 | MS.gene063041:intron | 40.0% | |
| ! | AAGGAGATTCCTTTGAAGGT+GGG | - | chr5.3:49271803-49271822 | MS.gene063041:intron | 40.0% |
| ! | AATCGGCTTCTTAGAAGCTT+TGG | + | chr5.3:49275051-49275070 | None:intergenic | 40.0% |
| ! | ACTTTGGTACCGAATCAGTA+AGG | - | chr5.3:49271295-49271314 | MS.gene063041:CDS | 40.0% |
| ! | AGATTGAATGGTAGTGTTGC+AGG | - | chr5.3:49271221-49271240 | MS.gene063041:CDS | 40.0% |
| ! | AGGGTATTTACTCTTGGAAG+CGG | + | chr5.3:49274720-49274739 | None:intergenic | 40.0% |
| ! | AGGTGGTTATTTGTTGGTTG+TGG | - | chr5.3:49276584-49276603 | MS.gene063041:CDS | 40.0% |
| ! | ATAAGTTCTTGCTGCTTACC+AGG | + | chr5.3:49275017-49275036 | None:intergenic | 40.0% |
| ! | ATCCAGTGAAACAGTTGGTA+GGG | - | chr5.3:49276451-49276470 | MS.gene063041:CDS | 40.0% |
| ! | CTTTTGGACCTGTGTAGAAA+CGG | + | chr5.3:49276161-49276180 | None:intergenic | 40.0% |
| ! | GGTGGTTATTTGTTGGTTGT+GGG | - | chr5.3:49276585-49276604 | MS.gene063041:CDS | 40.0% |
| ! | GGTTACTTTGCAAGATTTGG+CGG | - | chr5.3:49272811-49272830 | MS.gene063041:CDS | 40.0% |
| ! | GTCTTTTGCTCTTTGAGTGA+TGG | + | chr5.3:49271063-49271082 | None:intergenic | 40.0% |
| ! | GTGTTGCTAATGCTGGTAAA+GGG | - | chr5.3:49271195-49271214 | MS.gene063041:CDS | 40.0% |
| ! | TAGCCGAATTCGTAGACTTT+TGG | + | chr5.3:49276177-49276196 | None:intergenic | 40.0% |
| ! | TATCGTTCTGGATGTCTTGA+TGG | - | chr5.3:49274861-49274880 | MS.gene063041:intron | 40.0% |
| ! | TCATCCCACCATTGATAACT+CGG | + | chr5.3:49271164-49271183 | None:intergenic | 40.0% |
| ! | TCTATTGAAGGTGTGAGCAA+TGG | - | chr5.3:49273231-49273250 | MS.gene063041:intron | 40.0% |
| ! | TGGTTGATTGGTTGATGTGA+AGG | + | chr5.3:49276254-49276273 | None:intergenic | 40.0% |
| ! | TTATTTGTTGGTTGTGGGAG+AGG | - | chr5.3:49276590-49276609 | MS.gene063041:CDS | 40.0% |
| ! | TTTGGATCATGAGGTGGTTT+TGG | - | chr5.3:49272691-49272710 | MS.gene063041:CDS | 40.0% |
| !! | ACTCCAAGGGTATTTACTCT+TGG | + | chr5.3:49274726-49274745 | None:intergenic | 40.0% |
| !! | AGGTACATGAGTTGGTGAAT+CGG | + | chr5.3:49270976-49270995 | None:intergenic | 40.0% |
| !! | ATTATTTGGGCTGGTTATCC+TGG | - | chr5.3:49275140-49275159 | MS.gene063041:intron | 40.0% |
| !! | CATGTCGATTTCTGTCACAT+TGG | - | chr5.3:49276350-49276369 | MS.gene063041:CDS | 40.0% |
| !! | CTGATTCGGTACCAAAGTTT+AGG | + | chr5.3:49271293-49271312 | None:intergenic | 40.0% |
| !! | GCTATTTAATTTGCTTGGCG+TGG | + | chr5.3:49273684-49273703 | None:intergenic | 40.0% |
