Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06561.t1 | XP_003602452.1 | 93 | 484 | 1 | 2 | 1 | 451 | 1 | 484 | 1.90E-249 | 871.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06561.t1 | G7J9R1 | 93.0 | 484 | 1 | 2 | 1 | 451 | 1 | 484 | 1.4e-249 | 871.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene06561 | 0.871072 | 9.03E-67 | -1.69E-46 |
| MS.gene049300 | MS.gene06561 | 0.8182 | 2.22E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene06561 | 0.833092 | 6.50E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene06561 | 0.819206 | 1.31E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene06561 | 0.840866 | 6.72E-58 | -1.69E-46 |
| MS.gene049744 | MS.gene06561 | 0.811112 | 8.24E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene06561 | 0.847749 | 9.50E-60 | -1.69E-46 |
| MS.gene050258 | MS.gene06561 | 0.810682 | 1.02E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene06561 | 0.811934 | 5.46E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene06561 | 0.83257 | 8.77E-56 | -1.69E-46 |
| MS.gene052168 | MS.gene06561 | 0.831094 | 2.03E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene06561 | 0.866913 | 2.01E-65 | -1.69E-46 |
| MS.gene052463 | MS.gene06561 | 0.836069 | 1.16E-56 | -1.69E-46 |
| MS.gene052514 | MS.gene06561 | 0.800413 | 1.46E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene06561 | 0.800789 | 1.22E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene06561 | 0.875398 | 3.18E-68 | -1.69E-46 |
| MS.gene052775 | MS.gene06561 | 0.806525 | 7.89E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene06561 | 0.833283 | 5.83E-56 | -1.69E-46 |
| MS.gene053143 | MS.gene06561 | 0.823561 | 1.30E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene06561 | 0.819202 | 1.31E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene06561 | 0.823787 | 1.15E-53 | -1.69E-46 |
| MS.gene054576 | MS.gene06561 | 0.805222 | 1.48E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene06561 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene054824 | MS.gene06561 | 0.827944 | 1.18E-54 | -1.69E-46 |
| MS.gene054943 | MS.gene06561 | 0.80987 | 1.53E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene06561 | 0.842582 | 2.37E-58 | -1.69E-46 |
| MS.gene056050 | MS.gene06561 | 0.812895 | 3.37E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene06561 | 0.837832 | 4.12E-57 | -1.69E-46 |
| MS.gene056390 | MS.gene06561 | 0.804995 | 1.65E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene06561 | 0.819269 | 1.27E-52 | -1.69E-46 |
| MS.gene056519 | MS.gene06561 | 0.827682 | 1.37E-54 | -1.69E-46 |
| MS.gene056699 | MS.gene06561 | 0.838486 | 2.79E-57 | -1.69E-46 |
| MS.gene05686 | MS.gene06561 | 0.801478 | 8.84E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene06561 | 0.832949 | 7.06E-56 | -1.69E-46 |
| MS.gene057102 | MS.gene06561 | 0.825568 | 4.37E-54 | -1.69E-46 |
| MS.gene057329 | MS.gene06561 | 0.836938 | 6.98E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene06561 | 0.801133 | 1.04E-48 | -1.69E-46 |
| MS.gene058289 | MS.gene06561 | 0.809415 | 1.91E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene06561 | 0.858981 | 5.67E-63 | -1.69E-46 |
| MS.gene058668 | MS.gene06561 | 0.832662 | 8.32E-56 | -1.69E-46 |
| MS.gene058919 | MS.gene06561 | 0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene059570 | MS.gene06561 | 0.834002 | 3.85E-56 | -1.69E-46 |
| MS.gene059778 | MS.gene06561 | 0.823583 | 1.28E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene06561 | 0.840323 | 9.32E-58 | -1.69E-46 |
| MS.gene060933 | MS.gene06561 | 0.805911 | 1.06E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene06561 | 0.822015 | 2.97E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene06561 | 0.829899 | 3.98E-55 | -1.69E-46 |
| MS.gene061160 | MS.gene06561 | 0.805358 | 1.39E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene06561 | 0.802964 | 4.37E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06561.t1 | MTR_3g093520 | 92.975 | 484 | 1 | 2 | 1 | 451 | 1 | 484 | 0.0 | 912 |
| MS.gene06561.t1 | MTR_5g068570 | 83.122 | 474 | 44 | 5 | 12 | 451 | 17 | 488 | 0.0 | 795 |
| MS.gene06561.t1 | MTR_7g074450 | 81.446 | 415 | 66 | 4 | 40 | 451 | 71 | 477 | 0.0 | 693 |
| MS.gene06561.t1 | MTR_4g102610 | 58.950 | 419 | 125 | 11 | 40 | 451 | 57 | 435 | 1.86e-153 | 443 |
| MS.gene06561.t1 | MTR_4g102580 | 58.824 | 255 | 80 | 6 | 183 | 431 | 1 | 236 | 3.25e-88 | 270 |
| MS.gene06561.t1 | MTR_6g460700 | 85.000 | 40 | 5 | 1 | 2 | 40 | 38 | 77 | 2.41e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06561.t1 | AT3G54190 | 77.871 | 479 | 60 | 5 | 5 | 451 | 3 | 467 | 0.0 | 741 |
| MS.gene06561.t1 | AT2G38630 | 75.365 | 479 | 71 | 5 | 5 | 451 | 4 | 467 | 0.0 | 716 |
| MS.gene06561.t1 | AT2G38630 | 77.296 | 392 | 52 | 3 | 5 | 364 | 4 | 390 | 0.0 | 605 |
| MS.gene06561.t1 | AT2G38630 | 74.426 | 305 | 41 | 3 | 5 | 277 | 4 | 303 | 3.14e-154 | 441 |
Find 85 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGTACTTCTGCATTTC+AGG | 0.137058 | 3.2:+78508326 | None:intergenic |
| ACTATTGCTTGCTCTTATTT+TGG | 0.142620 | 3.2:+78506414 | None:intergenic |
| GGCAACTGTGCTCCTCATTT+TGG | 0.199495 | 3.2:+78506315 | None:intergenic |
