Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067369.t1 | XP_024641908.1 | 99.4 | 315 | 2 | 0 | 1 | 315 | 1 | 315 | 2.10E-173 | 618.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067369.t1 | Q9C9X3 | 53.9 | 317 | 141 | 2 | 1 | 314 | 1 | 315 | 2.2e-91 | 337.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067369.t1 | A0A072ULQ2 | 99.4 | 315 | 2 | 0 | 1 | 315 | 1 | 315 | 1.5e-173 | 618.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28077 | MS.gene067369 | PPI |
| MS.gene010215 | MS.gene067369 | PPI |
| MS.gene067369 | MS.gene043964 | PPI |
| MS.gene00058 | MS.gene067369 | PPI |
| MS.gene92405 | MS.gene067369 | PPI |
| MS.gene035891 | MS.gene067369 | PPI |
| MS.gene058336 | MS.gene067369 | PPI |
| MS.gene57291 | MS.gene067369 | PPI |
| MS.gene45772 | MS.gene067369 | PPI |
| MS.gene67887 | MS.gene067369 | PPI |
| MS.gene061777 | MS.gene067369 | PPI |
| MS.gene030809 | MS.gene067369 | PPI |
| MS.gene056195 | MS.gene067369 | PPI |
| MS.gene89484 | MS.gene067369 | PPI |
| MS.gene55897 | MS.gene067369 | PPI |
| MS.gene016642 | MS.gene067369 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067369.t1 | MTR_6g071595 | 99.365 | 315 | 2 | 0 | 1 | 315 | 1 | 315 | 0.0 | 648 |
| MS.gene067369.t1 | MTR_1g112520 | 88.254 | 315 | 37 | 0 | 1 | 315 | 1 | 315 | 0.0 | 565 |
| MS.gene067369.t1 | MTR_6g071615 | 87.937 | 315 | 38 | 0 | 1 | 315 | 1 | 315 | 0.0 | 561 |
| MS.gene067369.t1 | MTR_6g071605 | 83.492 | 315 | 52 | 0 | 1 | 315 | 1 | 315 | 0.0 | 555 |
| MS.gene067369.t1 | MTR_8g107640 | 77.389 | 314 | 71 | 0 | 1 | 314 | 1 | 314 | 0.0 | 521 |
| MS.gene067369.t1 | MTR_6g071595 | 99.200 | 250 | 2 | 0 | 1 | 250 | 1 | 250 | 0.0 | 513 |
| MS.gene067369.t1 | MTR_1g033560 | 59.748 | 318 | 122 | 3 | 1 | 315 | 1 | 315 | 2.76e-136 | 389 |
| MS.gene067369.t1 | MTR_8g038150 | 38.486 | 317 | 188 | 3 | 1 | 312 | 1 | 315 | 5.06e-70 | 220 |
| MS.gene067369.t1 | MTR_8g038180 | 37.025 | 316 | 196 | 3 | 1 | 315 | 1 | 314 | 8.99e-67 | 212 |
| MS.gene067369.t1 | MTR_8g038220 | 36.943 | 314 | 193 | 4 | 1 | 312 | 1 | 311 | 1.10e-63 | 204 |
| MS.gene067369.t1 | MTR_3g018780 | 35.556 | 315 | 200 | 3 | 1 | 314 | 1 | 313 | 1.80e-63 | 203 |
| MS.gene067369.t1 | MTR_8g038220 | 36.306 | 314 | 194 | 4 | 1 | 312 | 1 | 310 | 4.06e-63 | 202 |
| MS.gene067369.t1 | MTR_3g018790 | 37.380 | 313 | 193 | 3 | 1 | 312 | 1 | 311 | 4.96e-63 | 202 |
| MS.gene067369.t1 | MTR_5g063670 | 35.423 | 319 | 196 | 5 | 1 | 314 | 1 | 314 | 1.36e-61 | 199 |
| MS.gene067369.t1 | MTR_8g038210 | 35.577 | 312 | 199 | 2 | 1 | 312 | 1 | 310 | 1.19e-59 | 193 |
| MS.gene067369.t1 | MTR_0276s0050 | 35.350 | 314 | 199 | 3 | 1 | 312 | 1 | 312 | 6.26e-59 | 192 |
| MS.gene067369.t1 | MTR_2g031980 | 34.824 | 313 | 201 | 3 | 1 | 312 | 1 | 311 | 1.22e-58 | 191 |
| MS.gene067369.t1 | MTR_8g038210 | 34.615 | 312 | 202 | 2 | 1 | 312 | 1 | 310 | 6.78e-58 | 189 |
| MS.gene067369.t1 | MTR_6g028030 | 34.050 | 279 | 166 | 7 | 45 | 310 | 34 | 307 | 1.15e-39 | 142 |
