Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068274.t1 | XP_024637728.1 | 91.8 | 546 | 28 | 4 | 1 | 532 | 56 | 598 | 4.90E-276 | 959.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068274.t1 | Q8H151 | 63.5 | 559 | 162 | 8 | 1 | 532 | 65 | 608 | 4.6e-190 | 665.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068274.t1 | A0A072UI68 | 89.4 | 538 | 15 | 2 | 1 | 532 | 56 | 557 | 2.4e-264 | 920.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052937 | MS.gene068274 | 0.82355 | 1.30E-53 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068274.t1 | MTR_4g013210 | 89.405 | 538 | 15 | 2 | 1 | 532 | 56 | 557 | 0.0 | 966 |
MS.gene068274.t1 | MTR_4g013210 | 91.068 | 515 | 29 | 4 | 1 | 501 | 56 | 567 | 0.0 | 944 |
MS.gene068274.t1 | MTR_4g011790 | 82.103 | 542 | 83 | 5 | 1 | 532 | 62 | 599 | 0.0 | 901 |
MS.gene068274.t1 | MTR_4g011790 | 80.692 | 549 | 87 | 4 | 1 | 532 | 62 | 608 | 0.0 | 900 |
MS.gene068274.t1 | MTR_4g011790 | 82.453 | 530 | 79 | 5 | 1 | 520 | 62 | 587 | 0.0 | 885 |
MS.gene068274.t1 | MTR_4g013210 | 90.244 | 451 | 23 | 4 | 98 | 532 | 1 | 446 | 0.0 | 817 |
MS.gene068274.t1 | MTR_4g013210 | 88.789 | 446 | 14 | 1 | 1 | 446 | 56 | 465 | 0.0 | 800 |
MS.gene068274.t1 | MTR_4g013210 | 87.755 | 441 | 12 | 2 | 98 | 532 | 1 | 405 | 0.0 | 776 |
MS.gene068274.t1 | MTR_4g013210 | 90.274 | 401 | 24 | 3 | 1 | 391 | 56 | 451 | 0.0 | 733 |
MS.gene068274.t1 | MTR_3g035130 | 26.886 | 517 | 330 | 16 | 28 | 531 | 33 | 514 | 7.85e-45 | 166 |
MS.gene068274.t1 | MTR_3g035130 | 26.940 | 464 | 295 | 15 | 22 | 472 | 27 | 459 | 6.78e-35 | 137 |
MS.gene068274.t1 | MTR_4g077900 | 27.822 | 381 | 237 | 12 | 166 | 531 | 120 | 477 | 1.31e-32 | 130 |
MS.gene068274.t1 | MTR_5g027500 | 28.497 | 386 | 228 | 11 | 166 | 531 | 210 | 567 | 4.15e-32 | 130 |
MS.gene068274.t1 | MTR_1569s0010 | 24.713 | 522 | 311 | 17 | 51 | 525 | 42 | 528 | 2.53e-31 | 127 |
MS.gene068274.t1 | MTR_4g057730 | 27.371 | 369 | 234 | 10 | 167 | 524 | 189 | 534 | 3.46e-31 | 127 |
MS.gene068274.t1 | MTR_1g026310 | 26.943 | 386 | 241 | 13 | 162 | 531 | 199 | 559 | 4.88e-30 | 124 |
MS.gene068274.t1 | MTR_0803s0020 | 23.848 | 499 | 324 | 14 | 55 | 532 | 285 | 748 | 1.16e-29 | 124 |
MS.gene068274.t1 | MTR_1g063120 | 25.815 | 368 | 251 | 10 | 164 | 524 | 192 | 544 | 1.38e-29 | 122 |
MS.gene068274.t1 | MTR_5g027480 | 27.937 | 383 | 234 | 13 | 166 | 531 | 197 | 554 | 5.75e-29 | 120 |
MS.gene068274.t1 | MTR_1g063110 | 24.872 | 390 | 265 | 11 | 142 | 524 | 172 | 540 | 6.49e-29 | 120 |
MS.gene068274.t1 | MTR_4g128337 | 24.364 | 550 | 345 | 20 | 4 | 524 | 33 | 540 | 6.22e-28 | 117 |
MS.gene068274.t1 | MTR_7g084850 | 26.835 | 395 | 235 | 18 | 165 | 532 | 356 | 723 | 1.15e-27 | 118 |
MS.gene068274.t1 | MTR_2g105570 | 23.596 | 534 | 342 | 19 | 25 | 530 | 52 | 547 | 1.25e-27 | 117 |
MS.gene068274.t1 | MTR_2g095510 | 25.323 | 387 | 231 | 11 | 161 | 524 | 180 | 531 | 2.44e-27 | 115 |
MS.gene068274.t1 | MTR_3g064420 | 26.463 | 393 | 220 | 14 | 168 | 525 | 189 | 547 | 1.40e-26 | 114 |
MS.gene068274.t1 | MTR_1g073180 | 26.234 | 385 | 234 | 14 | 162 | 528 | 179 | 531 | 2.73e-26 | 112 |
MS.gene068274.t1 | MTR_8g039720 | 26.316 | 380 | 242 | 11 | 164 | 531 | 205 | 558 | 2.95e-26 | 112 |
MS.gene068274.t1 | MTR_3g088880 | 23.387 | 496 | 317 | 14 | 52 | 527 | 99 | 551 | 1.54e-25 | 110 |
