Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06797.t1 | XP_013461475.1 | 99.4 | 339 | 2 | 0 | 23 | 361 | 8 | 346 | 2.70E-185 | 657.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06797.t1 | A7RK30 | 38.8 | 348 | 198 | 7 | 13 | 350 | 19 | 361 | 7.4e-59 | 229.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06797.t1 | A0A072VBF3 | 99.4 | 339 | 2 | 0 | 23 | 361 | 8 | 346 | 1.9e-185 | 657.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049424 | MS.gene06797 | 0.961993 | 2.37E-120 | -1.69E-46 |
| MS.gene049653 | MS.gene06797 | 0.800745 | 1.25E-48 | -1.69E-46 |
| MS.gene050119 | MS.gene06797 | 0.808099 | 3.66E-50 | -1.69E-46 |
| MS.gene051241 | MS.gene06797 | 0.805413 | 1.35E-49 | -1.69E-46 |
| MS.gene051349 | MS.gene06797 | 0.806476 | 8.07E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene06797 | 0.815765 | 7.82E-52 | -1.69E-46 |
| MS.gene052500 | MS.gene06797 | 0.814797 | 1.28E-51 | -1.69E-46 |
| MS.gene052502 | MS.gene06797 | 0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene052824 | MS.gene06797 | 0.802149 | 6.43E-49 | -1.69E-46 |
| MS.gene052826 | MS.gene06797 | 0.803932 | 2.75E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene06797 | 0.804398 | 2.20E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene06797 | 0.814876 | 1.23E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene06797 | 0.814076 | 1.85E-51 | -1.69E-46 |
| MS.gene057392 | MS.gene06797 | 0.821114 | 4.79E-53 | -1.69E-46 |
| MS.gene05795 | MS.gene06797 | 0.81922 | 1.30E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene06797 | 0.80041 | 1.46E-48 | -1.69E-46 |
| MS.gene058009 | MS.gene06797 | 0.823239 | 1.54E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene06797 | 0.812236 | 4.69E-51 | -1.69E-46 |
| MS.gene060840 | MS.gene06797 | 0.810617 | 1.05E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06797 | MS.gene01763 | PPI |
| MS.gene01359 | MS.gene06797 | PPI |
| MS.gene06797 | MS.gene01357 | PPI |
| MS.gene01765 | MS.gene06797 | PPI |
| MS.gene047515 | MS.gene06797 | PPI |
| MS.gene047518 | MS.gene06797 | PPI |
| MS.gene002379 | MS.gene06797 | PPI |
| MS.gene06797 | MS.gene002381 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06797.t1 | MTR_3g093620 | 99.410 | 339 | 2 | 0 | 23 | 361 | 8 | 346 | 0.0 | 680 |
| MS.gene06797.t1 | MTR_2g012420 | 31.068 | 309 | 202 | 6 | 47 | 351 | 23 | 324 | 1.33e-33 | 127 |
| MS.gene06797.t1 | MTR_4g086410 | 31.190 | 311 | 183 | 9 | 59 | 353 | 328 | 623 | 5.28e-33 | 130 |
| MS.gene06797.t1 | MTR_4g050760 | 30.795 | 302 | 197 | 4 | 55 | 351 | 30 | 324 | 1.31e-31 | 122 |
| MS.gene06797.t1 | MTR_2g012380 | 30.795 | 302 | 197 | 4 | 55 | 351 | 30 | 324 | 1.31e-31 | 122 |
| MS.gene06797.t1 | MTR_4g086400 | 31.270 | 307 | 188 | 9 | 59 | 353 | 188 | 483 | 4.95e-31 | 123 |
| MS.gene06797.t1 | MTR_4g086400 | 31.270 | 307 | 188 | 9 | 59 | 353 | 328 | 623 | 1.04e-30 | 123 |
| MS.gene06797.t1 | MTR_2g012380 | 32.927 | 246 | 153 | 4 | 55 | 295 | 30 | 268 | 1.01e-28 | 112 |
| MS.gene06797.t1 | MTR_4g029500 | 30.100 | 299 | 201 | 5 | 55 | 351 | 81 | 373 | 1.10e-28 | 115 |
| MS.gene06797.t1 | MTR_8g064610 | 29.773 | 309 | 170 | 11 | 55 | 350 | 106 | 380 | 8.94e-24 | 101 |
| MS.gene06797.t1 | MTR_2g012420 | 28.745 | 247 | 172 | 2 | 106 | 351 | 10 | 253 | 5.71e-20 | 88.6 |
| MS.gene06797.t1 | MTR_4g050710 | 28.745 | 247 | 172 | 2 | 106 | 351 | 4 | 247 | 7.70e-20 | 87.8 |
| MS.gene06797.t1 | MTR_6g012170 | 28.213 | 319 | 179 | 11 | 45 | 350 | 35 | 316 | 5.33e-18 | 84.0 |
| MS.gene06797.t1 | MTR_6g012160 | 32.099 | 243 | 138 | 8 | 45 | 276 | 35 | 261 | 1.21e-17 | 82.8 |
| MS.gene06797.t1 | MTR_7g034395 | 29.012 | 324 | 176 | 11 | 43 | 350 | 28 | 313 | 3.95e-16 | 78.6 |
| MS.gene06797.t1 | MTR_7g406860 | 26.335 | 281 | 183 | 8 | 83 | 350 | 72 | 341 | 5.04e-16 | 78.6 |
| MS.gene06797.t1 | MTR_8g095220 | 25.301 | 249 | 168 | 8 | 107 | 350 | 187 | 422 | 2.78e-14 | 73.9 |
| MS.gene06797.t1 | MTR_2g012420 | 28.497 | 193 | 134 | 2 | 160 | 351 | 3 | 192 | 4.97e-14 | 70.5 |
| MS.gene06797.t1 | MTR_4g036310 | 33.149 | 181 | 107 | 5 | 45 | 215 | 29 | 205 | 7.58e-14 | 72.0 |
| MS.gene06797.t1 | MTR_2g095840 | 27.715 | 267 | 182 | 5 | 32 | 291 | 46 | 308 | 4.41e-13 | 70.1 |
| MS.gene06797.t1 | MTR_4g033205 | 30.601 | 183 | 109 | 6 | 45 | 215 | 29 | 205 | 3.48e-12 | 67.0 |
| MS.gene06797.t1 | MTR_4g032995 | 30.601 | 183 | 109 | 6 | 45 | 215 | 29 | 205 | 3.57e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06797.t1 | AT3G56460 | 76.923 | 338 | 77 | 1 | 23 | 359 | 8 | 345 | 0.0 | 509 |
| MS.gene06797.t1 | AT1G49670 | 31.546 | 317 | 184 | 10 | 59 | 358 | 328 | 628 | 2.19e-31 | 125 |
| MS.gene06797.t1 | AT1G49670 | 30.088 | 339 | 183 | 12 | 59 | 358 | 328 | 651 | 2.49e-29 | 119 |
| MS.gene06797.t1 | AT4G21580 | 29.866 | 298 | 203 | 4 | 55 | 350 | 30 | 323 | 2.38e-28 | 113 |
| MS.gene06797.t1 | AT5G61510 | 29.431 | 299 | 203 | 5 | 55 | 351 | 56 | 348 | 1.31e-25 | 105 |
| MS.gene06797.t1 | AT4G21580 | 29.195 | 298 | 199 | 5 | 55 | 350 | 30 | 317 | 1.55e-25 | 105 |
| MS.gene06797.t1 | AT5G61510 | 29.431 | 299 | 203 | 5 | 55 | 351 | 113 | 405 | 2.41e-25 | 106 |
| MS.gene06797.t1 | AT4G21580 | 28.571 | 294 | 204 | 4 | 59 | 350 | 1 | 290 | 7.90e-25 | 102 |
| MS.gene06797.t1 | AT1G23740 | 26.852 | 324 | 189 | 11 | 40 | 350 | 94 | 382 | 2.31e-23 | 100 |