| MS.gene067369.t1 | MTR_3g018790 | 32.365 | 241 | 161 | 2 | 74 | 313 | 19 | 258 | 4.63e-37 | 133 |
| MS.gene067369.t1 | MTR_8g038170 | 28.664 | 307 | 196 | 5 | 22 | 312 | 12 | 311 | 4.30e-35 | 129 |
| MS.gene067369.t1 | MTR_8g038170 | 28.664 | 307 | 196 | 5 | 22 | 312 | 12 | 311 | 4.30e-35 | 129 |
| MS.gene067369.t1 | MTR_3g018920 | 32.547 | 212 | 110 | 3 | 1 | 212 | 1 | 179 | 4.71e-27 | 104 |
| MS.gene067369.t1 | MTR_3g018925 | 42.391 | 92 | 53 | 0 | 222 | 313 | 16 | 107 | 7.91e-16 | 72.8 |
| MS.gene067369.t1 | MTR_8g038090 | 46.377 | 69 | 36 | 1 | 245 | 312 | 22 | 90 | 4.69e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067369.t1 | AT1G68090 | 53.943 | 317 | 141 | 2 | 1 | 314 | 1 | 315 | 3.15e-123 | 356 |
| MS.gene067369.t1 | AT1G68090 | 51.190 | 252 | 118 | 2 | 1 | 249 | 1 | 250 | 4.02e-88 | 264 |
| MS.gene067369.t1 | AT1G68090 | 25.352 | 213 | 138 | 5 | 108 | 311 | 37 | 237 | 6.01e-13 | 68.2 |
| MS.gene067369.t1 | AT5G10230 | 38.924 | 316 | 191 | 2 | 1 | 315 | 1 | 315 | 6.19e-76 | 235 |
| MS.gene067369.t1 | AT5G10220 | 38.365 | 318 | 192 | 3 | 1 | 315 | 1 | 317 | 1.54e-74 | 232 |
| MS.gene067369.t1 | AT5G65020 | 39.683 | 315 | 185 | 4 | 1 | 312 | 1 | 313 | 3.39e-74 | 231 |
| MS.gene067369.t1 | AT1G35720 | 37.304 | 319 | 191 | 4 | 1 | 314 | 1 | 315 | 5.16e-65 | 207 |
| MS.gene067369.t1 | AT5G65020 | 38.621 | 290 | 173 | 4 | 26 | 312 | 11 | 298 | 5.75e-64 | 204 |
| MS.gene067369.t1 | AT5G12380 | 35.016 | 317 | 195 | 5 | 1 | 312 | 1 | 311 | 9.14e-61 | 196 |
| MS.gene067369.t1 | AT2G38760 | 33.438 | 320 | 203 | 5 | 1 | 312 | 1 | 318 | 9.19e-53 | 176 |
| MS.gene067369.t1 | AT2G38750 | 30.323 | 310 | 185 | 9 | 26 | 314 | 2 | 301 | 1.83e-32 | 122 |
| MS.gene067369.t1 | AT2G38750 | 30.323 | 310 | 185 | 9 | 26 | 314 | 19 | 318 | 2.19e-32 | 122 |
Find 0 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTACTAATTTACTTATATAA+CGG | + | 41637:9431-9450 | MS.gene067369:intron | 15.0% |
| !! | GTCAATATTCATAAATAATA+AGG | - | 41637:8017-8036 | MS.gene067369:intergenic | 15.0% |
| !! | TAGAATTGATTATAAATTGA+AGG | + | 41637:8150-8169 | MS.gene067369:intron | 15.0% |
| !! | TATTAGAACTGTTTAAAAAA+TGG | + | 41637:10305-10324 | MS.gene067369:intron | 15.0% |
| !!! | TTTCAAGTTAAATTAATATC+AGG | + | 41637:10751-10770 | MS.gene067369:intron | 15.0% |
| !!! | TTTTTAACACTCAAATATAT+TGG | + | 41637:8338-8357 | MS.gene067369:intron | 15.0% |
| !! | AAAAAAAAAACCAATTCTAC+AGG | - | 41637:8519-8538 | MS.gene067369:intergenic | 20.0% |
| !! | AAGTTATTAGGAGAAAAATA+TGG | - | 41637:7959-7978 | MS.gene067369:intergenic | 20.0% |
| !! | ATAAATGAAGTTGAATTGAT+AGG | - | 41637:10715-10734 | MS.gene067369:intergenic | 20.0% |
| !! | TAGAATTAGAATGGAAAAAA+TGG | - | 41637:9254-9273 | MS.gene067369:intergenic | 20.0% |
| !!! | AATTCTAAAACTATGCATAA+TGG | - | 41637:8707-8726 | MS.gene067369:intergenic | 20.0% |
| !!! | ATAATCAATTTTACACATCT+AGG | - | 41637:8090-8109 | MS.gene067369:intergenic | 20.0% |
