Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063757.t1 | XP_003609906.1 | 97.4 | 194 | 5 | 0 | 8 | 201 | 14 | 207 | 2.70E-102 | 381.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063757.t1 | P93045 | 77.8 | 194 | 43 | 0 | 8 | 201 | 14 | 207 | 8.0e-87 | 321.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063757.t1 | G7JR36 | 97.4 | 194 | 5 | 0 | 8 | 201 | 14 | 207 | 2.0e-102 | 381.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene001031 | MS.gene063757 | PPI |
MS.gene81099 | MS.gene063757 | PPI |
MS.gene071366 | MS.gene063757 | PPI |
MS.gene071364 | MS.gene063757 | PPI |
MS.gene063757 | MS.gene34372 | PPI |
MS.gene018762 | MS.gene063757 | PPI |
MS.gene070946 | MS.gene063757 | PPI |
MS.gene020313 | MS.gene063757 | PPI |
MS.gene49473 | MS.gene063757 | PPI |
MS.gene04820 | MS.gene063757 | PPI |
MS.gene043818 | MS.gene063757 | PPI |
MS.gene024860 | MS.gene063757 | PPI |
MS.gene28495 | MS.gene063757 | PPI |
MS.gene77163 | MS.gene063757 | PPI |
MS.gene95803 | MS.gene063757 | PPI |
MS.gene063757 | MS.gene011927 | PPI |
MS.gene21834 | MS.gene063757 | PPI |
MS.gene77160 | MS.gene063757 | PPI |
MS.gene063757 | MS.gene46303 | PPI |
MS.gene063757 | MS.gene76352 | PPI |
MS.gene063757 | MS.gene043821 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063757.t1 | MTR_4g124260 | 97.423 | 194 | 5 | 0 | 8 | 201 | 14 | 207 | 6.99e-139 | 387 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063757.t1 | AT3G17590 | 77.835 | 194 | 43 | 0 | 8 | 201 | 16 | 209 | 1.92e-116 | 331 |
MS.gene063757.t1 | AT3G17590 | 77.835 | 194 | 43 | 0 | 8 | 201 | 14 | 207 | 3.06e-115 | 328 |
MS.gene063757.t1 | AT3G17590 | 71.649 | 194 | 42 | 1 | 8 | 201 | 14 | 194 | 1.39e-101 | 293 |
Find 45 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGACTTGGTCAAGCTATT+TGG | 0.270286 | 8.2:+9889631 | MS.gene063757:CDS |
AAGGTTCTTGCAAACTCTTC+AGG | 0.281000 | 8.2:-9889021 | None:intergenic |
GCCTTCACTTGGAACCCTTC+TGG | 0.293675 | 8.2:+9887448 | MS.gene063757:CDS |
AACACTACAATCTCAGAATC+AGG | 0.412173 | 8.2:-9887573 | None:intergenic |
AGAAGAGAAATGTACTTGAA+TGG | 0.412442 | 8.2:-9887658 | None:intergenic |
GAGAGAGAGGCAGACCTTGA+TGG | 0.438619 | 8.2:-9887842 | None:intergenic |
GGGCTGACTTCTTTCCAGTC+AGG | 0.438902 | 8.2:+9889468 | MS.gene063757:CDS |
ATACATATCTTGACCGTCAT+AGG | 0.457986 | 8.2:-9887800 | None:intergenic |
GTATTAAATCTAGTGTTGTT+CGG | 0.462848 | 8.2:+9889653 | MS.gene063757:CDS |
AGGCGCTGTAGCAGTGGACT+TGG | 0.473348 | 8.2:+9889618 | MS.gene063757:CDS |
ATTTCAATGTCGAGTCGAAT+GGG | 0.476706 | 8.2:-9887403 | None:intergenic |
TGAGCAATTTGAGTAACAAA+AGG | 0.480272 | 8.2:-9887633 | None:intergenic |
