AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069140.t1 MTR_5g031470 98.578 1055 14 1 1 1055 1 1054 0.0 2152
MS.gene069140.t1 MTR_5g049820 96.711 912 29 1 26 937 1 911 0.0 1820
MS.gene069140.t1 MTR_5g049620 97.353 869 22 1 26 894 1 868 0.0 1752
MS.gene069140.t1 MTR_2g069950 54.437 586 236 7 243 818 197 761 0.0 607
MS.gene069140.t1 MTR_1g082920 54.906 479 207 4 328 802 76 549 2.59e-173 527
MS.gene069140.t1 MTR_7g113520 51.852 513 233 7 301 808 32 535 1.41e-165 505
MS.gene069140.t1 MTR_1g087880 48.052 385 189 3 380 757 376 756 7.52e-109 363
MS.gene069140.t1 MTR_7g112420 49.474 380 175 5 380 746 251 626 1.08e-107 357
MS.gene069140.t1 MTR_7g109130 46.253 387 187 3 380 754 79 456 3.54e-106 348
MS.gene069140.t1 MTR_7g109130 46.253 387 187 3 380 754 158 535 1.27e-105 349
MS.gene069140.t1 MTR_7g109130 46.253 387 187 3 380 754 380 757 1.84e-103 348
MS.gene069140.t1 MTR_7g112420 48.158 380 174 5 380 746 381 750 5.79e-102 344
MS.gene069140.t1 MTR_7g091290 47.532 385 188 5 380 756 372 750 1.28e-100 341
MS.gene069140.t1 MTR_7g109130 45.385 390 189 4 380 754 380 760 1.79e-100 340
MS.gene069140.t1 MTR_5g096570 45.592 397 204 6 370 757 404 797 4.37e-99 343
MS.gene069140.t1 MTR_1g083770 47.170 371 182 4 380 740 390 756 1.02e-98 334
MS.gene069140.t1 MTR_3g060900 41.163 447 242 6 323 761 364 797 1.66e-95 328
MS.gene069140.t1 MTR_8g098230 45.431 394 197 8 380 761 463 850 1.11e-92 320
MS.gene069140.t1 MTR_4g081390 39.440 464 242 7 287 732 340 782 1.96e-90 307
MS.gene069140.t1 MTR_8g104200 46.348 397 184 7 356 736 475 858 2.79e-89 313
MS.gene069140.t1 MTR_8g098230 44.279 402 198 9 380 761 463 858 3.09e-89 310
MS.gene069140.t1 MTR_2g082570 39.787 470 258 8 280 729 283 747 1.98e-88 301
MS.gene069140.t1 MTR_2g010760 44.236 373 199 7 366 730 401 772 2.44e-83 288
MS.gene069140.t1 MTR_8g072430 41.555 373 214 3 372 743 847 1216 3.74e-82 292
MS.gene069140.t1 MTR_5g025100 40.148 406 232 5 372 775 861 1257 5.27e-82 291
MS.gene069140.t1 MTR_4g092140 36.290 496 261 9 249 725 201 660 5.69e-81 278
MS.gene069140.t1 MTR_6g084490 38.928 429 209 6 358 761 439 839 7.06e-81 282
MS.gene069140.t1 MTR_7g091290 42.597 385 166 7 380 756 369 706 1.04e-80 284
MS.gene069140.t1 MTR_1g081800 39.498 438 227 10 353 770 39 458 1.73e-79 273
MS.gene069140.t1 MTR_4g081390 37.500 416 221 7 287 684 342 736 5.77e-72 254
MS.gene069140.t1 MTR_8g471180 34.679 545 303 13 331 838 69 597 2.53e-68 251
MS.gene069140.t1 MTR_4g087040 39.776 357 190 8 400 736 193 544 9.13e-62 231
MS.gene069140.t1 MTR_2g096010 31.673 562 313 17 392 899 40 584 1.41e-60 226
MS.gene069140.t1 MTR_1g067630 37.571 354 196 8 400 730 54 405 3.20e-60 224
MS.gene069140.t1 MTR_2g087840 40.503 358 186 9 400 736 88 439 3.72e-60 226
MS.gene069140.t1 MTR_1g059730 33.202 509 286 14 400 858 13 517 5.34e-57 214
MS.gene069140.t1 MTR_7g105030 32.353 510 289 15 400 858 9 513 3.62e-56 212
MS.gene069140.t1 MTR_7g105030 32.353 510 289 15 400 858 9 513 3.62e-56 212
MS.gene069140.t1 MTR_4g112350 38.547 358 199 6 393 737 116 465 1.34e-55 207
MS.gene069140.t1 MTR_3g084790 35.750 400 220 12 392 763 88 478 4.52e-55 209
MS.gene069140.t1 MTR_2g055910 35.411 401 233 9 348 735 18 405 1.16e-54 202
MS.gene069140.t1 MTR_2g082570 37.243 341 192 6 328 649 330 667 1.74e-54 202
MS.gene069140.t1 MTR_3g102170 37.027 370 180 11 401 727 9 368 2.22e-54 206
MS.gene069140.t1 MTR_5g066320 36.571 350 186 9 401 723 18 358 3.54e-54 207
MS.gene069140.t1 MTR_4g123730 39.739 307 159 7 439 723 185 487 1.90e-53 205
MS.gene069140.t1 MTR_4g094882 34.837 399 208 12 400 753 12 403 9.39e-53 201
MS.gene069140.t1 MTR_1g018940 35.792 366 190 8 401 727 9 368 1.05e-51 198
MS.gene069140.t1 MTR_8g080910 36.011 361 187 9 445 778 91 434 1.98e-50 194
MS.gene069140.t1 MTR_7g093720 32.779 421 260 12 395 809 68 471 7.14e-50 192
MS.gene069140.t1 MTR_1g484960 37.015 335 186 8 401 722 4 326 7.21e-50 193
MS.gene069140.t1 MTR_5g011500 31.579 551 299 18 399 908 56 569 3.92e-49 189
MS.gene069140.t1 MTR_1g017540 37.874 301 171 5 435 722 36 333 6.80e-49 187
MS.gene069140.t1 MTR_7g075060 33.659 410 219 12 399 772 51 443 2.01e-47 184
MS.gene069140.t1 MTR_4g071210 35.294 340 203 9 398 731 87 415 1.28e-46 182
MS.gene069140.t1 MTR_4g071210 35.294 340 203 9 398 731 87 415 1.38e-46 182
MS.gene069140.t1 MTR_3g117330 34.783 345 208 9 393 731 92 425 4.82e-46 180
MS.gene069140.t1 MTR_7g061020 31.675 382 234 11 401 764 26 398 5.22e-44 170
MS.gene069140.t1 MTR_4g124650 33.245 376 228 10 401 767 144 505 4.17e-43 171
MS.gene069140.t1 MTR_6g082470 28.479 618 360 23 401 954 31 630 2.14e-42 168
MS.gene069140.t1 MTR_5g021650 32.143 420 248 14 401 799 21 424 5.57e-41 164
MS.gene069140.t1 MTR_4g071900 32.084 427 262 13 382 797 7 416 1.11e-40 162
MS.gene069140.t1 MTR_3g055940 33.051 354 196 12 400 727 75 413 1.94e-40 162
MS.gene069140.t1 MTR_5g094310 30.713 407 230 15 400 767 74 467 1.35e-39 160
MS.gene069140.t1 MTR_8g076190 33.333 330 196 9 401 717 20 338 8.91e-38 154
MS.gene069140.t1 MTR_8g076190 33.134 335 200 9 401 722 20 343 1.30e-37 153
MS.gene069140.t1 MTR_2g101990 32.448 339 202 10 401 725 186 511 9.09e-37 149
MS.gene069140.t1 MTR_3g113110 33.234 334 200 9 401 722 20 342 1.05e-36 151
MS.gene069140.t1 MTR_8g076190 32.641 337 196 9 401 717 20 345 1.26e-36 150