| CGTTCAACCATCTTCTTTAT+CGG | 0.228283 | 3.2:-78507481 | MS.gene06561:CDS |
| GTAGAGTTTGATGATGTAAA+TGG | 0.233273 | 3.2:-78508004 | MS.gene06561:CDS |
| TTCGAAATGTCAGGAATAAT+TGG | 0.249410 | 3.2:+78507223 | None:intergenic |
| ATGAAATCTATACGGGAAAT+AGG | 0.280316 | 3.2:-78506246 | MS.gene06561:CDS |
| ACCACAGACGAAGGACCTTT+TGG | 0.282699 | 3.2:+78508662 | None:intergenic |
| AGATCGCAATGAAATCTATA+CGG | 0.334449 | 3.2:-78506254 | MS.gene06561:CDS |
| TAAAATGTTGCTGACATTGA+TGG | 0.401179 | 3.2:+78506453 | None:intergenic |
| ACTGACCGTGATTCTTCTTC+CGG | 0.401954 | 3.2:+78510527 | None:intergenic |
| TCAGTCCCGATGAAGTTATA+AGG | 0.416657 | 3.2:-78508420 | MS.gene06561:CDS |
| CGCGGTGGTCGAACGGTGGA+TGG | 0.421145 | 3.2:-78510453 | MS.gene06561:CDS |
| AAAAGAGCAAAGCCAGCATC+TGG | 0.421789 | 3.2:+78508058 | None:intergenic |
| CCTTGTACTTCTGCATTTCA+GGG | 0.428447 | 3.2:+78508327 | None:intergenic |
| TAGAGTTTGATGATGTAAAT+GGG | 0.441258 | 3.2:-78508003 | MS.gene06561:CDS |
| GGTAATATCTTCCAAGGCTT+CGG | 0.457415 | 3.2:+78506294 | None:intergenic |
| TCTTATTCCGATAAAGAAGA+TGG | 0.472412 | 3.2:+78507474 | None:intergenic |
| AGACTCCTTATAACTTCATC+GGG | 0.473998 | 3.2:+78508415 | None:intergenic |
| TACTTACATCAAGAATTTGA+AGG | 0.474134 | 3.2:+78507393 | None:intergenic |
| GAGCACAGTTGCCGAAGCCT+TGG | 0.477858 | 3.2:-78506305 | MS.gene06561:CDS |
| AGTTGCTGTGACAGTTCTTC+AGG | 0.483179 | 3.2:-78506373 | MS.gene06561:CDS |
| CAGCAACTGCACTTGTCCAT+TGG | 0.487604 | 3.2:+78506388 | None:intergenic |
| ATCAAAGATTATTGAGATTG+TGG | 0.488197 | 3.2:-78508618 | MS.gene06561:CDS |
| GGCACGGTCTAGTTCATGTC+TGG | 0.488541 | 3.2:-78506225 | MS.gene06561:CDS |
| CACCGTTCGACCACCGCGAC+CGG | 0.490444 | 3.2:+78510458 | None:intergenic |
| TCACATACTCTGCTCAAGAT+AGG | 0.490784 | 3.2:-78507973 | MS.gene06561:intron |
| GTTACCTGATCTTAATCTCC+TGG | 0.492932 | 3.2:+78507783 | None:intergenic |
| GATTCGTTAACTGAAGGAAA+TGG | 0.502533 | 3.2:-78507051 | MS.gene06561:intron |
| CCCTGAAATGCAGAAGTACA+AGG | 0.504167 | 3.2:-78508327 | MS.gene06561:CDS |
| CTTCGGCCGCAACAAGGTCT+AGG | 0.508662 | 3.2:+78510504 | None:intergenic |
| ATGTTGTTTGTATTGCAGTC+AGG | 0.511543 | 3.2:+78507129 | None:intergenic |
| GACGCGAAGAAGACCGGTCG+CGG | 0.514863 | 3.2:-78510471 | MS.gene06561:CDS |
| TCGCGTCGACTCTGACTCTT+CGG | 0.529810 | 3.2:+78510487 | None:intergenic |
| TAGACTCCTTATAACTTCAT+CGG | 0.530231 | 3.2:+78508414 | None:intergenic |
| GACCGGTCGCGGTGGTCGAA+CGG | 0.530668 | 3.2:-78510460 | MS.gene06561:CDS |
| CAGTACCGTCTTCTATTGAA+AGG | 0.534240 | 3.2:+78507513 | None:intergenic |
| TTGAATCTGAGTCTCTAAAG+TGG | 0.537211 | 3.2:-78508036 | MS.gene06561:CDS |
| TATGATAAGATCCTGGTCAC+TGG | 0.542139 | 3.2:+78507098 | None:intergenic |
| TCTTCTTTATCGGAATAAGA+AGG | 0.542427 | 3.2:-78507471 | MS.gene06561:CDS |
| TCTGAGTCTCTAAAGTGGCC+AGG | 0.543538 | 3.2:-78508031 | MS.gene06561:CDS |
| AGAGTCGACGCGAAGAAGAC+CGG | 0.545154 | 3.2:-78510477 | MS.gene06561:CDS |
| CAGTACGGTTTCGAAATGTC+AGG | 0.555794 | 3.2:+78507214 | None:intergenic |
| TATGATACGCATGACCCAAA+AGG | 0.557194 | 3.2:-78508677 | MS.gene06561:CDS |
| GTGAAGAATATGGAAGGTAC+CGG | 0.559590 | 3.2:-78510546 | None:intergenic |
| TCATCAAACTCTACGAAACC+TGG | 0.562829 | 3.2:+78508013 | None:intergenic |
| GATCGCAATGAAATCTATAC+GGG | 0.565753 | 3.2:-78506253 | MS.gene06561:CDS |
| AGCAAGCAATAGTTCTCCAA+TGG | 0.570142 | 3.2:-78506404 | MS.gene06561:CDS |
| TTTGTCTTACAGCATATACA+AGG | 0.570671 | 3.2:-78507858 | MS.gene06561:intron |
| AGACGGGGTAAACCAGATGC+TGG | 0.576116 | 3.2:-78508070 | MS.gene06561:CDS |
| ACGTCCAGGAGATTAAGATC+AGG | 0.585658 | 3.2:-78507787 | MS.gene06561:intron |
| CTGACTCTTCGGCCGCAACA+AGG | 0.586343 | 3.2:+78510498 | None:intergenic |
| GTTGTTCAGATACATCAGAC+GGG | 0.587956 | 3.2:-78508086 | MS.gene06561:intron |
| AGTAGGATATGATAAGATCC+TGG | 0.588379 | 3.2:+78507091 | None:intergenic |
| TGTTGTTCAGATACATCAGA+CGG | 0.594045 | 3.2:-78508087 | MS.gene06561:intron |
| AAAATCCTTTCAATAGAAGA+CGG | 0.594057 | 3.2:-78507518 | MS.gene06561:CDS |
| AGTTCCACACAGCCACAGTA+CGG | 0.595254 | 3.2:+78507199 | None:intergenic |
| TCTGACGATTCGTTAACTGA+AGG | 0.595644 | 3.2:-78507057 | MS.gene06561:CDS |
| GAAAGCATGTCTCCAAAATG+AGG | 0.597812 | 3.2:-78506327 | MS.gene06561:CDS |
| TCTTTATCGGAATAAGAAGG+TGG | 0.601059 | 3.2:-78507468 | MS.gene06561:CDS |
| GTGGCTGTGTGGAACTTCCG+TGG | 0.603234 | 3.2:-78507192 | MS.gene06561:CDS |
| CCCAAAAGGTCCTTCGTCTG+TGG | 0.607401 | 3.2:-78508663 | MS.gene06561:CDS |
| TGCTGTGACAGTTCTTCAGG+CGG | 0.607506 | 3.2:-78506370 | MS.gene06561:CDS |
| CATATATATAACCAGTGACC+AGG | 0.608399 | 3.2:-78507109 | MS.gene06561:CDS |
| GAGAGCGGTAATATCTTCCA+AGG | 0.611956 | 3.2:+78506288 | None:intergenic |
| CGGTCGCGGTGGTCGAACGG+TGG | 0.613275 | 3.2:-78510457 | MS.gene06561:CDS |
| ATCTATACGGGAAATAGGCA+CGG | 0.614529 | 3.2:-78506241 | MS.gene06561:CDS |
| GTTTGATGATGTAAATGGGA+AGG | 0.617058 | 3.2:-78507999 | MS.gene06561:CDS |
| TAAAGAAAGATAAATGCAGA+AGG | 0.617128 | 3.2:+78507252 | None:intergenic |
| AAAATCAACAACATGATCCC+AGG | 0.618639 | 3.2:+78507569 | None:intergenic |
| ATCAGAAATGGAGTACAACA+TGG | 0.623758 | 3.2:+78507814 | None:intergenic |
| AGTCAGGATGCCACAAGAGG+TGG | 0.633776 | 3.2:+78507145 | None:intergenic |
| GTTTGTGCAGCATTCAGCCG+AGG | 0.639705 | 3.2:-78508557 | MS.gene06561:intron |
