Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063755.t1 | XP_003609906.1 | 97.4 | 194 | 5 | 0 | 8 | 201 | 14 | 207 | 2.70E-102 | 381.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063755.t1 | P93045 | 77.8 | 194 | 43 | 0 | 8 | 201 | 14 | 207 | 8.0e-87 | 321.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063755.t1 | G7JR36 | 97.4 | 194 | 5 | 0 | 8 | 201 | 14 | 207 | 2.0e-102 | 381.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063755 | MS.gene95803 | PPI |
| MS.gene063755 | MS.gene77163 | PPI |
| MS.gene071364 | MS.gene063755 | PPI |
| MS.gene063755 | MS.gene018762 | PPI |
| MS.gene070946 | MS.gene063755 | PPI |
| MS.gene020313 | MS.gene063755 | PPI |
| MS.gene043818 | MS.gene063755 | PPI |
| MS.gene024860 | MS.gene063755 | PPI |
| MS.gene063755 | MS.gene28495 | PPI |
| MS.gene063755 | MS.gene34372 | PPI |
| MS.gene21834 | MS.gene063755 | PPI |
| MS.gene04820 | MS.gene063755 | PPI |
| MS.gene063755 | MS.gene49473 | PPI |
| MS.gene77160 | MS.gene063755 | PPI |
| MS.gene063755 | MS.gene011927 | PPI |
| MS.gene063755 | MS.gene46303 | PPI |
| MS.gene063755 | MS.gene76352 | PPI |
| MS.gene81099 | MS.gene063755 | PPI |
| MS.gene071366 | MS.gene063755 | PPI |
| MS.gene063755 | MS.gene043821 | PPI |
| MS.gene063755 | MS.gene001031 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063755.t1 | MTR_4g124260 | 97.423 | 194 | 5 | 0 | 8 | 201 | 14 | 207 | 6.99e-139 | 387 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063755.t1 | AT3G17590 | 77.835 | 194 | 43 | 0 | 8 | 201 | 16 | 209 | 1.92e-116 | 331 |
| MS.gene063755.t1 | AT3G17590 | 77.835 | 194 | 43 | 0 | 8 | 201 | 14 | 207 | 3.06e-115 | 328 |
| MS.gene063755.t1 | AT3G17590 | 71.649 | 194 | 42 | 1 | 8 | 201 | 14 | 194 | 1.39e-101 | 293 |
Find 45 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGACTTGGTCAAGCTATT+TGG | 0.270286 | 8.2:-9923996 | MS.gene063755:CDS |
| AAGGTTCTTGCAAACTCTTC+AGG | 0.281000 | 8.2:+9924608 | None:intergenic |
| GCCTTCACTTGGAACCCTTC+TGG | 0.293675 | 8.2:-9926182 | MS.gene063755:intron |
| AACACTACAATCTCAGAATC+AGG | 0.412173 | 8.2:+9926057 | None:intergenic |
| AGAAGAGAAATGTACTTGAA+TGG | 0.412442 | 8.2:+9925972 | None:intergenic |
| GAGAGAGAGGCAGACCTTGA+TGG | 0.438619 | 8.2:+9925788 | None:intergenic |
| GGGCTGACTTCTTTCCAGTC+AGG | 0.438902 | 8.2:-9924159 | MS.gene063755:intron |
| ATACATATCTTGACCGTCAT+AGG | 0.457986 | 8.2:+9925830 | None:intergenic |
| GTATTAAATCTAGTGTTGTT+CGG | 0.462848 | 8.2:-9923974 | None:intergenic |
| AGGCGCTGTAGCAGTGGACT+TGG | 0.473348 | 8.2:-9924009 | MS.gene063755:CDS |
| ATTTCAATGTCGAGTCGAAT+GGG | 0.476706 | 8.2:+9926227 | None:intergenic |
| TGAGCAATTTGAGTAACAAA+AGG | 0.480272 | 8.2:+9925997 | None:intergenic |