| !!! | CCAATTTTATGAAAATAGTT+AGG | - | 41637:8739-8758 | MS.gene067369:intergenic | 20.0% |
| !!! | CCTAACTATTTTCATAAAAT+TGG | + | 41637:8736-8755 | MS.gene067369:intron | 20.0% |
| !!! | GTTTCAATTTTGTAATGATT+TGG | - | 41637:8993-9012 | MS.gene067369:intergenic | 20.0% |
| !!! | TGATTATGTAAAATTGATTC+TGG | - | 41637:8426-8445 | MS.gene067369:intergenic | 20.0% |
| !!! | TTTTTATCAACACTGTTTAA+AGG | - | 41637:8672-8691 | MS.gene067369:intergenic | 20.0% |
| ! | AACATCATGCTCAATATAAA+CGG | - | 41637:9860-9879 | MS.gene067369:intergenic | 25.0% |
| ! | ACTGATATGTTACATTAGTT+TGG | + | 41637:10050-10069 | MS.gene067369:intron | 25.0% |
| ! | AGATAATAAAATGTGATGCA+TGG | + | 41637:9103-9122 | MS.gene067369:intron | 25.0% |
| ! | ATAATGCTTTGTATTCTTGT+TGG | - | 41637:9358-9377 | MS.gene067369:intergenic | 25.0% |
| ! | ATCACAAATTAGTCACATTA+AGG | + | 41637:9975-9994 | MS.gene067369:intron | 25.0% |
| ! | ATTGAAGGAAGAATTATGTT+TGG | + | 41637:8165-8184 | MS.gene067369:intron | 25.0% |
| ! | CTTTCAATTCAATGTTATGT+TGG | - | 41637:9485-9504 | MS.gene067369:intergenic | 25.0% |
| ! | GTAAAACGATAGAATTAGAA+TGG | - | 41637:9263-9282 | MS.gene067369:intergenic | 25.0% |
| ! | TAGGAAAAATACTTCCTTTA+GGG | + | 41637:10891-10910 | MS.gene067369:intron | 25.0% |
| ! | TGTAACATATCAGTTCTATT+TGG | - | 41637:10044-10063 | MS.gene067369:intergenic | 25.0% |
| ! | TTAGGAAAAATACTTCCTTT+AGG | + | 41637:10890-10909 | MS.gene067369:intron | 25.0% |
| !! | AACAGTTCTAATATTTGAGT+TGG | - | 41637:10298-10317 | MS.gene067369:intergenic | 25.0% |
| !! | ATAATTGATTCTGACATCTT+TGG | + | 41637:8226-8245 | MS.gene067369:intron | 25.0% |
| !! | ATACAAAGCATTATATTCTG+AGG | + | 41637:9364-9383 | MS.gene067369:CDS | 25.0% |
| !! | CACAGATAGTATAATTTTCT+CGG | + | 41637:9021-9040 | MS.gene067369:intron | 25.0% |
| !! | GTCAGTTAATAATAGCATTT+TGG | - | 41637:10241-10260 | MS.gene067369:intergenic | 25.0% |
| !! | TACATCTCTAGATTCAATTT+TGG | - | 41637:8207-8226 | MS.gene067369:intergenic | 25.0% |
| !! | TTCTAATTCTATCGTTTTAC+AGG | + | 41637:9263-9282 | MS.gene067369:intron | 25.0% |
| !! | TTGTAAATGTAGTTTTCGTT+TGG | - | 41637:10163-10182 | MS.gene067369:intergenic | 25.0% |
| !!! | AAAGTTGATTTTGAACGAAT+TGG | - | 41637:8627-8646 | MS.gene067369:intergenic | 25.0% |
| !!! | AACTTGTTTTAGTGTATGTT+TGG | + | 41637:8061-8080 | MS.gene067369:intron | 25.0% |
| !!! | ACTGTTTTAGATATTGTAGT+TGG | - | 41637:9744-9763 | MS.gene067369:intergenic | 25.0% |
| !!! | CAGTTTTGTTAGATTATGTT+TGG | - | 41637:8919-8938 | MS.gene067369:intergenic | 25.0% |
| !!! | CTGTTTTAGATATTGTAGTT+GGG | - | 41637:9743-9762 | MS.gene067369:intergenic | 25.0% |
| !!! | TTCTAATATTTGAGTTGGAT+CGG | - | 41637:10293-10312 | MS.gene067369:intergenic | 25.0% |
| AAAACCAAACACACATGAAT+TGG | + | 41637:8476-8495 | MS.gene067369:intron | 30.0% | |
| AAAATTGGATTGTAGAGTGT+GGG | + | 41637:8751-8770 | MS.gene067369:intron | 30.0% | |
| AAATCGAATTAAACACTTCC+GGG | + | 41637:9800-9819 | MS.gene067369:CDS | 30.0% | |