MS.gene069140.t1 MTR_6g086735 31.471 340 204 8 401 725 116 441 5.42e-36 146
MS.gene069140.t1 MTR_6g086735 31.471 340 204 8 401 725 116 441 5.93e-36 146
MS.gene069140.t1 MTR_4g119980 33.237 346 195 10 401 722 206 539 1.61e-34 143
MS.gene069140.t1 MTR_2g436650 32.174 345 202 10 401 722 118 453 1.80e-33 139
MS.gene069140.t1 MTR_2g436650 32.174 345 202 10 401 722 198 533 4.93e-33 138
MS.gene069140.t1 MTR_1g075680 27.470 506 284 19 422 881 65 533 6.78e-32 134
MS.gene069140.t1 MTR_6g053680 28.344 314 204 11 397 702 2 302 3.52e-22 103
MS.gene069140.t1 MTR_3g113630 23.975 488 304 16 447 915 145 584 4.95e-21 100
MS.gene069140.t1 MTR_3g113630 23.975 488 304 16 447 915 145 584 7.11e-21 99.8
MS.gene069140.t1 MTR_5g049630 80.952 42 8 0 896 937 1 42 1.22e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069140.t1 AT2G22610 59.452 1058 389 12 23 1055 42 1084 0.0 1225
MS.gene069140.t1 AT2G22610 60.134 1041 387 13 23 1055 42 1062 0.0 1221
MS.gene069140.t1 AT2G22610 59.263 1058 390 13 23 1055 42 1083 0.0 1217
MS.gene069140.t1 AT1G72250 49.476 764 344 8 61 801 173 917 0.0 723
MS.gene069140.t1 AT1G72250 49.476 764 344 8 61 801 172 916 0.0 723
MS.gene069140.t1 AT1G72250 48.691 764 338 9 61 801 173 905 0.0 699
MS.gene069140.t1 AT1G72250 48.168 764 334 10 61 801 172 896 0.0 682
MS.gene069140.t1 AT5G27550 55.394 482 201 5 328 802 60 534 5.18e-176 533
MS.gene069140.t1 AT5G27550 55.394 482 201 5 328 802 60 534 5.18e-176 533
MS.gene069140.t1 AT2G47500 47.912 407 195 4 380 779 379 775 3.08e-110 365
MS.gene069140.t1 AT1G09170 51.351 370 166 5 380 740 414 778 7.66e-110 362
MS.gene069140.t1 AT2G47500 47.912 407 195 4 380 779 379 775 1.06e-109 365
MS.gene069140.t1 AT1G09170 51.351 370 166 5 380 740 414 778 1.52e-109 360
MS.gene069140.t1 AT1G09170 51.351 370 166 5 380 740 414 778 1.52e-109 360
MS.gene069140.t1 AT1G09170 51.351 370 166 5 380 740 414 778 4.82e-109 361
MS.gene069140.t1 AT1G09170 51.351 370 166 5 380 740 414 778 3.41e-108 362
MS.gene069140.t1 AT5G27000 48.593 391 179 4 358 740 363 739 7.08e-108 360
MS.gene069140.t1 AT1G73860 38.640 559 293 13 240 768 263 801 1.22e-104 350
MS.gene069140.t1 AT1G73860 38.779 557 295 12 240 768 346 884 2.13e-104 351
MS.gene069140.t1 AT1G18410 46.076 395 201 5 375 760 464 855 7.15e-104 349
MS.gene069140.t1 AT1G18410 46.076 395 201 5 375 760 464 855 7.15e-104 349
MS.gene069140.t1 AT1G18410 45.823 395 202 4 375 760 607 998 3.02e-102 348
MS.gene069140.t1 AT1G18410 41.513 489 260 10 260 732 331 809 9.28e-102 343
MS.gene069140.t1 AT3G44730 45.631 412 208 6 358 760 339 743 5.49e-101 343
MS.gene069140.t1 AT3G44730 45.631 412 208 6 358 760 339 743 5.49e-101 343
MS.gene069140.t1 AT3G44730 45.631 412 208 6 358 760 384 788 1.11e-100 343
MS.gene069140.t1 AT3G44730 45.631 412 208 6 358 760 384 788 1.11e-100 343
MS.gene069140.t1 AT1G18410 39.652 517 286 9 260 760 484 990 3.38e-100 342
MS.gene069140.t1 AT3G10310 45.974 385 192 6 380 754 343 721 5.05e-98 332
MS.gene069140.t1 AT3G10310 45.974 385 192 6 380 754 343 721 5.09e-98 332
MS.gene069140.t1 AT5G41310 43.299 388 184 5 386 761 408 771 6.86e-93 318
MS.gene069140.t1 AT1G63640 45.205 365 194 3 370 728 432 796 1.43e-91 316
MS.gene069140.t1 AT1G63640 45.205 365 194 3 370 728 442 806 1.73e-91 316
MS.gene069140.t1 AT1G63640 45.205 365 194 3 370 728 442 806 1.73e-91 316
MS.gene069140.t1 AT1G63640 45.205 365 194 3 370 728 442 806 1.77e-91 316
MS.gene069140.t1 AT1G09170 51.258 318 141 5 380 688 414 726 5.18e-91 308
MS.gene069140.t1 AT1G09170 51.258 318 141 5 380 688 414 726 5.18e-91 308
MS.gene069140.t1 AT4G21270 39.703 471 240 8 284 733 336 783 3.33e-90 307
MS.gene069140.t1 AT4G27180 43.814 388 201 5 365 736 352 738 3.36e-90 305
MS.gene069140.t1 AT4G27180 43.814 388 201 5 365 736 352 738 3.36e-90 305
MS.gene069140.t1 AT5G54670 41.727 417 227 6 336 737 273 688 3.03e-89 301
MS.gene069140.t1 AT5G54670 41.727 417 227 6 336 737 333 748 8.93e-89 302
MS.gene069140.t1 AT5G54670 41.727 417 227 6 336 737 333 748 8.93e-89 302
MS.gene069140.t1 AT1G63640 44.505 364 191 3 370 728 442 799 1.17e-88 308
MS.gene069140.t1 AT4G05190 40.583 446 229 10 317 730 336 777 1.13e-87 300
MS.gene069140.t1 AT4G05190 40.583 446 229 10 317 730 323 764 1.36e-87 299
MS.gene069140.t1 AT1G55550 41.766 419 218 7 366 770 57 463 5.67e-87 299
MS.gene069140.t1 AT1G09170 45.405 370 152 6 380 740 414 742 2.54e-85 298
MS.gene069140.t1 AT5G65930 41.363 411 220 6 372 775 860 1256 5.40e-85 300
MS.gene069140.t1 AT5G65930 41.363 411 220 6 372 775 859 1255 6.18e-85 300
MS.gene069140.t1 AT5G65930 41.363 411 220 6 372 775 866 1262 8.13e-85 300
MS.gene069140.t1 AT5G27950 40.394 406 207 8 353 740 30 418 8.05e-79 271
MS.gene069140.t1 AT5G65460 34.432 546 311 13 384 914 122 635 2.05e-69 253
MS.gene069140.t1 AT5G65460 34.432 546 311 13 384 914 122 635 4.15e-69 252
MS.gene069140.t1 AT5G65460 32.701 633 364 16 312 914 35 635 4.95e-69 253
MS.gene069140.t1 AT5G65460 34.432 546 311 13 384 914 122 635 6.03e-69 253
MS.gene069140.t1 AT5G10470 30.956 659 386 16 312 928 46 677 6.18e-67 246
MS.gene069140.t1 AT5G10470 30.956 659 386 16 312 928 46 677 6.25e-67 246
MS.gene069140.t1 AT5G65460 32.344 640 364 17 312 914 35 642 6.31e-67 246
MS.gene069140.t1 AT2G28620 34.576 483 264 11 400 855 50 507 6.01e-61 227