| GATTTCAATGTCGAGTCGAA+TGG | 0.493002 | 8.2:+9926226 | None:intergenic |
| GACGGTCAAGATATGTATGC+TGG | 0.501652 | 8.2:-9925825 | MS.gene063755:CDS |
| TGTAAATCATACGCTTGTAA+AGG | 0.524144 | 8.2:-9924778 | MS.gene063755:CDS |
| GGCATTGAGGATCCTGAGGT+TGG | 0.528970 | 8.2:-9924572 | MS.gene063755:CDS |
| AGAGAGAGGCAGACCTTGAT+GGG | 0.529112 | 8.2:+9925789 | None:intergenic |
| GAAAGCAGATTAAGCAAGAA+GGG | 0.529838 | 8.2:-9924190 | MS.gene063755:CDS |
| CTGCAGAGACATGGGCATTG+AGG | 0.530287 | 8.2:-9924585 | MS.gene063755:CDS |
| AGAAAGCAGATTAAGCAAGA+AGG | 0.537341 | 8.2:-9924191 | MS.gene063755:CDS |
| AAGAACCTTCTGCAGAGACA+TGG | 0.540639 | 8.2:-9924594 | MS.gene063755:CDS |
| CTGATGGCAAAGGCAATAGC+TGG | 0.540724 | 8.2:+9924394 | None:intergenic |
| CTCGTAAAGCTGTTCTCTGA+TGG | 0.544456 | 8.2:+9924378 | None:intergenic |
| GCAATTTGAGTAACAAAAGG+TGG | 0.545843 | 8.2:+9926000 | None:intergenic |
| TAAAGGAGGCGCTGTAGCAG+TGG | 0.556137 | 8.2:-9924015 | MS.gene063755:CDS |
| ACCAGAAGGGTTCCAAGTGA+AGG | 0.556476 | 8.2:+9926181 | None:intergenic |
| GATACAAGGATGCCTTCACT+TGG | 0.562726 | 8.2:-9926193 | MS.gene063755:CDS |
| AGAGAAGATTGTTCCCATCA+AGG | 0.563391 | 8.2:-9925802 | MS.gene063755:intron |
| GCTGAATTTCGATCCTATGA+CGG | 0.564430 | 8.2:-9925843 | MS.gene063755:CDS |
| AATGCCCATGTCTCTGCAGA+AGG | 0.565956 | 8.2:+9924589 | None:intergenic |
| GATATACTTACTCCAACCTC+AGG | 0.574479 | 8.2:+9924560 | None:intergenic |
| TCAGATTGTAGTTCAGAGTG+TGG | 0.590053 | 8.2:-9924224 | MS.gene063755:intron |
| AGAACCTTCTGCAGAGACAT+GGG | 0.593998 | 8.2:-9924593 | MS.gene063755:CDS |
| CAAAACACACAGGCCAACCT+CGG | 0.612239 | 8.2:-9926261 | MS.gene063755:CDS |
| TAAGCAAGAAGGGTCGTCGA+GGG | 0.614091 | 8.2:-9924180 | MS.gene063755:CDS |
| ATTTGAGTAACAAAAGGTGG+AGG | 0.622715 | 8.2:+9926003 | None:intergenic |
| AATCGACGGTCATAGATACA+AGG | 0.627696 | 8.2:-9926207 | MS.gene063755:CDS |
| CATGGGCATTGAGGATCCTG+AGG | 0.640210 | 8.2:-9924576 | MS.gene063755:CDS |
| CATCAGAGAACAGCTTTACG+AGG | 0.641355 | 8.2:-9924377 | MS.gene063755:intron |
| TCATCTGTTGACAGTAAAGG+AGG | 0.644374 | 8.2:-9924029 | MS.gene063755:intron |
| TTAAGCAAGAAGGGTCGTCG+AGG | 0.656519 | 8.2:-9924181 | MS.gene063755:CDS |
| AAGCAAGAAGGGTCGTCGAG+GGG | 0.658726 | 8.2:-9924179 | MS.gene063755:CDS |
| AAGCTGTTCTCTGATGGCAA+AGG | 0.669799 | 8.2:+9924384 | None:intergenic |
| CGACTCGACATTGAAATCGA+CGG | 0.674810 | 8.2:-9926221 | MS.gene063755:CDS |
| TAACGATAAACAAAACACAC+AGG | 0.675072 | 8.2:-9926271 | MS.gene063755:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr8.2:9925946-9925965 | MS.gene063755:intron | 0.0% |
| !! | ACACATTTATATAAAAAAAA+TGG | + | chr8.2:9925115-9925134 | None:intergenic | 10.0% |