| AACAACGGTTATAAAGTAAG+GGG | - | 41637:8961-8980 | MS.gene067369:intergenic | 30.0% | |
| AAGTAGAATCTCTATTCTTG+AGG | - | 41637:8277-8296 | MS.gene067369:intergenic | 30.0% | |
| AAGTTACTGAACACTAACTA+CGG | - | 41637:8046-8065 | MS.gene067369:intergenic | 30.0% | |
| AATGAACATTCCTAAAAGGA+GGG | - | 41637:10002-10021 | MS.gene067369:intergenic | 30.0% | |
| AGAGTTTATCATAGACTATC+GGG | - | 41637:8871-8890 | MS.gene067369:intergenic | 30.0% | |
| AGGAAAAATACTTCCTTTAG+GGG | + | 41637:10892-10911 | MS.gene067369:intron | 30.0% | |
| ATAAGGCAATGAAAGGTTTA+GGG | + | 41637:11127-11146 | MS.gene067369:CDS | 30.0% | |
| ATTTGGATATAGCTGAACAA+CGG | - | 41637:8976-8995 | MS.gene067369:intergenic | 30.0% | |
| CAGAGTTTATCATAGACTAT+CGG | - | 41637:8872-8891 | MS.gene067369:intergenic | 30.0% | |
| CAGTTATACCATTCAAAGTT+TGG | + | 41637:9760-9779 | MS.gene067369:CDS | 30.0% | |
| GAAAAGCTAAGACGTTTAAA+AGG | - | 41637:11058-11077 | MS.gene067369:intergenic | 30.0% | |
| GAAATCGAATTAAACACTTC+CGG | + | 41637:9799-9818 | MS.gene067369:CDS | 30.0% | |
| GAACAACGGTTATAAAGTAA+GGG | - | 41637:8962-8981 | MS.gene067369:intergenic | 30.0% | |
| GAACAATGAACATTCCTAAA+AGG | - | 41637:10006-10025 | MS.gene067369:intergenic | 30.0% | |
| GAGACGAAACATAAACAATT+CGG | - | 41637:10086-10105 | MS.gene067369:intergenic | 30.0% | |
| GCTATTATTAACTGACAAGT+AGG | + | 41637:10245-10264 | MS.gene067369:intron | 30.0% | |
| GTCTAATGATATTCCATTCA+TGG | + | 41637:9226-9245 | MS.gene067369:intron | 30.0% | |
| TAAAATTGGATTGTAGAGTG+TGG | + | 41637:8750-8769 | MS.gene067369:intron | 30.0% | |
| TAATAGAGAAATTGCACAGA+AGG | + | 41637:10524-10543 | MS.gene067369:CDS | 30.0% | |
| TAATGATAGCACACTCATAA+GGG | + | 41637:11152-11171 | MS.gene067369:CDS | 30.0% | |
| TATAAGGCAATGAAAGGTTT+AGG | + | 41637:11126-11145 | MS.gene067369:CDS | 30.0% | |
| TCGTATTATCATGACATGTA+TGG | + | 41637:10654-10673 | MS.gene067369:CDS | 30.0% | |
| TGAACAACGGTTATAAAGTA+AGG | - | 41637:8963-8982 | MS.gene067369:intergenic | 30.0% | |
| TGAATAATGGTTAGAAGCAA+GGG | - | 41637:8781-8800 | MS.gene067369:intergenic | 30.0% | |
| TGATTCTATGTGAACAAAAC+TGG | + | 41637:10214-10233 | MS.gene067369:intron | 30.0% | |
| TTCATCTTCACTTCAACTTT+AGG | + | 41637:10872-10891 | MS.gene067369:intron | 30.0% | |
| TTGAATAATGGTTAGAAGCA+AGG | - | 41637:8782-8801 | MS.gene067369:intergenic | 30.0% | |
| TTGAATATAACCACATTTGC+CGG | - | 41637:10946-10965 | MS.gene067369:intergenic | 30.0% | |
| TTGTCCAAATATTCAGTGAA+CGG | + | 41637:10604-10623 | MS.gene067369:CDS | 30.0% | |
| TTTAGATATTGTAGTTGGGA+TGG | - | 41637:9739-9758 | MS.gene067369:intergenic | 30.0% | |
| ! | AAACTATGCATAATGGAAGA+AGG | - | 41637:8700-8719 | MS.gene067369:intergenic | 30.0% |
| ! | AATGTAGTTTTCGTTTGGTT+CGG | - | 41637:10158-10177 | MS.gene067369:intergenic | 30.0% |
| ! | ATATGGTACCTTTAAAAGCA+CGG | - | 41637:7942-7961 | MS.gene067369:intergenic | 30.0% |
| ! | GTAAGAGTGTAAAACTTGAA+TGG | + | 41637:9064-9083 | MS.gene067369:intron | 30.0% |
