Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067365.t1 | XP_013443470.1 | 98 | 346 | 7 | 0 | 12 | 357 | 1 | 346 | 7.20E-191 | 676.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067365.t1 | Q9SLN8 | 48.1 | 345 | 174 | 2 | 13 | 357 | 4 | 343 | 8.3e-95 | 348.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067365.t1 | A0A072TVD7 | 98.0 | 346 | 7 | 0 | 12 | 357 | 1 | 346 | 5.2e-191 | 676.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene067365 | -0.812369 | 4.39E-51 | -1.69E-46 |
| MS.gene049150 | MS.gene067365 | 0.807622 | 4.62E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene067365 | 0.812734 | 3.65E-51 | -1.69E-46 |
| MS.gene04933 | MS.gene067365 | 0.802648 | 5.08E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene067365 | 0.804695 | 1.91E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene067365 | 0.835596 | 1.53E-56 | -1.69E-46 |
| MS.gene050560 | MS.gene067365 | 0.825301 | 5.05E-54 | -1.69E-46 |
| MS.gene050787 | MS.gene067365 | 0.850294 | 1.86E-60 | -1.69E-46 |
| MS.gene051525 | MS.gene067365 | 0.808638 | 2.81E-50 | -1.69E-46 |
| MS.gene051568 | MS.gene067365 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene067365 | 0.852865 | 3.49E-61 | -1.69E-46 |
| MS.gene052011 | MS.gene067365 | -0.853475 | 2.33E-61 | -1.69E-46 |
| MS.gene052207 | MS.gene067365 | 0.819966 | 8.80E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene067365 | 0.824853 | 6.44E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene067365 | 0.826399 | 2.77E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene067365 | 0.850036 | 2.20E-60 | -1.69E-46 |
| MS.gene054473 | MS.gene067365 | 0.866376 | 2.98E-65 | -1.69E-46 |
| MS.gene054983 | MS.gene067365 | 0.800875 | 1.17E-48 | -1.69E-46 |
| MS.gene055356 | MS.gene067365 | 0.814314 | 1.64E-51 | -1.69E-46 |
| MS.gene055358 | MS.gene067365 | 0.826731 | 2.31E-54 | -1.69E-46 |
| MS.gene05594 | MS.gene067365 | 0.827047 | 1.94E-54 | -1.69E-46 |
| MS.gene056723 | MS.gene067365 | 0.803657 | 3.14E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene067365 | 0.803196 | 3.91E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene067365 | 0.815954 | 7.10E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene067365 | 0.8674 | 1.41E-65 | -1.69E-46 |
| MS.gene057476 | MS.gene067365 | 0.84926 | 3.63E-60 | -1.69E-46 |
| MS.gene058002 | MS.gene067365 | 0.82286 | 1.89E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene067365 | 0.845979 | 2.90E-59 | -1.69E-46 |
| MS.gene058739 | MS.gene067365 | 0.831658 | 1.47E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene067365 | 0.805322 | 1.41E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene067365 | 0.828896 | 6.97E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene067365 | 0.853872 | 1.79E-61 | -1.69E-46 |
| MS.gene059462 | MS.gene067365 | 0.820903 | 5.36E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene067365 | 0.815542 | 8.77E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene067365 | -0.82574 | 3.98E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 63 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATGTTGTTGGCTGTGC+TGG | 0.188280 | 2.3:+36077246 | MS.gene067365:CDS |
| GCTATTGATGCTCTAGTTAT+TGG | 0.197686 | 2.3:+36076752 | MS.gene067365:CDS |