| MS.gene06797.t1 | AT3G15090 | 27.353 | 340 | 199 | 13 | 40 | 352 | 48 | 366 | 1.83e-17 | 83.2 |
| MS.gene06797.t1 | AT4G13010 | 35.359 | 181 | 105 | 6 | 45 | 215 | 27 | 205 | 8.17e-14 | 72.0 |
| MS.gene06797.t1 | AT3G45770 | 25.329 | 304 | 210 | 7 | 6 | 295 | 17 | 317 | 9.21e-14 | 72.4 |
| MS.gene06797.t1 | AT5G63620 | 25.000 | 236 | 164 | 5 | 115 | 347 | 196 | 421 | 1.46e-12 | 68.9 |
| MS.gene06797.t1 | AT5G63620 | 25.000 | 236 | 164 | 5 | 115 | 347 | 196 | 421 | 3.49e-12 | 67.8 |
| MS.gene06797.t1 | AT3G45770 | 26.667 | 240 | 168 | 4 | 61 | 295 | 3 | 239 | 5.80e-12 | 66.2 |
Find 100 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGCGAACATTCTAATAAT+TGG | 0.169619 | 3.3:-77977817 | MS.gene06797:CDS |
| GCTAATTACTTGCAGATTCT+TGG | 0.190783 | 3.3:-77979258 | MS.gene06797:CDS |
| TGATTCTTGGATATGATTAT+TGG | 0.197695 | 3.3:+77979348 | None:intergenic |
| CTTAAGGTCAAAAGGCTTAA+AGG | 0.221379 | 3.3:-77977907 | MS.gene06797:CDS |
| GGACAGTACATGGACTTTAT+TGG | 0.229971 | 3.3:-77976033 | MS.gene06797:CDS |
| GACAGTACATGGACTTTATT+GGG | 0.241684 | 3.3:-77976032 | MS.gene06797:CDS |
| CCTCCTTTGCCATTCATTCC+TGG | 0.241695 | 3.3:-77979219 | MS.gene06797:CDS |
| GTTTGTTCCTTTGCTGCTCT+TGG | 0.265097 | 3.3:-77979129 | MS.gene06797:CDS |
| GGAGCACTTGCTGTGGCATT+TGG | 0.265900 | 3.3:-77978790 | MS.gene06797:CDS |
| TTCATGAGCTTGCCTCCTAC+TGG | 0.267191 | 3.3:+77977865 | None:intergenic |
| AGGATCACCAACACGGAAAT+TGG | 0.272120 | 3.3:+77979152 | None:intergenic |
| TTTGTAGGTATTGCTAGTTT+TGG | 0.301867 | 3.3:-77978623 | MS.gene06797:intron |
| GATTCTTGGATATGATTATT+GGG | 0.311570 | 3.3:+77979349 | None:intergenic |
| TGTTGATCATGTGGTGGACT+TGG | 0.319846 | 3.3:-77977965 | MS.gene06797:CDS |
| AATCTTTGCGGCTTCTGAAA+TGG | 0.328075 | 3.3:-77977840 | MS.gene06797:CDS |
| TTAAGGTCAAAAGGCTTAAA+GGG | 0.333113 | 3.3:-77977906 | MS.gene06797:CDS |
| CTCCTACATCGGTTAGAGTT+AGG | 0.333628 | 3.3:-77979305 | MS.gene06797:CDS |
| ATCTTTGCGGCTTCTGAAAT+GGG | 0.343716 | 3.3:-77977839 | MS.gene06797:CDS |
| GGTTGTGATTTGGTTGCTGC+TGG | 0.359205 | 3.3:-77978811 | MS.gene06797:CDS |
| TTGAGGGATAGGGTGATTCT+TGG | 0.360038 | 3.3:+77979335 | None:intergenic |
| CGTCTTCAACGCTCACCGTT+GGG | 0.366387 | 3.3:+77979379 | None:intergenic |
| TTCCTTACCTTAAATGGTTG+TGG | 0.375638 | 3.3:-77979499 | None:intergenic |
| ATCAGAGATAGGAAAGCTAT+AGG | 0.384250 | 3.3:-77975145 | MS.gene06797:CDS |
| GAGCGAACATTCTAATAATT+GGG | 0.396914 | 3.3:-77977816 | MS.gene06797:CDS |
| GGTCTTGCAGCTGTGCAAAT+TGG | 0.397069 | 3.3:-77978583 | MS.gene06797:CDS |
| GAATCACCCTATCCCTCAAT+TGG | 0.401681 | 3.3:-77979331 | MS.gene06797:CDS |
| CCTTCACTGCCATCAGAGAT+AGG | 0.409182 | 3.3:-77975156 | MS.gene06797:CDS |
| AATTTGTAGGTTTCGCGTGC+CGG | 0.416854 | 3.3:-77978836 | MS.gene06797:intron |
| CATAGAGCTCAGTTGAAATC+TGG | 0.418835 | 3.3:-77978745 | MS.gene06797:CDS |
| CGTGCCGGAGGGTTGTGATT+TGG | 0.423686 | 3.3:-77978821 | MS.gene06797:CDS |
| GTTCACATTTCTCATTCTTA+CGG | 0.428188 | 3.3:-77975926 | MS.gene06797:CDS |
| AGAGAATCTTCAAGAACAGC+TGG | 0.435112 | 3.3:+77975989 | None:intergenic |
| TCGTCTTCAACGCTCACCGT+TGG | 0.443222 | 3.3:+77979378 | None:intergenic |
| TCAATTGGATTCTCCTACAT+CGG | 0.456528 | 3.3:-77979316 | MS.gene06797:CDS |
| GGAGAATCCAATTGAGGGAT+AGG | 0.460120 | 3.3:+77979324 | None:intergenic |
| TTGGGTGCAGCAGGAGGTGT+GGG | 0.460493 | 3.3:-77978604 | MS.gene06797:CDS |
| AAGAGTTCCTTAAGGTCAAA+AGG | 0.464102 | 3.3:-77977915 | MS.gene06797:CDS |
| TCAGGCATCGTTGATTCCGT+TGG | 0.466758 | 3.3:-77979186 | MS.gene06797:CDS |
| GGTGCAGCTCTTGAAATCAA+TGG | 0.469140 | 3.3:-77977989 | MS.gene06797:CDS |
| CTACTGTCTTGGTTGGCAAA+AGG | 0.470601 | 3.3:-77975959 | MS.gene06797:CDS |
| TCAGAGATAGGAAAGCTATA+GGG | 0.473276 | 3.3:-77975144 | MS.gene06797:CDS |
| AAATCTGATCCAGGAATGAA+TGG | 0.473348 | 3.3:+77979210 | None:intergenic |
| TTAACAAGAGCTATGTTAGC+AGG | 0.478741 | 3.3:+77977766 | None:intergenic |
| TCATGAGCTTGCCTCCTACT+GGG | 0.478839 | 3.3:+77977866 | None:intergenic |
| GCTATGTTAGCAGGGATGAC+AGG | 0.479328 | 3.3:+77977775 | None:intergenic |
| GTGCAGCTCTTGAAATCAAT+GGG | 0.486437 | 3.3:-77977988 | MS.gene06797:CDS |
| AGCTCAGTTGAAATCTGGTC+AGG | 0.487489 | 3.3:-77978740 | MS.gene06797:intron |
| TGCCTCCTACTGGGTCATAC+AGG | 0.492735 | 3.3:+77977875 | None:intergenic |
| TGCTAACATAGCTCTTGTTA+AGG | 0.494266 | 3.3:-77977764 | MS.gene06797:intron |
| GATGGCAGTGAAGGCGAGGT+TGG | 0.495840 | 3.3:+77975165 | None:intergenic |
| CTCTCAAGGAGCTACTGTCT+TGG | 0.497731 | 3.3:-77975970 | MS.gene06797:CDS |
| GTTTCATTACATAACAGAAT+CGG | 0.505113 | 3.3:-77979460 | MS.gene06797:CDS |
| GCATTTGGCACTTCACATGT+TGG | 0.508528 | 3.3:-77978775 | MS.gene06797:CDS |
| TGCTGCTGGAGCACTTGCTG+TGG | 0.510040 | 3.3:-77978797 | MS.gene06797:CDS |
| GTTGATCATGTGGTGGACTT+GGG | 0.511415 | 3.3:-77977964 | MS.gene06797:CDS |
| TGGCAGAATTGGACAGTACA+TGG | 0.511468 | 3.3:-77976043 | MS.gene06797:intron |
| TTTGGGTGCAGCAGGAGGTG+TGG | 0.512176 | 3.3:-77978605 | MS.gene06797:CDS |
| AGAGCAGCAAAGGAACAAAC+AGG | 0.514377 | 3.3:+77979132 | None:intergenic |
| CTATTGTCATTGCTGTTGCT+AGG | 0.516037 | 3.3:-77978546 | MS.gene06797:intron |
| TGTAGGTTTCGCGTGCCGGA+GGG | 0.517884 | 3.3:-77978832 | MS.gene06797:intron |
| TTGTAGGTTTCGCGTGCCGG+AGG | 0.522078 | 3.3:-77978833 | MS.gene06797:intron |