| ! | TCTATCGTTTTACAGGATTT+GGG | + | 41637:9270-9289 | MS.gene067369:intron | 30.0% |
| ! | TGTTCTTATGTGTGGATTTT+AGG | + | 41637:9930-9949 | MS.gene067369:intron | 30.0% |
| ! | TTCTATCGTTTTACAGGATT+TGG | + | 41637:9269-9288 | MS.gene067369:intron | 30.0% |
| !! | ATTTTAATGATCCCTCCTAT+CGG | - | 41637:9893-9912 | MS.gene067369:intergenic | 30.0% |
| !!! | GACAAGTTTTTTACACAAAG+CGG | - | 41637:10454-10473 | MS.gene067369:intergenic | 30.0% |
| AAAACCAGAAGCAAACTGAA+CGG | - | 41637:10374-10393 | MS.gene067369:intergenic | 35.0% | |
| AACTTGTCAAGATCTTGCTT+AGG | + | 41637:10466-10485 | MS.gene067369:intron | 35.0% | |
| AAGGGAAAGCGATTTATGTT+TGG | - | 41637:8389-8408 | MS.gene067369:intergenic | 35.0% | |
| AATCGAATTAAACACTTCCG+GGG | + | 41637:9801-9820 | MS.gene067369:CDS | 35.0% | |
| AATTCTACAGGCAAAAACTC+CGG | - | 41637:8507-8526 | MS.gene067369:intergenic | 35.0% | |
| ACCTTTGCAAAATACTTTGC+TGG | - | 41637:10845-10864 | MS.gene067369:intergenic | 35.0% | |
| AGAACCAATTCATGTGTGTT+TGG | - | 41637:8483-8502 | MS.gene067369:intergenic | 35.0% | |
| AGTACGCGAACATATTACTT+CGG | - | 41637:9716-9735 | MS.gene067369:intergenic | 35.0% | |
| ATGCTTTGTATTCTTGTTGG+AGG | - | 41637:9355-9374 | MS.gene067369:intergenic | 35.0% | |
| ATGTTGAATGAAATCCCGAT+AGG | + | 41637:9875-9894 | MS.gene067369:intron | 35.0% | |
| CAACTCTGATACGTAAACAT+TGG | - | 41637:10994-11013 | MS.gene067369:intergenic | 35.0% | |
| CAATGAACATTCCTAAAAGG+AGG | - | 41637:10003-10022 | MS.gene067369:intergenic | 35.0% | |
| CAATTTCTCTATTAACCTCG+AGG | - | 41637:10518-10537 | MS.gene067369:intergenic | 35.0% | |
| CATCATCAGCACAAGTTATT+AGG | - | 41637:7971-7990 | MS.gene067369:intergenic | 35.0% | |
| CTAATGATAGCACACTCATA+AGG | + | 41637:11151-11170 | MS.gene067369:CDS | 35.0% | |
| GAATGTTCATTGTTCGATTC+AGG | + | 41637:10011-10030 | MS.gene067369:intron | 35.0% | |
| GAGTTTATCATAGACTATCG+GGG | - | 41637:8870-8889 | MS.gene067369:intergenic | 35.0% | |
| GATAAACGCCAAACTTTGAA+TGG | - | 41637:9771-9790 | MS.gene067369:intergenic | 35.0% | |
| GCTATCGAAACGCTTAATTT+CGG | + | 41637:9388-9407 | MS.gene067369:CDS | 35.0% | |
| GGAAAAAATGGTTCCATGAA+TGG | - | 41637:9242-9261 | MS.gene067369:intergenic | 35.0% | |
| GTCATGATAATACGAACTGA+CGG | - | 41637:10649-10668 | MS.gene067369:intergenic | 35.0% | |
| GTGTCAGTGTTTCATAGATT+AGG | + | 41637:11020-11039 | MS.gene067369:intron | 35.0% | |
| GTGTTGTATAAGGCAATGAA+AGG | + | 41637:11120-11139 | MS.gene067369:CDS | 35.0% | |
| TCATAAGGGTCATTGTAACA+AGG | + | 41637:11166-11185 | MS.gene067369:CDS | 35.0% | |
| TTTGTATTCTTGTTGGAGGT+AGG | - | 41637:9351-9370 | MS.gene067369:intergenic | 35.0% | |
| ! | ATGTTTGGTTTCACTTCTAG+AGG | + | 41637:8180-8199 | MS.gene067369:intron | 35.0% |
| ! | CAACTTTACCGTGCTTTTAA+AGG | + | 41637:7931-7950 | MS.gene067369:CDS | 35.0% |
| ! | GAGTAAGGTGAGTTGAATAA+TGG | - | 41637:8794-8813 | MS.gene067369:intergenic | 35.0% |
| ! | GATTTTCTTCTCGCACTTTT+GGG | + | 41637:11288-11307 | MS.gene067369:CDS | 35.0% |