| !! | ATTAAAAAACTATATAAGAA+TGG | + | chr8.2:9924133-9924152 | None:intergenic | 10.0% |
| !! | ATTAATTTATTATTAGCAAT+AGG | + | chr8.2:9925724-9925743 | None:intergenic | 10.0% |
| !! | TATAAAAAAAAAAAAACCTA+TGG | + | chr8.2:9924664-9924683 | None:intergenic | 10.0% |
| !! | TATTATTAATTAATTTCACT+TGG | - | chr8.2:9924105-9924124 | MS.gene063755:intron | 10.0% |
| !!! | TAATTTTGAATACATTTATT+TGG | + | chr8.2:9925187-9925206 | None:intergenic | 10.0% |
| !! | AATAATAAAAAAATACCAGA+AGG | + | chr8.2:9924092-9924111 | None:intergenic | 15.0% |
| !! | ATAATAAAAAAATACCAGAA+GGG | + | chr8.2:9924091-9924110 | None:intergenic | 15.0% |
| !! | AATTTATTATTAGCAATAGG+TGG | + | chr8.2:9925721-9925740 | None:intergenic | 20.0% |
| !! | AATTTCAAAGTCCATAATAA+TGG | + | chr8.2:9925778-9925797 | None:intergenic | 20.0% |
| !! | ATTGATCATTGAAAAGAAAA+GGG | + | chr8.2:9924998-9925017 | None:intergenic | 20.0% |
| !! | ATTTCAAAGTCCATAATAAT+GGG | + | chr8.2:9925777-9925796 | None:intergenic | 20.0% |
| !! | GTATGTTTCAAATTTCAAAA+AGG | + | chr8.2:9925814-9925833 | None:intergenic | 20.0% |
| !! | TATGTTATAAGCTACTATAT+TGG | - | chr8.2:9924598-9924617 | MS.gene063755:CDS | 20.0% |
| !!! | AGAGTGTAAATTAGTTTTAA+AGG | + | chr8.2:9924954-9924973 | None:intergenic | 20.0% |
| !!! | AGTGTATTTTTTACAATTAG+AGG | - | chr8.2:9925339-9925358 | MS.gene063755:intron | 20.0% |
| !!! | ATAATTTTCAATGTCATTGA+TGG | + | chr8.2:9925222-9925241 | None:intergenic | 20.0% |
| !!! | GAAAATTATACACATGTTTT+TGG | - | chr8.2:9925233-9925252 | MS.gene063755:intron | 20.0% |
| !!! | GAGTGTAAATTAGTTTTAAA+GGG | + | chr8.2:9924953-9924972 | None:intergenic | 20.0% |
| ! | AAAAACAAGTCAATCCAAAT+GGG | + | chr8.2:9924737-9924756 | None:intergenic | 25.0% |
| ! | ATGAAAATGAATTAAGACGA+TGG | + | chr8.2:9926010-9926029 | None:intergenic | 25.0% |
| ! | ATTGGTCATTGAAAAGAAAA+GGG | + | chr8.2:9925039-9925058 | None:intergenic | 25.0% |
| ! | CATTGATCATTGAAAAGAAA+AGG | + | chr8.2:9924999-9925018 | None:intergenic | 25.0% |
| ! | TCAAATTAGTCAATCCAAAA+AGG | - | chr8.2:9924910-9924929 | MS.gene063755:intron | 25.0% |
| ! | TGTAATAGTACCCATTATTA+TGG | - | chr8.2:9925764-9925783 | MS.gene063755:intron | 25.0% |
| ! | TGTATTCAAAATTACGTACT+TGG | - | chr8.2:9925193-9925212 | MS.gene063755:intron | 25.0% |
| ! | TTTATCATATCAACTGAACT+AGG | + | chr8.2:9926141-9926160 | None:intergenic | 25.0% |
| !! | TGTAAAGGACCAATTTTTAT+GGG | - | chr8.2:9925493-9925512 | MS.gene063755:intron | 25.0% |
| !! | TTGTAAAGGACCAATTTTTA+TGG | - | chr8.2:9925492-9925511 | MS.gene063755:intron | 25.0% |
| !!! | AACAGTTTTGTAAGTGTTTA+TGG | - | chr8.2:9924694-9924713 | MS.gene063755:intron | 25.0% |
| !!! | ATACACATGTTTTTGGAAAT+TGG | - | chr8.2:9925240-9925259 | MS.gene063755:intron | 25.0% |