| CACTTCCATTTCACTTTGAT+TGG | 0.213484 | 2.3:-36075269 | None:intergenic |
| TATACAACATCCATCATATT+TGG | 0.217301 | 2.3:-36077936 | None:intergenic |
| CTTCAAAATGTGACTCCTTT+GGG | 0.232194 | 2.3:-36075333 | None:intergenic |
| ATTGGAAGAGTTGTGACTTC+TGG | 0.238593 | 2.3:+36076770 | MS.gene067365:CDS |
| ACTTATCATCTTGGAATTCT+TGG | 0.247958 | 2.3:+36076908 | MS.gene067365:CDS |
| ATCTAAACTCCACTCTTAAA+AGG | 0.259045 | 2.3:+36077430 | MS.gene067365:CDS |
| AGTACCTGGCCTGGAGTTAA+TGG | 0.270568 | 2.3:-36075499 | None:intergenic |
| TGAGAAAGATGATTTGGTTA+TGG | 0.293811 | 2.3:+36076805 | MS.gene067365:CDS |
| GAGAAAGATGATTTGGTTAT+GGG | 0.296791 | 2.3:+36076806 | MS.gene067365:CDS |
| TTGATTGGTTGCTAACTCTT+TGG | 0.299019 | 2.3:-36075254 | None:intergenic |
| TTTAGTGGACTGTCAGCTTA+TGG | 0.321184 | 2.3:+36077117 | MS.gene067365:CDS |
| TGAAATTTGCAAACCACAAA+AGG | 0.339905 | 2.3:+36077149 | MS.gene067365:CDS |
| ACTTCAAAATGTGACTCCTT+TGG | 0.341261 | 2.3:-36075334 | None:intergenic |
| TAAGTTTGAGAAAGATGATT+TGG | 0.344609 | 2.3:+36076799 | MS.gene067365:CDS |
| CTTTATCACTATGTATTTGT+TGG | 0.353004 | 2.3:-36075293 | None:intergenic |
| AGCATCCCTTCTGCATTTGT+TGG | 0.353234 | 2.3:+36078092 | MS.gene067365:CDS |
| TTTCCACTCACTTATCATCT+TGG | 0.363774 | 2.3:+36076899 | MS.gene067365:CDS |
| TTGGAAGAGTTGTGACTTCT+GGG | 0.364560 | 2.3:+36076771 | MS.gene067365:CDS |
| GCATTTGTTGGACTCTTCAA+TGG | 0.366825 | 2.3:+36078104 | MS.gene067365:CDS |
| GTATTTGTTTCAGCAGCATC+TGG | 0.388705 | 2.3:+36077180 | MS.gene067365:CDS |
| TCTTCGCAATGGTCAGTTGC+AGG | 0.394420 | 2.3:+36078040 | MS.gene067365:CDS |
| GTTGCTAACATGAAAGCATT+TGG | 0.399078 | 2.3:+36077855 | MS.gene067365:CDS |
| GGTTTCTTCCTTGTAGTTGA+AGG | 0.426312 | 2.3:-36077406 | None:intergenic |
| AGCAACCAATCAAAGTGAAA+TGG | 0.440276 | 2.3:+36075264 | MS.gene067365:CDS |
| GGCTGAGTACAGTGTAGTTA+AGG | 0.443379 | 2.3:+36076841 | MS.gene067365:CDS |
| GCTATGTTGTTGGCTGTGCT+GGG | 0.443602 | 2.3:+36077247 | MS.gene067365:CDS |
| TTCATGCGGTTAATAAGATA+AGG | 0.447040 | 2.3:-36075436 | None:intergenic |
| GGATCAGTTGGAAATATTGT+AGG | 0.464203 | 2.3:+36077201 | MS.gene067365:CDS |
| TTTGGTAGAGTGTCTGTTTG+TGG | 0.484471 | 2.3:+36077873 | MS.gene067365:CDS |
| GTGATTGAAGACAGGTCGTT+GGG | 0.490083 | 2.3:+36078062 | MS.gene067365:CDS |
| TAATGGAGTTGCAAAGCTAA+TGG | 0.491094 | 2.3:-36075482 | None:intergenic |
| TTTAGTCTTTCGTTGAAGCC+AGG | 0.494169 | 2.3:+36075370 | MS.gene067365:CDS |
| CAAACCACAAAAGGGTGAAA+AGG | 0.495171 | 2.3:+36077158 | MS.gene067365:CDS |
| ATTTCTGAGTATACTGATGT+TGG | 0.495880 | 2.3:+36077900 | MS.gene067365:CDS |
| AAAATATATGTCAATTCCAT+CGG | 0.496992 | 2.3:-36077799 | None:intergenic |
| TGGTTATGGGAGTATTCACT+TGG | 0.497920 | 2.3:+36076819 | MS.gene067365:CDS |
| GAAATTTGCAAACCACAAAA+GGG | 0.506126 | 2.3:+36077150 | MS.gene067365:CDS |
| AAATATATGTCAATTCCATC+GGG | 0.511624 | 2.3:-36077798 | None:intergenic |
| TTTGCAACTCCATTAACTCC+AGG | 0.512264 | 2.3:+36075490 | MS.gene067365:CDS |
| GAGAGCTTCACCAAATATGA+TGG | 0.514085 | 2.3:+36077926 | MS.gene067365:CDS |
| TCAGCAGCATCTGGATCAGT+TGG | 0.518867 | 2.3:+36077189 | MS.gene067365:CDS |
| CAAATGATGAGTACCTGGCC+TGG | 0.527096 | 2.3:-36075508 | None:intergenic |
| TGATGATGCCTTCAACTACA+AGG | 0.530215 | 2.3:+36077398 | MS.gene067365:CDS |