| TGCAGTCAGGATGCCACAAG+AGG | 0.640084 | 3.2:+78507142 | None:intergenic |
| GCGAAGAAGACCGGTCGCGG+TGG | 0.646902 | 3.2:-78510468 | MS.gene06561:CDS |
| AAGAAGTTACAAGCTCTCCA+CGG | 0.664948 | 3.2:+78507175 | None:intergenic |
| GTCAGTCCTAGACCTTGTTG+CGG | 0.664976 | 3.2:-78510510 | MS.gene06561:CDS |
| GTCAGAATCAGCTTTGCAGT+AGG | 0.668522 | 3.2:+78507074 | None:intergenic |
| GACATTTCGAAACCGTACTG+TGG | 0.671777 | 3.2:-78507211 | MS.gene06561:CDS |
| AGGTACCGGAAGAAGAATCA+CGG | 0.678839 | 3.2:-78510532 | MS.gene06561:CDS |
| GAGGTGGTGAAGAATATGGA+AGG | 0.692900 | 3.2:-78510552 | None:intergenic |
| AATGGCAATACCACAGACGA+AGG | 0.699297 | 3.2:+78508653 | None:intergenic |
| GAAACCGTACTGTGGCTGTG+TGG | 0.713236 | 3.2:-78507203 | MS.gene06561:CDS |
| ATCTTCGTCATAGAAGAGAG+CGG | 0.733350 | 3.2:+78506273 | None:intergenic |
| TTGTTCAGATACATCAGACG+GGG | 0.739159 | 3.2:-78508085 | MS.gene06561:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTAAAAAATAGTC+AGG | - | chr3.2:78507887-78507906 | MS.gene06561:intron | 10.0% |
| !!! | TCATTTTTAAAAACATATTA+TGG | + | chr3.2:78507177-78507196 | None:intergenic | 10.0% |
| !!! | TTACTTTTCTTTTTAAATTA+AGG | - | chr3.2:78507148-78507167 | MS.gene06561:CDS | 10.0% |
| !! | TTAAAAATGAATTACTCTTA+AGG | - | chr3.2:78507187-78507206 | MS.gene06561:CDS | 15.0% |
| !!! | AGTTTGGAATAAATATTTAA+AGG | + | chr3.2:78510059-78510078 | None:intergenic | 15.0% |
| !!! | ATTCTTTTAAAGTTATGATA+TGG | - | chr3.2:78507689-78507708 | MS.gene06561:intron | 15.0% |
| !! | AAATTAATTGTAATCCAATC+AGG | + | chr3.2:78506616-78506635 | None:intergenic | 20.0% |
| !! | AAGATATGCAAATATGTATT+TGG | - | chr3.2:78509876-78509895 | MS.gene06561:intron | 20.0% |
| !! | ATATTGCAAACAAAATGAAA+AGG | + | chr3.2:78508248-78508267 | None:intergenic | 20.0% |
| !! | CTTATAATAAGCCTTTATAT+AGG | + | chr3.2:78506669-78506688 | None:intergenic | 20.0% |
| !!! | CATAACTTTAAAAGAATTGA+AGG | + | chr3.2:78507686-78507705 | None:intergenic | 20.0% |
| !!! | TACTTTTTTGTTTGTTTTTG+TGG | - | chr3.2:78507763-78507782 | MS.gene06561:intron | 20.0% |
| !!! | TATGTATATTTTTTGCTGTA+AGG | - | chr3.2:78510219-78510238 | MS.gene06561:intron | 20.0% |
| ! | AAAACACAAATACTAAAACC+TGG | + | chr3.2:78508631-78508650 | None:intergenic | 25.0% |
| ! | AAAATCCTTTCAATAGAAGA+CGG | - | chr3.2:78509235-78509254 | MS.gene06561:intron | 25.0% |
| ! | AACAAACAAAAAAGTAGTAC+AGG | + | chr3.2:78507759-78507778 | None:intergenic | 25.0% |
| ! | AAGAAAATAGTGGTAAGTAT+GGG | + | chr3.2:78506858-78506877 | None:intergenic | 25.0% |
| ! | ATAAATAAATCCATCAGACA+GGG | + | chr3.2:78508048-78508067 | None:intergenic | 25.0% |
| ! | ATAAGCCTTTATATAGGATA+AGG | + | chr3.2:78506663-78506682 | None:intergenic | 25.0% |
| ! | ATACTCGAAGAAAGTAAAAA+AGG | + | chr3.2:78509119-78509138 | None:intergenic | 25.0% |
| ! | ATCAAAGATTATTGAGATTG+TGG | - | chr3.2:78508135-78508154 | MS.gene06561:intron | 25.0% |
| ! | ATCCTTTGATTATTGATGAA+TGG | - | chr3.2:78506891-78506910 | MS.gene06561:intron | 25.0% |
| ! | ATGCACAATAACTAAAAGAA+AGG | - | chr3.2:78508581-78508600 | MS.gene06561:CDS | 25.0% |
| ! | TAAACCCTTATCCTATATAA+AGG | - | chr3.2:78506655-78506674 | MS.gene06561:intron | 25.0% |
| ! | TAAAGAAAGATAAATGCAGA+AGG | + | chr3.2:78509504-78509523 | None:intergenic | 25.0% |
| ! | TAAGAAAATAGTGGTAAGTA+TGG | + | chr3.2:78506859-78506878 | None:intergenic | 25.0% |
| ! | TAAGCCTTTATATAGGATAA+GGG | + | chr3.2:78506662-78506681 | None:intergenic | 25.0% |
| ! | TACTTACATCAAGAATTTGA+AGG | + | chr3.2:78509363-78509382 | None:intergenic | 25.0% |
| ! | TAGCTATGTTAAGAAAATAG+TGG | + | chr3.2:78506868-78506887 | None:intergenic | 25.0% |
| ! | TATAAATAAATCCATCAGAC+AGG | + | chr3.2:78508049-78508068 | None:intergenic | 25.0% |
| ! | TATATGCTGTAAGACAAAAA+AGG | + | chr3.2:78508893-78508912 | None:intergenic | 25.0% |
| ! | TATATTATGCAATTATACCC+TGG | + | chr3.2:78508835-78508854 | None:intergenic | 25.0% |
| ! | TGACAGAAAAGGAATAAATT+AGG | + | chr3.2:78509735-78509754 | None:intergenic | 25.0% |
| ! | TTAAATAAGTCAATCCAAAG+AGG | - | chr3.2:78506832-78506851 | MS.gene06561:intron | 25.0% |
| ! | TTATTAGAAAGTGACAGAAA+AGG | + | chr3.2:78509746-78509765 | None:intergenic | 25.0% |
| ! | TTCCATTCATCAATAATCAA+AGG | + | chr3.2:78506896-78506915 | None:intergenic | 25.0% |
| ! | TTGATCTGCTAAACATAATA+TGG | - | chr3.2:78510142-78510161 | MS.gene06561:intron | 25.0% |
| ! | TTGATTATTGATGAATGGAA+TGG | - | chr3.2:78506896-78506915 | MS.gene06561:intron | 25.0% |
| !! | ATTGTGCATTTTGAATGATT+TGG | + | chr3.2:78508570-78508589 | None:intergenic | 25.0% |
| !! | CTCACTTACGTATAAATTTT+AGG | - | chr3.2:78509431-78509450 | MS.gene06561:intron | 25.0% |
| !! | TCTATTGAAAGGATTTTAAG+TGG | + | chr3.2:78509232-78509251 | None:intergenic | 25.0% |
| !! | TTTCTTTCTTATACTCGTTT+TGG | - | chr3.2:78506526-78506545 | MS.gene06561:intron | 25.0% |
| !! | TTTGATCTTTTTCTCAGAAA+TGG | + | chr3.2:78508121-78508140 | None:intergenic | 25.0% |
| !!! | AATGCTTTTTGTATAAAGCA+AGG | - | chr3.2:78507009-78507028 | MS.gene06561:intron | 25.0% |
| !!! | ATGCTTTTTGTATAAAGCAA+GGG | - | chr3.2:78507010-78507029 | MS.gene06561:intron | 25.0% |
| !!! | ATTTTTGAAACTTGTAGCTT+AGG | - | chr3.2:78509796-78509815 | MS.gene06561:intron | 25.0% |