| !!! | ATTGGAAGACTTGTTTTAAA+AGG | - | chr8.2:9925258-9925277 | MS.gene063755:intron | 25.0% |
| !!! | ATTTTTTACAATTAGAGGAG+AGG | - | chr8.2:9925344-9925363 | MS.gene063755:intron | 25.0% |
| !!! | TTTTTGAGCTTATGAAAAGT+AGG | - | chr8.2:9924752-9924771 | MS.gene063755:intron | 25.0% |
| AAAGGGATGATAAGAATCTA+TGG | + | chr8.2:9924936-9924955 | None:intergenic | 30.0% | |
| AAGGTTCGTTTACATCATAA+TGG | - | chr8.2:9925277-9925296 | MS.gene063755:intron | 30.0% | |
| ACAATTTATGAACATGCCAT+AGG | - | chr8.2:9924645-9924664 | MS.gene063755:intron | 30.0% | |
| AGAAGAGAAATGTACTTGAA+TGG | + | chr8.2:9924287-9924306 | None:intergenic | 30.0% | |
| CAAAAACAAGTCAATCCAAA+TGG | + | chr8.2:9924738-9924757 | None:intergenic | 30.0% | |
| CATAATTCATAAGGTTGTCA+AGG | + | chr8.2:9924863-9924882 | None:intergenic | 30.0% | |
| CATTGGTCATTGAAAAGAAA+AGG | + | chr8.2:9925040-9925059 | None:intergenic | 30.0% | |
| CCAATCATATAATACAATGC+CGG | + | chr8.2:9925532-9925551 | None:intergenic | 30.0% | |
| CTACTATATTGGAGAACTTA+TGG | - | chr8.2:9924609-9924628 | MS.gene063755:CDS | 30.0% | |
| GATGATCAATTCATGTTTGT+TGG | - | chr8.2:9924364-9924383 | MS.gene063755:intron | 30.0% | |
| GCAATCTTACCCATAAAAAT+TGG | + | chr8.2:9925505-9925524 | None:intergenic | 30.0% | |
| TAACGATAAACAAAACACAC+AGG | - | chr8.2:9923985-9924004 | MS.gene063755:CDS | 30.0% | |
| TGAGCAATTTGAGTAACAAA+AGG | + | chr8.2:9924262-9924281 | None:intergenic | 30.0% | |
| TGGGTACTATTACAAATTCA+AGG | + | chr8.2:9925758-9925777 | None:intergenic | 30.0% | |
| TGTAAATCATACGCTTGTAA+AGG | - | chr8.2:9925478-9925497 | MS.gene063755:intron | 30.0% | |
| ! | AACAACGAGATTTTGTCAAT+AGG | + | chr8.2:9925435-9925454 | None:intergenic | 30.0% |
| ! | ATAAGAATCTATGGCCTTTT+TGG | + | chr8.2:9924927-9924946 | None:intergenic | 30.0% |
| ! | ATATAAGGTGTTTATGGAAC+AGG | + | chr8.2:9924528-9924547 | None:intergenic | 30.0% |
| ! | GCTTTTACGCATAATTCATA+AGG | + | chr8.2:9924872-9924891 | None:intergenic | 30.0% |
| ! | GTCTACATTTGTTAAATTCC+AGG | - | chr8.2:9925602-9925621 | MS.gene063755:intron | 30.0% |
| AACACTACAATCTCAGAATC+AGG | + | chr8.2:9924202-9924221 | None:intergenic | 35.0% | |
| AAGTGTATGAAAAACCTGAC+TGG | + | chr8.2:9926114-9926133 | None:intergenic | 35.0% | |
| ACACTTACAAAACTGTTCAG+AGG | + | chr8.2:9924691-9924710 | None:intergenic | 35.0% | |
| AGAAAGCAGATTAAGCAAGA+AGG | - | chr8.2:9926065-9926084 | MS.gene063755:intron | 35.0% | |
| AGCACATTTCATTTCTCTAC+GGG | - | chr8.2:9925310-9925329 | MS.gene063755:intron | 35.0% | |
| ATACATATCTTGACCGTCAT+AGG | + | chr8.2:9924429-9924448 | None:intergenic | 35.0% | |
| ATCATTGAAAAGAAAAGGGC+AGG | + | chr8.2:9924994-9925013 | None:intergenic | 35.0% | |