MS.gene068274.t1 | MTR_4g005750 | 23.384 | 526 | 343 | 18 | 27 | 530 | 53 | 540 | 4.87e-25 | 109 |
MS.gene068274.t1 | MTR_5g007640 | 23.049 | 551 | 347 | 21 | 11 | 530 | 81 | 585 | 1.35e-24 | 108 |
MS.gene068274.t1 | MTR_1g104810 | 27.679 | 336 | 186 | 7 | 166 | 457 | 191 | 513 | 1.67e-24 | 107 |
MS.gene068274.t1 | MTR_1g104810 | 27.679 | 336 | 186 | 7 | 166 | 457 | 258 | 580 | 2.11e-24 | 107 |
MS.gene068274.t1 | MTR_2g030240 | 25.679 | 405 | 232 | 16 | 169 | 531 | 75 | 452 | 8.19e-24 | 104 |
MS.gene068274.t1 | MTR_3g088870 | 24.936 | 393 | 241 | 13 | 158 | 527 | 192 | 553 | 9.22e-24 | 105 |
MS.gene068274.t1 | MTR_2g030240 | 26.173 | 405 | 230 | 17 | 169 | 531 | 169 | 546 | 1.22e-23 | 105 |
MS.gene068274.t1 | MTR_1g090737 | 27.005 | 374 | 230 | 12 | 167 | 524 | 212 | 558 | 2.21e-23 | 104 |
MS.gene068274.t1 | MTR_5g076220 | 26.276 | 392 | 229 | 14 | 164 | 527 | 185 | 544 | 2.68e-22 | 100 |
MS.gene068274.t1 | MTR_5g076240 | 26.420 | 405 | 233 | 13 | 153 | 527 | 174 | 543 | 5.25e-22 | 100 |
MS.gene068274.t1 | MTR_5g076200 | 25.191 | 393 | 232 | 11 | 164 | 527 | 185 | 544 | 7.35e-22 | 99.8 |
MS.gene068274.t1 | MTR_0161s0050 | 25.195 | 385 | 236 | 13 | 167 | 527 | 190 | 546 | 4.01e-21 | 97.4 |
MS.gene068274.t1 | MTR_3g460770 | 24.267 | 375 | 247 | 12 | 166 | 526 | 184 | 535 | 4.55e-21 | 97.1 |
MS.gene068274.t1 | MTR_4g057730 | 26.578 | 301 | 191 | 9 | 167 | 456 | 189 | 470 | 1.61e-20 | 94.7 |
MS.gene068274.t1 | MTR_1g073180 | 25.000 | 356 | 218 | 13 | 162 | 500 | 201 | 524 | 2.71e-19 | 91.7 |
MS.gene068274.t1 | MTR_1054s0020 | 30.627 | 271 | 170 | 7 | 268 | 526 | 502 | 766 | 3.51e-19 | 91.7 |
MS.gene068274.t1 | MTR_8g035620 | 23.062 | 503 | 324 | 17 | 58 | 524 | 146 | 621 | 4.40e-19 | 91.7 |
MS.gene068274.t1 | MTR_8g074040 | 25.815 | 399 | 219 | 16 | 163 | 526 | 104 | 460 | 6.88e-19 | 90.1 |
MS.gene068274.t1 | MTR_8g074040 | 25.815 | 399 | 219 | 16 | 163 | 526 | 222 | 578 | 1.05e-18 | 90.1 |
MS.gene068274.t1 | MTR_1g034360 | 22.851 | 477 | 296 | 14 | 55 | 474 | 103 | 564 | 2.42e-18 | 89.0 |
MS.gene068274.t1 | MTR_2g044180 | 23.327 | 553 | 324 | 22 | 27 | 525 | 46 | 552 | 1.65e-17 | 85.9 |
MS.gene068274.t1 | MTR_5g008800 | 26.410 | 390 | 220 | 16 | 167 | 526 | 182 | 534 | 2.66e-17 | 85.5 |
MS.gene068274.t1 | MTR_5g009350 | 23.404 | 470 | 289 | 15 | 45 | 455 | 92 | 549 | 4.45e-17 | 84.7 |
MS.gene068274.t1 | MTR_5g009350 | 23.695 | 498 | 301 | 17 | 45 | 483 | 92 | 569 | 4.55e-17 | 84.7 |
MS.gene068274.t1 | MTR_5g009350 | 23.695 | 498 | 301 | 17 | 45 | 483 | 92 | 569 | 4.73e-17 | 84.7 |
MS.gene068274.t1 | MTR_2g044180 | 32.903 | 155 | 98 | 5 | 373 | 525 | 311 | 461 | 5.02e-17 | 84.3 |
MS.gene068274.t1 | MTR_8g074120 | 24.112 | 394 | 232 | 14 | 163 | 526 | 133 | 489 | 5.95e-17 | 84.0 |
MS.gene068274.t1 | MTR_5g009350 | 23.313 | 489 | 294 | 16 | 45 | 464 | 92 | 568 | 1.13e-16 | 83.6 |
MS.gene068274.t1 | MTR_4g057730 | 26.761 | 284 | 178 | 9 | 167 | 439 | 189 | 453 | 3.09e-16 | 81.6 |
MS.gene068274.t1 | MTR_4g121600 | 22.325 | 542 | 347 | 21 | 25 | 525 | 44 | 552 | 5.10e-16 | 81.3 |
MS.gene068274.t1 | MTR_1g030290 | 21.961 | 510 | 307 | 14 | 57 | 499 | 134 | 619 | 1.70e-15 | 80.1 |
MS.gene068274.t1 | MTR_8g083170 | 23.218 | 547 | 301 | 20 | 57 | 501 | 135 | 664 | 2.32e-15 | 79.7 |