GATTTCAATGTCGAGTCGAA+TGG | 0.493002 | 8.2:-9887404 | None:intergenic |
GACGGTCAAGATATGTATGC+TGG | 0.501652 | 8.2:+9887805 | MS.gene063757:CDS |
TGTAAATCATACGCTTGTAA+AGG | 0.524144 | 8.2:+9888851 | MS.gene063757:CDS |
GGCATTGAGGATCCTGAGGT+TGG | 0.528970 | 8.2:+9889057 | MS.gene063757:CDS |
AGAGAGAGGCAGACCTTGAT+GGG | 0.529112 | 8.2:-9887841 | None:intergenic |
GAAAGCAGATTAAGCAAGAA+GGG | 0.529838 | 8.2:+9889437 | MS.gene063757:CDS |
CTGCAGAGACATGGGCATTG+AGG | 0.530287 | 8.2:+9889044 | MS.gene063757:CDS |
AGAAAGCAGATTAAGCAAGA+AGG | 0.537341 | 8.2:+9889436 | MS.gene063757:CDS |
AAGAACCTTCTGCAGAGACA+TGG | 0.540639 | 8.2:+9889035 | MS.gene063757:CDS |
CTGATGGCAAAGGCAATAGC+TGG | 0.540724 | 8.2:-9889235 | None:intergenic |
CTCGTAAAGCTGTTCTCTGA+TGG | 0.544456 | 8.2:-9889251 | None:intergenic |
GCAATTTGAGTAACAAAAGG+TGG | 0.545843 | 8.2:-9887630 | None:intergenic |
TAAAGGAGGCGCTGTAGCAG+TGG | 0.556137 | 8.2:+9889612 | MS.gene063757:CDS |
ACCAGAAGGGTTCCAAGTGA+AGG | 0.556476 | 8.2:-9887449 | None:intergenic |
GATACAAGGATGCCTTCACT+TGG | 0.562726 | 8.2:+9887437 | MS.gene063757:CDS |
AGAGAAGATTGTTCCCATCA+AGG | 0.563391 | 8.2:+9887828 | MS.gene063757:CDS |
GCTGAATTTCGATCCTATGA+CGG | 0.564430 | 8.2:+9887787 | MS.gene063757:CDS |
AATGCCCATGTCTCTGCAGA+AGG | 0.565956 | 8.2:-9889040 | None:intergenic |
GATATACTTACTCCAACCTC+AGG | 0.574479 | 8.2:-9889069 | None:intergenic |
TCAGATTGTAGTTCAGAGTG+TGG | 0.590053 | 8.2:+9889403 | MS.gene063757:intron |
AGAACCTTCTGCAGAGACAT+GGG | 0.593998 | 8.2:+9889036 | MS.gene063757:CDS |
CAAAACACACAGGCCAACCT+CGG | 0.612239 | 8.2:+9887369 | MS.gene063757:CDS |
TAAGCAAGAAGGGTCGTCGA+GGG | 0.614091 | 8.2:+9889447 | MS.gene063757:CDS |
ATTTGAGTAACAAAAGGTGG+AGG | 0.622715 | 8.2:-9887627 | None:intergenic |
AATCGACGGTCATAGATACA+AGG | 0.627696 | 8.2:+9887423 | MS.gene063757:CDS |
CATGGGCATTGAGGATCCTG+AGG | 0.640210 | 8.2:+9889053 | MS.gene063757:CDS |
CATCAGAGAACAGCTTTACG+AGG | 0.641355 | 8.2:+9889252 | MS.gene063757:CDS |
TCATCTGTTGACAGTAAAGG+AGG | 0.644374 | 8.2:+9889598 | MS.gene063757:intron |
TTAAGCAAGAAGGGTCGTCG+AGG | 0.656519 | 8.2:+9889446 | MS.gene063757:CDS |
AAGCAAGAAGGGTCGTCGAG+GGG | 0.658726 | 8.2:+9889448 | MS.gene063757:CDS |
AAGCTGTTCTCTGATGGCAA+AGG | 0.669799 | 8.2:-9889245 | None:intergenic |
CGACTCGACATTGAAATCGA+CGG | 0.674810 | 8.2:+9887409 | MS.gene063757:CDS |
TAACGATAAACAAAACACAC+AGG | 0.675072 | 8.2:+9887359 | MS.gene063757:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+TGG | + | chr8.2:9889319-9889338 | MS.gene063757:intron | 0.0% |
!! | ACACATTTATATAAAAAAAA+TGG | - | chr8.2:9888488-9888507 | None:intergenic | 10.0% |