| ATGTTCCTTGGATTGAACTA+GGG | - | chr8.2:9924498-9924517 | MS.gene063755:intron | 35.0% | |
| ATTTCAATGTCGAGTCGAAT+GGG | + | chr8.2:9924032-9924051 | None:intergenic | 35.0% | |
| ATTTGAGTAACAAAAGGTGG+AGG | + | chr8.2:9924256-9924275 | None:intergenic | 35.0% | |
| CAAATGTAGACACATACATG+AGG | + | chr8.2:9925593-9925612 | None:intergenic | 35.0% | |
| CAGCACATTTCATTTCTCTA+CGG | - | chr8.2:9925309-9925328 | MS.gene063755:intron | 35.0% | |
| CCGGCATTGTATTATATGAT+TGG | - | chr8.2:9925529-9925548 | MS.gene063755:intron | 35.0% | |
| CTATCATCTGTTGACAGTAA+AGG | - | chr8.2:9926224-9926243 | MS.gene063755:CDS | 35.0% | |
| GAAAGCAGATTAAGCAAGAA+GGG | - | chr8.2:9926066-9926085 | MS.gene063755:intron | 35.0% | |
| GAACATAAAAAGAGAGAGAG+AGG | + | chr8.2:9924484-9924503 | None:intergenic | 35.0% | |
| GCAATTTGAGTAACAAAAGG+TGG | + | chr8.2:9924259-9924278 | None:intergenic | 35.0% | |
| GTCGCTTGTAATCATATCAT+TGG | + | chr8.2:9925057-9925076 | None:intergenic | 35.0% | |
| TACGAGGTCATTCATTCTAT+TGG | - | chr8.2:9925895-9925914 | MS.gene063755:intron | 35.0% | |
| TATCAAAGTTGTTCAAGTCC+TGG | + | chr8.2:9925623-9925642 | None:intergenic | 35.0% | |
| TATCCATGAGCGCTTATATA+AGG | + | chr8.2:9924543-9924562 | None:intergenic | 35.0% | |
| TATGTTCCTTGGATTGAACT+AGG | - | chr8.2:9924497-9924516 | MS.gene063755:intron | 35.0% | |
| ! | CTCTCTCTTTTTATGTTCCT+TGG | - | chr8.2:9924486-9924505 | MS.gene063755:intron | 35.0% |
| ! | GCGCTTATATAAGGTGTTTA+TGG | + | chr8.2:9924534-9924553 | None:intergenic | 35.0% |
| ! | GTTTTGTAAGTGTTTATGGC+TGG | - | chr8.2:9924698-9924717 | MS.gene063755:intron | 35.0% |
| ! | TAAGGTTGTCAAGGTACTTA+TGG | + | chr8.2:9924854-9924873 | None:intergenic | 35.0% |
| !!! | TGATTTGCTGCACTTTTTGT+TGG | - | chr8.2:9925565-9925584 | MS.gene063755:intron | 35.0% |
| AAGGTTCTTGCAAACTCTTC+AGG | + | chr8.2:9925651-9925670 | None:intergenic | 40.0% | |
| AATCGACGGTCATAGATACA+AGG | - | chr8.2:9924049-9924068 | MS.gene063755:intron | 40.0% | |
| ACACCTTATATAAGCGCTCA+TGG | - | chr8.2:9924537-9924556 | MS.gene063755:intron | 40.0% | |
| AGAGAAGATTGTTCCCATCA+AGG | - | chr8.2:9924454-9924473 | MS.gene063755:intron | 40.0% | |
| GATATACTTACTCCAACCTC+AGG | + | chr8.2:9925699-9925718 | None:intergenic | 40.0% | |
| GATTTCAATGTCGAGTCGAA+TGG | + | chr8.2:9924033-9924052 | None:intergenic | 40.0% | |
| GCACATTTCATTTCTCTACG+GGG | - | chr8.2:9925311-9925330 | MS.gene063755:intron | 40.0% | |
| GCTGAATTTCGATCCTATGA+CGG | - | chr8.2:9924413-9924432 | MS.gene063755:intron | 40.0% | |
| GCTGCAAAACAGTAGCATTT+AGG | + | chr8.2:9925843-9925862 | None:intergenic | 40.0% | |
| GTCGTTTAAGCATCTCTCAA+GGG | - | chr8.2:9925370-9925389 | MS.gene063755:intron | 40.0% | |