| AACACGGAAATTGGTAACAT+TGG | 0.526095 | 3.3:+77979161 | None:intergenic |
| TATAGCTTTCCTATCTCTGA+TGG | 0.527406 | 3.3:+77975147 | None:intergenic |
| AATGTTACCAATTTCCGTGT+TGG | 0.534038 | 3.3:-77979159 | MS.gene06797:CDS |
| ATCCTAACTCTAACCGATGT+AGG | 0.537658 | 3.3:+77979303 | None:intergenic |
| ATGTAGGAGAATCCAATTGA+GGG | 0.540400 | 3.3:+77979319 | None:intergenic |
| CTAATAATTGGGTTTGCAAG+TGG | 0.543319 | 3.3:-77977805 | MS.gene06797:CDS |
| AGCTCATGAAAGAATCTTTG+CGG | 0.548659 | 3.3:-77977852 | MS.gene06797:CDS |
| ATTAGCGAAATTCAAGCTTG+TGG | 0.550287 | 3.3:+77979275 | None:intergenic |
| ATAAGATCCAAGAGCAGCAA+AGG | 0.551039 | 3.3:+77979122 | None:intergenic |
| CCTATCTCTGATGGCAGTGA+AGG | 0.555242 | 3.3:+77975156 | None:intergenic |
| CCAGGAATGAATGGCAAAGG+AGG | 0.564534 | 3.3:+77979219 | None:intergenic |
| CTCTGATGGCAGTGAAGGCG+AGG | 0.567574 | 3.3:+77975161 | None:intergenic |
| CAAGGAGCTACTGTCTTGGT+TGG | 0.572684 | 3.3:-77975966 | MS.gene06797:CDS |
| TGTTCTTGAAGATTCTCTCA+AGG | 0.573910 | 3.3:-77975984 | MS.gene06797:CDS |
| ATTGGTAACATTGGAACCAA+CGG | 0.576019 | 3.3:+77979170 | None:intergenic |
| GAGTGTGAAAGAGTTCCTTA+AGG | 0.578196 | 3.3:-77977923 | MS.gene06797:CDS |
| GCAGATTCTTGGAAAGTACC+AGG | 0.581141 | 3.3:-77979247 | MS.gene06797:CDS |
| ATGGCAAAGGAGGTTTCTCC+TGG | 0.585688 | 3.3:+77979229 | None:intergenic |
| TGCAAATTGGAAAAGCATGT+GGG | 0.585981 | 3.3:-77978570 | MS.gene06797:CDS |
| TCATTCTTACGGCCTGTCAG+AGG | 0.586401 | 3.3:-77975915 | MS.gene06797:intron |
| GAGAATCCAATTGAGGGATA+GGG | 0.603597 | 3.3:+77979325 | None:intergenic |
| TCTTTGCGGCTTCTGAAATG+GGG | 0.609441 | 3.3:-77977838 | MS.gene06797:CDS |
| GATCCAGGAATGAATGGCAA+AGG | 0.610430 | 3.3:+77979216 | None:intergenic |
| TAACAAGAGCTATGTTAGCA+GGG | 0.614061 | 3.3:+77977767 | None:intergenic |
| GCAACCAAATCACAACCCTC+CGG | 0.621624 | 3.3:+77978817 | None:intergenic |
| CAGAAAATTGGGTGACCCAA+CGG | 0.628219 | 3.3:-77979394 | MS.gene06797:CDS |
| ATCAATGGGTGTTGATCATG+TGG | 0.629567 | 3.3:-77977974 | MS.gene06797:CDS |
| AACAAACAGGATCACCAACA+CGG | 0.633492 | 3.3:+77979145 | None:intergenic |
| GATGTAGGAGAATCCAATTG+AGG | 0.636037 | 3.3:+77979318 | None:intergenic |
| AGATAGGAAAGCTATAGGGA+AGG | 0.636916 | 3.3:-77975140 | MS.gene06797:CDS |
| GTCCTGTATGACCCAGTAGG+AGG | 0.637191 | 3.3:-77977877 | MS.gene06797:CDS |
| GTGCAAATTGGAAAAGCATG+TGG | 0.641885 | 3.3:-77978571 | MS.gene06797:CDS |
| GATGTCCTGTATGACCCAGT+AGG | 0.653197 | 3.3:-77977880 | MS.gene06797:CDS |
| GAGAATCTTCAAGAACAGCT+GGG | 0.655056 | 3.3:+77975990 | None:intergenic |
| AATGGGTGTTGATCATGTGG+TGG | 0.686665 | 3.3:-77977971 | MS.gene06797:CDS |
| ACAGTACATGGACTTTATTG+GGG | 0.692527 | 3.3:-77976031 | MS.gene06797:CDS |
| GTAAGAATGAGAAATGTGAA+CGG | 0.692858 | 3.3:+77975928 | None:intergenic |
| TATGTAATGAAACTGTGCAA+CGG | 0.714820 | 3.3:+77979470 | None:intergenic |
| GCAAATTGGAAAAGCATGTG+GGG | 0.732786 | 3.3:-77978569 | MS.gene06797:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTTAAACTAAAAAAAT+AGG | + | chr3.3:77979225-77979244 | None:intergenic | 10.0% |
| !! | AAATACACAAATTATTAGAA+CGG | + | chr3.3:77978714-77978733 | None:intergenic | 15.0% |
| !! | AACAAAAAATGACATATAAA+TGG | - | chr3.3:77977352-77977371 | MS.gene06797:intron | 15.0% |
| !! | ACAAAAAATGACATATAAAT+GGG | - | chr3.3:77977353-77977372 | MS.gene06797:intron | 15.0% |
| !! | TATAAATTCTTTGAATTTGT+AGG | - | chr3.3:77975733-77975752 | MS.gene06797:intron | 15.0% |
| !! | TATTTGGTATATAATGAAAA+AGG | - | chr3.3:77977823-77977842 | MS.gene06797:CDS | 15.0% |
| !! | TTATGTATGTAGTTTAAATT+AGG | + | chr3.3:77978136-77978155 | None:intergenic | 15.0% |
| !!! | AAATATTTTATGGATTATGT+TGG | - | chr3.3:77979182-77979201 | MS.gene06797:CDS | 15.0% |
| !!! | AATTTTGGTGAAATATTTTA+TGG | - | chr3.3:77979172-77979191 | MS.gene06797:CDS | 15.0% |
| !!! | TAAAGTTATAGTTGTTTTAT+GGG | - | chr3.3:77976320-77976339 | MS.gene06797:intron | 15.0% |
| !!! | TTACTGAATCTTTTTTTTTT+GGG | - | chr3.3:77978847-77978866 | MS.gene06797:intron | 15.0% |
| !!! | TTTACTGAATCTTTTTTTTT+TGG | - | chr3.3:77978846-77978865 | MS.gene06797:intron | 15.0% |
| !! | AAACAGAACAATATATACAT+TGG | + | chr3.3:77975904-77975923 | None:intergenic | 20.0% |
| !! | AAATAAATGCACAAATTGTA+TGG | + | chr3.3:77977187-77977206 | None:intergenic | 20.0% |
| !! | AATAAATGCACAAATTGTAT+GGG | + | chr3.3:77977186-77977205 | None:intergenic | 20.0% |
| !! | AATTTGATATACTGTATACT+TGG | - | chr3.3:77979239-77979258 | MS.gene06797:CDS | 20.0% |
| !! | ACATTCTATGATAATCAATT+CGG | - | chr3.3:77976968-77976987 | MS.gene06797:intron | 20.0% |
| !! | ATAATCAATTCGGAATTAAT+TGG | - | chr3.3:77976978-77976997 | MS.gene06797:intron | 20.0% |
| !! | ATTTGATATACTGTATACTT+GGG | - | chr3.3:77979240-77979259 | MS.gene06797:CDS | 20.0% |
| !! | TAAAATTCAATGTACATTCA+AGG | - | chr3.3:77978746-77978765 | MS.gene06797:CDS | 20.0% |
| !! | TAATCAATTCGGAATTAATT+GGG | - | chr3.3:77976979-77976998 | MS.gene06797:intron | 20.0% |
| !! | TCATTATATACCAAATATGT+AGG | + | chr3.3:77977820-77977839 | None:intergenic | 20.0% |
| !! | TCCCATATAAATAAAAGAAA+AGG | - | chr3.3:77978069-77978088 | MS.gene06797:intron | 20.0% |
| !! | TTAATGTAAATATGCAATGT+GGG | + | chr3.3:77978278-77978297 | None:intergenic | 20.0% |
| !!! | AGCCTTTTCTTTTATTTATA+TGG | + | chr3.3:77978074-77978093 | None:intergenic | 20.0% |