MS.gene069140.t1 AT2G28620 34.576 483 264 11 400 855 50 507 6.01e-61 227
MS.gene069140.t1 AT2G28620 34.576 483 264 11 400 855 50 507 6.71e-61 226
MS.gene069140.t1 AT3G19050 39.828 349 183 10 400 727 193 535 8.43e-61 228
MS.gene069140.t1 AT2G37420 33.406 458 269 10 400 834 48 492 1.03e-60 226
MS.gene069140.t1 AT2G37420 33.406 458 269 10 400 834 48 492 1.03e-60 226
MS.gene069140.t1 AT3G45850 32.485 511 294 13 400 884 55 540 3.17e-59 222
MS.gene069140.t1 AT3G45850 32.485 511 294 13 400 884 55 540 3.17e-59 222
MS.gene069140.t1 AT2G36200 33.594 512 280 16 400 858 12 516 2.31e-58 219
MS.gene069140.t1 AT3G44050 39.944 358 188 9 400 736 93 444 4.11e-58 219
MS.gene069140.t1 AT4G14150 37.433 374 197 10 401 749 92 453 5.12e-58 219
MS.gene069140.t1 AT5G60930 30.488 574 331 14 401 912 7 574 1.28e-57 218
MS.gene069140.t1 AT5G60930 30.488 574 331 14 401 912 7 574 1.82e-57 217
MS.gene069140.t1 AT5G60930 30.488 574 331 14 401 912 7 574 1.99e-57 217
MS.gene069140.t1 AT3G17360 34.685 444 212 13 400 788 168 588 4.36e-57 217
MS.gene069140.t1 AT3G17360 37.845 362 164 10 400 723 168 506 1.16e-56 215
MS.gene069140.t1 AT3G17360 37.845 362 164 10 400 723 168 506 1.27e-56 215
MS.gene069140.t1 AT3G23670 38.506 348 177 10 401 723 97 432 9.39e-55 207
MS.gene069140.t1 AT3G23670 38.506 348 177 10 401 723 97 432 1.19e-54 208
MS.gene069140.t1 AT3G63480 32.297 418 248 8 444 850 47 440 2.41e-54 197
MS.gene069140.t1 AT1G18550 38.323 334 190 5 401 722 152 481 2.89e-54 202
MS.gene069140.t1 AT2G36200 31.978 541 281 18 400 858 12 547 1.05e-53 204
MS.gene069140.t1 AT3G63480 32.701 422 245 10 444 850 47 444 1.18e-53 195
MS.gene069140.t1 AT3G49650 33.256 430 258 9 401 805 15 440 2.41e-53 201
MS.gene069140.t1 AT1G01950 34.821 448 236 16 399 807 59 489 1.99e-52 199
MS.gene069140.t1 AT1G01950 34.821 448 236 16 399 807 59 489 2.03e-52 199
MS.gene069140.t1 AT1G01950 34.821 448 236 16 399 807 59 489 2.45e-52 199
MS.gene069140.t1 AT5G47820 34.501 371 194 8 400 727 11 375 2.36e-51 197
MS.gene069140.t1 AT5G47820 34.501 371 194 8 400 727 11 375 2.36e-51 197
MS.gene069140.t1 AT1G21730 35.200 375 223 9 398 766 73 433 3.33e-51 196
MS.gene069140.t1 AT3G54870 27.946 594 324 17 444 947 149 728 8.92e-51 194
MS.gene069140.t1 AT3G54870 28.067 595 323 17 444 947 149 729 9.81e-51 194
MS.gene069140.t1 AT3G54870 28.067 595 323 17 444 947 149 729 1.29e-50 195
MS.gene069140.t1 AT3G50240 34.545 385 202 10 401 743 26 402 2.78e-50 193
MS.gene069140.t1 AT3G50240 34.545 385 202 10 401 743 26 402 8.89e-50 192
MS.gene069140.t1 AT3G50240 34.545 385 202 10 401 743 26 402 1.17e-49 192
MS.gene069140.t1 AT1G59540 37.710 297 169 6 436 722 35 325 2.27e-49 189
MS.gene069140.t1 AT1G12430 36.096 374 188 11 401 738 71 429 2.75e-48 187
MS.gene069140.t1 AT1G12430 36.096 374 188 11 401 738 71 429 2.86e-48 187
MS.gene069140.t1 AT3G10180 35.326 368 210 11 401 752 4 359 3.61e-48 187
MS.gene069140.t1 AT5G27950 41.634 257 136 4 493 740 1 252 3.73e-48 179
MS.gene069140.t1 AT3G10180 35.326 368 210 11 401 752 4 359 4.46e-48 187
MS.gene069140.t1 AT4G39050 34.540 359 220 9 378 731 76 424 1.07e-47 186
MS.gene069140.t1 AT3G12020 32.195 410 254 13 394 796 63 455 1.63e-47 185
MS.gene069140.t1 AT3G12020 32.195 410 254 13 394 796 63 455 1.63e-47 185
MS.gene069140.t1 AT3G12020 32.683 410 252 14 394 796 63 455 1.66e-47 184
MS.gene069140.t1 AT3G12020 32.683 410 252 14 394 796 63 455 1.66e-47 184
MS.gene069140.t1 AT5G06670 31.746 378 238 9 396 767 62 425 2.59e-47 182
MS.gene069140.t1 AT5G06670 31.746 378 238 9 396 767 62 425 2.59e-47 182
MS.gene069140.t1 AT5G06670 31.746 378 238 9 396 767 62 425 2.59e-47 182
MS.gene069140.t1 AT5G06670 31.746 378 238 9 396 767 62 425 2.72e-47 182
MS.gene069140.t1 AT5G06670 31.746 378 238 9 396 767 62 425 8.20e-47 182
MS.gene069140.t1 AT5G06670 31.746 378 238 9 396 767 62 425 8.20e-47 182
MS.gene069140.t1 AT2G21380 34.412 340 206 9 398 731 102 430 1.41e-45 179
MS.gene069140.t1 AT2G21380 34.412 340 206 9 398 731 102 430 1.41e-45 179
MS.gene069140.t1 AT5G06670 31.266 387 237 10 396 767 62 434 2.62e-45 178
MS.gene069140.t1 AT5G06670 31.266 387 237 10 396 767 62 434 2.62e-45 178
MS.gene069140.t1 AT1G01950 35.854 357 191 12 480 807 1 348 1.82e-44 173
MS.gene069140.t1 AT1G18370 32.512 406 247 12 401 790 32 426 1.85e-44 175
MS.gene069140.t1 AT5G02370 31.454 337 201 8 400 722 20 340 4.95e-41 160
MS.gene069140.t1 AT3G50240 37.333 300 146 7 484 743 3 300 8.03e-41 163
MS.gene069140.t1 AT4G38950 31.818 418 241 14 401 797 14 408 4.11e-40 160
MS.gene069140.t1 AT4G38950 31.818 418 241 14 401 797 14 408 4.11e-40 160
MS.gene069140.t1 AT4G38950 31.818 418 241 14 401 797 14 408 4.11e-40 160
MS.gene069140.t1 AT4G38950 31.818 418 241 14 401 797 14 408 4.11e-40 160
MS.gene069140.t1 AT4G38950 31.818 418 241 14 401 797 14 408 4.11e-40 160
MS.gene069140.t1 AT2G21300 33.422 377 217 13 401 766 25 378 8.17e-40 160
MS.gene069140.t1 AT2G21300 33.422 377 217 13 401 766 25 378 8.17e-40 160
MS.gene069140.t1 AT2G21300 33.422 377 217 13 401 766 25 378 8.17e-40 160
MS.gene069140.t1 AT2G21300 33.422 377 217 13 401 766 25 378 8.17e-40 160
MS.gene069140.t1 AT2G21300 33.422 377 217 13 401 766 25 378 8.17e-40 160
MS.gene069140.t1 AT4G24170 33.435 329 203 7 401 722 7 326 9.92e-40 160