| !! | GTGAGAAAAGTACCTTCCAT+TGG | + | chr5.3:49273632-49273651 | None:intergenic | 40.0% |
| !! | TCTTTTGGGTACCATGTCAT+TGG | + | chr5.3:49276066-49276085 | None:intergenic | 40.0% |
| !!! | GAGGTGGTTTTGGATACATT+TGG | - | chr5.3:49272701-49272720 | MS.gene063041:CDS | 40.0% |
| !!! | GTCTTACATAGCTCTGGTTT+TGG | - | chr5.3:49272673-49272692 | MS.gene063041:CDS | 40.0% |
| AACCCTACCAACTGTTTCAC+TGG | + | chr5.3:49276456-49276475 | None:intergenic | 45.0% | |
| AACTGACTAGATGGTAGCAG+AGG | - | chr5.3:49275703-49275722 | MS.gene063041:CDS | 45.0% | |
| ACAATGCTGGACAAGCTCAA+GGG | - | chr5.3:49271656-49271675 | MS.gene063041:intron | 45.0% | |
| ACTGACTAGATGGTAGCAGA+GGG | - | chr5.3:49275704-49275723 | MS.gene063041:CDS | 45.0% | |
| AGAACCTACCGTTTCTACAC+AGG | - | chr5.3:49276150-49276169 | MS.gene063041:intron | 45.0% | |
| ATAGTACAAGGACGGTCTAG+TGG | - | chr5.3:49272863-49272882 | MS.gene063041:CDS | 45.0% | |
| ATGAGAGCTGATCCATCATC+AGG | - | chr5.3:49276117-49276136 | MS.gene063041:intron | 45.0% | |
| ATTGGAGGGATTATTTGGGC+TGG | - | chr5.3:49275131-49275150 | MS.gene063041:intron | 45.0% | |
| CATTAGGGCCTATAACTCCA+AGG | + | chr5.3:49274740-49274759 | None:intergenic | 45.0% | |
| GCTTTGTCTAATACTCCCTC+CGG | + | chr5.3:49272258-49272277 | None:intergenic | 45.0% | |
| GGGTATTTACTCTTGGAAGC+GGG | + | chr5.3:49274719-49274738 | None:intergenic | 45.0% | |
| GTAGAAACGGTAGGTTCTAC+CGG | + | chr5.3:49276148-49276167 | None:intergenic | 45.0% | |
| GTAGCTGATGTACTTCAAGC+TGG | - | chr5.3:49273492-49273511 | MS.gene063041:intron | 45.0% | |
| TAAGACACAAATGAGGCCAC+TGG | + | chr5.3:49274078-49274097 | None:intergenic | 45.0% | |
| TACAATGCTGGACAAGCTCA+AGG | - | chr5.3:49271655-49271674 | MS.gene063041:intron | 45.0% | |
| TAGAAACGGTAGGTTCTACC+GGG | + | chr5.3:49276147-49276166 | None:intergenic | 45.0% | |
| TGAGCAATGGCCTACTTAGT+TGG | - | chr5.3:49273244-49273263 | MS.gene063041:intron | 45.0% | |
| TGTGCTTACAACCGTGTCAA+TGG | - | chr5.3:49272893-49272912 | MS.gene063041:CDS | 45.0% | |
| TTAATCACTGGAATGCAGGG+GGG | - | chr5.3:49276034-49276053 | MS.gene063041:intron | 45.0% | |
| TTGGCGTGGGGAATATATGT+GGG | + | chr5.3:49273670-49273689 | None:intergenic | 45.0% | |
| TTTATTTGTGCTCACTCCCC+CGG | - | chr5.3:49272125-49272144 | MS.gene063041:intron | 45.0% | |
| ! | AAATGAGAGTGGTGTCAAGG+TGG | - | chr5.3:49276554-49276573 | MS.gene063041:CDS | 45.0% |
| ! | AAGCTCAAGGGATGACGTTT+TGG | - | chr5.3:49271668-49271687 | MS.gene063041:intron | 45.0% |