!! | ATTAAAAAACTATATAAGAA+TGG | - | chr8.2:9887507-9887526 | None:intergenic | 10.0% |
!! | ATTAATTTATTATTAGCAAT+AGG | - | chr8.2:9889097-9889116 | None:intergenic | 10.0% |
!! | TATTATTAATTAATTTCACT+TGG | + | chr8.2:9887479-9887498 | MS.gene063757:intron | 10.0% |
!! | TTATAAAAAAAAAAAACCTA+TGG | - | chr8.2:9888038-9888057 | None:intergenic | 10.0% |
!!! | TAATTTTGAATACATTTATT+TGG | - | chr8.2:9888560-9888579 | None:intergenic | 10.0% |
!! | AATAATAAAAAAATACCAGA+AGG | - | chr8.2:9887466-9887485 | None:intergenic | 15.0% |
!! | ATAATAAAAAAATACCAGAA+GGG | - | chr8.2:9887465-9887484 | None:intergenic | 15.0% |
!! | AATTTATTATTAGCAATAGG+TGG | - | chr8.2:9889094-9889113 | None:intergenic | 20.0% |
!! | AATTTCAAAGTCCATAATAA+TGG | - | chr8.2:9889151-9889170 | None:intergenic | 20.0% |
!! | ATTGATCATTGAAAAGAAAA+GGG | - | chr8.2:9888371-9888390 | None:intergenic | 20.0% |
!! | ATTTCAAAGTCCATAATAAT+GGG | - | chr8.2:9889150-9889169 | None:intergenic | 20.0% |
!! | GTATGTTTCAAATTTCAAAA+AGG | - | chr8.2:9889187-9889206 | None:intergenic | 20.0% |
!! | TATGTTATAAGCTACTATAT+TGG | + | chr8.2:9887972-9887991 | MS.gene063757:intron | 20.0% |
!!! | AGAGTGTAAATTAGTTTTAA+AGG | - | chr8.2:9888327-9888346 | None:intergenic | 20.0% |
!!! | AGTGTATTTTTTACAATTAG+AGG | + | chr8.2:9888712-9888731 | MS.gene063757:intron | 20.0% |
!!! | ATAATTTTCAATGTCATTGA+TGG | - | chr8.2:9888595-9888614 | None:intergenic | 20.0% |
!!! | GAAAATTATACACATGTTTT+TGG | + | chr8.2:9888606-9888625 | MS.gene063757:intron | 20.0% |
!!! | GAGTGTAAATTAGTTTTAAA+GGG | - | chr8.2:9888326-9888345 | None:intergenic | 20.0% |
! | AAAAACAAGTCAATCCAAAT+GGG | - | chr8.2:9888110-9888129 | None:intergenic | 25.0% |
! | ATGAAAATGAATTAAGACGA+TGG | - | chr8.2:9889381-9889400 | None:intergenic | 25.0% |
! | ATTGGTCATTGAAAAGAAAA+GGG | - | chr8.2:9888412-9888431 | None:intergenic | 25.0% |
! | CATTGATCATTGAAAAGAAA+AGG | - | chr8.2:9888372-9888391 | None:intergenic | 25.0% |
! | TCAAATTAGTCAATCCAAAA+AGG | + | chr8.2:9888283-9888302 | MS.gene063757:intron | 25.0% |
! | TGTAATAGTACCCATTATTA+TGG | + | chr8.2:9889137-9889156 | MS.gene063757:intron | 25.0% |
! | TGTATTCAAAATTACGTACT+TGG | + | chr8.2:9888566-9888585 | MS.gene063757:intron | 25.0% |
! | TTTATCATATCAACTGAACT+AGG | - | chr8.2:9889512-9889531 | None:intergenic | 25.0% |
!! | TGTAAAGGACCAATTTTTAT+GGG | + | chr8.2:9888866-9888885 | MS.gene063757:CDS | 25.0% |
!! | TTGTAAAGGACCAATTTTTA+TGG | + | chr8.2:9888865-9888884 | MS.gene063757:CDS | 25.0% |
!!! | AACAGTTTTGTAAGTGTTTA+TGG | + | chr8.2:9888067-9888086 | MS.gene063757:intron | 25.0% |
!!! | ATACACATGTTTTTGGAAAT+TGG | + | chr8.2:9888613-9888632 | MS.gene063757:intron | 25.0% |