| TTTAAGAGTGGAGTTTAGAT+CGG | 0.530559 | 2.3:-36077427 | None:intergenic |
| TTCAAAATGTGACTCCTTTG+GGG | 0.537629 | 2.3:-36075332 | None:intergenic |
| ATTATCACTTCATCAGAACC+TGG | 0.540233 | 2.3:-36075388 | None:intergenic |
| AACTCCATTAACTCCAGGCC+AGG | 0.553286 | 2.3:+36075495 | MS.gene067365:CDS |
| TATTTCAGGTACTTTCCCGA+TGG | 0.559890 | 2.3:+36077783 | MS.gene067365:intron |
| ATAAGTGAGTGGAAATTCAA+AGG | 0.566962 | 2.3:-36076891 | None:intergenic |
| AAGAGTCCAACAAATGCAGA+AGG | 0.573531 | 2.3:-36078098 | None:intergenic |
| AGTTGCAGGTGATTGAAGAC+AGG | 0.582175 | 2.3:+36078054 | MS.gene067365:CDS |
| ACATTACTCAAAGAAGAGCT+AGG | 0.588928 | 2.3:+36077372 | MS.gene067365:CDS |
| CTCTTCAATGGAGATAACGT+TGG | 0.603986 | 2.3:+36078116 | MS.gene067365:CDS |
| TACAAGAGAATCACTATCAG+AGG | 0.605599 | 2.3:+36077957 | MS.gene067365:CDS |
| GGTTATGGGAGTATTCACTT+GGG | 0.610812 | 2.3:+36076820 | MS.gene067365:CDS |
| GGTGATTGAAGACAGGTCGT+TGG | 0.611028 | 2.3:+36078061 | MS.gene067365:CDS |
| ACATTGGATTATCTTCGCAA+TGG | 0.613205 | 2.3:+36078029 | MS.gene067365:CDS |
| AGTGGACTGTCAGCTTATGG+AGG | 0.616255 | 2.3:+36077120 | MS.gene067365:CDS |
| ATTCCAAGATGATAAGTGAG+TGG | 0.641007 | 2.3:-36076902 | None:intergenic |
| AGAGTCCAACAAATGCAGAA+GGG | 0.673061 | 2.3:-36078097 | None:intergenic |
| TCGCATTGAAGATTCCCCAA+AGG | 0.693369 | 2.3:+36075318 | MS.gene067365:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAATAATAATTGAGT+TGG | + | chr2.3:36076292-36076311 | MS.gene067365:intron | 10.0% |
| !! | AAAATAATAATAATTGAGTT+GGG | + | chr2.3:36076293-36076312 | MS.gene067365:intron | 10.0% |
| !! | ATTTACAAAAATCATTAATT+AGG | - | chr2.3:36076581-36076600 | None:intergenic | 10.0% |
| !! | TTGAATAAAAATACAAAAAA+AGG | - | chr2.3:36076491-36076510 | None:intergenic | 10.0% |
| !!! | ACAATTTTATATATATTCTA+TGG | + | chr2.3:36076609-36076628 | MS.gene067365:intron | 10.0% |
| !!! | ATATAAAAAGATACATTTTT+TGG | - | chr2.3:36075940-36075959 | None:intergenic | 10.0% |
| !!! | ATTTAAGTTAGAATTAAAAA+AGG | - | chr2.3:36075856-36075875 | None:intergenic | 10.0% |
| !!! | TATAAAAAGATACATTTTTT+GGG | - | chr2.3:36075939-36075958 | None:intergenic | 10.0% |
| !!! | TTGATTTATTTGTTAATAAT+TGG | + | chr2.3:36075569-36075588 | MS.gene067365:intron | 10.0% |
| !! | AAACAAATAAAAATGAAAAC+AGG | - | chr2.3:36075674-36075693 | None:intergenic | 15.0% |
| !! | CTAAGATAAAAATAAATTCA+TGG | - | chr2.3:36077349-36077368 | None:intergenic | 15.0% |
| !!! | AAATAATAATAATTGAGTTG+GGG | + | chr2.3:36076294-36076313 | MS.gene067365:intron | 15.0% |
| !!! | ATATATATTCTATGGATTTT+TGG | + | chr2.3:36076617-36076636 | MS.gene067365:intron | 15.0% |
| !!! | CATGAATTTATTTTTATCTT+AGG | + | chr2.3:36077347-36077366 | MS.gene067365:intron | 15.0% |
| !!! | TAATTTGTTTTGAATATTTC+AGG | + | chr2.3:36077769-36077788 | MS.gene067365:intron | 15.0% |
| !! | AAAATATATGTCAATTCCAT+CGG | - | chr2.3:36077802-36077821 | None:intergenic | 20.0% |
| !! | ACAAAAATCATTAATTAGGA+TGG | - | chr2.3:36076577-36076596 | None:intergenic | 20.0% |
| !! | ATAAAACAAATCAAACACTA+TGG | + | chr2.3:36076023-36076042 | MS.gene067365:intron | 20.0% |
| !! | CCTATTTATAGAAGAATATT+GGG | + | chr2.3:36077484-36077503 | MS.gene067365:intron | 20.0% |
| !! | TAATGTAAAAAAGAACATGA+CGG | - | chr2.3:36076094-36076113 | None:intergenic | 20.0% |