MS.gene069140.t1 AT4G24170 33.435 329 203 7 401 722 7 326 9.92e-40 160
MS.gene069140.t1 AT3G43210 36.446 332 188 10 401 722 30 348 1.21e-39 159
MS.gene069140.t1 AT3G43210 36.446 332 188 10 401 722 30 348 1.21e-39 159
MS.gene069140.t1 AT3G43210 36.446 332 188 10 401 722 30 348 1.21e-39 159
MS.gene069140.t1 AT3G43210 36.446 332 188 10 401 722 30 348 1.21e-39 159
MS.gene069140.t1 AT3G43210 36.446 332 188 10 401 722 30 348 1.21e-39 159
MS.gene069140.t1 AT3G16060 32.676 355 206 10 393 730 162 500 1.64e-38 154
MS.gene069140.t1 AT5G66310 32.533 458 255 15 401 842 19 438 3.60e-38 155
MS.gene069140.t1 AT5G66310 32.533 458 255 15 401 842 19 438 3.60e-38 155
MS.gene069140.t1 AT5G66310 32.533 458 255 15 401 842 19 438 3.60e-38 155
MS.gene069140.t1 AT1G59540 38.075 239 133 5 493 722 1 233 9.24e-38 152
MS.gene069140.t1 AT3G20150 33.648 318 176 10 443 731 134 445 2.86e-36 149
MS.gene069140.t1 AT3G20150 33.648 318 176 10 443 731 134 445 2.98e-36 149
MS.gene069140.t1 AT3G51150 32.095 377 220 11 401 764 18 371 5.78e-36 148
MS.gene069140.t1 AT3G51150 32.095 377 220 11 401 764 18 371 5.78e-36 148
MS.gene069140.t1 AT3G51150 32.095 377 220 11 401 764 18 371 5.78e-36 148
MS.gene069140.t1 AT3G51150 32.095 377 220 11 401 764 18 371 6.07e-36 148
MS.gene069140.t1 AT5G65460 31.750 400 241 9 523 914 14 389 1.12e-34 144
MS.gene069140.t1 AT3G16630 32.471 348 194 10 401 722 194 526 5.57e-34 141
MS.gene069140.t1 AT3G16630 32.471 348 194 10 401 722 194 526 5.57e-34 141
MS.gene069140.t1 AT4G14330 31.111 360 198 9 474 795 120 467 6.29e-29 125
MS.gene069140.t1 AT5G42490 31.636 275 166 9 401 665 10 272 6.24e-24 109
MS.gene069140.t1 AT5G42490 31.636 275 166 9 401 665 10 272 6.42e-24 109
MS.gene069140.t1 AT5G23910 28.571 301 187 12 441 732 55 336 4.11e-21 100
MS.gene069140.t1 AT5G23910 28.571 301 187 12 441 732 51 332 4.44e-21 99.8
MS.gene069140.t1 AT3G51150 37.500 184 97 5 587 764 47 218 4.64e-19 93.6
MS.gene069140.t1 AT1G20060 26.259 278 183 6 447 709 165 435 1.95e-14 78.6
MS.gene069140.t1 AT1G20060 27.046 281 177 7 447 709 165 435 2.14e-14 78.6
MS.gene069140.t1 AT1G20060 27.046 281 177 7 447 709 165 435 2.18e-14 78.6
MS.gene069140.t1 AT1G20060 26.259 278 183 6 447 709 165 435 2.18e-14 78.6
MS.gene069140.t1 AT1G20060 27.046 281 177 7 447 709 165 435 2.21e-14 78.6
MS.gene069140.t1 AT1G20060 26.259 278 183 6 447 709 165 435 2.23e-14 78.6
MS.gene069140.t1 AT1G20060 27.046 281 177 7 447 709 165 435 2.26e-14 78.6
MS.gene069140.t1 AT1G20060 27.046 281 177 7 447 709 165 435 2.37e-14 78.6
MS.gene069140.t1 AT1G20060 27.046 281 177 7 447 709 165 435 2.81e-14 78.2

Find 199 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGTTCTGCTTTGTTAAA+AGG 0.137796 5.3:-20426597 MS.gene069140:CDS
AGATGGATGCCTTGGAATTT+TGG 0.152963 5.3:-20431197 MS.gene069140:CDS
GTTGAGATTATTAATGTAAA+TGG 0.154741 5.3:-20432788 MS.gene069140:CDS
CTTCTTGTTGATTTGGGATT+AGG 0.155668 5.3:+20433526 None:intergenic
TAAACCATCTTATTTAATTC+AGG 0.204428 5.3:+20431661 None:intergenic
ACTGAATCTTCTTGTTGATT+TGG 0.211506 5.3:+20433519 None:intergenic
CAAACTTTGGCTTGTGGATT+TGG 0.226904 5.3:-20428702 MS.gene069140:CDS
ATAAGATTTGAGAGTTTAAA+TGG 0.237236 5.3:-20432532 MS.gene069140:CDS
TTCTTGTTGATTTGGGATTA+GGG 0.260255 5.3:+20433527 None:intergenic
CTGAATCTTCTTGTTGATTT+GGG 0.266659 5.3:+20433520 None:intergenic
GTATCAATTTGCTTCTTAAC+AGG 0.277522 5.3:+20428178 None:intergenic
AACGTTTGCATCTTTGCTTA+TGG 0.282569 5.3:-20429396 MS.gene069140:CDS
TGCATACCTTGATCATCTTT+TGG 0.289514 5.3:+20431127 None:intergenic
AGTTCAAAACTCATTCAAAA+TGG 0.289625 5.3:-20433447 MS.gene069140:CDS
TTCACCAGATCTCAAAATTC+AGG 0.292712 5.3:-20433423 MS.gene069140:intron
AACTGAAATGAGTAGGAAAA+TGG 0.302903 5.3:-20432079 MS.gene069140:CDS
AGAAGCAATTATCAGTTTAC+AGG 0.305197 5.3:-20431848 MS.gene069140:CDS
CCGTTGTCGTCCATTGAATA+AGG 0.307448 5.3:-20431269 MS.gene069140:CDS
AAAGTAGTCACATTCCTTAT+AGG 0.311564 5.3:-20428565 MS.gene069140:intron
AACCGATCTCTTTCTGCTCT+TGG 0.317036 5.3:-20428614 MS.gene069140:CDS
AGAATAGAGGTGTAAATTAC+AGG 0.339481 5.3:-20429329 MS.gene069140:CDS
CTAGCTCTCTTATGAGATAA+AGG 0.344366 5.3:+20426390 None:intergenic
AGGTGTGGCCGCCACCTTTA+CGG 0.352301 5.3:+20426713 None:intergenic
CAGGTTCTCAGCTTGTTTCT+CGG 0.363391 5.3:+20431915 None:intergenic
TTGTTAGTGGGATCTGCATT+AGG 0.365227 5.3:-20432501 MS.gene069140:CDS
ATGAACTTGATAAGAAGAAA+TGG 0.365625 5.3:-20431873 MS.gene069140:CDS
ATTCAGCATGCTATGTATAA+TGG 0.369898 5.3:-20428765 MS.gene069140:intron
CTGGCAGGTTCTATCTGAAT+TGG 0.375454 5.3:-20432638 MS.gene069140:intron
AAGCAGAACCTTGACTTATC+TGG 0.377957 5.3:+20426607 None:intergenic
AATTAATAGGTATACCTATA+AGG 0.378135 5.3:+20428551 None:intergenic
GACATTTCAACCTTATTCAA+TGG 0.382688 5.3:+20431259 None:intergenic
ATCTTTGCTTATGGACAAAC+AGG 0.385232 5.3:-20429387 MS.gene069140:CDS
GCATTTGTTTAGAGTTAGTA+AGG 0.386562 5.3:-20429298 MS.gene069140:CDS
ATGCAGATCCCACTAACAAC+TGG 0.391897 5.3:+20432505 None:intergenic
GATTTGGGATTAGGGTTTGA+GGG 0.398586 5.3:+20433535 None:intergenic
ATGCGACTCTCAATATCATT+TGG 0.398877 5.3:+20426657 None:intergenic
CCGCACGAATGAGGCGATAG+TGG 0.400753 5.3:-20432915 MS.gene069140:CDS
CTACGGGACCAACATCAAAA+AGG 0.402821 5.3:-20429197 MS.gene069140:intron
GCTTATGGACAAACAGGAAC+AGG 0.410003 5.3:-20429381 MS.gene069140:CDS