MS.gene068274.t1 | MTR_5g008820 | 29.870 | 154 | 99 | 5 | 373 | 525 | 386 | 531 | 1.04e-12 | 70.9 |
MS.gene068274.t1 | MTR_3g084470 | 24.627 | 268 | 151 | 10 | 300 | 529 | 450 | 704 | 1.52e-11 | 67.4 |
MS.gene068274.t1 | MTR_3g084450 | 28.019 | 207 | 131 | 5 | 300 | 494 | 454 | 654 | 1.66e-11 | 67.4 |
MS.gene068274.t1 | MTR_3g084450 | 28.019 | 207 | 131 | 5 | 300 | 494 | 246 | 446 | 1.92e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068274.t1 | AT3G16170 | 63.506 | 559 | 162 | 8 | 1 | 532 | 65 | 608 | 0.0 | 697 |
MS.gene068274.t1 | AT3G48990 | 27.879 | 495 | 310 | 14 | 40 | 522 | 45 | 504 | 3.24e-52 | 186 |
MS.gene068274.t1 | AT4G19010 | 27.882 | 373 | 243 | 10 | 167 | 530 | 205 | 560 | 2.08e-36 | 142 |
MS.gene068274.t1 | AT1G20510 | 27.577 | 388 | 235 | 11 | 162 | 531 | 184 | 543 | 2.49e-35 | 139 |
MS.gene068274.t1 | AT1G20480 | 27.297 | 381 | 242 | 11 | 162 | 531 | 208 | 564 | 2.55e-32 | 131 |
MS.gene068274.t1 | AT4G05160 | 25.858 | 379 | 239 | 11 | 161 | 524 | 185 | 536 | 1.10e-30 | 126 |
MS.gene068274.t1 | AT1G20500 | 27.297 | 381 | 243 | 12 | 162 | 531 | 192 | 549 | 5.63e-30 | 124 |
MS.gene068274.t1 | AT1G30520 | 25.461 | 542 | 307 | 20 | 48 | 531 | 50 | 552 | 9.05e-30 | 123 |
MS.gene068274.t1 | AT1G30520 | 25.461 | 542 | 307 | 20 | 48 | 531 | 50 | 552 | 9.05e-30 | 123 |
MS.gene068274.t1 | AT5G38120 | 29.243 | 383 | 220 | 13 | 167 | 531 | 200 | 549 | 2.71e-29 | 122 |
MS.gene068274.t1 | AT1G65060 | 23.352 | 531 | 338 | 14 | 25 | 529 | 74 | 561 | 3.90e-29 | 121 |
MS.gene068274.t1 | AT5G36880 | 26.700 | 397 | 233 | 16 | 165 | 532 | 301 | 668 | 4.52e-29 | 122 |
MS.gene068274.t1 | AT5G36880 | 26.700 | 397 | 233 | 16 | 165 | 532 | 301 | 668 | 4.52e-29 | 122 |
MS.gene068274.t1 | AT5G36880 | 26.700 | 397 | 233 | 16 | 165 | 532 | 301 | 668 | 4.52e-29 | 122 |
MS.gene068274.t1 | AT5G36880 | 26.700 | 397 | 233 | 16 | 165 | 532 | 301 | 668 | 4.52e-29 | 122 |
MS.gene068274.t1 | AT3G21240 | 26.804 | 388 | 235 | 14 | 164 | 530 | 193 | 552 | 5.63e-29 | 121 |
MS.gene068274.t1 | AT5G36880 | 26.952 | 397 | 232 | 16 | 165 | 532 | 351 | 718 | 6.39e-29 | 122 |
MS.gene068274.t1 | AT1G77240 | 26.429 | 420 | 234 | 16 | 153 | 530 | 157 | 543 | 3.44e-26 | 112 |
MS.gene068274.t1 | AT1G21540 | 25.130 | 386 | 240 | 9 | 168 | 530 | 189 | 548 | 9.61e-26 | 111 |
MS.gene068274.t1 | AT5G63380 | 25.907 | 386 | 236 | 14 | 161 | 527 | 199 | 553 | 1.77e-25 | 110 |
MS.gene068274.t1 | AT1G66120 | 27.342 | 395 | 224 | 13 | 163 | 527 | 183 | 544 | 1.96e-25 | 110 |
MS.gene068274.t1 | AT1G68270 | 25.538 | 372 | 237 | 8 | 163 | 527 | 183 | 521 | 2.23e-25 | 110 |
MS.gene068274.t1 | AT1G21530 | 26.546 | 388 | 226 | 12 | 168 | 527 | 186 | 542 | 4.16e-25 | 109 |
MS.gene068274.t1 | AT1G21530 | 25.195 | 385 | 237 | 10 | 168 | 527 | 186 | 544 | 5.05e-25 | 109 |
MS.gene068274.t1 | AT1G51680 | 24.872 | 390 | 252 | 11 | 158 | 530 | 194 | 559 | 5.26e-25 | 109 |
MS.gene068274.t1 | AT1G20510 | 27.157 | 313 | 186 | 10 | 162 | 456 | 184 | 472 | 6.40e-25 | 108 |
MS.gene068274.t1 | AT1G65890 | 26.250 | 400 | 229 | 13 | 163 | 527 | 183 | 551 | 4.56e-24 | 106 |
MS.gene068274.t1 | AT1G49430 | 24.517 | 518 | 310 | 16 | 20 | 474 | 68 | 567 | 4.97e-24 | 106 |
MS.gene068274.t1 | AT5G36880 | 27.414 | 321 | 187 | 13 | 165 | 461 | 301 | 599 | 5.36e-24 | 106 |