| !!! | AGTGATTTTAACAAACAAAA+AGG | + | chr3.3:77978518-77978537 | None:intergenic | 20.0% |
| !!! | CTCGTTAGTTTTTAAAATTT+TGG | - | chr3.3:77979157-77979176 | MS.gene06797:CDS | 20.0% |
| !!! | GCCTTTTCTTTTATTTATAT+GGG | + | chr3.3:77978073-77978092 | None:intergenic | 20.0% |
| !!! | GTAAAGTTATAGTTGTTTTA+TGG | - | chr3.3:77976319-77976338 | MS.gene06797:intron | 20.0% |
| ! | AAACAATTTCTTATTGTTGC+AGG | - | chr3.3:77979394-77979413 | MS.gene06797:CDS | 25.0% |
| ! | AAATAATGTCATCAGTTACA+TGG | - | chr3.3:77977139-77977158 | MS.gene06797:intron | 25.0% |
| ! | AAATAGATATGTACTAAGCA+TGG | - | chr3.3:77977429-77977448 | MS.gene06797:intron | 25.0% |
| ! | AAGACTACATTAGACAATAA+AGG | - | chr3.3:77977929-77977948 | MS.gene06797:CDS | 25.0% |
| ! | AGATACATAGCATAAAGTAA+CGG | + | chr3.3:77977675-77977694 | None:intergenic | 25.0% |
| ! | AGATACATTCACGTAAAAAT+GGG | - | chr3.3:77975642-77975661 | MS.gene06797:intron | 25.0% |
| ! | ATCAATGCTGAAAAATATAC+AGG | - | chr3.3:77977315-77977334 | MS.gene06797:intron | 25.0% |
| ! | CTTAATGTAAATATGCAATG+TGG | + | chr3.3:77978279-77978298 | None:intergenic | 25.0% |
| ! | GATTCTTGGATATGATTATT+GGG | + | chr3.3:77975236-77975255 | None:intergenic | 25.0% |
| ! | GTAGATATATATCACAACTT+TGG | + | chr3.3:77977792-77977811 | None:intergenic | 25.0% |
| ! | GTATATATTGTTCTGTTTGT+TGG | - | chr3.3:77975906-77975925 | MS.gene06797:intron | 25.0% |
| ! | GTTTCATTACATAACAGAAT+CGG | - | chr3.3:77975122-77975141 | MS.gene06797:CDS | 25.0% |
| ! | TAAAAACTAACGAGAATAGA+AGG | + | chr3.3:77979151-77979170 | None:intergenic | 25.0% |
| ! | TAGATACATTCACGTAAAAA+TGG | - | chr3.3:77975641-77975660 | MS.gene06797:intron | 25.0% |
| ! | TGATTCTTGGATATGATTAT+TGG | + | chr3.3:77975237-77975256 | None:intergenic | 25.0% |
| ! | TTAAAATTAGTGAGTGGTTA+GGG | - | chr3.3:77978980-77978999 | MS.gene06797:intron | 25.0% |
| ! | TTTACATTAAGAGAAATGCT+AGG | - | chr3.3:77978288-77978307 | MS.gene06797:intron | 25.0% |
| !! | AGTTCAATGTTCATTTTCTT+GGG | - | chr3.3:77978941-77978960 | MS.gene06797:intron | 25.0% |
| !! | GCTTAGCTAAAATGAATTTT+GGG | - | chr3.3:77976272-77976291 | MS.gene06797:intron | 25.0% |
| !! | TAGTTCAATGTTCATTTTCT+TGG | - | chr3.3:77978940-77978959 | MS.gene06797:intron | 25.0% |
| !! | TGTAACTGATGACATTATTT+TGG | + | chr3.3:77977139-77977158 | None:intergenic | 25.0% |
| !! | TTGTAGCTTCTTAATTTTCA+CGG | - | chr3.3:77976201-77976220 | MS.gene06797:intron | 25.0% |
| !! | TTTGTTTGTTAAAATCACTC+TGG | - | chr3.3:77978519-77978538 | MS.gene06797:intron | 25.0% |
| !!! | ACTTTTGTTTAAATACACAC+AGG | - | chr3.3:77976409-77976428 | MS.gene06797:intron | 25.0% |
| !!! | AGTTTTTTCAAGGTTAGTTA+GGG | + | chr3.3:77977559-77977578 | None:intergenic | 25.0% |
| !!! | CGTAAAAATGGGTTAAATAA+TGG | - | chr3.3:77975653-77975672 | MS.gene06797:intron | 25.0% |
| !!! | TAGTTTTTTCAAGGTTAGTT+AGG | + | chr3.3:77977560-77977579 | None:intergenic | 25.0% |
| AAATCGCTACAATACTCTAA+TGG | - | chr3.3:77978170-77978189 | MS.gene06797:intron | 30.0% | |
| AAATTAGGTTCCAAGATTCA+AGG | + | chr3.3:77978121-77978140 | None:intergenic | 30.0% | |
| AACTAAACTAGTGAGATCTT+TGG | - | chr3.3:77978215-77978234 | MS.gene06797:intron | 30.0% | |
| AAGAAACATACTGAATACCT+AGG | - | chr3.3:77977971-77977990 | MS.gene06797:CDS | 30.0% | |
| AATTCGGAATTAATTGGGAA+GGG | - | chr3.3:77976984-77977003 | MS.gene06797:intron | 30.0% | |
| ACTAAGAAATAACTGACCTA+TGG | - | chr3.3:77977759-77977778 | MS.gene06797:intron | 30.0% | |
| AGGATTTAGTCATATGTATG+AGG | + | chr3.3:77978101-77978120 | None:intergenic | 30.0% | |
| ATGACTAAATCCTTGAATCT+TGG | - | chr3.3:77978108-77978127 | MS.gene06797:intron | 30.0% | |
| CAAACACACACTAAATAAAC+GGG | + | chr3.3:77975540-77975559 | None:intergenic | 30.0% | |
| CCAAACACACACTAAATAAA+CGG | + | chr3.3:77975541-77975560 | None:intergenic | 30.0% | |
| CTAAGAAATAACTGACCTAT+GGG | - | chr3.3:77977760-77977779 | MS.gene06797:intron | 30.0% | |
| CTACTGTTGTAACTCTTTAA+AGG | - | chr3.3:77978797-77978816 | MS.gene06797:CDS | 30.0% | |
| CTTAACACTCATTCTCTTAT+TGG | + | chr3.3:77978418-77978437 | None:intergenic | 30.0% | |
| GAGCGAACATTCTAATAATT+GGG | - | chr3.3:77976766-77976785 | MS.gene06797:intron | 30.0% | |
| GCAAATCAACAATGACTAAA+AGG | + | chr3.3:77977221-77977240 | None:intergenic | 30.0% | |
| GTAAGAATGAGAAATGTGAA+CGG | + | chr3.3:77978657-77978676 | None:intergenic | 30.0% | |
| GTTAAAATTAGTGAGTGGTT+AGG | - | chr3.3:77978979-77978998 | MS.gene06797:intron | 30.0% | |
| GTTCACATTTCTCATTCTTA+CGG | - | chr3.3:77978656-77978675 | MS.gene06797:intron | 30.0% | |
| TATGTAATGAAACTGTGCAA+CGG | + | chr3.3:77975115-77975134 | None:intergenic | 30.0% | |
| TATTAGAACGGATAAGACAA+GGG | + | chr3.3:77978702-77978721 | None:intergenic | 30.0% | |
| TCATATTTACTAATGCCCAT+TGG | + | chr3.3:77979114-77979133 | None:intergenic | 30.0% | |
| TCTTAGTGATGAGATAGAAA+AGG | + | chr3.3:77977746-77977765 | None:intergenic | 30.0% | |
| TGATGAGAAATTGTCATATG+TGG | + | chr3.3:77977021-77977040 | None:intergenic | 30.0% | |
| TGTTATTATCTTGTCTTGCT+TGG | - | chr3.3:77976866-77976885 | MS.gene06797:intron | 30.0% | |
| TTAAGGTCAAAAGGCTTAAA+GGG | - | chr3.3:77976676-77976695 | MS.gene06797:intron | 30.0% | |
| TTATTAGAACGGATAAGACA+AGG | + | chr3.3:77978703-77978722 | None:intergenic | 30.0% | |
| TTATTGGATGAAATCCATGT+AGG | + | chr3.3:77978402-77978421 | None:intergenic | 30.0% | |