| ! | AGCAAATGAGAGTGGTGTCA+AGG | - | chr5.3:49276551-49276570 | MS.gene063041:CDS | 45.0% |
| ! | AGCTCAAGGGATGACGTTTT+GGG | - | chr5.3:49271669-49271688 | MS.gene063041:intron | 45.0% |
| ! | AGGGATGATTTAGAGTTGCC+TGG | - | chr5.3:49274996-49275015 | MS.gene063041:intron | 45.0% |
| ! | CAAATACTGGAAGCATGGCT+GGG | - | chr5.3:49276379-49276398 | MS.gene063041:CDS | 45.0% |
| ! | CAAGGAGATTCCTTTGAAGG+TGG | - | chr5.3:49271802-49271821 | MS.gene063041:intron | 45.0% |
| ! | GAGTATGGAGGTACATGAGT+TGG | + | chr5.3:49270984-49271003 | None:intergenic | 45.0% |
| ! | GCAAGAGGAGTATACAATGC+TGG | - | chr5.3:49271643-49271662 | MS.gene063041:intron | 45.0% |
| ! | GTGTTTGGTGACTATAACCC+AGG | - | chr5.3:49275194-49275213 | MS.gene063041:intron | 45.0% |
| !! | GCACGGTCGATTTGAGATAT+CGG | + | chr5.3:49274522-49274541 | None:intergenic | 45.0% |
| !! | GGTGTTGCTAATGCTGGTAA+AGG | - | chr5.3:49271194-49271213 | MS.gene063041:CDS | 45.0% |
| !!! | AGCTCTGGTTTTGGATCATG+AGG | - | chr5.3:49272682-49272701 | MS.gene063041:CDS | 45.0% |
| !!! | GGATTTTGTAAGTGGGTTGG+TGG | + | chr5.3:49271015-49271034 | None:intergenic | 45.0% |
| !!! | TCTGGTTTTGGATCATGAGG+TGG | - | chr5.3:49272685-49272704 | MS.gene063041:CDS | 45.0% |
| AAGAGAGGGAATCACGCGAT+AGG | - | chr5.3:49274976-49274995 | MS.gene063041:intron | 50.0% | |
| ACAAATGAGGCCACTGGCAA+AGG | + | chr5.3:49274072-49274091 | None:intergenic | 50.0% | |
| ACATCAGCTACAGCATCCTC+TGG | + | chr5.3:49273483-49273502 | None:intergenic | 50.0% | |
| AGAGAGGGAATCACGCGATA+GGG | - | chr5.3:49274977-49274996 | MS.gene063041:intron | 50.0% | |
| CAGCTTCAAGAGCAACGTCT+AGG | + | chr5.3:49274653-49274672 | None:intergenic | 50.0% | |
| CATTGTGTCACGGCTCACAT+TGG | - | chr5.3:49271082-49271101 | MS.gene063041:CDS | 50.0% | |
| CTTGGCGTGGGGAATATATG+TGG | + | chr5.3:49273671-49273690 | None:intergenic | 50.0% | |
| CTTGTCCTCTTCCCCATCTT+GGG | + | chr5.3:49271720-49271739 | None:intergenic | 50.0% | |
| GACAGCTGGAGAAGATCCTT+TGG | - | chr5.3:49271741-49271760 | MS.gene063041:intron | 50.0% | |
| GATCCATCATCAGGCTATCC+CGG | - | chr5.3:49276126-49276145 | MS.gene063041:intron | 50.0% | |
| GCTCTTGAAGCTGCAAGAAG+TGG | - | chr5.3:49274660-49274679 | MS.gene063041:CDS | 50.0% | |
| GGCTTCACAAACAGCAACAC+AGG | + | chr5.3:49276411-49276430 | None:intergenic | 50.0% | |
| GGTGTCAAGGTGGTTGAAGA+AGG | - | chr5.3:49276564-49276583 | MS.gene063041:CDS | 50.0% | |
| GTCAAGGTGGTTGAAGAAGG+TGG | - | chr5.3:49276567-49276586 | MS.gene063041:CDS | 50.0% | |