MS.gene068274.t1 | AT5G38120 | 28.746 | 327 | 190 | 12 | 167 | 476 | 200 | 500 | 8.24e-24 | 105 |
MS.gene068274.t1 | AT1G65880 | 25.062 | 403 | 231 | 13 | 163 | 527 | 183 | 552 | 1.04e-22 | 102 |
MS.gene068274.t1 | AT5G27600 | 28.743 | 334 | 185 | 8 | 166 | 457 | 261 | 583 | 2.98e-22 | 101 |
MS.gene068274.t1 | AT5G16340 | 29.367 | 395 | 211 | 18 | 164 | 527 | 183 | 540 | 3.57e-22 | 100 |
MS.gene068274.t1 | AT3G05970 | 28.869 | 336 | 182 | 8 | 166 | 457 | 261 | 583 | 7.55e-22 | 100 |
MS.gene068274.t1 | AT3G21230 | 24.156 | 385 | 238 | 13 | 164 | 525 | 208 | 561 | 8.47e-22 | 99.4 |
MS.gene068274.t1 | AT1G62940 | 27.865 | 384 | 217 | 15 | 173 | 529 | 188 | 538 | 8.75e-22 | 99.4 |
MS.gene068274.t1 | AT1G49430 | 25.166 | 453 | 261 | 14 | 20 | 409 | 68 | 505 | 2.46e-21 | 97.8 |
MS.gene068274.t1 | AT5G16370 | 27.488 | 422 | 243 | 19 | 133 | 527 | 155 | 540 | 3.59e-21 | 97.4 |
MS.gene068274.t1 | AT5G38120 | 28.525 | 305 | 177 | 11 | 167 | 456 | 200 | 478 | 4.13e-21 | 96.7 |
MS.gene068274.t1 | AT5G38120 | 28.525 | 305 | 177 | 11 | 167 | 456 | 200 | 478 | 4.13e-21 | 96.7 |
MS.gene068274.t1 | AT1G75960 | 27.342 | 395 | 220 | 16 | 164 | 527 | 182 | 540 | 1.80e-20 | 95.1 |
MS.gene068274.t1 | AT1G20560 | 23.562 | 539 | 349 | 18 | 18 | 525 | 33 | 539 | 1.83e-20 | 95.1 |
MS.gene068274.t1 | AT3G21240 | 27.302 | 315 | 184 | 13 | 164 | 457 | 193 | 483 | 4.00e-20 | 94.0 |
MS.gene068274.t1 | AT3G21240 | 27.302 | 315 | 184 | 13 | 164 | 457 | 193 | 483 | 4.00e-20 | 94.0 |
MS.gene068274.t1 | AT1G65060 | 23.982 | 442 | 263 | 14 | 25 | 436 | 74 | 472 | 4.56e-20 | 93.6 |
MS.gene068274.t1 | AT1G20510 | 27.397 | 292 | 170 | 10 | 162 | 435 | 184 | 451 | 8.14e-20 | 92.8 |
MS.gene068274.t1 | AT1G51680 | 25.148 | 338 | 216 | 10 | 158 | 478 | 194 | 511 | 1.05e-19 | 92.8 |
MS.gene068274.t1 | AT2G17650 | 27.157 | 394 | 221 | 16 | 163 | 526 | 238 | 595 | 1.22e-19 | 92.8 |
MS.gene068274.t1 | AT1G20560 | 24.174 | 484 | 308 | 17 | 73 | 525 | 6 | 461 | 3.58e-19 | 90.9 |
MS.gene068274.t1 | AT3G16910 | 23.551 | 552 | 329 | 21 | 25 | 525 | 46 | 555 | 1.55e-18 | 89.4 |
MS.gene068274.t1 | AT3G21230 | 25.680 | 331 | 196 | 12 | 164 | 471 | 208 | 511 | 1.59e-18 | 89.4 |
MS.gene068274.t1 | AT1G64400 | 23.033 | 521 | 307 | 18 | 22 | 473 | 70 | 565 | 3.41e-18 | 88.6 |
MS.gene068274.t1 | AT3G21230 | 26.266 | 316 | 183 | 12 | 164 | 456 | 208 | 496 | 4.28e-18 | 87.8 |
MS.gene068274.t1 | AT3G23790 | 23.583 | 547 | 303 | 21 | 26 | 476 | 110 | 637 | 5.73e-17 | 84.7 |
MS.gene068274.t1 | AT1G30520 | 27.723 | 303 | 168 | 12 | 158 | 432 | 164 | 443 | 6.76e-17 | 84.0 |
MS.gene068274.t1 | AT1G30520 | 27.723 | 303 | 168 | 12 | 158 | 432 | 164 | 443 | 6.76e-17 | 84.0 |
MS.gene068274.t1 | AT1G51680 | 24.921 | 317 | 201 | 10 | 158 | 457 | 194 | 490 | 7.24e-17 | 84.0 |
MS.gene068274.t1 | AT2G47240 | 22.763 | 514 | 309 | 18 | 42 | 494 | 28 | 514 | 1.46e-13 | 73.9 |
MS.gene068274.t1 | AT2G47240 | 22.763 | 514 | 309 | 18 | 42 | 494 | 87 | 573 | 1.78e-13 | 73.6 |
MS.gene068274.t1 | AT2G47240 | 22.763 | 514 | 309 | 18 | 42 | 494 | 87 | 573 | 1.78e-13 | 73.6 |
MS.gene068274.t1 | AT2G47240 | 22.763 | 514 | 309 | 18 | 42 | 494 | 87 | 573 | 1.78e-13 | 73.6 |
MS.gene068274.t1 | AT5G35930 | 22.868 | 516 | 307 | 20 | 58 | 527 | 5 | 475 | 2.63e-12 | 70.1 |