| ! | TAAGTGACGCTTTAGATATC+CGG | - | 41637:8827-8846 | MS.gene067369:intergenic | 35.0% |
| ! | TGTTTGGTTTCACTTCTAGA+GGG | + | 41637:8181-8200 | MS.gene067369:intron | 35.0% |
| ! | TTTGACTAAAACCGAGTTGA+AGG | - | 41637:8603-8622 | MS.gene067369:intergenic | 35.0% |
| ! | TTTTAATGATCCCTCCTATC+GGG | - | 41637:9892-9911 | MS.gene067369:intergenic | 35.0% |
| !! | AAAACTGACTTGAGATGTGA+GGG | + | 41637:8932-8951 | MS.gene067369:intron | 35.0% |
| !! | TCCAGCAAAGTATTTTGCAA+AGG | + | 41637:10841-10860 | MS.gene067369:CDS | 35.0% |
| !! | TCTCTTGTTGTTCTTATGTG+TGG | + | 41637:9922-9941 | MS.gene067369:intron | 35.0% |
| !!! | ATTTGAGTTGGATCGGTTTT+TGG | - | 41637:10286-10305 | MS.gene067369:intergenic | 35.0% |
| AAGTCAGTTTGCCTTCAACT+CGG | + | 41637:8589-8608 | MS.gene067369:intron | 40.0% | |
| AATTGCACAGAAGGATGCAA+AGG | + | 41637:10533-10552 | MS.gene067369:CDS | 40.0% | |
| ACCTAACCTTTATACCAGTC+TGG | - | 41637:10112-10131 | MS.gene067369:intergenic | 40.0% | |
| ATCAGACTGCAGTTCTACTT+TGG | + | 41637:9614-9633 | MS.gene067369:intron | 40.0% | |
| CACGTGATGCAGAAATCATT+AGG | + | 41637:9653-9672 | MS.gene067369:CDS | 40.0% | |
| CTCAATCCAGACTGGTATAA+AGG | + | 41637:10103-10122 | MS.gene067369:intron | 40.0% | |
| CTGGCTAAAAGTGAGTTCAA+GGG | - | 41637:8407-8426 | MS.gene067369:intergenic | 40.0% | |
| GGAGCTGAAAGGAAAATTAG+AGG | + | 41637:9409-9428 | MS.gene067369:CDS | 40.0% | |
| GGCAGTAAAGAATGAAGCAT+CGG | + | 41637:10772-10791 | MS.gene067369:intron | 40.0% | |
| GTATGGTCACTCATTGAAGA+AGG | + | 41637:10671-10690 | MS.gene067369:CDS | 40.0% | |
| GTTAATTGTCAGTCAGCGTT+CGG | + | 41637:10336-10355 | MS.gene067369:intron | 40.0% | |
| GTTCATTGTTCGATTCAGGA+AGG | + | 41637:10015-10034 | MS.gene067369:intron | 40.0% | |
| TCCAGACTGGTATAAAGGTT+AGG | + | 41637:10108-10127 | MS.gene067369:intron | 40.0% | |
| TCTGGCTAAAAGTGAGTTCA+AGG | - | 41637:8408-8427 | MS.gene067369:intergenic | 40.0% | |
| TGAAACATCAGGCAACTACA+GGG | + | 41637:11266-11285 | MS.gene067369:CDS | 40.0% | |
| TGAATGAAATCCCGATAGGA+GGG | + | 41637:9879-9898 | MS.gene067369:intron | 40.0% | |
| TGCAAAGGTTCTGTACAAAG+CGG | + | 41637:10548-10567 | MS.gene067369:CDS | 40.0% | |
| TGCTCCGTTCACTGAATATT+TGG | - | 41637:10611-10630 | MS.gene067369:intergenic | 40.0% | |
| TTGAATGAAATCCCGATAGG+AGG | + | 41637:9878-9897 | MS.gene067369:intron | 40.0% | |
| ! | AAAAGCACGGTAAAGTTGCA+TGG | - | 41637:7929-7948 | MS.gene067369:intergenic | 40.0% |
| ! | ACATTAAGGACCCTCCTTTT+AGG | + | 41637:9989-10008 | MS.gene067369:intron | 40.0% |
| ! | CACACATGAATTGGTTCTTC+CGG | + | 41637:8485-8504 | MS.gene067369:intron | 40.0% |
| ! | GCAGTAAAGAATGAAGCATC+GGG | + | 41637:10773-10792 | MS.gene067369:CDS | 40.0% |
| ! | GGAGTTTTTGCCTGTAGAAT+TGG | + | 41637:8506-8525 | MS.gene067369:intron | 40.0% |
| ! | GGATATCTAAAGCGTCACTT+AGG | + | 41637:8826-8845 | MS.gene067369:intron | 40.0% |
| ! | GGATTTTCTTCTCGCACTTT+TGG | + | 41637:11287-11306 | MS.gene067369:CDS | 40.0% |