| !! | TCCTATTTATAGAAGAATAT+TGG | + | chr2.3:36077483-36077502 | MS.gene067365:intron | 20.0% |
| !! | TTCAAAACAAATTACATCAA+AGG | - | chr2.3:36077763-36077782 | None:intergenic | 20.0% |
| !!! | TTTTTCTAACTCATAATCTT+GGG | - | chr2.3:36076173-36076192 | None:intergenic | 20.0% |
| ! | AAAAATACAAAAAAAGGCAG+CGG | - | chr2.3:36076485-36076504 | None:intergenic | 25.0% |
| ! | AAATATATGTCAATTCCATC+GGG | - | chr2.3:36077801-36077820 | None:intergenic | 25.0% |
| ! | CCCAATATTCTTCTATAAAT+AGG | - | chr2.3:36077487-36077506 | None:intergenic | 25.0% |
| ! | CCTAATTATAAGAGAAAGTT+GGG | - | chr2.3:36077569-36077588 | None:intergenic | 25.0% |
| ! | CTTTATCACTATGTATTTGT+TGG | - | chr2.3:36075296-36075315 | None:intergenic | 25.0% |
| ! | GTACTCAAAATTCTTGATAT+AGG | + | chr2.3:36075535-36075554 | MS.gene067365:intron | 25.0% |
| ! | TAAGTTTGAGAAAGATGATT+TGG | + | chr2.3:36076799-36076818 | MS.gene067365:CDS | 25.0% |
| ! | TATACAACATCCATCATATT+TGG | - | chr2.3:36077939-36077958 | None:intergenic | 25.0% |
| ! | TCAACAAAAGTTTATGTATC+TGG | - | chr2.3:36077546-36077565 | None:intergenic | 25.0% |
| ! | TCCTAATTATAAGAGAAAGT+TGG | - | chr2.3:36077570-36077589 | None:intergenic | 25.0% |
| ! | TGCTTTAATTATTTACCATC+CGG | + | chr2.3:36075707-36075726 | MS.gene067365:intron | 25.0% |
| !! | AGATTTTTCTGCTAAAACAT+TGG | + | chr2.3:36078013-36078032 | MS.gene067365:CDS | 25.0% |
| !! | GCTGATTATATGAATGTTTT+TGG | + | chr2.3:36077990-36078009 | MS.gene067365:CDS | 25.0% |
| !! | GTTTTTCTAACTCATAATCT+TGG | - | chr2.3:36076174-36076193 | None:intergenic | 25.0% |
| !! | TTATAAGATATCCTTTTTGC+AGG | + | chr2.3:36077093-36077112 | MS.gene067365:intron | 25.0% |
| !!! | AAAAAAAGGTGAGCTTTATT+AGG | + | chr2.3:36077274-36077293 | MS.gene067365:intron | 25.0% |
| !!! | ACATATATTTTGACAATGTC+GGG | + | chr2.3:36077811-36077830 | MS.gene067365:CDS | 25.0% |
| !!! | GACATATATTTTGACAATGT+CGG | + | chr2.3:36077810-36077829 | MS.gene067365:CDS | 25.0% |
| !!! | TAATAAAGCTCACCTTTTTT+TGG | - | chr2.3:36077275-36077294 | None:intergenic | 25.0% |
| AAACCATACTAGATAACCAA+TGG | - | chr2.3:36076671-36076690 | None:intergenic | 30.0% | |
| AAATATTGCACCCTAGAAAA+GGG | - | chr2.3:36076539-36076558 | None:intergenic | 30.0% | |
| ACTTATCATCTTGGAATTCT+TGG | + | chr2.3:36076908-36076927 | MS.gene067365:CDS | 30.0% | |
| ATAAGTGAGTGGAAATTCAA+AGG | - | chr2.3:36076894-36076913 | None:intergenic | 30.0% | |
| ATCTAAACTCCACTCTTAAA+AGG | + | chr2.3:36077430-36077449 | MS.gene067365:CDS | 30.0% | |
| ATTTCTGAGTATACTGATGT+TGG | + | chr2.3:36077900-36077919 | MS.gene067365:CDS | 30.0% | |
| CCCAACTTTCTCTTATAATT+AGG | + | chr2.3:36077566-36077585 | MS.gene067365:intron | 30.0% | |
| GAAATTTGCAAACCACAAAA+GGG | + | chr2.3:36077150-36077169 | MS.gene067365:CDS | 30.0% | |
| GAAGAAAAATGTCTAGTGAA+TGG | + | chr2.3:36076997-36077016 | MS.gene067365:intron | 30.0% | |
| TAAATATTGCACCCTAGAAA+AGG | - | chr2.3:36076540-36076559 | None:intergenic | 30.0% | |
| TGAAATTTGCAAACCACAAA+AGG | + | chr2.3:36077149-36077168 | MS.gene067365:CDS | 30.0% | |
| TTCATGCGGTTAATAAGATA+AGG | - | chr2.3:36075439-36075458 | None:intergenic | 30.0% | |
| TTGATATTACTGATGTGATG+TGG | + | chr2.3:36075761-36075780 | MS.gene067365:intron | 30.0% | |
| TTTAAGAGTGGAGTTTAGAT+CGG | - | chr2.3:36077430-36077449 | None:intergenic | 30.0% | |