| GTGAATCGGCATGAACGAGT+TGG | + | chr5.3:49270962-49270981 | None:intergenic | 50.0% | |
| GTGATTGGAACTGAGGCAAG+AGG | - | chr5.3:49271628-49271647 | MS.gene063041:intron | 50.0% | |
| TAACTCGGTATACCGAGTCG+AGG | + | chr5.3:49271149-49271168 | None:intergenic | 50.0% | |
| TCAGGGATGGATGTAGAGTG+TGG | - | chr5.3:49274447-49274466 | MS.gene063041:intron | 50.0% | |
| TCTTGGAAGCGGGAGAATTG+AGG | + | chr5.3:49274709-49274728 | None:intergenic | 50.0% | |
| TCTTGTCCTCTTCCCCATCT+TGG | + | chr5.3:49271721-49271740 | None:intergenic | 50.0% | |
| TGGACCTGTGTAGAAACGGT+AGG | + | chr5.3:49276157-49276176 | None:intergenic | 50.0% | |
| TGGCGTGGGGAATATATGTG+GGG | + | chr5.3:49273669-49273688 | None:intergenic | 50.0% | |
| ! | AATCGGCATGAACGAGTTGG+TGG | + | chr5.3:49270959-49270978 | None:intergenic | 50.0% |
| ! | GCAAATACTGGAAGCATGGC+TGG | - | chr5.3:49276378-49276397 | MS.gene063041:CDS | 50.0% |
| ! | GGTAGGGTTTGAGAGTGTGA+CGG | - | chr5.3:49276467-49276486 | MS.gene063041:CDS | 50.0% |
| ! | TTTGAGAGTGTGACGGTGGA+AGG | - | chr5.3:49276474-49276493 | MS.gene063041:CDS | 50.0% |
| !! | TTGCACGGTGTTGCTAATGC+TGG | - | chr5.3:49271188-49271207 | MS.gene063041:CDS | 50.0% |
| !! | TTGGTGGTGTCACAGGAGTA+TGG | + | chr5.3:49270999-49271018 | None:intergenic | 50.0% |
| ACGGTGGAAGGAGGTGGAAA+GGG | - | chr5.3:49276486-49276505 | MS.gene063041:CDS | 55.0% | |
| ATACCGAGTCGAGGAATGGC+AGG | + | chr5.3:49271140-49271159 | None:intergenic | 55.0% | |
| CGGTATACCGAGTCGAGGAA+TGG | + | chr5.3:49271144-49271163 | None:intergenic | 55.0% | |
| CTACCGGGATAGCCTGATGA+TGG | + | chr5.3:49276132-49276151 | None:intergenic | 55.0% | |
| GCTGGTTATCCTGGCGAACT+TGG | - | chr5.3:49275149-49275168 | MS.gene063041:intron | 55.0% | |
| GGAAGAGGACAAGAGACAGC+TGG | - | chr5.3:49271727-49271746 | MS.gene063041:intron | 55.0% | |
| GGAGGTGGAAAGGGTGAAGT+TGG | - | chr5.3:49276495-49276514 | MS.gene063041:CDS | 55.0% | |
| GGGGGAGACTACCAATGACA+TGG | - | chr5.3:49276052-49276071 | MS.gene063041:intron | 55.0% | |
| GGTTATCCTGGCGAACTTGG+TGG | - | chr5.3:49275152-49275171 | MS.gene063041:intron | 55.0% | |
| ! | AGGGTTTGAGAGTGTGACGG+TGG | - | chr5.3:49276470-49276489 | MS.gene063041:CDS | 55.0% |
| ! | ATCCTGGCGAACTTGGTGGA+AGG | - | chr5.3:49275156-49275175 | MS.gene063041:intron | 55.0% |
| ! | CAGTGTTACTGCACGCAGTC+AGG | - | chr5.3:49275293-49275312 | MS.gene063041:intron | 55.0% |
| ! | TCCTGGCGAACTTGGTGGAA+GGG | - | chr5.3:49275157-49275176 | MS.gene063041:intron | 55.0% |