!!! | ATTGGAAGACTTGTTTTAAA+AGG | + | chr8.2:9888631-9888650 | MS.gene063757:intron | 25.0% |
!!! | ATTTTTTACAATTAGAGGAG+AGG | + | chr8.2:9888717-9888736 | MS.gene063757:intron | 25.0% |
!!! | TTTTTGAGCTTATGAAAAGT+AGG | + | chr8.2:9888125-9888144 | MS.gene063757:intron | 25.0% |
AAAGGGATGATAAGAATCTA+TGG | - | chr8.2:9888309-9888328 | None:intergenic | 30.0% | |
AAGGTTCGTTTACATCATAA+TGG | + | chr8.2:9888650-9888669 | MS.gene063757:intron | 30.0% | |
ACAATTTATGAACATGCCAT+AGG | + | chr8.2:9888019-9888038 | MS.gene063757:intron | 30.0% | |
AGAAGAGAAATGTACTTGAA+TGG | - | chr8.2:9887661-9887680 | None:intergenic | 30.0% | |
CAAAAACAAGTCAATCCAAA+TGG | - | chr8.2:9888111-9888130 | None:intergenic | 30.0% | |
CATAATTCATAAGGTTGTCA+AGG | - | chr8.2:9888236-9888255 | None:intergenic | 30.0% | |
CATTGGTCATTGAAAAGAAA+AGG | - | chr8.2:9888413-9888432 | None:intergenic | 30.0% | |
CCAATCATATAATACAATGC+CGG | - | chr8.2:9888905-9888924 | None:intergenic | 30.0% | |
CTACTATATTGGAGAACTTA+TGG | + | chr8.2:9887983-9888002 | MS.gene063757:intron | 30.0% | |
GATGATCAATTCATGTTTGT+TGG | + | chr8.2:9887738-9887757 | MS.gene063757:intron | 30.0% | |
GCAATCTTACCCATAAAAAT+TGG | - | chr8.2:9888878-9888897 | None:intergenic | 30.0% | |
TAACGATAAACAAAACACAC+AGG | + | chr8.2:9887359-9887378 | MS.gene063757:CDS | 30.0% | |
TGAGCAATTTGAGTAACAAA+AGG | - | chr8.2:9887636-9887655 | None:intergenic | 30.0% | |
TGGGTACTATTACAAATTCA+AGG | - | chr8.2:9889131-9889150 | None:intergenic | 30.0% | |
TGTAAATCATACGCTTGTAA+AGG | + | chr8.2:9888851-9888870 | MS.gene063757:CDS | 30.0% | |
! | AACAACGAGATTTTGTCAAT+AGG | - | chr8.2:9888808-9888827 | None:intergenic | 30.0% |
! | ATAAGAATCTATGGCCTTTT+TGG | - | chr8.2:9888300-9888319 | None:intergenic | 30.0% |
! | ATATAAGGTGTTTATGGAAC+AGG | - | chr8.2:9887902-9887921 | None:intergenic | 30.0% |
! | GCTTTTACGCATAATTCATA+AGG | - | chr8.2:9888245-9888264 | None:intergenic | 30.0% |
! | GTCTACATTTGTTAAATTCC+AGG | + | chr8.2:9888975-9888994 | MS.gene063757:intron | 30.0% |
AACACTACAATCTCAGAATC+AGG | - | chr8.2:9887576-9887595 | None:intergenic | 35.0% | |
AAGTGTATGAAAAACCTGAC+TGG | - | chr8.2:9889485-9889504 | None:intergenic | 35.0% | |
ACACTTACAAAACTGTTCAG+AGG | - | chr8.2:9888064-9888083 | None:intergenic | 35.0% | |
AGAAAGCAGATTAAGCAAGA+AGG | + | chr8.2:9889436-9889455 | MS.gene063757:CDS | 35.0% | |
AGCACATTTCATTTCTCTAC+GGG | + | chr8.2:9888683-9888702 | MS.gene063757:intron | 35.0% | |
ATACATATCTTGACCGTCAT+AGG | - | chr8.2:9887803-9887822 | None:intergenic | 35.0% | |
ATCATTGAAAAGAAAAGGGC+AGG | - | chr8.2:9888367-9888386 | None:intergenic | 35.0% | |