| TTGTAGCGATTTAATCACAA+TGG | + | chr3.3:77978162-77978181 | None:intergenic | 30.0% | |
| TTTCAGCTTCACTATCTTAA+AGG | + | chr3.3:77977634-77977653 | None:intergenic | 30.0% | |
| ! | AAAGATCTCACTAGTTTAGT+TGG | + | chr3.3:77978216-77978235 | None:intergenic | 30.0% |
| ! | AAGATCTCACTAGTTTAGTT+GGG | + | chr3.3:77978215-77978234 | None:intergenic | 30.0% |
| ! | ATATTGTTCTGTTTGTTGGT+GGG | - | chr3.3:77975910-77975929 | MS.gene06797:intron | 30.0% |
| ! | CGCTTAGCTAAAATGAATTT+TGG | - | chr3.3:77976271-77976290 | MS.gene06797:intron | 30.0% |
| ! | GTTCAATGTTCATTTTCTTG+GGG | - | chr3.3:77978942-77978961 | MS.gene06797:intron | 30.0% |
| ! | TATATTGTTCTGTTTGTTGG+TGG | - | chr3.3:77975909-77975928 | MS.gene06797:intron | 30.0% |
| ! | TGAGGACTAGTATTATACAA+TGG | - | chr3.3:77979368-77979387 | MS.gene06797:CDS | 30.0% |
| ! | TGTTTCTTGTTTGCATAATC+TGG | - | chr3.3:77976552-77976571 | MS.gene06797:intron | 30.0% |
| ! | TTTTCACGGTATAATCACAT+CGG | - | chr3.3:77976215-77976234 | MS.gene06797:intron | 30.0% |
| !! | GGATTTTACATTGCTTTTCA+GGG | + | chr3.3:77978052-77978071 | None:intergenic | 30.0% |
| !! | GTTATAGTTGTTTTATGGGT+AGG | - | chr3.3:77976324-77976343 | MS.gene06797:intron | 30.0% |
| !! | TCGCATTTTAATCTCTAACT+TGG | - | chr3.3:77976504-77976523 | MS.gene06797:intron | 30.0% |
| !! | TTAGTGCTGACTTAACTAAT+AGG | - | chr3.3:77978903-77978922 | MS.gene06797:intron | 30.0% |
| !! | TTTGTAGGTATTGCTAGTTT+TGG | - | chr3.3:77975959-77975978 | MS.gene06797:CDS | 30.0% |
| !!! | GATGACATTATTTTGGAAGT+GGG | + | chr3.3:77977132-77977151 | None:intergenic | 30.0% |
| !!! | GTTTGCATAATCTGGTTTTA+GGG | - | chr3.3:77976560-77976579 | MS.gene06797:intron | 30.0% |
| !!! | TGATGACATTATTTTGGAAG+TGG | + | chr3.3:77977133-77977152 | None:intergenic | 30.0% |
| !!! | TGTTTGCATAATCTGGTTTT+AGG | - | chr3.3:77976559-77976578 | MS.gene06797:intron | 30.0% |
| !!! | TTGTAGGTATTGCTAGTTTT+GGG | - | chr3.3:77975960-77975979 | MS.gene06797:CDS | 30.0% |
| !!! | TTTGCATAATCTGGTTTTAG+GGG | - | chr3.3:77976561-77976580 | MS.gene06797:intron | 30.0% |
| AAAATGGATCCCACATAAAG+TGG | + | chr3.3:77978367-77978386 | None:intergenic | 35.0% | |
| AAACATACTGAATACCTAGG+TGG | - | chr3.3:77977974-77977993 | MS.gene06797:CDS | 35.0% | |
| AAATCTAGCAAACTGTGAAG+CGG | + | chr3.3:77977530-77977549 | None:intergenic | 35.0% | |
| AAATCTGATCCAGGAATGAA+TGG | + | chr3.3:77975375-77975394 | None:intergenic | 35.0% | |
| AACATACTGAATACCTAGGT+GGG | - | chr3.3:77977975-77977994 | MS.gene06797:CDS | 35.0% | |
| AAGAGTTCCTTAAGGTCAAA+AGG | - | chr3.3:77976667-77976686 | MS.gene06797:intron | 35.0% | |
| AATGTTACCAATTTCCGTGT+TGG | - | chr3.3:77975423-77975442 | MS.gene06797:intron | 35.0% | |
| ACAGTACATGGACTTTATTG+GGG | - | chr3.3:77978551-77978570 | MS.gene06797:CDS | 35.0% | |
| ACCAGGTTAAAATTAGTGAG+TGG | - | chr3.3:77978974-77978993 | MS.gene06797:intron | 35.0% | |
| ACTTGGGTCATTATAACAGT+TGG | - | chr3.3:77979256-77979275 | MS.gene06797:CDS | 35.0% | |
| AGAAAAGGACTACATCATAC+TGG | + | chr3.3:77977731-77977750 | None:intergenic | 35.0% | |
| AGATCAAGCAACAAACAATC+AGG | + | chr3.3:77976910-77976929 | None:intergenic | 35.0% | |
| AGCTCATGAAAGAATCTTTG+CGG | - | chr3.3:77976730-77976749 | MS.gene06797:intron | 35.0% | |
| AGGCAAATGATACAAACTAC+TGG | + | chr3.3:77979327-77979346 | None:intergenic | 35.0% | |
| AGTAACGGTAGTATTTAAGC+AGG | + | chr3.3:77977660-77977679 | None:intergenic | 35.0% | |
| AGTATGTTTCTTAGATGTCG+TGG | + | chr3.3:77977963-77977982 | None:intergenic | 35.0% | |
| ATCAGAGATAGGAAAGCTAT+AGG | - | chr3.3:77979437-77979456 | MS.gene06797:intron | 35.0% | |
| ATGTAGGAGAATCCAATTGA+GGG | + | chr3.3:77975266-77975285 | None:intergenic | 35.0% | |
| ATTAGCGAAATTCAAGCTTG+TGG | + | chr3.3:77975310-77975329 | None:intergenic | 35.0% | |
| ATTCGGAATTAATTGGGAAG+GGG | - | chr3.3:77976985-77977004 | MS.gene06797:intron | 35.0% | |
| CAAAAGCAACAGTCATGATA+TGG | + | chr3.3:77977086-77977105 | None:intergenic | 35.0% | |
| CAATTCGGAATTAATTGGGA+AGG | - | chr3.3:77976983-77977002 | MS.gene06797:intron | 35.0% | |
| CATGTTGCAATAATACATGC+AGG | + | chr3.3:77977587-77977606 | None:intergenic | 35.0% | |
| CCGTTTATTTAGTGTGTGTT+TGG | - | chr3.3:77975538-77975557 | MS.gene06797:intron | 35.0% | |
| CTAATAATTGGGTTTGCAAG+TGG | - | chr3.3:77976777-77976796 | MS.gene06797:intron | 35.0% | |
| CTTAAGGTCAAAAGGCTTAA+AGG | - | chr3.3:77976675-77976694 | MS.gene06797:intron | 35.0% | |
| GAACTAACATAAGAGAGCTT+TGG | + | chr3.3:77978462-77978481 | None:intergenic | 35.0% | |
| GACAGTACATGGACTTTATT+GGG | - | chr3.3:77978550-77978569 | MS.gene06797:CDS | 35.0% | |
| GCTAATTACTTGCAGATTCT+TGG | - | chr3.3:77975324-77975343 | MS.gene06797:intron | 35.0% | |
| GGAGCGAACATTCTAATAAT+TGG | - | chr3.3:77976765-77976784 | MS.gene06797:intron | 35.0% | |
| GGATAAATCAGCATGTTTAC+TGG | - | chr3.3:77978868-77978887 | MS.gene06797:intron | 35.0% | |
| TAAAATCACTCTGGCAGAAT+TGG | - | chr3.3:77978528-77978547 | MS.gene06797:intron | 35.0% | |
| TAAATATGCAATGTGGGCAA+GGG | + | chr3.3:77978272-77978291 | None:intergenic | 35.0% | |
| TAACAAGAGCTATGTTAGCA+GGG | + | chr3.3:77976818-77976837 | None:intergenic | 35.0% | |
| TAGGTCTCACACTTAGAAAA+TGG | + | chr3.3:77978383-77978402 | None:intergenic | 35.0% | |