AATCCCTGAATTAAATAAGA+TGG 0.412442 5.3:-20431665 MS.gene069140:CDS
AAGGTTCTGCTTTGTTAAAA+GGG 0.417581 5.3:-20426596 MS.gene069140:CDS
CCGCCTAAAATTGTAAGAAC+TGG 0.418408 5.3:-20426453 MS.gene069140:CDS
CGGGCCACTGTGAAGGATGA+TGG 0.419376 5.3:-20432565 MS.gene069140:CDS
TTGAACACCCTCATTCCTTT+CGG 0.419530 5.3:+20432764 None:intergenic
AAAGTATGAAAATAAGATAA+AGG 0.423243 5.3:-20432160 MS.gene069140:CDS
GTGGATATTATCCTTTCCCT+TGG 0.424834 5.3:+20427947 None:intergenic
AGAGTGAGGGGCGTTGAGTT+AGG 0.425970 5.3:-20428202 MS.gene069140:CDS
TCACTTGATCAAGCTCCATC+TGG 0.426399 5.3:+20432049 None:intergenic
TTGAGATTATTAATGTAAAT+GGG 0.429309 5.3:-20432787 MS.gene069140:CDS
TGATTTGGGATTAGGGTTTG+AGG 0.430554 5.3:+20433534 None:intergenic
CTTGCAAAACATTGAGAGTA+AGG 0.432710 5.3:-20427970 MS.gene069140:CDS
AAACCATCTTATTTAATTCA+GGG 0.438958 5.3:+20431662 None:intergenic
GGAAGCAATGCTAGAGCAGT+TGG 0.441485 5.3:-20428938 MS.gene069140:CDS
TGAAATTCGTTGGATTGAAT+CGG 0.445524 5.3:+20433564 None:intergenic
TCAATTATGTGAAAAGTTGA+AGG 0.451391 5.3:-20427838 MS.gene069140:CDS
CTTTGGCTTGTGGATTTGGC+AGG 0.451627 5.3:-20428698 MS.gene069140:CDS
AGGGTCATTGTGAAATTCGT+TGG 0.451639 5.3:+20433554 None:intergenic
GGAGGGGAGGCGACTAATGA+AGG 0.451939 5.3:-20432992 MS.gene069140:CDS
ATCAATGGTAATCTCTGTGC+TGG 0.454206 5.3:-20429427 MS.gene069140:CDS
AGCTAGCACAAGCAGAGATC+AGG 0.455058 5.3:-20426373 MS.gene069140:CDS
ATCTTCCTTTCTAAAAGATA+AGG 0.457713 5.3:-20427209 MS.gene069140:intron
GGTTTATGCAGTACAGGAGT+TGG 0.461163 5.3:-20431644 MS.gene069140:CDS
ATGTTGGTCCCGTAGCCAAT+AGG 0.464243 5.3:+20429205 None:intergenic
GTGGCGGCCACACCTGATAT+AGG 0.464738 5.3:-20426705 MS.gene069140:CDS
CTGCTGTACTCTTCAACATA+AGG 0.465376 5.3:-20427802 MS.gene069140:intron
TGAACAAATCAGAGACCTAT+TGG 0.466284 5.3:-20429220 MS.gene069140:CDS
CACTACAGCTGATTGATTGT+CGG 0.468814 5.3:-20432585 MS.gene069140:CDS
GACAGCAAATTTCCAACAGA+AGG 0.470847 5.3:-20427476 MS.gene069140:intron
GTTAAGAAGCAAATTGATAC+AGG 0.478187 5.3:-20428175 MS.gene069140:CDS
GAAAAGATTAAAGAACTTGA+AGG 0.479522 5.3:-20427912 MS.gene069140:CDS
GGAATCCTTGCTAAAACAAC+AGG 0.479953 5.3:-20427040 MS.gene069140:intron
ACTACAGCTGATTGATTGTC+GGG 0.480686 5.3:-20432584 MS.gene069140:CDS
CACAAGCCAAAGTTTGCTCT+TGG 0.483420 5.3:+20428709 None:intergenic
TGTTTAGAGTTAGTAAGGAA+AGG 0.483579 5.3:-20429293 MS.gene069140:CDS
AGCTGGGTGTACAACGGTTG+TGG 0.484316 5.3:-20431236 MS.gene069140:CDS
GGGCCACTGTGAAGGATGAT+GGG 0.489671 5.3:-20432564 MS.gene069140:CDS
TGAACTTGATAAGAAGAAAT+GGG 0.489705 5.3:-20431872 MS.gene069140:CDS
AGAATTGACAACCTTCCTCC+TGG 0.490896 5.3:-20432836 MS.gene069140:CDS
GTTTATGCAGTACAGGAGTT+GGG 0.491474 5.3:-20431643 MS.gene069140:intron
TAAGATGGTTTATGCAGTAC+AGG 0.497109 5.3:-20431650 MS.gene069140:CDS
AATGGAAGCCCAGTTGTTAG+TGG 0.500095 5.3:-20432514 MS.gene069140:CDS
CTGTTATGTTGAAGCCGTAA+AGG 0.501805 5.3:-20426727 MS.gene069140:CDS
TCAGAGTCTCACCGACATCC+TGG 0.502411 5.3:+20428245 None:intergenic
AATGAAGTTCAAGAGGCTAA+AGG 0.507487 5.3:-20431433 MS.gene069140:intron
TTACATTCAATGAAATCGCT+TGG 0.510215 5.3:+20432350 None:intergenic
CGTGCAAGGAGAGCGACTTA+AGG 0.510478 5.3:-20428651 MS.gene069140:CDS
GTCACTTATGTTGTCAACCT+TGG 0.512217 5.3:+20428982 None:intergenic
ATGAAATCGCTTGGCACTGG+TGG 0.513500 5.3:+20432359 None:intergenic
GCAGCAAAAGATGGATGCCT+TGG 0.514816 5.3:-20431205 MS.gene069140:CDS
GATTGAAATTCCTTCATCAC+AGG 0.517243 5.3:-20432312 MS.gene069140:intron
TGTTTACATACAAGAAGAAA+AGG 0.517798 5.3:-20432741 MS.gene069140:intron
AGGAGAGCGACAAAAGAGTC+AGG 0.520784 5.3:-20432481 MS.gene069140:intron
TGAGAGAAAACTGAAAGAGC+AGG 0.520980 5.3:-20427073 MS.gene069140:CDS
TGATGAAGAGTGAGCAGTCT+CGG 0.521247 5.3:-20431720 MS.gene069140:CDS
GACACATTCATGTGCTTCAA+AGG 0.521252 5.3:+20431693 None:intergenic
TCACCGACATCCTGGTCTGA+TGG 0.521468 5.3:+20428253 None:intergenic
AATAAGGTTGAAATGTCAGC+TGG 0.522417 5.3:-20431253 MS.gene069140:CDS
ATCTATTAGAAATACTCCTC+AGG 0.524245 5.3:+20431896 None:intergenic
CTTATGTTGAAGAGTACAGC+AGG 0.525002 5.3:+20427803 None:intergenic
AATGTTTGTAAATGCGGGAG+GGG 0.526382 5.3:-20433008 MS.gene069140:CDS
ACATTGAGAACAATTTAGTC+GGG 0.528952 5.3:-20426524 MS.gene069140:CDS
GACATTGAGAACAATTTAGT+CGG 0.530117 5.3:-20426525 MS.gene069140:CDS
GAGATAAAACAAAATTATGA+AGG 0.533866 5.3:-20429034 MS.gene069140:CDS
AACATAGTAGTCGATCTCAT+TGG 0.535582 5.3:-20428898 MS.gene069140:intron
ATGTGTTACAAACCTTCTGT+TGG 0.538656 5.3:+20427464 None:intergenic
TCAATGAAATCGCTTGGCAC+TGG 0.541901 5.3:+20432356 None:intergenic
ACATTTAAGTCACTCACTAC+AGG 0.542756 5.3:-20432027 MS.gene069140:intron
CGTCATTAACTGAAATGAGT+AGG 0.544840 5.3:-20432086 MS.gene069140:CDS
GAAGGAACAGAGCAGAATAG+AGG 0.546085 5.3:-20429342 MS.gene069140:CDS
CTCAGCAGATGAGAAACAAA+AGG 0.546632 5.3:-20426563 MS.gene069140:CDS
GCGACTAATGAAGGAGCTGA+TGG 0.551390 5.3:-20432983 MS.gene069140:CDS
TTGGATATCTATGCAGCTGT+TGG 0.552000 5.3:-20432619 MS.gene069140:CDS
ACACCTCTAACCTGTGATGA+AGG 0.552995 5.3:+20432302 None:intergenic
GATTTATCAGTCAGCTCGGG+TGG 0.554237 5.3:-20432873 MS.gene069140:CDS
TAGACATACCTAGTGAGTCT+TGG 0.554882 5.3:+20428425 None:intergenic
CAAGATATTGTCCAGGAGGA+AGG 0.555315 5.3:+20432825 None:intergenic
TAATAATCTCAACAAAATGC+AGG 0.556051 5.3:+20432798 None:intergenic