ATGTTCCTTGGATTGAACTA+GGG | + | chr8.2:9887872-9887891 | MS.gene063757:intron | 35.0% | |
ATTTCAATGTCGAGTCGAAT+GGG | - | chr8.2:9887406-9887425 | None:intergenic | 35.0% | |
ATTTGAGTAACAAAAGGTGG+AGG | - | chr8.2:9887630-9887649 | None:intergenic | 35.0% | |
CAAATGTAGACACATACATG+AGG | - | chr8.2:9888966-9888985 | None:intergenic | 35.0% | |
CAGCACATTTCATTTCTCTA+CGG | + | chr8.2:9888682-9888701 | MS.gene063757:intron | 35.0% | |
CCGGCATTGTATTATATGAT+TGG | + | chr8.2:9888902-9888921 | MS.gene063757:intron | 35.0% | |
CTATCATCTGTTGACAGTAA+AGG | + | chr8.2:9889595-9889614 | MS.gene063757:intron | 35.0% | |
GAAAGCAGATTAAGCAAGAA+GGG | + | chr8.2:9889437-9889456 | MS.gene063757:CDS | 35.0% | |
GAACATAAAAAGAGAGAGAG+AGG | - | chr8.2:9887858-9887877 | None:intergenic | 35.0% | |
GCAATTTGAGTAACAAAAGG+TGG | - | chr8.2:9887633-9887652 | None:intergenic | 35.0% | |
GTCGCTTGTAATCATATCAT+TGG | - | chr8.2:9888430-9888449 | None:intergenic | 35.0% | |
TACGAGGTCATTCATTCTAT+TGG | + | chr8.2:9889268-9889287 | MS.gene063757:intron | 35.0% | |
TATCAAAGTTGTTCAAGTCC+TGG | - | chr8.2:9888996-9889015 | None:intergenic | 35.0% | |
TATCCATGAGCGCTTATATA+AGG | - | chr8.2:9887917-9887936 | None:intergenic | 35.0% | |
TATGTTCCTTGGATTGAACT+AGG | + | chr8.2:9887871-9887890 | MS.gene063757:intron | 35.0% | |
! | CTCTCTCTTTTTATGTTCCT+TGG | + | chr8.2:9887860-9887879 | MS.gene063757:intron | 35.0% |
! | GCGCTTATATAAGGTGTTTA+TGG | - | chr8.2:9887908-9887927 | None:intergenic | 35.0% |
! | GTTTTGTAAGTGTTTATGGC+TGG | + | chr8.2:9888071-9888090 | MS.gene063757:intron | 35.0% |
! | TAAGGTTGTCAAGGTACTTA+TGG | - | chr8.2:9888227-9888246 | None:intergenic | 35.0% |
!!! | TGATTTGCTGCACTTTTTGT+TGG | + | chr8.2:9888938-9888957 | MS.gene063757:intron | 35.0% |
AAGGTTCTTGCAAACTCTTC+AGG | - | chr8.2:9889024-9889043 | None:intergenic | 40.0% | |
AATCGACGGTCATAGATACA+AGG | + | chr8.2:9887423-9887442 | MS.gene063757:CDS | 40.0% | |
ACACCTTATATAAGCGCTCA+TGG | + | chr8.2:9887911-9887930 | MS.gene063757:intron | 40.0% | |
AGAGAAGATTGTTCCCATCA+AGG | + | chr8.2:9887828-9887847 | MS.gene063757:CDS | 40.0% | |
GATATACTTACTCCAACCTC+AGG | - | chr8.2:9889072-9889091 | None:intergenic | 40.0% | |
GATTTCAATGTCGAGTCGAA+TGG | - | chr8.2:9887407-9887426 | None:intergenic | 40.0% | |
GCACATTTCATTTCTCTACG+GGG | + | chr8.2:9888684-9888703 | MS.gene063757:intron | 40.0% | |
GCTGAATTTCGATCCTATGA+CGG | + | chr8.2:9887787-9887806 | MS.gene063757:CDS | 40.0% | |
GCTGCAAAACAGTAGCATTT+AGG | - | chr8.2:9889216-9889235 | None:intergenic | 40.0% | |
GTCGTTTAAGCATCTCTCAA+GGG | + | chr8.2:9888743-9888762 | MS.gene063757:intron | 40.0% | |