| TAGTCCTCATTGAACATCAA+TGG | + | chr3.3:77979357-77979376 | None:intergenic | 35.0% | |
| TATAGCTTTCCTATCTCTGA+TGG | + | chr3.3:77979438-77979457 | None:intergenic | 35.0% | |
| TCAATTGGATTCTCCTACAT+CGG | - | chr3.3:77975266-77975285 | MS.gene06797:intron | 35.0% | |
| TCAGAGATAGGAAAGCTATA+GGG | - | chr3.3:77979438-77979457 | MS.gene06797:intron | 35.0% | |
| TCTACACACACCTACATATT+TGG | - | chr3.3:77977807-77977826 | MS.gene06797:CDS | 35.0% | |
| TGAACATCAATGGAGCATAT+AGG | + | chr3.3:77979347-77979366 | None:intergenic | 35.0% | |
| TGCTAACATAGCTCTTGTTA+AGG | - | chr3.3:77976818-77976837 | MS.gene06797:intron | 35.0% | |
| TGTTCTTGAAGATTCTCTCA+AGG | - | chr3.3:77978598-77978617 | MS.gene06797:CDS | 35.0% | |
| TTAACAAGAGCTATGTTAGC+AGG | + | chr3.3:77976819-77976838 | None:intergenic | 35.0% | |
| TTATTGAGTGAATCCCATGT+GGG | - | chr3.3:77978336-77978355 | MS.gene06797:intron | 35.0% | |
| TTGTGACATCAATGACCAAT+GGG | - | chr3.3:77979096-77979115 | MS.gene06797:CDS | 35.0% | |
| ! | AACACGGAAATTGGTAACAT+TGG | + | chr3.3:77975424-77975443 | None:intergenic | 35.0% |
| ! | AGCACTTTTGTGCAGAAAAT+TGG | - | chr3.3:77975176-77975195 | MS.gene06797:intron | 35.0% |
| ! | ATTCCTGGATCAGATTTTTC+AGG | - | chr3.3:77975378-77975397 | MS.gene06797:intron | 35.0% |
| ! | ATTGGTAACATTGGAACCAA+CGG | + | chr3.3:77975415-77975434 | None:intergenic | 35.0% |
| ! | CATCATACTGGCATTTTGTT+TGG | + | chr3.3:77977719-77977738 | None:intergenic | 35.0% |
| ! | CTTTAAGCCTTTTGACCTTA+AGG | + | chr3.3:77976677-77976696 | None:intergenic | 35.0% |
| ! | GAACAAAACGTGAGTTGAAA+TGG | - | chr3.3:77975152-77975171 | MS.gene06797:CDS | 35.0% |
| ! | GCACTTTTGTGCAGAAAATT+GGG | - | chr3.3:77975177-77975196 | MS.gene06797:intron | 35.0% |
| ! | GGTACATCAGGAATAGATTT+TGG | - | chr3.3:77976839-77976858 | MS.gene06797:intron | 35.0% |
| ! | TATTGTTCTGTTTGTTGGTG+GGG | - | chr3.3:77975911-77975930 | MS.gene06797:intron | 35.0% |
| ! | TGCAAATTGGAAAAGCATGT+GGG | - | chr3.3:77976012-77976031 | MS.gene06797:CDS | 35.0% |
| ! | TTGGATCTGCAAACTTTTGT+TGG | - | chr3.3:77978234-77978253 | MS.gene06797:intron | 35.0% |
| !! | ACCACTCACTAATTTTAACC+TGG | + | chr3.3:77978978-77978997 | None:intergenic | 35.0% |
| !! | GGGATTTTACATTGCTTTTC+AGG | + | chr3.3:77978053-77978072 | None:intergenic | 35.0% |
| !! | TATGTTAGTTCTGCTATAGC+TGG | - | chr3.3:77978471-77978490 | MS.gene06797:intron | 35.0% |
| !!! | CATTGATTTTCACTTGACAG+TGG | + | chr3.3:77977302-77977321 | None:intergenic | 35.0% |
| !!! | CTGGGGAATTTTTAGTTATC+TGG | - | chr3.3:77977865-77977884 | MS.gene06797:CDS | 35.0% |
| !!! | CTTCACAGTTTGCTAGATTT+TGG | - | chr3.3:77977530-77977549 | MS.gene06797:intron | 35.0% |
| !!! | GGAATTTTTAGTTATCTGGC+TGG | - | chr3.3:77977869-77977888 | MS.gene06797:CDS | 35.0% |
| AAATTAGTGAGTGGTTAGGG+TGG | - | chr3.3:77978983-77979002 | MS.gene06797:intron | 40.0% | |
| AACAAACAGGATCACCAACA+CGG | + | chr3.3:77975440-77975459 | None:intergenic | 40.0% | |
| AACATAGGCTAAGAAGCTCA+TGG | + | chr3.3:77976140-77976159 | None:intergenic | 40.0% | |
| AATTAGTGAGTGGTTAGGGT+GGG | - | chr3.3:77978984-77979003 | MS.gene06797:intron | 40.0% | |
| ACATAGGCTAAGAAGCTCAT+GGG | + | chr3.3:77976139-77976158 | None:intergenic | 40.0% | |
| ACTCAACTCCAACTTTCCAA+GGG | + | chr3.3:77976533-77976552 | None:intergenic | 40.0% | |
| AGAGAATCTTCAAGAACAGC+TGG | + | chr3.3:77978596-77978615 | None:intergenic | 40.0% | |
| AGATAGGAAAGCTATAGGGA+AGG | - | chr3.3:77979442-77979461 | MS.gene06797:intron | 40.0% | |
| AGCTCTTGTTAAGGTACATC+AGG | - | chr3.3:77976827-77976846 | MS.gene06797:intron | 40.0% | |
| ATAAGATCCAAGAGCAGCAA+AGG | + | chr3.3:77975463-77975482 | None:intergenic | 40.0% | |
| ATCCTAACTCTAACCGATGT+AGG | + | chr3.3:77975282-77975301 | None:intergenic | 40.0% | |
| ATCTCTAACTTGGTATCCCT+TGG | - | chr3.3:77976514-77976533 | MS.gene06797:intron | 40.0% | |
| ATGCCATTATGCCTTTGAGT+TGG | - | chr3.3:77976088-77976107 | MS.gene06797:intron | 40.0% | |
| ATGCCTGAAAAATCTGATCC+AGG | + | chr3.3:77975384-77975403 | None:intergenic | 40.0% | |
| CACACTAAATAAACGGGAAG+AGG | + | chr3.3:77975534-77975553 | None:intergenic | 40.0% | |
| CATAGAGCTCAGTTGAAATC+TGG | - | chr3.3:77975837-77975856 | MS.gene06797:intron | 40.0% | |
| CCAAAATGAACCCAACTCAA+AGG | + | chr3.3:77976102-77976121 | None:intergenic | 40.0% | |
| CTTATTGAGTGAATCCCATG+TGG | - | chr3.3:77978335-77978354 | MS.gene06797:intron | 40.0% | |
| GAGAATCCAATTGAGGGATA+GGG | + | chr3.3:77975260-77975279 | None:intergenic | 40.0% | |
| GAGAATCTTCAAGAACAGCT+GGG | + | chr3.3:77978595-77978614 | None:intergenic | 40.0% | |
| GAGTGTGAAAGAGTTCCTTA+AGG | - | chr3.3:77976659-77976678 | MS.gene06797:intron | 40.0% | |
| GATGTAGGAGAATCCAATTG+AGG | + | chr3.3:77975267-77975286 | None:intergenic | 40.0% | |
| GGACAGTACATGGACTTTAT+TGG | - | chr3.3:77978549-77978568 | MS.gene06797:CDS | 40.0% | |
| GTAAATATGCAATGTGGGCA+AGG | + | chr3.3:77978273-77978292 | None:intergenic | 40.0% | |
| GTGCAGCTCTTGAAATCAAT+GGG | - | chr3.3:77976594-77976613 | MS.gene06797:intron | 40.0% | |
| TGCTCCATTGATGTTCAATG+AGG | - | chr3.3:77979350-77979369 | MS.gene06797:CDS | 40.0% | |
| TGGGTTGTGGAATTGTTTGT+AGG | - | chr3.3:77975944-77975963 | MS.gene06797:CDS | 40.0% | |
| TTCTAAGTGTGAGACCTACA+TGG | - | chr3.3:77978385-77978404 | MS.gene06797:intron | 40.0% | |