| TCAGATTGTAGTTCAGAGTG+TGG | - | chr8.2:9926032-9926051 | MS.gene063755:CDS | 40.0% | |
| TCATCTGTTGACAGTAAAGG+AGG | - | chr8.2:9926227-9926246 | MS.gene063755:CDS | 40.0% | |
| ! | TAAGGTGTTTATGGAACAGG+AGG | + | chr8.2:9924525-9924544 | None:intergenic | 40.0% |
| ! | TCCAAATGGGCCTTATATAC+TGG | + | chr8.2:9924724-9924743 | None:intergenic | 40.0% |
| ! | TGTCGTTTAAGCATCTCTCA+AGG | - | chr8.2:9925369-9925388 | MS.gene063755:intron | 40.0% |
| ! | TTATGGCTGGCCAGTATATA+AGG | - | chr8.2:9924711-9924730 | MS.gene063755:intron | 40.0% |
| AAAAGGGCAGGCTTCTTTGA+TGG | + | chr8.2:9924982-9925001 | None:intergenic | 45.0% | |
| AAAGGGCAGGCTTCTTTGAT+GGG | + | chr8.2:9924981-9925000 | None:intergenic | 45.0% | |
| AAGAACCTTCTGCAGAGACA+TGG | - | chr8.2:9925662-9925681 | MS.gene063755:intron | 45.0% | |
| AAGCTGTTCTCTGATGGCAA+AGG | + | chr8.2:9925875-9925894 | None:intergenic | 45.0% | |
| AGAACCTTCTGCAGAGACAT+GGG | - | chr8.2:9925663-9925682 | MS.gene063755:intron | 45.0% | |
| CATCAGAGAACAGCTTTACG+AGG | - | chr8.2:9925879-9925898 | MS.gene063755:intron | 45.0% | |
| CGACTCGACATTGAAATCGA+CGG | - | chr8.2:9924035-9924054 | MS.gene063755:intron | 45.0% | |
| CTCGTAAAGCTGTTCTCTGA+TGG | + | chr8.2:9925881-9925900 | None:intergenic | 45.0% | |
| GACGGTCAAGATATGTATGC+TGG | - | chr8.2:9924431-9924450 | MS.gene063755:intron | 45.0% | |
| GATACAAGGATGCCTTCACT+TGG | - | chr8.2:9924063-9924082 | MS.gene063755:intron | 45.0% | |
| GCCAGTATATAAGGCCCATT+TGG | - | chr8.2:9924720-9924739 | MS.gene063755:intron | 45.0% | |
| TATGGGTAAGATTGCAGCAC+CGG | - | chr8.2:9925510-9925529 | MS.gene063755:intron | 45.0% | |
| ! | AATGGGTACGAGATTTTCCG+AGG | + | chr8.2:9924015-9924034 | None:intergenic | 45.0% |
| ! | GTGGACTTGGTCAAGCTATT+TGG | - | chr8.2:9926260-9926279 | MS.gene063755:CDS | 45.0% |
| AAGGGCAGGCTTCTTTGATG+GGG | + | chr8.2:9924980-9924999 | None:intergenic | 50.0% | |
| AATGCCCATGTCTCTGCAGA+AGG | + | chr8.2:9925670-9925689 | None:intergenic | 50.0% | |
| ACCAGAAGGGTTCCAAGTGA+AGG | + | chr8.2:9924078-9924097 | None:intergenic | 50.0% | |
| AGAGAGAGGCAGACCTTGAT+GGG | + | chr8.2:9924470-9924489 | None:intergenic | 50.0% | |
| CAAAACACACAGGCCAACCT+CGG | - | chr8.2:9923995-9924014 | MS.gene063755:CDS | 50.0% | |
| CTGATGGCAAAGGCAATAGC+TGG | + | chr8.2:9925865-9925884 | None:intergenic | 50.0% | |
| GAGGACCCTAGTTCAATCCA+AGG | + | chr8.2:9924506-9924525 | None:intergenic | 50.0% | |
| TAAGCAAGAAGGGTCGTCGA+GGG | - | chr8.2:9926076-9926095 | MS.gene063755:intron | 50.0% | |
| TTAAGCAAGAAGGGTCGTCG+AGG | - | chr8.2:9926075-9926094 | MS.gene063755:intron | 50.0% | |
| ! | GGTACGAGATTTTCCGAGGT+TGG | + | chr8.2:9924011-9924030 | None:intergenic | 50.0% |