| !!! | CTATTGAAAGGATTTTAAGT+GGG | + | chr3.2:78509231-78509250 | None:intergenic | 25.0% |
| !!! | CTGAAAATTTAGGTTCTTTT+TGG | - | chr3.2:78509828-78509847 | MS.gene06561:intron | 25.0% |
| !!! | TAGAGTTTGATGATGTAAAT+GGG | - | chr3.2:78508750-78508769 | MS.gene06561:intron | 25.0% |
| !!! | TGTCTGATGGATTTATTTAT+AGG | - | chr3.2:78508048-78508067 | MS.gene06561:CDS | 25.0% |
| !!! | TTTTTTGTTTGTTTTTGTGG+TGG | - | chr3.2:78507766-78507785 | MS.gene06561:intron | 25.0% |
| AAAACAATATCCTTGAGTGA+GGG | + | chr3.2:78508500-78508519 | None:intergenic | 30.0% | |
| AATACAAAATTCTCCTCAGT+TGG | - | chr3.2:78507420-78507439 | MS.gene06561:CDS | 30.0% | |
| AGAAGATTCATAATCACAGT+AGG | - | chr3.2:78510014-78510033 | MS.gene06561:intron | 30.0% | |
| AGATCGCAATGAAATCTATA+CGG | - | chr3.2:78510499-78510518 | MS.gene06561:CDS | 30.0% | |
| ATACAAAATTCTCCTCAGTT+GGG | - | chr3.2:78507421-78507440 | MS.gene06561:CDS | 30.0% | |
| ATATCAACATTTGCATTTCC+AGG | - | chr3.2:78508610-78508629 | MS.gene06561:CDS | 30.0% | |
| ATCATCAAACAAGAGAAAAG+TGG | + | chr3.2:78509150-78509169 | None:intergenic | 30.0% | |
| ATGAAATCTATACGGGAAAT+AGG | - | chr3.2:78510507-78510526 | MS.gene06561:CDS | 30.0% | |
| CACTGACATAAACATTTGTA+AGG | + | chr3.2:78506805-78506824 | None:intergenic | 30.0% | |
| CTTACAAATGTTTATGTCAG+TGG | - | chr3.2:78506803-78506822 | MS.gene06561:intron | 30.0% | |
| GGGTAGGAATTATAAAACAA+TGG | + | chr3.2:78508471-78508490 | None:intergenic | 30.0% | |
| GTTGGAAATATAGGAGAAAA+TGG | + | chr3.2:78507622-78507641 | None:intergenic | 30.0% | |
| TAAAACAATATCCTTGAGTG+AGG | + | chr3.2:78508501-78508520 | None:intergenic | 30.0% | |
| TAAAATGTTGCTGACATTGA+TGG | + | chr3.2:78510303-78510322 | None:intergenic | 30.0% | |
| TAAACATTTGTAAGGCCATT+CGG | + | chr3.2:78506797-78506816 | None:intergenic | 30.0% | |
| TAGACTCCTTATAACTTCAT+CGG | + | chr3.2:78508342-78508361 | None:intergenic | 30.0% | |
| TATCAAAACAGGAGAAACAA+AGG | + | chr3.2:78507974-78507993 | None:intergenic | 30.0% | |
| TCAACTAACGAAAAACACAT+GGG | - | chr3.2:78509902-78509921 | MS.gene06561:intron | 30.0% | |
| TCAATGATTGTATTGGAAGA+GGG | - | chr3.2:78507449-78507468 | MS.gene06561:CDS | 30.0% | |
| TCATTGCAAATCATTGATGT+CGG | - | chr3.2:78507943-78507962 | MS.gene06561:intron | 30.0% | |
| TCTTATTCCGATAAAGAAGA+TGG | + | chr3.2:78509282-78509301 | None:intergenic | 30.0% | |
| TCTTCTTTATCGGAATAAGA+AGG | - | chr3.2:78509282-78509301 | MS.gene06561:intron | 30.0% | |
| TTATACGTAAGTGAGATATC+TGG | + | chr3.2:78509426-78509445 | None:intergenic | 30.0% | |
| TTATGATATGGTCATTGAGA+GGG | - | chr3.2:78507701-78507720 | MS.gene06561:intron | 30.0% | |
| TTCGAAATGTCAGGAATAAT+TGG | + | chr3.2:78509533-78509552 | None:intergenic | 30.0% | |
| TTTGTCTTACAGCATATACA+AGG | - | chr3.2:78508895-78508914 | MS.gene06561:intron | 30.0% | |
| ! | AAAGAATTGAAGGCTTTGTA+TGG | + | chr3.2:78507676-78507695 | None:intergenic | 30.0% |
| ! | AAATGTGATTTTCGTAGTGT+TGG | - | chr3.2:78507080-78507099 | MS.gene06561:CDS | 30.0% |
| ! | AAGAATTGAAGGCTTTGTAT+GGG | + | chr3.2:78507675-78507694 | None:intergenic | 30.0% |
| ! | AATGTCAGCAACATTTTATC+TGG | - | chr3.2:78510305-78510324 | MS.gene06561:intron | 30.0% |
| ! | AATGTGATTTTCGTAGTGTT+GGG | - | chr3.2:78507081-78507100 | MS.gene06561:CDS | 30.0% |
| ! | ACAACATGGTATAGTTTTTC+AGG | + | chr3.2:78508928-78508947 | None:intergenic | 30.0% |
| ! | AGAACCTAAATTTTCAGATC+TGG | + | chr3.2:78509825-78509844 | None:intergenic | 30.0% |
| ! | TTTATTCCAAACTGACTCTT+TGG | - | chr3.2:78510066-78510085 | MS.gene06561:intron | 30.0% |
| ! | TTTCATTTTCTTGCTTGACA+AGG | + | chr3.2:78509339-78509358 | None:intergenic | 30.0% |
| !! | ACTATTGCTTGCTCTTATTT+TGG | + | chr3.2:78510342-78510361 | None:intergenic | 30.0% |
| !! | CTGATGGATTTATTTATAGG+AGG | - | chr3.2:78508051-78508070 | MS.gene06561:CDS | 30.0% |
| !! | GTAGAGTTTGATGATGTAAA+TGG | - | chr3.2:78508749-78508768 | MS.gene06561:intron | 30.0% |
| !! | TGCTTTTTGTATAAAGCAAG+GGG | - | chr3.2:78507011-78507030 | MS.gene06561:intron | 30.0% |
| !!! | TGAAGTGTGTTTTTTGTTTG+TGG | - | chr3.2:78507817-78507836 | MS.gene06561:CDS | 30.0% |
| !!! | TGTATTTTTTCCTTGAGTGA+GGG | + | chr3.2:78508542-78508561 | None:intergenic | 30.0% |
| AAAAACACATGGGGGTTTAT+TGG | - | chr3.2:78509912-78509931 | MS.gene06561:intron | 35.0% | |
| AAAATCAACAACATGATCCC+AGG | + | chr3.2:78509187-78509206 | None:intergenic | 35.0% | |
| AAAATCCTGACTAAACACAG+TGG | + | chr3.2:78507862-78507881 | None:intergenic | 35.0% | |
| AAACAATATCCTTGAGTGAG+GGG | + | chr3.2:78508499-78508518 | None:intergenic | 35.0% | |
| AAACATTTGTAAGGCCATTC+GGG | + | chr3.2:78506796-78506815 | None:intergenic | 35.0% | |
| AAACTCGCAAACAAATCCTA+AGG | + | chr3.2:78507298-78507317 | None:intergenic | 35.0% | |
| AAATCCTGACTAAACACAGT+GGG | + | chr3.2:78507861-78507880 | None:intergenic | 35.0% | |
| AACTAACGAAAAACACATGG+GGG | - | chr3.2:78509904-78509923 | MS.gene06561:intron | 35.0% | |
| AACTCGCAAACAAATCCTAA+GGG | + | chr3.2:78507297-78507316 | None:intergenic | 35.0% | |
| AAGAAACAGATGACATTGAG+AGG | - | chr3.2:78507367-78507386 | MS.gene06561:intron | 35.0% | |
| ACCAAAAGAATACCAACTCT+TGG | - | chr3.2:78510099-78510118 | MS.gene06561:intron | 35.0% | |