| ! | GGACAATATGCAAAACTTTT+AGG | + | chr2.3:36077222-36077241 | MS.gene067365:CDS | 30.0% |
| !! | GAGAAAGATGATTTGGTTAT+GGG | + | chr2.3:36076806-36076825 | MS.gene067365:CDS | 30.0% |
| !! | TGAGAAAGATGATTTGGTTA+TGG | + | chr2.3:36076805-36076824 | MS.gene067365:CDS | 30.0% |
| !! | TTCTTCTTGTTGTCCTATTT+TGG | + | chr2.3:36076718-36076737 | MS.gene067365:intron | 30.0% |
| !!! | ACATTTTGAAGTCAAAACTG+AGG | + | chr2.3:36075345-36075364 | MS.gene067365:CDS | 30.0% |
| !!! | ATATATTTTGACAATGTCGG+GGG | + | chr2.3:36077813-36077832 | MS.gene067365:CDS | 30.0% |
| !!! | CATATATTTTGACAATGTCG+GGG | + | chr2.3:36077812-36077831 | MS.gene067365:CDS | 30.0% |
| !!! | GTCTCAGGTTTCATTTTTTT+CGG | + | chr2.3:36076403-36076422 | MS.gene067365:intron | 30.0% |
| AATCAAACACTATGGTCTAG+TGG | + | chr2.3:36076031-36076050 | MS.gene067365:intron | 35.0% | |
| ACATTACTCAAAGAAGAGCT+AGG | + | chr2.3:36077372-36077391 | MS.gene067365:CDS | 35.0% | |
| ACATTGGATTATCTTCGCAA+TGG | + | chr2.3:36078029-36078048 | MS.gene067365:CDS | 35.0% | |
| ACTTCAAAATGTGACTCCTT+TGG | - | chr2.3:36075337-36075356 | None:intergenic | 35.0% | |
| AGCAACCAATCAAAGTGAAA+TGG | + | chr2.3:36075264-36075283 | MS.gene067365:CDS | 35.0% | |
| AGCCAAAATCTTTGTACTCA+AGG | - | chr2.3:36077307-36077326 | None:intergenic | 35.0% | |
| ATTATCACTTCATCAGAACC+TGG | - | chr2.3:36075391-36075410 | None:intergenic | 35.0% | |
| ATTCCAAGATGATAAGTGAG+TGG | - | chr2.3:36076905-36076924 | None:intergenic | 35.0% | |
| CACTTCCATTTCACTTTGAT+TGG | - | chr2.3:36075272-36075291 | None:intergenic | 35.0% | |
| CTCTTATAATTAGGACCAGA+TGG | + | chr2.3:36077575-36077594 | MS.gene067365:intron | 35.0% | |
| CTTCAAAATGTGACTCCTTT+GGG | - | chr2.3:36075336-36075355 | None:intergenic | 35.0% | |
| CTTCTATAAATAGGACCAGA+GGG | - | chr2.3:36077478-36077497 | None:intergenic | 35.0% | |
| GCCAAAATCTTTGTACTCAA+GGG | - | chr2.3:36077306-36077325 | None:intergenic | 35.0% | |
| GCTATTGATGCTCTAGTTAT+TGG | + | chr2.3:36076752-36076771 | MS.gene067365:CDS | 35.0% | |
| GGATCAGTTGGAAATATTGT+AGG | + | chr2.3:36077201-36077220 | MS.gene067365:CDS | 35.0% | |
| GTGTCGAATATCTATGTATG+TGG | - | chr2.3:36077612-36077631 | None:intergenic | 35.0% | |
| TAATGGAGTTGCAAAGCTAA+TGG | - | chr2.3:36075485-36075504 | None:intergenic | 35.0% | |
| TACAAGAGAATCACTATCAG+AGG | + | chr2.3:36077957-36077976 | MS.gene067365:CDS | 35.0% | |
| TCTTCTATAAATAGGACCAG+AGG | - | chr2.3:36077479-36077498 | None:intergenic | 35.0% | |
| TTCAAAATGTGACTCCTTTG+GGG | - | chr2.3:36075335-36075354 | None:intergenic | 35.0% | |
| TTCTTCAACTTTATGACAGC+AGG | - | chr2.3:36076983-36077002 | None:intergenic | 35.0% | |
| TTGAAGTATGCTTCTCTTCA+AGG | + | chr2.3:36076381-36076400 | MS.gene067365:intron | 35.0% | |
| TTTCCACTCACTTATCATCT+TGG | + | chr2.3:36076899-36076918 | MS.gene067365:CDS | 35.0% | |
| ! | AAGACTTGAACCCTTTTCTA+GGG | + | chr2.3:36076526-36076545 | MS.gene067365:intron | 35.0% |
| ! | AATACCTTTTCACCCTTTTG+TGG | - | chr2.3:36077165-36077184 | None:intergenic | 35.0% |
| ! | ATCCTTTTTGCAGGATTTAG+TGG | + | chr2.3:36077102-36077121 | MS.gene067365:intron | 35.0% |
| ! | GGATCTTGAGTGATTTTGTT+GGG | - | chr2.3:36076647-36076666 | None:intergenic | 35.0% |