| !! | AAGTGGGTTGGTGGTGTCAC+AGG | + | chr5.3:49271006-49271025 | None:intergenic | 55.0% |
| !! | CGAGTTGGTGGTAGCGAGTT+AGG | + | chr5.3:49270947-49270966 | None:intergenic | 55.0% |
| !! | GTGGTGTCACAGGAGTATGG+AGG | + | chr5.3:49270996-49271015 | None:intergenic | 55.0% |
| !! | TGGTGGGATGAAGCGTTGCA+CGG | - | chr5.3:49271173-49271192 | MS.gene063041:CDS | 55.0% |
| AGGGACCCAAGATGGGGAAG+AGG | - | chr5.3:49271712-49271731 | MS.gene063041:intron | 60.0% | |
| AGTGTGACGGTGGAAGGAGG+TGG | - | chr5.3:49276480-49276499 | MS.gene063041:CDS | 60.0% | |
| GACGGTGGAAGGAGGTGGAA+AGG | - | chr5.3:49276485-49276504 | MS.gene063041:CDS | 60.0% | |
| GCTCCTGCCATTCCTCGACT+CGG | - | chr5.3:49271134-49271153 | MS.gene063041:CDS | 60.0% | |
| TGGTGGAAGGGCTCTTGCTC+AGG | - | chr5.3:49275169-49275188 | MS.gene063041:intron | 60.0% | |
| ! | GAGAGTGTGACGGTGGAAGG+AGG | - | chr5.3:49276477-49276496 | MS.gene063041:CDS | 60.0% |
| GCCCTTCCACCAAGTTCGCC+AGG | + | chr5.3:49275161-49275180 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 49270894 | 49276641 | 49270894 | ID=MS.gene063041 |
| chr5.3 | mRNA | 49270894 | 49276641 | 49270894 | ID=MS.gene063041.t1;Parent=MS.gene063041 |
| chr5.3 | exon | 49276219 | 49276641 | 49276219 | ID=MS.gene063041.t1.exon1;Parent=MS.gene063041.t1 |
| chr5.3 | CDS | 49276219 | 49276641 | 49276219 | ID=cds.MS.gene063041.t1;Parent=MS.gene063041.t1 |
| chr5.3 | exon | 49275605 | 49275907 | 49275605 | ID=MS.gene063041.t1.exon2;Parent=MS.gene063041.t1 |
| chr5.3 | CDS | 49275605 | 49275907 | 49275605 | ID=cds.MS.gene063041.t1;Parent=MS.gene063041.t1 |
| chr5.3 | exon | 49274554 | 49274723 | 49274554 | ID=MS.gene063041.t1.exon3;Parent=MS.gene063041.t1 |
| chr5.3 | CDS | 49274554 | 49274723 | 49274554 | ID=cds.MS.gene063041.t1;Parent=MS.gene063041.t1 |
| chr5.3 | exon | 49274022 | 49274119 | 49274022 | ID=MS.gene063041.t1.exon4;Parent=MS.gene063041.t1 |
| chr5.3 | CDS | 49274022 | 49274119 | 49274022 | ID=cds.MS.gene063041.t1;Parent=MS.gene063041.t1 |
| chr5.3 | exon | 49272320 | 49273084 | 49272320 | ID=MS.gene063041.t1.exon5;Parent=MS.gene063041.t1 |
| chr5.3 | CDS | 49272320 | 49273084 | 49272320 | ID=cds.MS.gene063041.t1;Parent=MS.gene063041.t1 |
| chr5.3 | exon | 49270894 | 49271483 | 49270894 | ID=MS.gene063041.t1.exon6;Parent=MS.gene063041.t1 |
| chr5.3 | CDS | 49270894 | 49271483 | 49270894 | ID=cds.MS.gene063041.t1;Parent=MS.gene063041.t1 |
| Gene Sequence |
| Protein sequence |