| AGAAAACTCTTTCGTAAACG+CGG | - | chr3.2:78509023-78509042 | MS.gene06561:intron | 35.0% | |
| AGAAACAGATGACATTGAGA+GGG | - | chr3.2:78507368-78507387 | MS.gene06561:intron | 35.0% | |
| AGACTCCTTATAACTTCATC+GGG | + | chr3.2:78508341-78508360 | None:intergenic | 35.0% | |
| AGGAGCAACTATGTTCATAA+AGG | - | chr3.2:78510239-78510258 | MS.gene06561:intron | 35.0% | |
| AGTAGGATATGATAAGATCC+TGG | + | chr3.2:78509665-78509684 | None:intergenic | 35.0% | |
| ATACACATTGTGTGAGACAA+TGG | - | chr3.2:78509765-78509784 | MS.gene06561:intron | 35.0% | |
| ATCAGAAATGGAGTACAACA+TGG | + | chr3.2:78508942-78508961 | None:intergenic | 35.0% | |
| ATGGGAATCAAAAAGTAGCA+TGG | - | chr3.2:78507052-78507071 | MS.gene06561:CDS | 35.0% | |
| CAACTAACGAAAAACACATG+GGG | - | chr3.2:78509903-78509922 | MS.gene06561:intron | 35.0% | |
| CATATATATAACCAGTGACC+AGG | - | chr3.2:78509644-78509663 | MS.gene06561:intron | 35.0% | |
| CATGTCTTGCTTATCAAAAC+AGG | + | chr3.2:78507985-78508004 | None:intergenic | 35.0% | |
| CATTTCTGATAAAAACGTCC+AGG | - | chr3.2:78508952-78508971 | MS.gene06561:intron | 35.0% | |
| CGTTCAACCATCTTCTTTAT+CGG | - | chr3.2:78509272-78509291 | MS.gene06561:intron | 35.0% | |
| CTCAACTAACGAAAAACACA+TGG | - | chr3.2:78509901-78509920 | MS.gene06561:intron | 35.0% | |
| CTCAATGATTGTATTGGAAG+AGG | - | chr3.2:78507448-78507467 | MS.gene06561:CDS | 35.0% | |
| GATCGCAATGAAATCTATAC+GGG | - | chr3.2:78510500-78510519 | MS.gene06561:CDS | 35.0% | |
| GATTCGTTAACTGAAGGAAA+TGG | - | chr3.2:78509702-78509721 | MS.gene06561:intron | 35.0% | |
| GATTTCTCGTTATTAGTCCT+GGG | - | chr3.2:78509167-78509186 | MS.gene06561:intron | 35.0% | |
| GTCACCAGATCTGAAAATTT+AGG | - | chr3.2:78509818-78509837 | MS.gene06561:intron | 35.0% | |
| GTTATGATATGGTCATTGAG+AGG | - | chr3.2:78507700-78507719 | MS.gene06561:intron | 35.0% | |
| TAACCTGCAAACGAATATTG+CGG | + | chr3.2:78506416-78506435 | None:intergenic | 35.0% | |
| TACAAAATTCTCCTCAGTTG+GGG | - | chr3.2:78507422-78507441 | MS.gene06561:CDS | 35.0% | |
| TACACATTGTGTGAGACAAT+GGG | - | chr3.2:78509766-78509785 | MS.gene06561:intron | 35.0% | |
| TATGAAGCTATATGCCTGAT+TGG | - | chr3.2:78506599-78506618 | MS.gene06561:intron | 35.0% | |
| TATGATATGGTCATTGAGAG+GGG | - | chr3.2:78507702-78507721 | MS.gene06561:intron | 35.0% | |
| TCATGACTCAACAGTAATAC+AGG | + | chr3.2:78507800-78507819 | None:intergenic | 35.0% | |
| TCTTTATCGGAATAAGAAGG+TGG | - | chr3.2:78509285-78509304 | MS.gene06561:intron | 35.0% | |
| TGATTTCTCGTTATTAGTCC+TGG | - | chr3.2:78509166-78509185 | MS.gene06561:intron | 35.0% | |
| TGCAGAAACTCATTTCAACT+TGG | - | chr3.2:78509978-78509997 | MS.gene06561:intron | 35.0% | |
| TGTTGTTCAGATACATCAGA+CGG | - | chr3.2:78508666-78508685 | MS.gene06561:CDS | 35.0% | |
| TTAGCAGATCAAGTCAAAAC+CGG | + | chr3.2:78510134-78510153 | None:intergenic | 35.0% | |
| TTTGATTCCCATTGTCACAT+TGG | + | chr3.2:78507044-78507063 | None:intergenic | 35.0% | |
| ! | AGAGCTTGTAACTTCTTTTG+AGG | - | chr3.2:78509584-78509603 | MS.gene06561:intron | 35.0% |
| ! | ATGTGATTTTCGTAGTGTTG+GGG | - | chr3.2:78507082-78507101 | MS.gene06561:CDS | 35.0% |
| ! | ATGTTGTTTGTATTGCAGTC+AGG | + | chr3.2:78509627-78509646 | None:intergenic | 35.0% |
| ! | ATTGTATTGGAAGAGGGTTT+TGG | - | chr3.2:78507455-78507474 | MS.gene06561:CDS | 35.0% |
| ! | CTGGACGTTTTTATCAGAAA+TGG | + | chr3.2:78508954-78508973 | None:intergenic | 35.0% |
| ! | TATGTTTGGATGGATGGTTT+TGG | - | chr3.2:78507105-78507124 | MS.gene06561:CDS | 35.0% |
| ! | TCAGGTAACTTTTCTTGATG+TGG | - | chr3.2:78508984-78509003 | MS.gene06561:intron | 35.0% |
| ! | TTAGGATTTGTTTGCGAGTT+TGG | - | chr3.2:78507297-78507316 | MS.gene06561:CDS | 35.0% |
| ! | TTGAATCTGAGTCTCTAAAG+TGG | - | chr3.2:78508717-78508736 | MS.gene06561:intron | 35.0% |
| ! | TTGGTGGTTATGAAGAAAGA+AGG | - | chr3.2:78509931-78509950 | MS.gene06561:intron | 35.0% |
| ! | TTGTATTGGAAGAGGGTTTT+GGG | - | chr3.2:78507456-78507475 | MS.gene06561:CDS | 35.0% |
| ! | TTTTCATAAGTTCTCCCGAA+TGG | - | chr3.2:78506779-78506798 | MS.gene06561:intron | 35.0% |
| !! | AAAGGATTTTAAGTGGGACA+TGG | + | chr3.2:78509225-78509244 | None:intergenic | 35.0% |
| !! | AGGTTGAGTTTGTTAGGTTA+TGG | - | chr3.2:78506482-78506501 | MS.gene06561:intron | 35.0% |
| !! | GTTGTTTTCACAAGCTATCA+TGG | - | chr3.2:78506710-78506729 | MS.gene06561:intron | 35.0% |
| !! | GTTTGATGATGTAAATGGGA+AGG | - | chr3.2:78508754-78508773 | MS.gene06561:intron | 35.0% |
| !!! | CTGTATTTTTTCCTTGAGTG+AGG | + | chr3.2:78508543-78508562 | None:intergenic | 35.0% |
| AAGAAGTTACAAGCTCTCCA+CGG | + | chr3.2:78509581-78509600 | None:intergenic | 40.0% | |
| AAGCTATCATGGAGAGCTTA+TGG | - | chr3.2:78506721-78506740 | MS.gene06561:intron | 40.0% | |
| ACAAAATTCTCCTCAGTTGG+GGG | - | chr3.2:78507423-78507442 | MS.gene06561:CDS | 40.0% | |
| ACAAACTCAACCTCGTGAAA+TGG | + | chr3.2:78506475-78506494 | None:intergenic | 40.0% | |
| AGCAAGCAATAGTTCTCCAA+TGG | - | chr3.2:78510349-78510368 | MS.gene06561:intron | 40.0% | |
| ATCTATACGGGAAATAGGCA+CGG | - | chr3.2:78510512-78510531 | MS.gene06561:CDS | 40.0% | |
| ATCTTCGTCATAGAAGAGAG+CGG | + | chr3.2:78510483-78510502 | None:intergenic | 40.0% | |
| ATGATGCCAAAGAGTCAGTT+TGG | + | chr3.2:78510075-78510094 | None:intergenic | 40.0% | |