MS.gene068274.t1 | AT5G35930 | 22.868 | 516 | 307 | 20 | 58 | 527 | 97 | 567 | 2.66e-12 | 70.1 |
MS.gene068274.t1 | AT4G14070 | 25.943 | 212 | 139 | 4 | 300 | 494 | 471 | 681 | 1.07e-11 | 68.2 |
MS.gene068274.t1 | AT1G20490 | 25.735 | 272 | 167 | 11 | 162 | 419 | 194 | 444 | 1.54e-11 | 67.0 |
MS.gene068274.t1 | AT1G20490 | 25.735 | 272 | 167 | 11 | 162 | 419 | 194 | 444 | 1.54e-11 | 67.0 |
Find 126 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTCTTCTCTAACGACTTAT+TGG | 0.194762 | 4.4:+87018343 | None:intergenic |
CATCATTGTTTAAAGAATAT+TGG | 0.213595 | 4.4:-87016130 | MS.gene068274:CDS |
ATTCCGCTGACACTAAATTT+TGG | 0.236074 | 4.4:+87017382 | None:intergenic |
AATTTAGTGTCAGCGGAATT+TGG | 0.256272 | 4.4:-87017378 | MS.gene068274:CDS |
CATCACTGGCCATCGTTTAT+TGG | 0.264377 | 4.4:-87016636 | MS.gene068274:CDS |
CACGGTAACCTTGTATTAAT+CGG | 0.269004 | 4.4:+87017006 | None:intergenic |
CCCAAGTGGATAACTCTTCT+AGG | 0.269417 | 4.4:+87013567 | None:intergenic |
GCTTCCCATTCTTGCATAAC+AGG | 0.270248 | 4.4:+87016659 | None:intergenic |
GTAAGGTGCAAGTTTATCTT+TGG | 0.297335 | 4.4:+87013544 | None:intergenic |
GCATTGTCAAATCCATTAAA+AGG | 0.298576 | 4.4:-87016497 | MS.gene068274:CDS |
GAATTTGTTGCTGCTGTACT+TGG | 0.306477 | 4.4:-87018893 | MS.gene068274:CDS |
TTTGACTCTTCATCAGCTTC+TGG | 0.308228 | 4.4:+87013602 | None:intergenic |
TACCAACTCGTCTGATCCTT+TGG | 0.314071 | 4.4:-87012458 | MS.gene068274:CDS |
TTGATCTTTCAATGGTTTCC+AGG | 0.320902 | 4.4:+87018273 | None:intergenic |
CATCGTTTATTGGAGCGATA+TGG | 0.337894 | 4.4:-87016626 | MS.gene068274:CDS |
AACAAATTCAGCAGAGGGTT+TGG | 0.342190 | 4.4:+87018907 | None:intergenic |
GTCTCAGAATGTTGTGTCTT+GGG | 0.343760 | 4.4:-87013671 | MS.gene068274:CDS |
GGCTTACCACACAAAGAATA+TGG | 0.348017 | 4.4:-87013650 | MS.gene068274:CDS |
GATGGATATTACATCATTCT+AGG | 0.360406 | 4.4:-87014254 | MS.gene068274:CDS |
CAATATTCTTTAAACAATGA+TGG | 0.361902 | 4.4:+87016131 | None:intergenic |
CTCAACCTGTTATGCAAGAA+TGG | 0.387119 | 4.4:-87016664 | MS.gene068274:CDS |
TTGCTGCTGTACTTGGGACT+TGG | 0.387636 | 4.4:-87018886 | MS.gene068274:CDS |
TATTTCCATGTAGGTAACTA+AGG | 0.390753 | 4.4:-87014333 | MS.gene068274:intron |
TTACATGCAAATTATTTCTT+CGG | 0.391512 | 4.4:-87019926 | MS.gene068274:CDS |
GAATCTCATTGTATTGTTGA+AGG | 0.399613 | 4.4:-87017416 | MS.gene068274:CDS |
ATATCCAACTGAAGGATCTA+AGG | 0.400947 | 4.4:-87017338 | MS.gene068274:CDS |
GTACTTGGGACTTGGCTTAG+TGG | 0.407283 | 4.4:-87018878 | MS.gene068274:CDS |
GGTAACTAAGGAATCATTTA+CGG | 0.408234 | 4.4:-87014321 | MS.gene068274:CDS |
TGCAAGGAACTTGCGTCTAA+TGG | 0.425487 | 4.4:-87016946 | MS.gene068274:intron |
ACCAAAACCTAGGGAAATCT+TGG | 0.427393 | 4.4:-87018953 | MS.gene068274:intron |
TGTCTCAGAATGTTGTGTCT+TGG | 0.427969 | 4.4:-87013672 | MS.gene068274:CDS |
CCTGTATGTGATGAATAATT+CGG | 0.428694 | 4.4:-87018810 | MS.gene068274:intron |
TATCATACTTGATCTTTCAA+TGG | 0.428840 | 4.4:+87018265 | None:intergenic |
AAAGAATATGGAGAAATTGT+TGG | 0.453282 | 4.4:-87013638 | MS.gene068274:CDS |
CCATGTCACCATACCTTGTA+AGG | 0.457324 | 4.4:+87013527 | None:intergenic |
ATCTGTTGTAACTGCATCTC+CGG | 0.459657 | 4.4:+87014280 | None:intergenic |
ATTAATCGGGCATACATAGT+TGG | 0.466685 | 4.4:+87017020 | None:intergenic |