| AAGCAAGAAGGGTCGTCGAG+GGG | - | chr8.2:9926077-9926096 | MS.gene063755:intron | 55.0% | |
| AGGGCAGGCTTCTTTGATGG+GGG | + | chr8.2:9924979-9924998 | None:intergenic | 55.0% | |
| GAGAGAGAGGCAGACCTTGA+TGG | + | chr8.2:9924471-9924490 | None:intergenic | 55.0% | |
| GCCTTCACTTGGAACCCTTC+TGG | - | chr8.2:9924074-9924093 | MS.gene063755:intron | 55.0% | |
| ! | CTGCAGAGACATGGGCATTG+AGG | - | chr8.2:9925671-9925690 | MS.gene063755:intron | 55.0% |
| ! | GGCATTGAGGATCCTGAGGT+TGG | - | chr8.2:9925684-9925703 | MS.gene063755:intron | 55.0% |
| ! | GGGCTGACTTCTTTCCAGTC+AGG | - | chr8.2:9926097-9926116 | MS.gene063755:intron | 55.0% |
| !! | CATGGGCATTGAGGATCCTG+AGG | - | chr8.2:9925680-9925699 | MS.gene063755:intron | 55.0% |
| !! | TAAAGGAGGCGCTGTAGCAG+TGG | - | chr8.2:9926241-9926260 | MS.gene063755:CDS | 55.0% |
| ! | AGGCGCTGTAGCAGTGGACT+TGG | - | chr8.2:9926247-9926266 | MS.gene063755:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 9923975 | 9926303 | 9923975 | ID=MS.gene063755 |
| chr8.2 | mRNA | 9923975 | 9926303 | 9923975 | ID=MS.gene063755.t1;Parent=MS.gene063755 |
| chr8.2 | exon | 9926183 | 9926303 | 9926183 | ID=MS.gene063755.t1.exon1;Parent=MS.gene063755.t1 |
| chr8.2 | CDS | 9926183 | 9926303 | 9926183 | ID=cds.MS.gene063755.t1;Parent=MS.gene063755.t1 |
| chr8.2 | exon | 9925987 | 9926081 | 9925987 | ID=MS.gene063755.t1.exon2;Parent=MS.gene063755.t1 |
| chr8.2 | CDS | 9925987 | 9926081 | 9925987 | ID=cds.MS.gene063755.t1;Parent=MS.gene063755.t1 |
| chr8.2 | exon | 9925803 | 9925874 | 9925803 | ID=MS.gene063755.t1.exon3;Parent=MS.gene063755.t1 |
| chr8.2 | CDS | 9925803 | 9925874 | 9925803 | ID=cds.MS.gene063755.t1;Parent=MS.gene063755.t1 |
| chr8.2 | exon | 9924764 | 9924811 | 9924764 | ID=MS.gene063755.t1.exon4;Parent=MS.gene063755.t1 |
| chr8.2 | CDS | 9924764 | 9924811 | 9924764 | ID=cds.MS.gene063755.t1;Parent=MS.gene063755.t1 |
| chr8.2 | exon | 9924571 | 9924654 | 9924571 | ID=MS.gene063755.t1.exon5;Parent=MS.gene063755.t1 |
| chr8.2 | CDS | 9924571 | 9924654 | 9924571 | ID=cds.MS.gene063755.t1;Parent=MS.gene063755.t1 |
| chr8.2 | exon | 9924378 | 9924416 | 9924378 | ID=MS.gene063755.t1.exon6;Parent=MS.gene063755.t1 |
| chr8.2 | CDS | 9924378 | 9924416 | 9924378 | ID=cds.MS.gene063755.t1;Parent=MS.gene063755.t1 |
| chr8.2 | exon | 9924160 | 9924242 | 9924160 | ID=MS.gene063755.t1.exon7;Parent=MS.gene063755.t1 |
| chr8.2 | CDS | 9924160 | 9924242 | 9924160 | ID=cds.MS.gene063755.t1;Parent=MS.gene063755.t1 |
| chr8.2 | exon | 9923975 | 9924037 | 9923975 | ID=MS.gene063755.t1.exon8;Parent=MS.gene063755.t1 |
| chr8.2 | CDS | 9923975 | 9924037 | 9923975 | ID=cds.MS.gene063755.t1;Parent=MS.gene063755.t1 |
| Gene Sequence |
| Protein sequence |