| ! | TTGCAGCTCCTTTGATGATA+GGG | - | 41637:10417-10436 | MS.gene067369:intergenic | 40.0% |
| ! | TTTTCTCGGAAAATGTGCGT+TGG | + | 41637:9035-9054 | MS.gene067369:intron | 40.0% |
| !! | AATGAAGCATCGGGGAATTT+CGG | + | 41637:10782-10801 | MS.gene067369:CDS | 40.0% |
| !! | CAAAACTGACTTGAGATGTG+AGG | + | 41637:8931-8950 | MS.gene067369:intron | 40.0% |
| !! | CAGTAAAGAATGAAGCATCG+GGG | + | 41637:10774-10793 | MS.gene067369:CDS | 40.0% |
| AAAGGTTCTGTACAAAGCGG+GGG | + | 41637:10551-10570 | MS.gene067369:CDS | 45.0% | |
| ACGCGAACATATTACTTCGG+TGG | - | 41637:9713-9732 | MS.gene067369:intergenic | 45.0% | |
| CAAAGGTTCTGTACAAAGCG+GGG | + | 41637:10550-10569 | MS.gene067369:CDS | 45.0% | |
| CATTAGGAAGTCGCTAGTTG+TGG | + | 41637:9669-9688 | MS.gene067369:CDS | 45.0% | |
| CGCTTAATTTCGGAGCTGAA+AGG | + | 41637:9398-9417 | MS.gene067369:CDS | 45.0% | |
| CTGAAACATCAGGCAACTAC+AGG | + | 41637:11265-11284 | MS.gene067369:CDS | 45.0% | |
| CTTATACAACACCTGCATCG+AGG | - | 41637:11112-11131 | MS.gene067369:intergenic | 45.0% | |
| GCAAAGGTTCTGTACAAAGC+GGG | + | 41637:10549-10568 | MS.gene067369:CDS | 45.0% | |
| GTTCAACCCCCTATCATCAA+AGG | + | 41637:10406-10425 | MS.gene067369:intron | 45.0% | |
| TCCAATTCCTCCTTCTCCTA+GGG | + | 41637:7897-7916 | MS.gene067369:CDS | 45.0% | |
| TGTTTCGTCTCAATCCAGAC+TGG | + | 41637:10095-10114 | MS.gene067369:intron | 45.0% | |
| TTCATAGCATGCGATGTCAC+CGG | + | 41637:10924-10943 | MS.gene067369:intron | 45.0% | |
| ! | CGCTTTAGATATCCGGTCTT+AGG | - | 41637:8820-8839 | MS.gene067369:intergenic | 45.0% |
| ! | CTCGATGCAGGTGTTGTATA+AGG | + | 41637:11110-11129 | MS.gene067369:intron | 45.0% |
| ! | GTTGCAGCTCCTTTGATGAT+AGG | - | 41637:10418-10437 | MS.gene067369:intergenic | 45.0% |
| ! | TGCAGCTCCTTTGATGATAG+GGG | - | 41637:10416-10435 | MS.gene067369:intergenic | 45.0% |
| !! | GCAGTTCACTCTGAAACATC+AGG | + | 41637:11255-11274 | MS.gene067369:CDS | 45.0% |
| AAAGCGGGGGAGAAGAAACT+GGG | + | 41637:10564-10583 | MS.gene067369:CDS | 50.0% | |
| AAGGTTAGGTGCACATGCAC+TGG | + | 41637:10122-10141 | MS.gene067369:intron | 50.0% | |
| ACCTTACTCACGCCTAAGAC+CGG | + | 41637:8805-8824 | MS.gene067369:intron | 50.0% | |
| AGTTGCATGGCATCATCCCT+AGG | - | 41637:7916-7935 | MS.gene067369:intergenic | 50.0% | |
| ATGGCATCATCCCTAGGAGA+AGG | - | 41637:7910-7929 | MS.gene067369:intergenic | 50.0% | |
| ATTTCTGCATCACGTGCTGC+AGG | - | 41637:9649-9668 | MS.gene067369:intergenic | 50.0% | |
| CACTTCCGGGGATCATCAAA+AGG | + | 41637:9813-9832 | MS.gene067369:CDS | 50.0% | |
| CTAGGAGAAGGAGGAATTGG+AGG | - | 41637:7898-7917 | MS.gene067369:intergenic | 50.0% | |
| CTCCAATTCCTCCTTCTCCT+AGG | + | 41637:7896-7915 | MS.gene067369:CDS | 50.0% | |
| TATTAACCTCGAGGCCTTCG+TGG | - | 41637:10509-10528 | MS.gene067369:intergenic | 50.0% | |
| TCCCTAGGAGAAGGAGGAAT+TGG | - | 41637:7901-7920 | MS.gene067369:intergenic | 50.0% | |
| TGAAGCACAGACACCCCTAA+AGG | - | 41637:10908-10927 | MS.gene067369:intergenic | 50.0% | |