| ! | TTGAAGAGAAGCATACTTCA+AGG | - | chr2.3:36076382-36076401 | None:intergenic | 35.0% |
| ! | TTGATTGGTTGCTAACTCTT+TGG | - | chr2.3:36075257-36075276 | None:intergenic | 35.0% |
| !! | AATAATAATTGAGTTGGGGC+TGG | + | chr2.3:36076298-36076317 | MS.gene067365:intron | 35.0% |
| !! | GCTAACAAACCTTTTAAGAG+TGG | - | chr2.3:36077442-36077461 | None:intergenic | 35.0% |
| !! | GTTGCTAACATGAAAGCATT+TGG | + | chr2.3:36077855-36077874 | MS.gene067365:CDS | 35.0% |
| !! | TCTGGACTGATTTTTGAACT+AGG | - | chr2.3:36077528-36077547 | None:intergenic | 35.0% |
| !!! | CTTTTAGGTTGCTATGTTGT+TGG | + | chr2.3:36077237-36077256 | MS.gene067365:CDS | 35.0% |
| !!! | TTTTTTTCGGTGATTGAAGC+TGG | + | chr2.3:36076416-36076435 | MS.gene067365:intron | 35.0% |
| AAACCAACCTGTGAATTGGT+CGG | - | chr2.3:36075623-36075642 | None:intergenic | 40.0% | |
| AAGAGTCCAACAAATGCAGA+AGG | - | chr2.3:36078101-36078120 | None:intergenic | 40.0% | |
| AGAGTCCAACAAATGCAGAA+GGG | - | chr2.3:36078100-36078119 | None:intergenic | 40.0% | |
| ATTGGAAGAGTTGTGACTTC+TGG | + | chr2.3:36076770-36076789 | MS.gene067365:CDS | 40.0% | |
| CAAACCACAAAAGGGTGAAA+AGG | + | chr2.3:36077158-36077177 | MS.gene067365:CDS | 40.0% | |
| CCAAACAAATGATGAGTACC+TGG | - | chr2.3:36075516-36075535 | None:intergenic | 40.0% | |
| CCAGGTACTCATCATTTGTT+TGG | + | chr2.3:36075513-36075532 | MS.gene067365:intron | 40.0% | |
| CCATACTAGATAACCAATGG+CGG | - | chr2.3:36076668-36076687 | None:intergenic | 40.0% | |
| CTAGAAAAGGGTTCAAGTCT+TGG | - | chr2.3:36076527-36076546 | None:intergenic | 40.0% | |
| CTCTTCAATGGAGATAACGT+TGG | + | chr2.3:36078116-36078135 | MS.gene067365:CDS | 40.0% | |
| GAGAGCTTCACCAAATATGA+TGG | + | chr2.3:36077926-36077945 | MS.gene067365:CDS | 40.0% | |
| GATCAAACCAACCTGTGAAT+TGG | - | chr2.3:36075627-36075646 | None:intergenic | 40.0% | |
| GGTTTCTTCCTTGTAGTTGA+AGG | - | chr2.3:36077409-36077428 | None:intergenic | 40.0% | |
| GTATTTGTTTCAGCAGCATC+TGG | + | chr2.3:36077180-36077199 | MS.gene067365:CDS | 40.0% | |
| GTCCACTAAATCCTGCAAAA+AGG | - | chr2.3:36077107-36077126 | None:intergenic | 40.0% | |
| TTACCATCCGGTTCAATATC+CGG | + | chr2.3:36075719-36075738 | MS.gene067365:intron | 40.0% | |
| TTGGAAGAGTTGTGACTTCT+GGG | + | chr2.3:36076771-36076790 | MS.gene067365:CDS | 40.0% | |
| TTTGCAACTCCATTAACTCC+AGG | + | chr2.3:36075490-36075509 | MS.gene067365:CDS | 40.0% | |
| ! | CAAGACTTGAACCCTTTTCT+AGG | + | chr2.3:36076525-36076544 | MS.gene067365:intron | 40.0% |
| ! | CAGGTTGAATTAACTGCTGT+TGG | - | chr2.3:36075655-36075674 | None:intergenic | 40.0% |
| ! | CCAGAAAAGAGAGTGTAGTT+CGG | - | chr2.3:36076954-36076973 | None:intergenic | 40.0% |
| ! | CGGATCTTGAGTGATTTTGT+TGG | - | chr2.3:36076648-36076667 | None:intergenic | 40.0% |
| ! | GCATTTGTTGGACTCTTCAA+TGG | + | chr2.3:36078104-36078123 | MS.gene067365:CDS | 40.0% |
| ! | GCCCTTGAGTACAAAGATTT+TGG | + | chr2.3:36077302-36077321 | MS.gene067365:intron | 40.0% |
| ! | TAACTAGAGCATCAATAGCC+TGG | - | chr2.3:36076751-36076770 | None:intergenic | 40.0% |
| ! | TATTTCAGGTACTTTCCCGA+TGG | + | chr2.3:36077783-36077802 | MS.gene067365:intron | 40.0% |
| ! | TGATGATGCCTTCAACTACA+AGG | + | chr2.3:36077398-36077417 | MS.gene067365:CDS | 40.0% |
| ! | TTTAGTCTTTCGTTGAAGCC+AGG | + | chr2.3:36075370-36075389 | MS.gene067365:CDS | 40.0% |