| TTGGTGGGGTTAAGTTATGT+GGG | - | chr3.3:77975925-77975944 | MS.gene06797:CDS | 40.0% | |
| ! | AACCCAACTCAAAGGCATAA+TGG | + | chr3.3:77976094-77976113 | None:intergenic | 40.0% |
| ! | AATCTTTGCGGCTTCTGAAA+TGG | - | chr3.3:77976742-77976761 | MS.gene06797:intron | 40.0% |
| ! | ATAAACGGGAAGAGGAGTAT+CGG | + | chr3.3:77975526-77975545 | None:intergenic | 40.0% |
| ! | ATGGGAAGAGAATTTTGAGC+AGG | - | chr3.3:77977371-77977390 | MS.gene06797:intron | 40.0% |
| ! | CTATTGTCATTGCTGTTGCT+AGG | - | chr3.3:77976036-77976055 | MS.gene06797:CDS | 40.0% |
| ! | GCAAATTGGAAAAGCATGTG+GGG | - | chr3.3:77976013-77976032 | MS.gene06797:CDS | 40.0% |
| ! | GTGCAAATTGGAAAAGCATG+TGG | - | chr3.3:77976011-77976030 | MS.gene06797:CDS | 40.0% |
| ! | TGCCATTATGCCTTTGAGTT+GGG | - | chr3.3:77976089-77976108 | MS.gene06797:intron | 40.0% |
| !! | ATCAATGGGTGTTGATCATG+TGG | - | chr3.3:77976608-77976627 | MS.gene06797:intron | 40.0% |
| !! | ATCTTTGCGGCTTCTGAAAT+GGG | - | chr3.3:77976743-77976762 | MS.gene06797:intron | 40.0% |
| !! | CAACTTTGGAATAGACCCAT+AGG | + | chr3.3:77977778-77977797 | None:intergenic | 40.0% |
| !! | CATTGTTGATTTGCTGACGA+GGG | - | chr3.3:77977227-77977246 | MS.gene06797:intron | 40.0% |
| !! | TAATTGGGAAGGGGTATCAA+GGG | - | chr3.3:77976994-77977013 | MS.gene06797:intron | 40.0% |
| !! | TCATTGTTGATTTGCTGACG+AGG | - | chr3.3:77977226-77977245 | MS.gene06797:intron | 40.0% |
| !! | TTAATTGGGAAGGGGTATCA+AGG | - | chr3.3:77976993-77977012 | MS.gene06797:intron | 40.0% |
| !! | TTAGTGTGTGTTTGGTTCTG+TGG | - | chr3.3:77975546-77975565 | MS.gene06797:intron | 40.0% |
| !!! | CCTTTGAGTTGGGTTCATTT+TGG | - | chr3.3:77976099-77976118 | MS.gene06797:intron | 40.0% |
| !!! | CTGGCATTTTGTTTGGCTTT+TGG | + | chr3.3:77977712-77977731 | None:intergenic | 40.0% |
| !!! | GCAGGCTGTTAGTTTTTTCA+AGG | + | chr3.3:77977569-77977588 | None:intergenic | 40.0% |
| !!! | TGACTGTTGCTTTTGCTGTT+CGG | - | chr3.3:77977091-77977110 | MS.gene06797:intron | 40.0% |
| AATTTGTAGGTTTCGCGTGC+CGG | - | chr3.3:77975746-77975765 | MS.gene06797:intron | 45.0% | |
| ACTGAATACCTAGGTGGGTA+AGG | - | chr3.3:77977980-77977999 | MS.gene06797:CDS | 45.0% | |
| AGAGCAGCAAAGGAACAAAC+AGG | + | chr3.3:77975453-77975472 | None:intergenic | 45.0% | |
| AGCAGTTGCTAAATGTGCTG+CGG | + | chr3.3:77976176-77976195 | None:intergenic | 45.0% | |
| AGCTCAGTTGAAATCTGGTC+AGG | - | chr3.3:77975842-77975861 | MS.gene06797:intron | 45.0% | |
| AGGATCACCAACACGGAAAT+TGG | + | chr3.3:77975433-77975452 | None:intergenic | 45.0% | |
| AGTTACATGGACCCGTAGTA+GGG | - | chr3.3:77977152-77977171 | MS.gene06797:intron | 45.0% | |
| ATAAAGTGGTGAGACCCACA+TGG | + | chr3.3:77978353-77978372 | None:intergenic | 45.0% | |
| ATGAAACTGAGAGCTGAGAC+TGG | - | chr3.3:77977846-77977865 | MS.gene06797:CDS | 45.0% | |
| CACTCAACTCCAACTTTCCA+AGG | + | chr3.3:77976534-77976553 | None:intergenic | 45.0% | |
| CAGAAAATTGGGTGACCCAA+CGG | - | chr3.3:77975188-77975207 | MS.gene06797:intron | 45.0% | |
| CTACTGTCTTGGTTGGCAAA+AGG | - | chr3.3:77978623-77978642 | MS.gene06797:intron | 45.0% | |
| CTTGGTATCCCTTGGAAAGT+TGG | - | chr3.3:77976522-77976541 | MS.gene06797:intron | 45.0% | |
| GAATCACCCTATCCCTCAAT+TGG | - | chr3.3:77975251-77975270 | MS.gene06797:intron | 45.0% | |
| GATCCAGGAATGAATGGCAA+AGG | + | chr3.3:77975369-77975388 | None:intergenic | 45.0% | |
| GCATTTGGCACTTCACATGT+TGG | - | chr3.3:77975807-77975826 | MS.gene06797:intron | 45.0% | |
| GGAGAATCCAATTGAGGGAT+AGG | + | chr3.3:77975261-77975280 | None:intergenic | 45.0% | |
| GGCAACGTGAATGCAAACAT+AGG | + | chr3.3:77976155-77976174 | None:intergenic | 45.0% | |
| GGTGCAGCTCTTGAAATCAA+TGG | - | chr3.3:77976593-77976612 | MS.gene06797:intron | 45.0% | |
| GTCAGCACTAAACCTGAACA+AGG | + | chr3.3:77978894-77978913 | None:intergenic | 45.0% | |
| GTTTGTTCCTTTGCTGCTCT+TGG | - | chr3.3:77975453-77975472 | MS.gene06797:intron | 45.0% | |
| TAAAGTGGTGAGACCCACAT+GGG | + | chr3.3:77978352-77978371 | None:intergenic | 45.0% | |
| TCTTGGGGTTCTATTTGACC+AGG | - | chr3.3:77978957-77978976 | MS.gene06797:intron | 45.0% | |
| TGAAACTGAGAGCTGAGACT+GGG | - | chr3.3:77977847-77977866 | MS.gene06797:CDS | 45.0% | |
| TGGCAGAATTGGACAGTACA+TGG | - | chr3.3:77978539-77978558 | MS.gene06797:intron | 45.0% | |
| TGGGTCTCACCACTTTATGT+GGG | - | chr3.3:77978355-77978374 | MS.gene06797:intron | 45.0% | |
| TTGAGGGATAGGGTGATTCT+TGG | + | chr3.3:77975250-77975269 | None:intergenic | 45.0% | |
| ! | CTCCTACATCGGTTAGAGTT+AGG | - | chr3.3:77975277-77975296 | MS.gene06797:intron | 45.0% |
| ! | GGGTTAAGTTATGTGGGTTG+TGG | - | chr3.3:77975931-77975950 | MS.gene06797:CDS | 45.0% |
| ! | GTTGGTGGGGTTAAGTTATG+TGG | - | chr3.3:77975924-77975943 | MS.gene06797:CDS | 45.0% |
| !! | AATGGGTGTTGATCATGTGG+TGG | - | chr3.3:77976611-77976630 | MS.gene06797:intron | 45.0% |
| !! | CATGTTTACTGGCCTTGTTC+AGG | - | chr3.3:77978879-77978898 | MS.gene06797:intron | 45.0% |
| !! | GCAGATTCTTGGAAAGTACC+AGG | - | chr3.3:77975335-77975354 | MS.gene06797:intron | 45.0% |
| !! | GTTGATCATGTGGTGGACTT+GGG | - | chr3.3:77976618-77976637 | MS.gene06797:intron | 45.0% |
| !! | TCTTTGCGGCTTCTGAAATG+GGG | - | chr3.3:77976744-77976763 | MS.gene06797:intron | 45.0% |
| !! | TGTTGATCATGTGGTGGACT+TGG | - | chr3.3:77976617-77976636 | MS.gene06797:intron | 45.0% |
| !!! | TGGTTTTAGGGGAGCTGAAA+AGG | - | chr3.3:77976572-77976591 | MS.gene06797:intron | 45.0% |