| ATTCCGCAATATTCGTTTGC+AGG | - | chr3.2:78506410-78506429 | MS.gene06561:CDS | 40.0% | |
| ATTTCCCACTGTGTTTAGTC+AGG | - | chr3.2:78507854-78507873 | MS.gene06561:intron | 40.0% | |
| ATTTGTTTGCGAGTTTGGAG+GGG | - | chr3.2:78507302-78507321 | MS.gene06561:CDS | 40.0% | |
| CAGTACCGTCTTCTATTGAA+AGG | + | chr3.2:78509243-78509262 | None:intergenic | 40.0% | |
| CCTTGTACTTCTGCATTTCA+GGG | + | chr3.2:78508429-78508448 | None:intergenic | 40.0% | |
| GAAACAGATGACATTGAGAG+GGG | - | chr3.2:78507369-78507388 | MS.gene06561:intron | 40.0% | |
| GCTGCATATGCTTATACTAG+TGG | + | chr3.2:78506967-78506986 | None:intergenic | 40.0% | |
| GGGGAACTCAATGATTGTAT+TGG | - | chr3.2:78507442-78507461 | MS.gene06561:CDS | 40.0% | |
| GGGTTGAGAGAATACAGATT+GGG | - | chr3.2:78507722-78507741 | MS.gene06561:intron | 40.0% | |
| GGTAATATCTTCCAAGGCTT+CGG | + | chr3.2:78510462-78510481 | None:intergenic | 40.0% | |
| GGTTGAGAGAATACAGATTG+GGG | - | chr3.2:78507723-78507742 | MS.gene06561:intron | 40.0% | |
| GTTACCTGATCTTAATCTCC+TGG | + | chr3.2:78508973-78508992 | None:intergenic | 40.0% | |
| GTTGAGAGAATACAGATTGG+GGG | - | chr3.2:78507724-78507743 | MS.gene06561:intron | 40.0% | |
| GTTGTTCAGATACATCAGAC+GGG | - | chr3.2:78508667-78508686 | MS.gene06561:CDS | 40.0% | |
| TAGTATAAGCATATGCAGCC+TGG | - | chr3.2:78506968-78506987 | MS.gene06561:intron | 40.0% | |
| TATGATAAGATCCTGGTCAC+TGG | + | chr3.2:78509658-78509677 | None:intergenic | 40.0% | |
| TATGATACGCATGACCCAAA+AGG | - | chr3.2:78508076-78508095 | MS.gene06561:CDS | 40.0% | |
| TCACATACTCTGCTCAAGAT+AGG | - | chr3.2:78508780-78508799 | MS.gene06561:intron | 40.0% | |
| TCAGTCCCGATGAAGTTATA+AGG | - | chr3.2:78508333-78508352 | MS.gene06561:CDS | 40.0% | |
| TCATCAAACTCTACGAAACC+TGG | + | chr3.2:78508743-78508762 | None:intergenic | 40.0% | |
| TCCTTGTACTTCTGCATTTC+AGG | + | chr3.2:78508430-78508449 | None:intergenic | 40.0% | |
| TCGTAAACGCGGTTTATAGT+TGG | - | chr3.2:78509034-78509053 | MS.gene06561:intron | 40.0% | |
| TCTGACGATTCGTTAACTGA+AGG | - | chr3.2:78509696-78509715 | MS.gene06561:intron | 40.0% | |
| TGTGTCACCAATGTGACAAT+GGG | - | chr3.2:78507034-78507053 | MS.gene06561:intron | 40.0% | |
| TTGTTCAGATACATCAGACG+GGG | - | chr3.2:78508668-78508687 | MS.gene06561:CDS | 40.0% | |
| TTTCGTGTTTCCATTTCACG+AGG | - | chr3.2:78506462-78506481 | MS.gene06561:CDS | 40.0% | |
| ! | ACAAATCCTAAGGGTACGTT+TGG | + | chr3.2:78507288-78507307 | None:intergenic | 40.0% |
| ! | CAAATCCTAAGGGTACGTTT+GGG | + | chr3.2:78507287-78507306 | None:intergenic | 40.0% |
| ! | CTCTGCTAATTTTATGCAGC+GGG | - | chr3.2:78510275-78510294 | MS.gene06561:intron | 40.0% |
| ! | CTTTGGAGGGTTGGAAATAT+AGG | + | chr3.2:78507631-78507650 | None:intergenic | 40.0% |
| ! | GAAAGCATGTCTCCAAAATG+AGG | - | chr3.2:78510426-78510445 | MS.gene06561:intron | 40.0% |
| ! | GATTTGTTTGCGAGTTTGGA+GGG | - | chr3.2:78507301-78507320 | MS.gene06561:CDS | 40.0% |
| ! | GCTCTGCTAATTTTATGCAG+CGG | - | chr3.2:78510274-78510293 | MS.gene06561:intron | 40.0% |
| ! | TCCTGAAACTTCTTTTGCCA+GGG | - | chr3.2:78508815-78508834 | MS.gene06561:intron | 40.0% |
| ! | TGTATTGGAAGAGGGTTTTG+GGG | - | chr3.2:78507457-78507476 | MS.gene06561:CDS | 40.0% |
| ! | TTCACGAGGTTGAGTTTGTT+AGG | - | chr3.2:78506476-78506495 | MS.gene06561:intron | 40.0% |
| ! | TTTGGGAGTTGTGTTTTGCA+AGG | + | chr3.2:78507270-78507289 | None:intergenic | 40.0% |
| !! | ACCAGTTACTAGTTCTACCT+CGG | + | chr3.2:78508216-78508235 | None:intergenic | 40.0% |
| !! | TTCATAAAGGCAGTACTGAC+AGG | - | chr3.2:78510252-78510271 | MS.gene06561:intron | 40.0% |
| !!! | CAACTCTTGGCTCTTTTTTC+CGG | - | chr3.2:78510112-78510131 | MS.gene06561:intron | 40.0% |
| !!! | GCCAAGAGTTGGTATTCTTT+TGG | + | chr3.2:78510103-78510122 | None:intergenic | 40.0% |
| !!! | TTTGGATGGATGGTTTTGGA+GGG | - | chr3.2:78507109-78507128 | MS.gene06561:CDS | 40.0% |
| AAAAGAGCAAAGCCAGCATC+TGG | + | chr3.2:78508698-78508717 | None:intergenic | 45.0% | |
| AACACATGGGGGTTTATTGG+TGG | - | chr3.2:78509915-78509934 | MS.gene06561:intron | 45.0% | |
| AATGGCAATACCACAGACGA+AGG | + | chr3.2:78508103-78508122 | None:intergenic | 45.0% | |
| ACCCTGGCAAAAGAAGTTTC+AGG | + | chr3.2:78508819-78508838 | None:intergenic | 45.0% | |
| ACGTCCAGGAGATTAAGATC+AGG | - | chr3.2:78508966-78508985 | MS.gene06561:intron | 45.0% | |
| ACTGACCGTGATTCTTCTTC+CGG | + | chr3.2:78506229-78506248 | None:intergenic | 45.0% | |
| AGTTGCTGTGACAGTTCTTC+AGG | - | chr3.2:78510380-78510399 | MS.gene06561:intron | 45.0% | |
| CAGTACGGTTTCGAAATGTC+AGG | + | chr3.2:78509542-78509561 | None:intergenic | 45.0% | |
| CGGAAAAAAGAGCCAAGAGT+TGG | + | chr3.2:78510114-78510133 | None:intergenic | 45.0% | |
| CTTTGTATGGGAGTTTGGAG+GGG | + | chr3.2:78507663-78507682 | None:intergenic | 45.0% | |
| GAATACAAGCATCAGACACC+AGG | + | chr3.2:78506989-78507008 | None:intergenic | 45.0% | |
| GACATTTCGAAACCGTACTG+TGG | - | chr3.2:78509542-78509561 | MS.gene06561:intron | 45.0% | |
| GAGAGCGGTAATATCTTCCA+AGG | + | chr3.2:78510468-78510487 | None:intergenic | 45.0% | |
| GCTTTGTATGGGAGTTTGGA+GGG | + | chr3.2:78507664-78507683 | None:intergenic | 45.0% | |
| GGAAAAAAGGAAGGAGCAAG+TGG | - | chr3.2:78507344-78507363 | MS.gene06561:intron | 45.0% | |
| GGGGTTGAGAGAATACAGAT+TGG | - | chr3.2:78507721-78507740 | MS.gene06561:intron | 45.0% | |