| ! | TTTGGTAGAGTGTCTGTTTG+TGG | + | chr2.3:36077873-36077892 | MS.gene067365:CDS | 40.0% |
| !! | AGGTTCTAAGTTAACACCAC+CGG | - | chr2.3:36076362-36076381 | None:intergenic | 40.0% |
| !! | GGTTATGGGAGTATTCACTT+GGG | + | chr2.3:36076820-36076839 | MS.gene067365:CDS | 40.0% |
| !! | TGGTTATGGGAGTATTCACT+TGG | + | chr2.3:36076819-36076838 | MS.gene067365:CDS | 40.0% |
| !! | TTTAGTGGACTGTCAGCTTA+TGG | + | chr2.3:36077117-36077136 | MS.gene067365:CDS | 40.0% |
| !!! | TCCTATTTTGGCACTTTTCC+AGG | + | chr2.3:36076730-36076749 | MS.gene067365:intron | 40.0% |
| AATCACTCAAGATCCGCCAT+TGG | + | chr2.3:36076652-36076671 | MS.gene067365:intron | 45.0% | |
| AGCATCCCTTCTGCATTTGT+TGG | + | chr2.3:36078092-36078111 | MS.gene067365:CDS | 45.0% | |
| AGTTGCAGGTGATTGAAGAC+AGG | + | chr2.3:36078054-36078073 | MS.gene067365:CDS | 45.0% | |
| ATGCTTCTCTTCAAGGTCTC+AGG | + | chr2.3:36076388-36076407 | MS.gene067365:intron | 45.0% | |
| GGCTGAGTACAGTGTAGTTA+AGG | + | chr2.3:36076841-36076860 | MS.gene067365:CDS | 45.0% | |
| GTGATTGAAGACAGGTCGTT+GGG | + | chr2.3:36078062-36078081 | MS.gene067365:CDS | 45.0% | |
| GTGGTTCTTAGTACTCCATC+TGG | - | chr2.3:36077593-36077612 | None:intergenic | 45.0% | |
| TCAAGAACCGACCAATTCAC+AGG | + | chr2.3:36075613-36075632 | MS.gene067365:intron | 45.0% | |
| TCGCATTGAAGATTCCCCAA+AGG | + | chr2.3:36075318-36075337 | MS.gene067365:CDS | 45.0% | |
| ! | AGAACATGACGGAATCGACA+CGG | - | chr2.3:36076083-36076102 | None:intergenic | 45.0% |
| ! | CCGAACTACACTCTCTTTTC+TGG | + | chr2.3:36076951-36076970 | MS.gene067365:intron | 45.0% |
| ! | CCGCCATTGGTTATCTAGTA+TGG | + | chr2.3:36076665-36076684 | MS.gene067365:intron | 45.0% |
| !! | AAGCGCTGTAGCTTTTCATG+CGG | - | chr2.3:36075453-36075472 | None:intergenic | 45.0% |
| !! | GCCTGGAAAAGTGCCAAAAT+AGG | - | chr2.3:36076734-36076753 | None:intergenic | 45.0% |
| !! | GGTTCTAAGTTAACACCACC+GGG | - | chr2.3:36076361-36076380 | None:intergenic | 45.0% |
| !! | TTCACAGGTTGGTTTGATCG+TGG | + | chr2.3:36075628-36075647 | MS.gene067365:intron | 45.0% |
| !!! | TATATCATATATTTTTAATT+TGG | - | chr2.3:36076249-36076268 | None:intergenic | 5.0% |
| AACTCCATTAACTCCAGGCC+AGG | + | chr2.3:36075495-36075514 | MS.gene067365:CDS | 50.0% | |
| AGTACCTGGCCTGGAGTTAA+TGG | - | chr2.3:36075502-36075521 | None:intergenic | 50.0% | |
| CAAATGATGAGTACCTGGCC+TGG | - | chr2.3:36075511-36075530 | None:intergenic | 50.0% | |
| CTGTGCTGGGAGCCAAAAAA+AGG | + | chr2.3:36077260-36077279 | MS.gene067365:CDS | 50.0% | |
| GAACCGACCAATTCACAGGT+TGG | + | chr2.3:36075617-36075636 | MS.gene067365:intron | 50.0% | |
| GCGATGTCAAATACTCCCTC+TGG | + | chr2.3:36077460-36077479 | MS.gene067365:intron | 50.0% | |
| GGTGATTGAAGACAGGTCGT+TGG | + | chr2.3:36078061-36078080 | MS.gene067365:CDS | 50.0% | |
| TAAGTTAACACCACCGGGCA+GGG | - | chr2.3:36076356-36076375 | None:intergenic | 50.0% | |
| TCAGCAGCATCTGGATCAGT+TGG | + | chr2.3:36077189-36077208 | MS.gene067365:CDS | 50.0% | |
| TCTTCGCAATGGTCAGTTGC+AGG | + | chr2.3:36078040-36078059 | MS.gene067365:CDS | 50.0% | |
| ! | GCTATGTTGTTGGCTGTGCT+GGG | + | chr2.3:36077247-36077266 | MS.gene067365:CDS | 50.0% |
| ! | TGCTATGTTGTTGGCTGTGC+TGG | + | chr2.3:36077246-36077265 | MS.gene067365:CDS | 50.0% |
| !! | AGTGGACTGTCAGCTTATGG+AGG | + | chr2.3:36077120-36077139 | MS.gene067365:CDS | 50.0% |