| !! | AAATTTAAACTAAAAAAATA+GGG | + | chr3.3:77979224-77979243 | None:intergenic | 5.0% |
| AGTGGTTAGGGTGGGAAAGT+TGG | - | chr3.3:77978992-77979011 | MS.gene06797:intron | 50.0% | |
| ATGGCAAAGGAGGTTTCTCC+TGG | + | chr3.3:77975356-77975375 | None:intergenic | 50.0% | |
| CAAGGAGCTACTGTCTTGGT+TGG | - | chr3.3:77978616-77978635 | MS.gene06797:CDS | 50.0% | |
| CAGTTACATGGACCCGTAGT+AGG | - | chr3.3:77977151-77977170 | MS.gene06797:intron | 50.0% | |
| CCAGGAATGAATGGCAAAGG+AGG | + | chr3.3:77975366-77975385 | None:intergenic | 50.0% | |
| CCTATCTCTGATGGCAGTGA+AGG | + | chr3.3:77979429-77979448 | None:intergenic | 50.0% | |
| CCTCCTTTGCCATTCATTCC+TGG | - | chr3.3:77975363-77975382 | MS.gene06797:intron | 50.0% | |
| CCTTCACTGCCATCAGAGAT+AGG | - | chr3.3:77979426-77979445 | MS.gene06797:intron | 50.0% | |
| CTCTCAAGGAGCTACTGTCT+TGG | - | chr3.3:77978612-77978631 | MS.gene06797:CDS | 50.0% | |
| GAAACTGAGAGCTGAGACTG+GGG | - | chr3.3:77977848-77977867 | MS.gene06797:CDS | 50.0% | |
| GATGTCCTGTATGACCCAGT+AGG | - | chr3.3:77976702-77976721 | MS.gene06797:intron | 50.0% | |
| GCAACCAAATCACAACCCTC+CGG | + | chr3.3:77975768-77975787 | None:intergenic | 50.0% | |
| GCTATGTTAGCAGGGATGAC+AGG | + | chr3.3:77976810-77976829 | None:intergenic | 50.0% | |
| GGTCTTGCAGCTGTGCAAAT+TGG | - | chr3.3:77975999-77976018 | MS.gene06797:CDS | 50.0% | |
| GTGGGTCTCACCACTTTATG+TGG | - | chr3.3:77978354-77978373 | MS.gene06797:intron | 50.0% | |
| TCATGAGCTTGCCTCCTACT+GGG | + | chr3.3:77976719-77976738 | None:intergenic | 50.0% | |
| TCATTCTTACGGCCTGTCAG+AGG | - | chr3.3:77978667-77978686 | MS.gene06797:intron | 50.0% | |
| TGAGAGAACCTTACCCACCT+AGG | + | chr3.3:77977991-77978010 | None:intergenic | 50.0% | |
| TTCATGAGCTTGCCTCCTAC+TGG | + | chr3.3:77976720-77976739 | None:intergenic | 50.0% | |
| ! | GGGATTTTCTGACCTCTGAC+AGG | + | chr3.3:77978682-77978701 | None:intergenic | 50.0% |
| !! | GGTTGTGATTTGGTTGCTGC+TGG | - | chr3.3:77975771-77975790 | MS.gene06797:intron | 50.0% |
| !! | TCAGGCATCGTTGATTCCGT+TGG | - | chr3.3:77975396-77975415 | MS.gene06797:intron | 50.0% |
| !!! | TTGCTAGTTTTGGGTGCAGC+AGG | - | chr3.3:77975969-77975988 | MS.gene06797:CDS | 50.0% |
| CGTCTTCAACGCTCACCGTT+GGG | + | chr3.3:77975206-77975225 | None:intergenic | 55.0% | |
| GTCCTGTATGACCCAGTAGG+AGG | - | chr3.3:77976705-77976724 | MS.gene06797:intron | 55.0% | |
| TCGTCTTCAACGCTCACCGT+TGG | + | chr3.3:77975207-77975226 | None:intergenic | 55.0% | |
| TGCCTCCTACTGGGTCATAC+AGG | + | chr3.3:77976710-77976729 | None:intergenic | 55.0% | |
| TGGGTCTGCTAGCCCTACTA+CGG | + | chr3.3:77977167-77977186 | None:intergenic | 55.0% | |
| !! | GGAGCACTTGCTGTGGCATT+TGG | - | chr3.3:77975792-77975811 | MS.gene06797:intron | 55.0% |
| !!! | CTAGTTTTGGGTGCAGCAGG+AGG | - | chr3.3:77975972-77975991 | MS.gene06797:CDS | 55.0% |
| CGTGCCGGAGGGTTGTGATT+TGG | - | chr3.3:77975761-77975780 | MS.gene06797:intron | 60.0% | |
| CTCTGATGGCAGTGAAGGCG+AGG | + | chr3.3:77979424-77979443 | None:intergenic | 60.0% | |
| GATGGCAGTGAAGGCGAGGT+TGG | + | chr3.3:77979420-77979439 | None:intergenic | 60.0% | |
| GGGTCTGCTAGCCCTACTAC+GGG | + | chr3.3:77977166-77977185 | None:intergenic | 60.0% | |
| TGTAGGTTTCGCGTGCCGGA+GGG | - | chr3.3:77975750-77975769 | MS.gene06797:intron | 60.0% | |
| TTGTAGGTTTCGCGTGCCGG+AGG | - | chr3.3:77975749-77975768 | MS.gene06797:intron | 60.0% | |
| TTTGGGTGCAGCAGGAGGTG+TGG | - | chr3.3:77975977-77975996 | MS.gene06797:CDS | 60.0% | |
| ! | TGCTGCTGGAGCACTTGCTG+TGG | - | chr3.3:77975785-77975804 | MS.gene06797:intron | 60.0% |
| ! | TTGGGTGCAGCAGGAGGTGT+GGG | - | chr3.3:77975978-77975997 | MS.gene06797:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 77975096 | 77979508 | 77975096 | ID=MS.gene06797 |
| chr3.3 | mRNA | 77975096 | 77979508 | 77975096 | ID=MS.gene06797.t1;Parent=MS.gene06797 |
| chr3.3 | exon | 77979444 | 77979508 | 77979444 | ID=MS.gene06797.t1.exon1;Parent=MS.gene06797.t1 |
| chr3.3 | CDS | 77979444 | 77979508 | 77979444 | ID=cds.MS.gene06797.t1;Parent=MS.gene06797.t1 |
| chr3.3 | exon | 77979090 | 77979413 | 77979090 | ID=MS.gene06797.t1.exon2;Parent=MS.gene06797.t1 |
| chr3.3 | CDS | 77979090 | 77979413 | 77979090 | ID=cds.MS.gene06797.t1;Parent=MS.gene06797.t1 |
| chr3.3 | exon | 77978741 | 77978849 | 77978741 | ID=MS.gene06797.t1.exon3;Parent=MS.gene06797.t1 |
| chr3.3 | CDS | 77978741 | 77978849 | 77978741 | ID=cds.MS.gene06797.t1;Parent=MS.gene06797.t1 |
| chr3.3 | exon | 77978547 | 77978638 | 77978547 | ID=MS.gene06797.t1.exon4;Parent=MS.gene06797.t1 |
| chr3.3 | CDS | 77978547 | 77978638 | 77978547 | ID=cds.MS.gene06797.t1;Parent=MS.gene06797.t1 |
| chr3.3 | exon | 77977765 | 77978023 | 77977765 | ID=MS.gene06797.t1.exon5;Parent=MS.gene06797.t1 |
| chr3.3 | CDS | 77977765 | 77978023 | 77977765 | ID=cds.MS.gene06797.t1;Parent=MS.gene06797.t1 |
| chr3.3 | exon | 77975916 | 77976059 | 77975916 | ID=MS.gene06797.t1.exon6;Parent=MS.gene06797.t1 |
| chr3.3 | CDS | 77975916 | 77976059 | 77975916 | ID=cds.MS.gene06797.t1;Parent=MS.gene06797.t1 |
| chr3.3 | exon | 77975096 | 77975188 | 77975096 | ID=MS.gene06797.t1.exon7;Parent=MS.gene06797.t1 |
| chr3.3 | CDS | 77975096 | 77975188 | 77975096 | ID=cds.MS.gene06797.t1;Parent=MS.gene06797.t1 |
| Gene Sequence |
| Protein sequence |