TCTAACGACTTATTGGCAAC+AGG | 0.467126 | 4.4:+87018350 | None:intergenic |
TTGTACACTAGCGGAACAAC+AGG | 0.468770 | 4.4:-87018122 | MS.gene068274:CDS |
AATATTCTTTAAACAATGAT+GGG | 0.471095 | 4.4:+87016132 | None:intergenic |
ACATACAGGAGCTCTACTTC+TGG | 0.472249 | 4.4:+87018824 | None:intergenic |
CTAACCTGCACTCCGGGTAA+TGG | 0.477390 | 4.4:+87016446 | None:intergenic |
ACGGTAACCTTGTATTAATC+GGG | 0.478750 | 4.4:+87017007 | None:intergenic |
ACCAACTCGTCTGATCCTTT+GGG | 0.478839 | 4.4:-87012457 | MS.gene068274:CDS |
TGTGTATGAACAACTCCCTT+AGG | 0.479091 | 4.4:+87018095 | None:intergenic |
AGATAAACTTGCACCTTACA+AGG | 0.483125 | 4.4:-87013540 | MS.gene068274:intron |
CTTTCTCTTAGGTCAAGATC+CGG | 0.483958 | 4.4:-87018153 | MS.gene068274:intron |
TCACTCCCTCGCAATGCAAT+GGG | 0.485005 | 4.4:-87012432 | MS.gene068274:CDS |
AATCGAATCAGTTATAATAG+AGG | 0.487731 | 4.4:-87013819 | MS.gene068274:intron |
GAGCGTAAGGCAGGCACAGT+TGG | 0.488137 | 4.4:-87016473 | MS.gene068274:CDS |
AATCTTGGTGGAGCTCGAAT+AGG | 0.490823 | 4.4:-87018938 | MS.gene068274:CDS |
CATTCTTGCATAACAGGTTG+AGG | 0.493045 | 4.4:+87016665 | None:intergenic |
GCTGACACAGCTTGTAGCTC+AGG | 0.495695 | 4.4:+87016975 | None:intergenic |
AATATATCTAATCTCTTATG+TGG | 0.502207 | 4.4:-87019898 | MS.gene068274:CDS |
GATGCTATAACTGTATTCAC+TGG | 0.503554 | 4.4:-87017310 | MS.gene068274:CDS |
ATCAATGTTCTAGTTTGTCA+TGG | 0.503981 | 4.4:-87016519 | MS.gene068274:intron |
CCGAATTATTCATCACATAC+AGG | 0.507169 | 4.4:+87018810 | None:intergenic |
CATCAACTAACCTGCACTCC+GGG | 0.507644 | 4.4:+87016440 | None:intergenic |
TCAACCTGTTATGCAAGAAT+GGG | 0.508086 | 4.4:-87016663 | MS.gene068274:CDS |
CTCACTCCCTCGCAATGCAA+TGG | 0.508145 | 4.4:-87012433 | MS.gene068274:CDS |
CAAGAATGGGAAGCCATCAC+TGG | 0.508526 | 4.4:-87016650 | MS.gene068274:CDS |
AATTTGTTGCTGCTGTACTT+GGG | 0.510580 | 4.4:-87018892 | MS.gene068274:CDS |
CTCTGATAGCAACATTTCCA+TGG | 0.513615 | 4.4:+87019968 | None:intergenic |
AAGGAATCATTTACGGAAGA+CGG | 0.515834 | 4.4:-87014314 | MS.gene068274:CDS |
AAAACCATTACCCGGAGTGC+AGG | 0.524416 | 4.4:-87016450 | MS.gene068274:intron |
TTAAAAGGTGAGCGTAAGGC+AGG | 0.525924 | 4.4:-87016482 | MS.gene068274:CDS |
TATTGGCAACAGGTGGAAGA+TGG | 0.526160 | 4.4:+87018360 | None:intergenic |
CGGAACAACAGGTAAACCTA+AGG | 0.528875 | 4.4:-87018111 | MS.gene068274:CDS |
AACTCTTCTAGGCTTAGAGC+CGG | 0.531743 | 4.4:+87013578 | None:intergenic |
GCAGTTACAACAGATAAAGA+TGG | 0.535005 | 4.4:-87014272 | MS.gene068274:CDS |
TCCATTAAAAGGTGAGCGTA+AGG | 0.537596 | 4.4:-87016486 | MS.gene068274:CDS |
AAGCAAGACCTTGCATCCCA+TGG | 0.541759 | 4.4:-87019985 | MS.gene068274:CDS |
ACACAACATTCTGAGACAGC+TGG | 0.542670 | 4.4:+87013677 | None:intergenic |
CAACATTTCCATGGGATGCA+AGG | 0.549065 | 4.4:+87019977 | None:intergenic |
CATGCTATTATTCAGATGTG+TGG | 0.551989 | 4.4:-87016701 | MS.gene068274:intron |
GAATACAGTTATAGCATCAT+CGG | 0.552682 | 4.4:+87017315 | None:intergenic |
TCGGCCTTAGATCCTTCAGT+TGG | 0.554813 | 4.4:+87017334 | None:intergenic |
ATTTCTCCATATTCTTTGTG+TGG | 0.557741 | 4.4:+87013644 | None:intergenic |
AAAACCTAGGGAAATCTTGG+TGG | 0.558124 | 4.4:-87018950 | MS.gene068274:intron |
TCAGCGGAATTTGGAAGAGA+TGG | 0.559886 | 4.4:-87017369 | MS.gene068274:CDS |
ATGCTATTATTCAGATGTGT+GGG | 0.560738 | 4.4:-87016700 | MS.gene068274:intron |