| GTCAGAATCAGCTTTGCAGT+AGG | + | chr3.2:78509682-78509701 | None:intergenic | 45.0% | |
| GTGTGTCACCAATGTGACAA+TGG | - | chr3.2:78507033-78507052 | MS.gene06561:intron | 45.0% | |
| TCCTTGAGTGAGGGTAGTAA+GGG | + | chr3.2:78508533-78508552 | None:intergenic | 45.0% | |
| TTCCTTGAGTGAGGGTAGTA+AGG | + | chr3.2:78508534-78508553 | None:intergenic | 45.0% | |
| TTGGGGTATGTTTGGATGGA+TGG | - | chr3.2:78507099-78507118 | MS.gene06561:CDS | 45.0% | |
| TTTGTTTGCGAGTTTGGAGG+GGG | - | chr3.2:78507303-78507322 | MS.gene06561:CDS | 45.0% | |
| ! | ACGCGGTTTATAGTTGGTCT+TGG | - | chr3.2:78509040-78509059 | MS.gene06561:intron | 45.0% |
| ! | ACTAAAAGCACGATCACGCT+TGG | + | chr3.2:78506370-78506389 | None:intergenic | 45.0% |
| ! | AGTGTTGGGGTATGTTTGGA+TGG | - | chr3.2:78507095-78507114 | MS.gene06561:CDS | 45.0% |
| ! | CCCTGAAATGCAGAAGTACA+AGG | - | chr3.2:78508426-78508445 | MS.gene06561:CDS | 45.0% |
| ! | GAAGGCTTTGTATGGGAGTT+TGG | + | chr3.2:78507668-78507687 | None:intergenic | 45.0% |
| ! | GGATTTGTTTGCGAGTTTGG+AGG | - | chr3.2:78507300-78507319 | MS.gene06561:CDS | 45.0% |
| ! | GTCCTGAAACTTCTTTTGCC+AGG | - | chr3.2:78508814-78508833 | MS.gene06561:intron | 45.0% |
| ! | TCGTAGTGTTGGGGTATGTT+TGG | - | chr3.2:78507091-78507110 | MS.gene06561:CDS | 45.0% |
| !! | AGGTACCGGAAGAAGAATCA+CGG | - | chr3.2:78506221-78506240 | MS.gene06561:CDS | 45.0% |
| !! | GTATTGGAAGAGGGTTTTGG+GGG | - | chr3.2:78507458-78507477 | MS.gene06561:CDS | 45.0% |
| !!! | GTTTGGATGGATGGTTTTGG+AGG | - | chr3.2:78507108-78507127 | MS.gene06561:CDS | 45.0% |
| !!! | TATTGGAAGAGGGTTTTGGG+GGG | - | chr3.2:78507459-78507478 | MS.gene06561:CDS | 45.0% |
| !!! | TTGGATGGATGGTTTTGGAG+GGG | - | chr3.2:78507110-78507129 | MS.gene06561:CDS | 45.0% |
| !!! | ATTTTTTTAAAATATCAAAT+AGG | - | chr3.2:78507225-78507244 | MS.gene06561:CDS | 5.0% |
| ACATGTTGTGCCCTGTCTGA+TGG | - | chr3.2:78508035-78508054 | MS.gene06561:CDS | 50.0% | |
| AGACAGGGCACAACATGTGA+GGG | + | chr3.2:78508033-78508052 | None:intergenic | 50.0% | |
| AGGGGCTTGGGAAAAAAGGA+AGG | - | chr3.2:78507335-78507354 | MS.gene06561:intron | 50.0% | |
| AGTTCCACACAGCCACAGTA+CGG | + | chr3.2:78509557-78509576 | None:intergenic | 50.0% | |
| CAACTCCCAAACGTACCCTT+AGG | - | chr3.2:78507279-78507298 | MS.gene06561:CDS | 50.0% | |
| CAGATGACATTGAGAGGGGA+AGG | - | chr3.2:78507373-78507392 | MS.gene06561:intron | 50.0% | |
| CAGCAACTGCACTTGTCCAT+TGG | + | chr3.2:78510368-78510387 | None:intergenic | 50.0% | |
| GCCGAGGTAGAACTAGTAAC+TGG | - | chr3.2:78508212-78508231 | MS.gene06561:intron | 50.0% | |
| GTCAGTCCTAGACCTTGTTG+CGG | - | chr3.2:78506243-78506262 | MS.gene06561:CDS | 50.0% | |
| GTGGTAAGTATGGGCCTCTT+TGG | + | chr3.2:78506849-78506868 | None:intergenic | 50.0% | |
| TCATTGAGTTCCCCCAACTG+AGG | + | chr3.2:78507436-78507455 | None:intergenic | 50.0% | |
| TCCCTTACTACCCTCACTCA+AGG | - | chr3.2:78508529-78508548 | MS.gene06561:intron | 50.0% | |
| TGAGTGAGGGTAGTAAGGGA+AGG | + | chr3.2:78508529-78508548 | None:intergenic | 50.0% | |
| TGCTGTGACAGTTCTTCAGG+CGG | - | chr3.2:78510383-78510402 | MS.gene06561:intron | 50.0% | |
| ! | ACCACAGACGAAGGACCTTT+TGG | + | chr3.2:78508094-78508113 | None:intergenic | 50.0% |
| ! | CCACAGACGAAGGACCTTTT+GGG | + | chr3.2:78508093-78508112 | None:intergenic | 50.0% |
| ! | GGCAACTGTGCTCCTCATTT+TGG | + | chr3.2:78510441-78510460 | None:intergenic | 50.0% |
| ! | GGCTTTGTATGGGAGTTTGG+AGG | + | chr3.2:78507665-78507684 | None:intergenic | 50.0% |
| ! | GTTTTCGCTCTCGCACAATC+TGG | - | chr3.2:78508172-78508191 | MS.gene06561:intron | 50.0% |
| !! | CTTTTGAGGACCACCTCTTG+TGG | - | chr3.2:78509598-78509617 | MS.gene06561:intron | 50.0% |
| !! | TCTGAGTCTCTAAAGTGGCC+AGG | - | chr3.2:78508722-78508741 | MS.gene06561:intron | 50.0% |
| !!! | AAGAGGGTTTTGGGGGGTTT+TGG | - | chr3.2:78507465-78507484 | MS.gene06561:CDS | 50.0% |
| AGACGGGGTAAACCAGATGC+TGG | - | chr3.2:78508683-78508702 | MS.gene06561:CDS | 55.0% | |
| AGAGTCGACGCGAAGAAGAC+CGG | - | chr3.2:78506276-78506295 | MS.gene06561:CDS | 55.0% | |
| AGTCAGGATGCCACAAGAGG+TGG | + | chr3.2:78509611-78509630 | None:intergenic | 55.0% | |
| ATCCTTGAGTGAGGGGAGTG+AGG | + | chr3.2:78508492-78508511 | None:intergenic | 55.0% | |
| CAGACAGGGCACAACATGTG+AGG | + | chr3.2:78508034-78508053 | None:intergenic | 55.0% | |
| CCCAAAAGGTCCTTCGTCTG+TGG | - | chr3.2:78508090-78508109 | MS.gene06561:intron | 55.0% | |
| GAAACCGTACTGTGGCTGTG+TGG | - | chr3.2:78509550-78509569 | MS.gene06561:intron | 55.0% | |
| GCGGAATCGTTCTTGCGCAT+CGG | + | chr3.2:78506397-78506416 | None:intergenic | 55.0% | |
| GTATGGGAGTTTGGAGGGGA+GGG | + | chr3.2:78507659-78507678 | None:intergenic | 55.0% | |
| GTTTGTGCAGCATTCAGCCG+AGG | - | chr3.2:78508196-78508215 | MS.gene06561:intron | 55.0% | |
| TATGGGAGTTTGGAGGGGAG+GGG | + | chr3.2:78507658-78507677 | None:intergenic | 55.0% | |
| TCCTTGAGTGAGGGGAGTGA+GGG | + | chr3.2:78508491-78508510 | None:intergenic | 55.0% | |
| TGCAGTCAGGATGCCACAAG+AGG | + | chr3.2:78509614-78509633 | None:intergenic | 55.0% | |
| TGTATGGGAGTTTGGAGGGG+AGG | + | chr3.2:78507660-78507679 | None:intergenic | 55.0% | |
| TTTGCGAGTTTGGAGGGGGA+GGG | - | chr3.2:78507307-78507326 | MS.gene06561:intron | 55.0% | |