GCTCTTCAATGAAGTTCAAG+AGG 0.556177 5.3:-20431440 MS.gene069140:CDS
CAAGAGCAAACTTTGGCTTG+TGG 0.556310 5.3:-20428708 MS.gene069140:CDS
CATTTACTCCAAGACTCACT+AGG 0.556345 5.3:-20428433 MS.gene069140:intron
CGTCGATTTATCAGTCAGCT+CGG 0.556612 5.3:-20432877 MS.gene069140:CDS
CTCCAAGAGCAGAAAGAGAT+CGG 0.556711 5.3:+20428612 None:intergenic
CGACAATCAATCAGCTGTAG+TGG 0.559465 5.3:+20432586 None:intergenic
TGTGTAATGTTTGTAAATGC+GGG 0.560456 5.3:-20433013 MS.gene069140:CDS
AATCAGAGACCTATTGGCTA+CGG 0.561642 5.3:-20429214 MS.gene069140:CDS
TATACACCAAAAGATGATCA+AGG 0.562132 5.3:-20431133 MS.gene069140:intron
AGCTGAAAGATCAGTTGCAA+GGG 0.562482 5.3:-20427243 MS.gene069140:CDS
GTGTGGACTGTACTGCAAGC+TGG 0.563345 5.3:-20428959 MS.gene069140:CDS
CTAAAATTGTAAGAACTGGT+AGG 0.564054 5.3:-20426449 MS.gene069140:CDS
TGAGAGTAAGGCCAAGGGAA+AGG 0.567887 5.3:-20427958 MS.gene069140:CDS
AGTGTACCAAGAGCAAACTT+TGG 0.568781 5.3:-20428715 MS.gene069140:CDS
ATGGAAGCCCAGTTGTTAGT+GGG 0.572521 5.3:-20432513 MS.gene069140:CDS
GTTTGTAAATGCGGGAGGGG+AGG 0.572631 5.3:-20433005 MS.gene069140:CDS
ATCAGAGACCTATTGGCTAC+GGG 0.572963 5.3:-20429213 MS.gene069140:CDS
TAACTTTGCAACTAGAGTGA+GGG 0.574352 5.3:-20428215 MS.gene069140:CDS
AAACATTGAGAGTAAGGCCA+AGG 0.574522 5.3:-20427964 MS.gene069140:CDS
GCTTTCTTCTAATTTCCTCA+AGG 0.574993 5.3:+20427992 None:intergenic
TTGGAGATTCATCACTTGTG+CGG 0.575327 5.3:+20426676 None:intergenic
ACAAGCAGAGATCAGGCTCA+AGG 0.578572 5.3:-20426366 MS.gene069140:CDS
GTCGATTTATCAGTCAGCTC+GGG 0.579050 5.3:-20432876 MS.gene069140:CDS
TAAATGGGCCGAAAGGAATG+AGG 0.580606 5.3:-20432772 MS.gene069140:CDS
GAAAGAGCAGGAGCAGAACT+CGG 0.583759 5.3:-20427061 MS.gene069140:CDS
ACAAAGAGCGAGAGCAACAG+TGG 0.585453 5.3:-20426761 MS.gene069140:CDS
TCAACAAGAAGATTCAGTAA+TGG 0.588715 5.3:-20433514 MS.gene069140:CDS
ACGAATGAGGCGATAGTGGA+AGG 0.588795 5.3:-20432911 MS.gene069140:CDS
ACAAATAAGTCCATCAGACC+AGG 0.589044 5.3:-20428263 MS.gene069140:CDS
CAATTATGTGAAAAGTTGAA+GGG 0.589053 5.3:-20427837 MS.gene069140:CDS
ACCTTGGCTTCTACAACACC+AGG 0.590292 5.3:+20428998 None:intergenic
AAGCTGAAAGATCAGTTGCA+AGG 0.592363 5.3:-20427244 MS.gene069140:CDS
TGTTGAAGCCGTAAAGGTGG+CGG 0.594372 5.3:-20426721 MS.gene069140:CDS
GTGTGTAATGTTTGTAAATG+CGG 0.597843 5.3:-20433014 MS.gene069140:CDS
TTAACTTTGCAACTAGAGTG+AGG 0.598608 5.3:-20428216 MS.gene069140:CDS
TGATTGTCGGGCCACTGTGA+AGG 0.604540 5.3:-20432572 MS.gene069140:CDS
GGAACTTGACTAGTAATGAC+CGG 0.608114 5.3:+20426411 None:intergenic
AGCCAGTTGCCAAAATTCCA+AGG 0.610337 5.3:+20431188 None:intergenic
CAAAAGAATGCTATGAGGCG+TGG 0.610480 5.3:-20432110 MS.gene069140:CDS
AGGCTCAAGGAGTTAAAGAG+AGG 0.613323 5.3:-20426353 MS.gene069140:CDS
GAAGGACATCATCATGTACC+TGG 0.614193 5.3:-20429016 MS.gene069140:CDS
ATTAATGTAAATGGGCCGAA+AGG 0.614341 5.3:-20432779 MS.gene069140:CDS
CATATCTGTTAGTGTGCTCG+AGG 0.615354 5.3:-20429250 MS.gene069140:CDS
TGCAGATCCCACTAACAACT+GGG 0.615645 5.3:+20432506 None:intergenic
GGCTCAAGGAGTTAAAGAGA+GGG 0.615879 5.3:-20426352 MS.gene069140:CDS
AGGTCAACAAGATATTGTCC+AGG 0.619450 5.3:+20432818 None:intergenic
AACTTTGCAACTAGAGTGAG+GGG 0.624205 5.3:-20428214 MS.gene069140:CDS
CTTGCAAAGACTGACGTGCA+AGG 0.625121 5.3:-20428665 MS.gene069140:CDS
AAAATCATTCAGATTTGACA+GGG 0.628273 5.3:-20431158 MS.gene069140:CDS
CTATCACGTAAAGTGGATGA+CGG 0.629410 5.3:+20426498 None:intergenic
GCAAGGAGAGCGACTTAAGG+AGG 0.629473 5.3:-20428648 MS.gene069140:CDS
ATGGCAGATGAAGGAACTAG+AGG 0.629546 5.3:-20426790 MS.gene069140:intron
ATGGTAATCTCTGTGCTGGA+TGG 0.630703 5.3:-20429423 MS.gene069140:CDS
AGAAACAAGCTGAGAACCTG+AGG 0.634481 5.3:-20431912 MS.gene069140:CDS
CAAAGCAAAAGAATGCTATG+AGG 0.636735 5.3:-20432115 MS.gene069140:CDS
ACTTCAAAAGACAAAAGCAA+TGG 0.638216 5.3:-20428149 MS.gene069140:intron
GGCCACTGTGAAGGATGATG+GGG 0.640167 5.3:-20432563 MS.gene069140:CDS
ACCTGGTGTTGTAGAAGCCA+AGG 0.641911 5.3:-20428999 MS.gene069140:CDS
GTAAACCGCCAGATAAGTCA+AGG 0.643578 5.3:-20426615 MS.gene069140:CDS
GAGCTGACTGATAAATCGAC+GGG 0.644570 5.3:+20432879 None:intergenic
CCACTATCGCCTCATTCGTG+CGG 0.646554 5.3:+20432915 None:intergenic
AGTCCATCAGACCAGGATGT+CGG 0.647343 5.3:-20428256 MS.gene069140:CDS
CAGAACCTTGACTTATCTGG+CGG 0.648706 5.3:+20426610 None:intergenic
CGAGCTGACTGATAAATCGA+CGG 0.648723 5.3:+20432878 None:intergenic
TTATGTTGAAGCCGTAAAGG+TGG 0.649045 5.3:-20426724 MS.gene069140:CDS
ATTTATCAGTCAGCTCGGGT+GGG 0.649156 5.3:-20432872 MS.gene069140:CDS
TAGGCTAACAACAAAACCGC+CGG 0.653426 5.3:-20426430 MS.gene069140:CDS
AATGAGGCGATAGTGGAAGG+TGG 0.655012 5.3:-20432908 MS.gene069140:CDS
AACATTGAGAGTAAGGCCAA+GGG 0.658460 5.3:-20427963 MS.gene069140:CDS
TAATGTTTGTAAATGCGGGA+GGG 0.661653 5.3:-20433009 MS.gene069140:CDS
AACAAGCATAGAATCGAACA+AGG 0.667491 5.3:+20433476 None:intergenic
GTAATGTTTGTAAATGCGGG+AGG 0.668947 5.3:-20433010 MS.gene069140:CDS
AAATGGGCCGAAAGGAATGA+GGG 0.671060 5.3:-20432771 MS.gene069140:CDS
CCTTATTCAATGGACGACAA+CGG 0.673690 5.3:+20431269 None:intergenic
TTGACAACATAAGTGACGTG+TGG 0.675867 5.3:-20428976 MS.gene069140:CDS
TCAACAAGATATTGTCCAGG+AGG 0.688741 5.3:+20432821 None:intergenic
GAAGTAAAGAAGAATCCTTG+AGG 0.717866 5.3:-20428007 MS.gene069140:CDS
ACTTGACTAGTAATGACCGG+CGG 0.732625 5.3:+20426414 None:intergenic
ATAAGGTTGAAATGTCAGCT+GGG 0.739136 5.3:-20431252 MS.gene069140:CDS