ACCTTTCCCATTGCATTGCG+AGG | 0.560840 | 4.4:+87012426 | None:intergenic |
TTGCCAAAATTTAGTGTCAG+CGG | 0.562865 | 4.4:-87017385 | MS.gene068274:CDS |
CCTTTCCCATTGCATTGCGA+GGG | 0.563073 | 4.4:+87012427 | None:intergenic |
ACACGGAAGCATCATTGCTC+AGG | 0.564348 | 4.4:-87018075 | MS.gene068274:intron |
TTCTTGCAGATGAGGAGCGT+GGG | 0.565509 | 4.4:-87016193 | MS.gene068274:CDS |
AGCTGATGAAGAGTCAAAGC+CGG | 0.566250 | 4.4:-87013597 | MS.gene068274:CDS |
AATACAAGGTTACCGTGCAA+TGG | 0.566321 | 4.4:-87017000 | MS.gene068274:CDS |
GGTCAAGATTCTTGCAGATG+AGG | 0.566623 | 4.4:-87016201 | MS.gene068274:CDS |
TCTGGATAGCTGACTGCAAG+TGG | 0.569089 | 4.4:+87018842 | None:intergenic |
CCCTCGCAATGCAATGGGAA+AGG | 0.573456 | 4.4:-87012427 | MS.gene068274:intron |
GAAGACGGTTTCTTTAAGAC+CGG | 0.574308 | 4.4:-87014299 | MS.gene068274:CDS |
TGCAGATGAGGAGCGTGGGA+AGG | 0.574332 | 4.4:-87016189 | MS.gene068274:CDS |
CTAGTGTACAAAATGAGTGC+CGG | 0.578770 | 4.4:+87018134 | None:intergenic |
CTGTGTCAGCATCTGCTGCA+AGG | 0.579150 | 4.4:-87016962 | MS.gene068274:CDS |
TGCAGACAGCTTATAGCCAC+CGG | 0.580145 | 4.4:+87013847 | None:intergenic |
TACTAGTGCGGACATCATCA+AGG | 0.581799 | 4.4:-87013870 | MS.gene068274:CDS |
CAATAAACGATGGCCAGTGA+TGG | 0.587180 | 4.4:+87016637 | None:intergenic |
AGAGATGAACATTCACAGAA+TGG | 0.588910 | 4.4:-87018320 | MS.gene068274:CDS |
GCCTAGAAGAGTTATCCACT+TGG | 0.591146 | 4.4:-87013568 | MS.gene068274:CDS |
TCCCAAAGGATCAGACGAGT+TGG | 0.594683 | 4.4:+87012456 | None:intergenic |
ACATCAACTAACCTGCACTC+CGG | 0.602640 | 4.4:+87016439 | None:intergenic |
AAGTTTATCTTTGGCCCAAG+TGG | 0.603463 | 4.4:+87013553 | None:intergenic |
GCAGCAACAAATTCAGCAGA+GGG | 0.603569 | 4.4:+87018902 | None:intergenic |
TCCAATCCTTGACAAAAGCG+TGG | 0.604797 | 4.4:-87017785 | MS.gene068274:CDS |
CGTGAGTCATATCCAACTGA+AGG | 0.605168 | 4.4:-87017346 | MS.gene068274:CDS |
TGCGAGGGAGTGAGTCCCAA+AGG | 0.606925 | 4.4:+87012442 | None:intergenic |
TCTGATAGCAACATTTCCAT+GGG | 0.607586 | 4.4:+87019969 | None:intergenic |
AGTGCGGACATCATCAAGGC+CGG | 0.613064 | 4.4:-87013866 | MS.gene068274:CDS |
CCAATCCTTGACAAAAGCGT+GGG | 0.616229 | 4.4:-87017784 | MS.gene068274:CDS |
CTTGGGACTTGGCTTAGTGG+TGG | 0.616590 | 4.4:-87018875 | MS.gene068274:CDS |
ATGTATGCCCGATTAATACA+AGG | 0.621258 | 4.4:-87017014 | MS.gene068274:CDS |
ATTCTTGCAGATGAGGAGCG+TGG | 0.628922 | 4.4:-87016194 | MS.gene068274:CDS |
GGAACAACAGGTAAACCTAA+GGG | 0.629104 | 4.4:-87018110 | MS.gene068274:CDS |
CCTAGAAGAGTTATCCACTT+GGG | 0.630017 | 4.4:-87013567 | MS.gene068274:CDS |
AACGACTTATTGGCAACAGG+TGG | 0.637281 | 4.4:+87018353 | None:intergenic |
AGCAGCAACAAATTCAGCAG+AGG | 0.648280 | 4.4:+87018901 | None:intergenic |
GTAGCTCAGGATCCATTGCA+CGG | 0.663777 | 4.4:+87016988 | None:intergenic |
AAGGGAGTTGTTCATACACA+CGG | 0.665894 | 4.4:-87018092 | MS.gene068274:CDS |
GCGGACATCATCAAGGCCGG+TGG | 0.669750 | 4.4:-87013863 | MS.gene068274:CDS |
ACAGTTGGAAAACCATTACC+CGG | 0.672971 | 4.4:-87016458 | MS.gene068274:CDS |
AGAATATTGGAAACTTCCAG+AGG | 0.678041 | 4.4:-87016117 | MS.gene068274:intron |
ATTGGAGCGATATGGCATGA+CGG | 0.683780 | 4.4:-87016618 | MS.gene068274:CDS |
CATATCGCTCCAATAAACGA+TGG | 0.698759 | 4.4:+87016627 | None:intergenic |
AACAGGTTGAGGAAGTGCAG+AGG | 0.703474 | 4.4:+87016676 | None:intergenic |