| ACTATCTGCGTGCGATGGCA+TGG | - | chr2.3:36076448-36076467 | None:intergenic | 55.0% | |
| ATAGCCACACCCAGCCTTGA+AGG | + | chr2.3:36076323-36076342 | MS.gene067365:intron | 55.0% | |
| CCACCGGATATTGAACCGGA+TGG | - | chr2.3:36075725-36075744 | None:intergenic | 55.0% | |
| CCATCCGGTTCAATATCCGG+TGG | + | chr2.3:36075722-36075741 | MS.gene067365:intron | 55.0% | |
| CCTGCCACCGGATATTGAAC+CGG | - | chr2.3:36075729-36075748 | None:intergenic | 55.0% | |
| CGGTTCAATATCCGGTGGCA+GGG | + | chr2.3:36075727-36075746 | MS.gene067365:intron | 55.0% | |
| CTAAGTTAACACCACCGGGC+AGG | - | chr2.3:36076357-36076376 | None:intergenic | 55.0% | |
| GGTTCAATATCCGGTGGCAG+GGG | + | chr2.3:36075728-36075747 | MS.gene067365:intron | 55.0% | |
| TAGCCACACCCAGCCTTGAA+GGG | + | chr2.3:36076324-36076343 | MS.gene067365:intron | 55.0% | |
| TGCAGACTATCTGCGTGCGA+TGG | - | chr2.3:36076453-36076472 | None:intergenic | 55.0% | |
| CCGGTTCAATATCCGGTGGC+AGG | + | chr2.3:36075726-36075745 | MS.gene067365:intron | 60.0% | |
| GATCCCTTCAAGGCTGGGTG+TGG | - | chr2.3:36076330-36076349 | None:intergenic | 60.0% | |
| GGACGGATCCCTTCAAGGCT+GGG | - | chr2.3:36076335-36076354 | None:intergenic | 60.0% | |
| TCAATATCCGGTGGCAGGGG+CGG | + | chr2.3:36075731-36075750 | MS.gene067365:intron | 60.0% | |
| TTAACACCACCGGGCAGGGA+CGG | - | chr2.3:36076352-36076371 | None:intergenic | 60.0% | |
| GGCAGGGACGGATCCCTTCA+AGG | - | chr2.3:36076340-36076359 | None:intergenic | 65.0% | |
| GGGACGGATCCCTTCAAGGC+TGG | - | chr2.3:36076336-36076355 | None:intergenic | 65.0% | |
| TGAAGGGATCCGTCCCTGCC+CGG | + | chr2.3:36076340-36076359 | MS.gene067365:intron | 65.0% | |
| AGGGATCCGTCCCTGCCCGG+TGG | + | chr2.3:36076343-36076362 | MS.gene067365:intron | 75.0% | |
| CCCAGATCCGCCCCTGCCAC+CGG | - | chr2.3:36075741-36075760 | None:intergenic | 75.0% | |
| CCGGTGGCAGGGGCGGATCT+GGG | + | chr2.3:36075738-36075757 | MS.gene067365:intron | 75.0% | |
| TCCGGTGGCAGGGGCGGATC+TGG | + | chr2.3:36075737-36075756 | MS.gene067365:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 36075248 | 36078169 | 36075248 | ID=MS.gene067365 |
| chr2.3 | mRNA | 36075248 | 36078169 | 36075248 | ID=MS.gene067365.t1;Parent=MS.gene067365 |
| chr2.3 | exon | 36075248 | 36075516 | 36075248 | ID=MS.gene067365.t1.exon1;Parent=MS.gene067365.t1 |
| chr2.3 | CDS | 36075248 | 36075516 | 36075248 | ID=cds.MS.gene067365.t1;Parent=MS.gene067365.t1 |
| chr2.3 | exon | 36076752 | 36076929 | 36076752 | ID=MS.gene067365.t1.exon2;Parent=MS.gene067365.t1 |
| chr2.3 | CDS | 36076752 | 36076929 | 36076752 | ID=cds.MS.gene067365.t1;Parent=MS.gene067365.t1 |
| chr2.3 | exon | 36077115 | 36077281 | 36077115 | ID=MS.gene067365.t1.exon3;Parent=MS.gene067365.t1 |
| chr2.3 | CDS | 36077115 | 36077281 | 36077115 | ID=cds.MS.gene067365.t1;Parent=MS.gene067365.t1 |
| chr2.3 | exon | 36077369 | 36077451 | 36077369 | ID=MS.gene067365.t1.exon4;Parent=MS.gene067365.t1 |
| chr2.3 | CDS | 36077369 | 36077451 | 36077369 | ID=cds.MS.gene067365.t1;Parent=MS.gene067365.t1 |
| chr2.3 | exon | 36077791 | 36078169 | 36077791 | ID=MS.gene067365.t1.exon5;Parent=MS.gene067365.t1 |
| chr2.3 | CDS | 36077791 | 36078169 | 36077791 | ID=cds.MS.gene067365.t1;Parent=MS.gene067365.t1 |
| Gene Sequence |
| Protein sequence |