| TTACTTCGGTGGCAGCTTCA+AGG | - | 41637:9702-9721 | MS.gene067369:intergenic | 50.0% | |
| TTTCTGCATCACGTGCTGCA+GGG | - | 41637:9648-9667 | MS.gene067369:intergenic | 50.0% | |
| ! | GCAGCTCCTTTGATGATAGG+GGG | - | 41637:10415-10434 | MS.gene067369:intergenic | 50.0% |
| ! | GTAGCCGTTCAGTTTGCTTC+TGG | + | 41637:10367-10386 | MS.gene067369:intron | 50.0% |
| ! | TCACACTTTTGCCTCGATGC+AGG | + | 41637:11098-11117 | MS.gene067369:intron | 50.0% |
| !! | CCACACCTTTTGATGATCCC+CGG | - | 41637:9821-9840 | MS.gene067369:intergenic | 50.0% |
| CAAAGCGGGGGAGAAGAAAC+TGG | + | 41637:10563-10582 | MS.gene067369:CDS | 55.0% | |
| CCGGGGATCATCAAAAGGTG+TGG | + | 41637:9818-9837 | MS.gene067369:intron | 55.0% | |
| GCATCATCCCTAGGAGAAGG+AGG | - | 41637:7907-7926 | MS.gene067369:intergenic | 55.0% | |
| TCCGGTCTTAGGCGTGAGTA+AGG | - | 41637:8809-8828 | MS.gene067369:intergenic | 55.0% | |
| TGAACGGAGCAGCGCACATT+TGG | + | 41637:10620-10639 | MS.gene067369:CDS | 55.0% | |
| TGCGATGTCACCGGCAAATG+TGG | + | 41637:10933-10952 | MS.gene067369:intron | 55.0% | |
| TTAACCACCCCTCGCCACGA+AGG | + | 41637:10492-10511 | MS.gene067369:CDS | 60.0% | |
| GCATCACGTGCTGCAGGGTC+AGG | - | 41637:9643-9662 | MS.gene067369:intergenic | 65.0% | |
| ACCTCGAGGCCTTCGTGGCG+AGG | - | 41637:10504-10523 | MS.gene067369:intergenic | 70.0% | |
| CCTCGAGGCCTTCGTGGCGA+GGG | - | 41637:10503-10522 | MS.gene067369:intergenic | 70.0% | |
| CTCGAGGCCTTCGTGGCGAG+GGG | - | 41637:10502-10521 | MS.gene067369:intergenic | 70.0% | |
| CCCTCGCCACGAAGGCCTCG+AGG | + | 41637:10500-10519 | MS.gene067369:CDS | 75.0% | |
| GAGGCCTTCGTGGCGAGGGG+TGG | - | 41637:10499-10518 | MS.gene067369:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 41637 | gene | 7877 | 11323 | 7877 | ID=MS.gene067369 |
| 41637 | mRNA | 7877 | 11323 | 7877 | ID=MS.gene067369.t1;Parent=MS.gene067369 |
| 41637 | exon | 7877 | 7952 | 7877 | ID=MS.gene067369.t1.exon1;Parent=MS.gene067369.t1 |
| 41637 | CDS | 7877 | 7952 | 7877 | ID=cds.MS.gene067369.t1;Parent=MS.gene067369.t1 |
| 41637 | exon | 9285 | 9430 | 9285 | ID=MS.gene067369.t1.exon2;Parent=MS.gene067369.t1 |
| 41637 | CDS | 9285 | 9430 | 9285 | ID=cds.MS.gene067369.t1;Parent=MS.gene067369.t1 |
| 41637 | exon | 9619 | 9834 | 9619 | ID=MS.gene067369.t1.exon3;Parent=MS.gene067369.t1 |
| 41637 | CDS | 9619 | 9834 | 9619 | ID=cds.MS.gene067369.t1;Parent=MS.gene067369.t1 |
| 41637 | exon | 10477 | 10692 | 10477 | ID=MS.gene067369.t1.exon4;Parent=MS.gene067369.t1 |
| 41637 | CDS | 10477 | 10692 | 10477 | ID=cds.MS.gene067369.t1;Parent=MS.gene067369.t1 |
| 41637 | exon | 10773 | 10862 | 10773 | ID=MS.gene067369.t1.exon5;Parent=MS.gene067369.t1 |
| 41637 | CDS | 10773 | 10862 | 10773 | ID=cds.MS.gene067369.t1;Parent=MS.gene067369.t1 |
| 41637 | exon | 11120 | 11323 | 11120 | ID=MS.gene067369.t1.exon6;Parent=MS.gene067369.t1 |
| 41637 | CDS | 11120 | 11323 | 11120 | ID=cds.MS.gene067369.t1;Parent=MS.gene067369.t1 |
| Gene Sequence |
| Protein sequence |