TCAGATTGTAGTTCAGAGTG+TGG | + | chr8.2:9889403-9889422 | MS.gene063757:intron | 40.0% | |
TCATCTGTTGACAGTAAAGG+AGG | + | chr8.2:9889598-9889617 | MS.gene063757:intron | 40.0% | |
! | TAAGGTGTTTATGGAACAGG+AGG | - | chr8.2:9887899-9887918 | None:intergenic | 40.0% |
! | TCCAAATGGGCCTTATATAC+TGG | - | chr8.2:9888097-9888116 | None:intergenic | 40.0% |
! | TGTCGTTTAAGCATCTCTCA+AGG | + | chr8.2:9888742-9888761 | MS.gene063757:intron | 40.0% |
! | TTATGGCTGGCCAGTATATA+AGG | + | chr8.2:9888084-9888103 | MS.gene063757:intron | 40.0% |
AAAAGGGCAGGCTTCTTTGA+TGG | - | chr8.2:9888355-9888374 | None:intergenic | 45.0% | |
AAAGGGCAGGCTTCTTTGAT+GGG | - | chr8.2:9888354-9888373 | None:intergenic | 45.0% | |
AAGAACCTTCTGCAGAGACA+TGG | + | chr8.2:9889035-9889054 | MS.gene063757:CDS | 45.0% | |
AAGCTGTTCTCTGATGGCAA+AGG | - | chr8.2:9889248-9889267 | None:intergenic | 45.0% | |
AGAACCTTCTGCAGAGACAT+GGG | + | chr8.2:9889036-9889055 | MS.gene063757:CDS | 45.0% | |
CATCAGAGAACAGCTTTACG+AGG | + | chr8.2:9889252-9889271 | MS.gene063757:CDS | 45.0% | |
CGACTCGACATTGAAATCGA+CGG | + | chr8.2:9887409-9887428 | MS.gene063757:CDS | 45.0% | |
CTCGTAAAGCTGTTCTCTGA+TGG | - | chr8.2:9889254-9889273 | None:intergenic | 45.0% | |
GACGGTCAAGATATGTATGC+TGG | + | chr8.2:9887805-9887824 | MS.gene063757:CDS | 45.0% | |
GATACAAGGATGCCTTCACT+TGG | + | chr8.2:9887437-9887456 | MS.gene063757:CDS | 45.0% | |
GCCAGTATATAAGGCCCATT+TGG | + | chr8.2:9888093-9888112 | MS.gene063757:intron | 45.0% | |
TATGGGTAAGATTGCAGCAC+CGG | + | chr8.2:9888883-9888902 | MS.gene063757:intron | 45.0% | |
! | AATGGGTACGAGATTTTCCG+AGG | - | chr8.2:9887389-9887408 | None:intergenic | 45.0% |
! | GTGGACTTGGTCAAGCTATT+TGG | + | chr8.2:9889631-9889650 | MS.gene063757:CDS | 45.0% |
AAGGGCAGGCTTCTTTGATG+GGG | - | chr8.2:9888353-9888372 | None:intergenic | 50.0% | |
AATGCCCATGTCTCTGCAGA+AGG | - | chr8.2:9889043-9889062 | None:intergenic | 50.0% | |
ACCAGAAGGGTTCCAAGTGA+AGG | - | chr8.2:9887452-9887471 | None:intergenic | 50.0% | |
AGAGAGAGGCAGACCTTGAT+GGG | - | chr8.2:9887844-9887863 | None:intergenic | 50.0% | |
CAAAACACACAGGCCAACCT+CGG | + | chr8.2:9887369-9887388 | MS.gene063757:CDS | 50.0% | |
CTGATGGCAAAGGCAATAGC+TGG | - | chr8.2:9889238-9889257 | None:intergenic | 50.0% | |
GAGGACCCTAGTTCAATCCA+AGG | - | chr8.2:9887880-9887899 | None:intergenic | 50.0% | |
TAAGCAAGAAGGGTCGTCGA+GGG | + | chr8.2:9889447-9889466 | MS.gene063757:CDS | 50.0% | |
TTAAGCAAGAAGGGTCGTCG+AGG | + | chr8.2:9889446-9889465 | MS.gene063757:CDS | 50.0% | |
! | GGTACGAGATTTTCCGAGGT+TGG | - | chr8.2:9887385-9887404 | None:intergenic | 50.0% |