CTGTTTATCAGGTACTAGTG+CGG | 0.710653 | 4.4:-87013882 | MS.gene068274:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 87011672 | 87020031 | 87011672 | ID=MS.gene068274 |
chr4.4 | mRNA | 87011672 | 87020031 | 87011672 | ID=MS.gene068274.t1;Parent=MS.gene068274 |
chr4.4 | exon | 87019882 | 87020031 | 87019882 | ID=MS.gene068274.t1.exon1;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87019882 | 87020031 | 87019882 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87018811 | 87018963 | 87018811 | ID=MS.gene068274.t1.exon2;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87018811 | 87018963 | 87018811 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87018273 | 87018462 | 87018273 | ID=MS.gene068274.t1.exon3;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87018273 | 87018462 | 87018273 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87018076 | 87018164 | 87018076 | ID=MS.gene068274.t1.exon4;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87018076 | 87018164 | 87018076 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87017759 | 87017808 | 87017759 | ID=MS.gene068274.t1.exon5;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87017759 | 87017808 | 87017759 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87017309 | 87017474 | 87017309 | ID=MS.gene068274.t1.exon6;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87017309 | 87017474 | 87017309 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87016947 | 87017045 | 87016947 | ID=MS.gene068274.t1.exon7;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87016947 | 87017045 | 87016947 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87016616 | 87016708 | 87016616 | ID=MS.gene068274.t1.exon8;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87016616 | 87016708 | 87016616 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87016451 | 87016528 | 87016451 | ID=MS.gene068274.t1.exon9;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87016451 | 87016528 | 87016451 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87016118 | 87016222 | 87016118 | ID=MS.gene068274.t1.exon10;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87016118 | 87016222 | 87016118 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87014252 | 87014342 | 87014252 | ID=MS.gene068274.t1.exon11;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87014252 | 87014342 | 87014252 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87013820 | 87013893 | 87013820 | ID=MS.gene068274.t1.exon12;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87013820 | 87013893 | 87013820 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87013541 | 87013702 | 87013541 | ID=MS.gene068274.t1.exon13;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87013541 | 87013702 | 87013541 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87012428 | 87012481 | 87012428 | ID=MS.gene068274.t1.exon14;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87012428 | 87012481 | 87012428 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
chr4.4 | exon | 87011672 | 87011716 | 87011672 | ID=MS.gene068274.t1.exon15;Parent=MS.gene068274.t1 |
chr4.4 | CDS | 87011672 | 87011716 | 87011672 | ID=cds.MS.gene068274.t1;Parent=MS.gene068274.t1 |
Gene Sequence |
Protein sequence |