| ! | ACATTGAGAGGGGAAGGCGT+TGG | - | chr3.2:78507379-78507398 | MS.gene06561:intron | 55.0% |
| ! | GGCACGGTCTAGTTCATGTC+TGG | - | chr3.2:78510528-78510547 | MS.gene06561:CDS | 55.0% |
| !! | ATTGAGAGGGGAAGGCGTTG+GGG | - | chr3.2:78507381-78507400 | MS.gene06561:intron | 55.0% |
| !! | CATTGAGAGGGGAAGGCGTT+GGG | - | chr3.2:78507380-78507399 | MS.gene06561:intron | 55.0% |
| !! | TCGCGTCGACTCTGACTCTT+CGG | + | chr3.2:78506269-78506288 | None:intergenic | 55.0% |
| !!! | AGGGTTTTGGGGGGTTTTGG+AGG | - | chr3.2:78507468-78507487 | MS.gene06561:CDS | 55.0% |
| !!! | GATGGATGGTTTTGGAGGGG+AGG | - | chr3.2:78507113-78507132 | MS.gene06561:CDS | 55.0% |
| !!! | GGGTTTTGGGGGGTTTTGGA+GGG | - | chr3.2:78507469-78507488 | MS.gene06561:CDS | 55.0% |
| !!! | TGGTTTTGGAGGGGAGGAGA+AGG | - | chr3.2:78507119-78507138 | MS.gene06561:CDS | 55.0% |
| ACCCTCACTCCCCTCACTCA+AGG | - | chr3.2:78508487-78508506 | MS.gene06561:intron | 60.0% | |
| CTGACTCTTCGGCCGCAACA+AGG | + | chr3.2:78506258-78506277 | None:intergenic | 60.0% | |
| CTTCGGCCGCAACAAGGTCT+AGG | + | chr3.2:78506252-78506271 | None:intergenic | 60.0% | |
| GAGCACAGTTGCCGAAGCCT+TGG | - | chr3.2:78510448-78510467 | MS.gene06561:CDS | 60.0% | |
| GGGGAGGGGCTTGGGAAAAA+AGG | - | chr3.2:78507331-78507350 | MS.gene06561:intron | 60.0% | |
| GTGGCTGTGTGGAACTTCCG+TGG | - | chr3.2:78509561-78509580 | MS.gene06561:intron | 60.0% | |
| GTTTGCGAGTTTGGAGGGGG+AGG | - | chr3.2:78507306-78507325 | MS.gene06561:intron | 60.0% | |
| TGAGTGAGGGGAGTGAGGGT+AGG | + | chr3.2:78508487-78508506 | None:intergenic | 60.0% | |
| !! | AGGGGAAGGCTTTGGAGGGT+TGG | + | chr3.2:78507640-78507659 | None:intergenic | 60.0% |
| !! | TTGAGAGGGGAAGGCGTTGG+GGG | - | chr3.2:78507382-78507401 | MS.gene06561:intron | 60.0% |
| CGAGTTTGGAGGGGGAGGGA+GGG | - | chr3.2:78507311-78507330 | MS.gene06561:intron | 65.0% | |
| GACGCGAAGAAGACCGGTCG+CGG | - | chr3.2:78506282-78506301 | MS.gene06561:CDS | 65.0% | |
| GAGTTTGGAGGGGGAGGGAG+GGG | - | chr3.2:78507312-78507331 | MS.gene06561:intron | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+AGG | + | chr3.2:78507654-78507673 | None:intergenic | 65.0% | |
| TGGAGGGGAGGGGAAGGCTT+TGG | + | chr3.2:78507648-78507667 | None:intergenic | 65.0% | |
| ! | AGGGGAGGGGAAGGCTTTGG+AGG | + | chr3.2:78507645-78507664 | None:intergenic | 65.0% |
| !! | GGGGAGGGGAAGGCTTTGGA+GGG | + | chr3.2:78507644-78507663 | None:intergenic | 65.0% |
| CACCGTTCGACCACCGCGAC+CGG | + | chr3.2:78506298-78506317 | None:intergenic | 70.0% | |
| CGCGGTGGTCGAACGGTGGA+TGG | - | chr3.2:78506300-78506319 | MS.gene06561:CDS | 70.0% | |
| GACCGGTCGCGGTGGTCGAA+CGG | - | chr3.2:78506293-78506312 | MS.gene06561:CDS | 70.0% | |
| GCGAAGAAGACCGGTCGCGG+TGG | - | chr3.2:78506285-78506304 | MS.gene06561:CDS | 70.0% | |
| GCGAGTTTGGAGGGGGAGGG+AGG | - | chr3.2:78507310-78507329 | MS.gene06561:intron | 70.0% | |
| TTGGAGGGGGAGGGAGGGGA+GGG | - | chr3.2:78507316-78507335 | MS.gene06561:intron | 70.0% | |
| TTTGGAGGGGGAGGGAGGGG+AGG | - | chr3.2:78507315-78507334 | MS.gene06561:intron | 70.0% | |
| CGGTCGCGGTGGTCGAACGG+TGG | - | chr3.2:78506296-78506315 | MS.gene06561:CDS | 75.0% | |
| GGGAGGGAGGGGAGGGGCTT+GGG | - | chr3.2:78507323-78507342 | MS.gene06561:intron | 75.0% | |
| TGGAGGGGGAGGGAGGGGAG+GGG | - | chr3.2:78507317-78507336 | MS.gene06561:intron | 75.0% | |
| ! | GGGGAGGGAGGGGAGGGGCT+TGG | - | chr3.2:78507322-78507341 | MS.gene06561:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78506216 | 78510559 | 78506216 | ID=MS.gene06561 |
| chr3.2 | mRNA | 78506216 | 78510559 | 78506216 | ID=MS.gene06561.t1;Parent=MS.gene06561 |
| chr3.2 | exon | 78510440 | 78510559 | 78510440 | ID=MS.gene06561.t1.exon1;Parent=MS.gene06561.t1 |
| chr3.2 | CDS | 78510440 | 78510559 | 78510440 | ID=cds.MS.gene06561.t1;Parent=MS.gene06561.t1 |
| chr3.2 | exon | 78508558 | 78508705 | 78508558 | ID=MS.gene06561.t1.exon2;Parent=MS.gene06561.t1 |
| chr3.2 | CDS | 78508558 | 78508705 | 78508558 | ID=cds.MS.gene06561.t1;Parent=MS.gene06561.t1 |
| chr3.2 | exon | 78508322 | 78508472 | 78508322 | ID=MS.gene06561.t1.exon3;Parent=MS.gene06561.t1 |
| chr3.2 | CDS | 78508322 | 78508472 | 78508322 | ID=cds.MS.gene06561.t1;Parent=MS.gene06561.t1 |
| chr3.2 | exon | 78507974 | 78508099 | 78507974 | ID=MS.gene06561.t1.exon4;Parent=MS.gene06561.t1 |
| chr3.2 | CDS | 78507974 | 78508099 | 78507974 | ID=cds.MS.gene06561.t1;Parent=MS.gene06561.t1 |
| chr3.2 | exon | 78507788 | 78507868 | 78507788 | ID=MS.gene06561.t1.exon5;Parent=MS.gene06561.t1 |
| chr3.2 | CDS | 78507788 | 78507868 | 78507788 | ID=cds.MS.gene06561.t1;Parent=MS.gene06561.t1 |
| chr3.2 | exon | 78507400 | 78507592 | 78507400 | ID=MS.gene06561.t1.exon6;Parent=MS.gene06561.t1 |
| chr3.2 | CDS | 78507400 | 78507592 | 78507400 | ID=cds.MS.gene06561.t1;Parent=MS.gene06561.t1 |
| chr3.2 | exon | 78507052 | 78507322 | 78507052 | ID=MS.gene06561.t1.exon7;Parent=MS.gene06561.t1 |
| chr3.2 | CDS | 78507052 | 78507322 | 78507052 | ID=cds.MS.gene06561.t1;Parent=MS.gene06561.t1 |
| chr3.2 | exon | 78506216 | 78506481 | 78506216 | ID=MS.gene06561.t1.exon8;Parent=MS.gene06561.t1 |
| chr3.2 | CDS | 78506216 | 78506481 | 78506216 | ID=cds.MS.gene06561.t1;Parent=MS.gene06561.t1 |
| Gene Sequence |
| Protein sequence |