AAGCAAGAAGGGTCGTCGAG+GGG | + | chr8.2:9889448-9889467 | MS.gene063757:CDS | 55.0% | |
AGGGCAGGCTTCTTTGATGG+GGG | - | chr8.2:9888352-9888371 | None:intergenic | 55.0% | |
GAGAGAGAGGCAGACCTTGA+TGG | - | chr8.2:9887845-9887864 | None:intergenic | 55.0% | |
GCCTTCACTTGGAACCCTTC+TGG | + | chr8.2:9887448-9887467 | MS.gene063757:CDS | 55.0% | |
! | CTGCAGAGACATGGGCATTG+AGG | + | chr8.2:9889044-9889063 | MS.gene063757:CDS | 55.0% |
! | GGCATTGAGGATCCTGAGGT+TGG | + | chr8.2:9889057-9889076 | MS.gene063757:CDS | 55.0% |
! | GGGCTGACTTCTTTCCAGTC+AGG | + | chr8.2:9889468-9889487 | MS.gene063757:CDS | 55.0% |
!! | CATGGGCATTGAGGATCCTG+AGG | + | chr8.2:9889053-9889072 | MS.gene063757:CDS | 55.0% |
!! | TAAAGGAGGCGCTGTAGCAG+TGG | + | chr8.2:9889612-9889631 | MS.gene063757:CDS | 55.0% |
! | AGGCGCTGTAGCAGTGGACT+TGG | + | chr8.2:9889618-9889637 | MS.gene063757:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 9887349 | 9889674 | 9887349 | ID=MS.gene063757 |
chr8.2 | mRNA | 9887349 | 9889674 | 9887349 | ID=MS.gene063757.t1;Parent=MS.gene063757 |
chr8.2 | exon | 9887349 | 9887469 | 9887349 | ID=MS.gene063757.t1.exon1;Parent=MS.gene063757.t1 |
chr8.2 | CDS | 9887349 | 9887469 | 9887349 | ID=cds.MS.gene063757.t1;Parent=MS.gene063757.t1 |
chr8.2 | exon | 9887571 | 9887665 | 9887571 | ID=MS.gene063757.t1.exon2;Parent=MS.gene063757.t1 |
chr8.2 | CDS | 9887571 | 9887665 | 9887571 | ID=cds.MS.gene063757.t1;Parent=MS.gene063757.t1 |
chr8.2 | exon | 9887778 | 9887849 | 9887778 | ID=MS.gene063757.t1.exon3;Parent=MS.gene063757.t1 |
chr8.2 | CDS | 9887778 | 9887849 | 9887778 | ID=cds.MS.gene063757.t1;Parent=MS.gene063757.t1 |
chr8.2 | exon | 9888840 | 9888887 | 9888840 | ID=MS.gene063757.t1.exon4;Parent=MS.gene063757.t1 |
chr8.2 | CDS | 9888840 | 9888887 | 9888840 | ID=cds.MS.gene063757.t1;Parent=MS.gene063757.t1 |
chr8.2 | exon | 9888997 | 9889080 | 9888997 | ID=MS.gene063757.t1.exon5;Parent=MS.gene063757.t1 |
chr8.2 | CDS | 9888997 | 9889080 | 9888997 | ID=cds.MS.gene063757.t1;Parent=MS.gene063757.t1 |
chr8.2 | exon | 9889235 | 9889273 | 9889235 | ID=MS.gene063757.t1.exon6;Parent=MS.gene063757.t1 |
chr8.2 | CDS | 9889235 | 9889273 | 9889235 | ID=cds.MS.gene063757.t1;Parent=MS.gene063757.t1 |
chr8.2 | exon | 9889407 | 9889489 | 9889407 | ID=MS.gene063757.t1.exon7;Parent=MS.gene063757.t1 |
chr8.2 | CDS | 9889407 | 9889489 | 9889407 | ID=cds.MS.gene063757.t1;Parent=MS.gene063757.t1 |
chr8.2 | exon | 9889612 | 9889674 | 9889612 | ID=MS.gene063757.t1.exon8;Parent=MS.gene063757.t1 |
chr8.2 | CDS | 9889612 | 9889674 | 9889612 | ID=cds.MS.gene063757.t1;Parent=MS.gene063757.t1 |
Gene Sequence |
Protein sequence |