TCACGTAAAGTGGATGACGG+TGG 0.739685 5.3:+20426501 None:intergenic
AATGTCAGCTGGGTGTACAA+CGG 0.751221 5.3:-20431242 MS.gene069140:CDS
CACCCCATCATCCTTCACAG+TGG 0.762666 5.3:+20432561 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.3 gene 20426323 20433592 20426323 ID=MS.gene069140
chr5.3 mRNA 20426323 20433592 20426323 ID=MS.gene069140.t1;Parent=MS.gene069140
chr5.3 exon 20433424 20433592 20433424 ID=MS.gene069140.t1.exon1;Parent=MS.gene069140.t1
chr5.3 CDS 20433424 20433592 20433424 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20432742 20433043 20432742 ID=MS.gene069140.t1.exon2;Parent=MS.gene069140.t1
chr5.3 CDS 20432742 20433043 20432742 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20432482 20432653 20432482 ID=MS.gene069140.t1.exon3;Parent=MS.gene069140.t1
chr5.3 CDS 20432482 20432653 20432482 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20432313 20432383 20432313 ID=MS.gene069140.t1.exon4;Parent=MS.gene069140.t1
chr5.3 CDS 20432313 20432383 20432313 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20432028 20432211 20432028 ID=MS.gene069140.t1.exon5;Parent=MS.gene069140.t1
chr5.3 CDS 20432028 20432211 20432028 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20431837 20431946 20431837 ID=MS.gene069140.t1.exon6;Parent=MS.gene069140.t1
chr5.3 CDS 20431837 20431946 20431837 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20431644 20431743 20431644 ID=MS.gene069140.t1.exon7;Parent=MS.gene069140.t1
chr5.3 CDS 20431644 20431743 20431644 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20431434 20431520 20431434 ID=MS.gene069140.t1.exon8;Parent=MS.gene069140.t1
chr5.3 CDS 20431434 20431520 20431434 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20431134 20431310 20431134 ID=MS.gene069140.t1.exon9;Parent=MS.gene069140.t1
chr5.3 CDS 20431134 20431310 20431134 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20429198 20429471 20429198 ID=MS.gene069140.t1.exon10;Parent=MS.gene069140.t1
chr5.3 CDS 20429198 20429471 20429198 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20428899 20429060 20428899 ID=MS.gene069140.t1.exon11;Parent=MS.gene069140.t1
chr5.3 CDS 20428899 20429060 20428899 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20428566 20428781 20428566 ID=MS.gene069140.t1.exon12;Parent=MS.gene069140.t1
chr5.3 CDS 20428566 20428781 20428566 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20428434 20428471 20428434 ID=MS.gene069140.t1.exon13;Parent=MS.gene069140.t1
chr5.3 CDS 20428434 20428471 20428434 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20428150 20428313 20428150 ID=MS.gene069140.t1.exon14;Parent=MS.gene069140.t1
chr5.3 CDS 20428150 20428313 20428150 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20427803 20428054 20427803 ID=MS.gene069140.t1.exon15;Parent=MS.gene069140.t1
chr5.3 CDS 20427803 20428054 20427803 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20427477 20427542 20427477 ID=MS.gene069140.t1.exon16;Parent=MS.gene069140.t1
chr5.3 CDS 20427477 20427542 20427477 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20427210 20427284 20427210 ID=MS.gene069140.t1.exon17;Parent=MS.gene069140.t1
chr5.3 CDS 20427210 20427284 20427210 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20427041 20427106 20427041 ID=MS.gene069140.t1.exon18;Parent=MS.gene069140.t1
chr5.3 CDS 20427041 20427106 20427041 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
chr5.3 exon 20426323 20426805 20426323 ID=MS.gene069140.t1.exon19;Parent=MS.gene069140.t1
chr5.3 CDS 20426323 20426805 20426323 ID=cds.MS.gene069140.t1;Parent=MS.gene069140.t1
Gene Sequence

>MS.gene069140

ATGGAACCGATTCAATCCAACGAATTTCACAATGACCCTCAAACCCTAATCCCAAATCAACAAGAAGATTCAGTAATGGAAGATGCAAACGATTCCTTGTTCGATTCTATGCTTGTTGATTCAAGTTCAAAACTCATTCAAAATGGCTTCACCAGATCTCAAAATTCAGGTTAGAATTTCACAATTTCAGTTCATAGTTTTTATGATTCACACACAATACGATCAAAATATGTAAAATTATCTTTTCTTTTTCCCCTCTTTCTAAGTACAATTCCCAATCACAGTTAAAAAAAACTTGCTTTTCAATCTGGGTTGTTTGAAAAATGTGTTTTTCTTTACAATTATTTGACAAAAAATGTTGGTAAGTAAATTAGGGTTAATTGGGGTTTTAAAATTATTGTTTAGGTTTTGATAAATTGTAAATCTGGGTAGTTTGAAAAATGTAACACTAGAACTAGAATATTCCAAGAATTACGAAAGGACTTAAGATTAATATTATTTATTAATTTGTTAAATTAAGTGTTCACTTTTAATGTATATATTTTGAAGCAGAGGAGTGTGTAATGTTTGTAAATGCGGGAGGGGAGGCGACTAATGAAGGAGCTGATGGAGTGAATTTTCTGAGTGACACTTTTTTTGACGGTGGCAATGTTTTCCGCACGAATGAGGCGATAGTGGAAGGTGGAGATTACCCGTCGATTTATCAGTCAGCTCGGGTGGGAAGTTTTAGTTATAGAATTGACAACCTTCCTCCTGGACAATATCTTGTTGACCTGCATTTTGTTGAGATTATTAATGTAAATGGGCCGAAAGGAATGAGGGTGTTCAATGTTTACATACAAGAAGAAAAGGTGAGCTTTTTCTGCAGAACTAGTGCTTTTACGTTTGAGAAACTTGTAGCTTGAACTCATTTTTTAATTGTAATAATATGGCTGGCAGGTTCTATCTGAATTGGATATCTATGCAGCTGTTGGAGTCAACAAGCCACTACAGCTGATTGATTGTCGGGCCACTGTGAAGGATGATGGGGTGATTCTCATAAGATTTGAGAGTTTAAATGGAAGCCCAGTTGTTAGTGGGATCTGCATTAGGAGAGCGACAAAAGAGTCAGGTACTTAATTTCTTCAGTTTACTGTGCTTGATTAGTTTTTCCAGTGGTATTGAAGTTACTCAGCAATTTGTTATTGTCTACGGTATTTTGCTATACAGTTCCACCAGTGCCAAGCGATTTCATTGAATGTAACTACTGTGCTGCGCAGATTGAAATTCCTTCATCACAGGTTAGAGGTGTACACCAGTTGATATGTGGCTGTTTGAAGTGTCAAATATATCATAGGCTCACAGCATTTTGTTTTTCCTGATTTTAATTGGAATCTTTCAGATAAAAGTTATGCAAACAAAATCTACAGCAAAGTATGAAAATAAGATAAAGGAGCTTACTATGCAGTGCGAGCTCAAAGCAAAAGAATGCTATGAGGCGTGGACGTCATTAACTGAAATGAGTAGGAAAATGGAAAAAGTCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACAGGTATTGCACGGCCTTCAAACAAGAAACATATAAAAATCATAATCTTAGACCTTTCTCAGTTAGATTAATGTGATTTGTCAGAACAAACTGCCGAGAAACAAGCTGAGAACCTGAGGAGTATTTCTAATAGATATGAACTTGATAAGAAGAAATGGGCAGAAGCAATTATCAGTTTACAGGAAAAAGTAAAGGTAAGTGACAGAGTTTAGAGTTACTAACTTACTATCATTTATTATAATTCTTAGGAACACATTAAGAGTATCGACACTAAATTTGTTTTGCAGTTGATGAAGAGTGAGCAGTCTCGGCTTTCCTTTGAAGCACATGAATGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTATGCAGTACAGGAGTTGGGTATGCTTCAATTACATTGTTCATTCTCCATTTTTATTAATTAAGACCGAAGAATTGTACATATTTTTTTTTAGTTTTGGAGTAGTTTGAATCGTGTTAAAGGGCTAGATTTTTTTTATGCAGTTAAGCAGTGTGAAGATCTTAAAGTGAAGTATTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGTATGTTATTGTTATCATGTTTACTTATTCTATTTAGTATAAGTAGACTTTGTTTCTATTTGACAAGTATTATTATAAGTCAAAGGCGTTAAATTCTAATGTGCTTCTGTTATGAAAACACAGGGAACATCAGAGTTTTTTGCCGTTGTCGTCCATTGAATAAGGTTGAAATGTCAGCTGGGTGTACAACGGTTGTGGATTTTGATGCAGCAAAAGATGGATGCCTTGGAATTTTGGCAACTGGCTCCTCTAAAAAATCATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGGTATGCACAGAATGTGATACAAGAACTCTGTTTGCTTGACAATCATTAATCATTATTGTCATATTAGTTCGCGGAAATAAATATAAGGTTCAATATTTTTTTATAGTCCCTATAAAATTAAAACATTCCAAGTTTAGTCCCTGTTTTAAAAAATAGGTATTTAAGTCATTGAAATATTCATTTCTTAGGCCTATTAATCCTCCAAATAGGTGCCAAATAGTGACTACACATGGAAGGCCTAAATTTTGTAGGATGCAAAGCATAATTAACCTGTAAATATAACGTTATGACATGATTAGTATCATCAACCCTTGTGACTTGAGTTTTTGAATATATTCCATTATTTTCATCTTGTTATCACATATTGATTGCCTTGATACCCCTGCACACTCCATCCTTCACATGCTCACAATCCCAAATTGTACCAAACATTCCTGCACAAAACCTGATGTAGCAGTACCCAGGGGCGGACCTGGACTTTCAATACTAGTGGGGCAATTTTTTTTTGGTCAAATAATTAAATATTTTTTCTTTATAATATATTTTTCATTTGTTGAAAATGAACTAAAATTATATCATTACTAATTGTGCTAAGAACATTTCTTTCTATATAAGTTACAAGAGATGTCAAAATGCTCTAGCAGGATACCCGTGCATACGGACGGGTGAGAGCGTTTCGCTCTTTAGTTGGAAGCAAGTCGCAATTGCATATGTACAAATTGTACAAAAATTTATTTTCGTATTAACTATGAGTAAAAATATAGACATGCGTATAAATTAAAAATTAAAATCAGTCTCCGTATTAATATACAAGTTAAAATATAAACACATGTATAAATTAAAAAAAAAAAATTCTCTTATATGAGTAAAAATATAGACACGTATATAAATTAAAAAAAATATGTCTTCGTATTAATATATGAGTAAAAATATAGACAGTCGTATAAACATAATAAAAATTAGATGTCTGTATTAATATACGAGTAAAAATATAAAGTGAATCGAACAAAACAAAATTTAAAAAAAAAATAAATCGGACCTGAACTGGTGTGGCACTTGCCACACCATGCCTTGTTCAGGTCCGTCCCTGGCAGTACCCCTGCCACAGCAAATGTGGCTCACTAATAGTCCACAATGCAAATCAAATAATACATTTAATAAATTTCACGCTCTGGCAAAGGGGTTGATAACAACTTGACAGAAAGTAAAACATAATGCACACACTGTACTATGTAAATTACAATAAAGGATAAAGGGATTTAATGAAGTGTTTACTCCATAAGATTGAATTTGAAGGAATGGAGAAATGAGGATAGAACTTTGTTTTAAAGAAGATACGGAATGGAGAGAAACCCTTCTTCAAAAAAAGGAATGGAGAAAAACCGAATGGAATTGTTGTTGTAGAAAAGAAACAAAAAAACTTCAACTAACCTCCCGTTCAGTAACCGATATTGAGTTTTTTTTTATTTTTTTTATTTTTAATAATGGAAAAAGGATAGGAATTTAAGTTTAAAACAATGTGATTAGATTTGTAAATGGATAAATTAGTAACTGCTGGTATATTATATTAATTTGAAGTTAGTAGATTCTTGTTGTTGTTATTATTATGATTATTTACACAATTGGAAGTTTTCTAAGAACAGTGTTGGTATTGTTTAACAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTGCTGGATGGCTACAACGTTTGCATCTTTGCTTATGGACAAACAGGAACAGGAAAAACATTTACTATGGAAGGAACAGAGCAGAATAGAGGTGTAAATTACAGGACTCTTGAGCATTTGTTTAGAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGTGTGCTCGAGGTTTACAATGAACAAATCAGAGACCTATTGGCTACGGGACCAACATCAAAAAGGTAACCTTTGTTGAGTTTGTCATTGATATTTCATTTGCAACAGTTTGGTATAGTAAATCTTTGTCAACGTGAAATACTACTAGTTTAACTATGAAAATATGGCAAGCTAAAATGAGTTGTATCGAAATTGTTATTAGGTTGGAGATAAAACAAAATTATGAAGGACATCATCATGTACCTGGTGTTGTAGAAGCCAAGGTTGACAACATAAGTGACGTGTGGACTGTACTGCAAGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAACAACGTTAATGAACATAGTAGTCGATCTCATTGGTACCAAGCTAATGCATTTTCCCCATTTCTTTACAATTTCTAGTCTATGAACTATACATCACTGCTAGTTTTTCTTTTTCTATACTTACCGATAATTACTACTTGTTTCTTATTCAGCATGCTATGTATAATGGTAAAGACTAAAAATTTGATGAATGGTGAGTGTACCAAGAGCAAACTTTGGCTTGTGGATTTGGCAGGCAGTGAGAGACTTGCAAAGACTGACGTGCAAGGAGAGCGACTTAAGGAGGCACAGAATATTAACCGATCTCTTTCTGCTCTTGGAGATGTGATATCCGCTTTAGCTGCAAAAAGTAGTCACATTCCTTATAGGTATACCTATTAATTACTCTTTACTGTCACGGTGTCACCAATCTTGATATGTAAATGTTAGTTTCATCAATGCTATTTTTTTTGGATATTTCAGGAATTCTAAATTGACACATTTACTCCAAGACTCACTAGGTATGTCTAGCTATTGCCGCTTTCTTTGTGTGTGTTGTTTATTTGTTAGGAGTAAGATCCAGTTTTTGTAGGATTATATTGGTGAAGCTTGTTGCATTGTATGTTTGTATCATATTGCAGGAGGTGACTCAAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGATGTCGGTGAGACTCTGAGCTCACTTAACTTTGCAACTAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAGGCGAACTTCAAAAGACAAAAGCAATGGTAGGTTGCTGATCCTTACTAAAACGTATTAAATTTATCTCCTCATGCCTTATGAACAATTTATGATGAATTCTTCCTTATACACTTTGGCATAGCTTGACAAAGCACGAAGTGAGTGCAGAAGTAAAGAAGAATCCTTGAGGAAATTAGAAGAAAGCTTGCAAAACATTGAGAGTAAGGCCAAGGGAAAGGATAATATCCACAAAAATCTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCATGCAAAATCAATCAGAGAAACAAGTTTCTCAATTATGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTTCAACATAAGGTTGTTTTCTAATTCGAGATTATTATTTGACTTGTGGCTCATCTATAATTTTTTTAGCAACATTGGATGTGTATCATGGTTTTGGTCTTGTAGTTTATAAACTGCAAATTTCATTTAAAGTTTTTCACAAATGCACGTATTACAAATGATAGCTAGTGTTTGAAGATATAGTTATAAATAAGTAGCATTGGTTCCTTGCTTTTGTTATTGGGTGGGTCATTTGACATTCATATCTAACAAGACACATGCTTATATTGAAGGTCAAAGAGCTAGAGAGAAAAATAAAAGAACAACTGCAGACAGAGACAGCAAATTTCCAACAGAAGGTTTGTAACACATTTGCAAAACTGCTTCCTCCACTCTTCTCTAATTCTTTATTCTTGCCAAAACCTTAGCATGAAGAACATGCAATCATAAGATGCATATATTGGAGAAAAGTTTATCCTTCTTTGTTTGACTGAAACAATTAGTTTGGTCTGAAAAAAAAAAGTTAAGTCAGTTCTTGTATGTTATTGCAGGTTTGGGATCTAGAAAAGAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAATCTTCCTTTCTAAAAGATAAGGTTGTCAAGCACTAGAATTGCTCATGTAGTGCGATATTCTTTGCCGTTGTTATGGGATATTTTGAGTGACCTCTTTTTATGTTCATCGCTTCATATTATTTAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAGCAGAACTCGGAATCCTTGCTAAAACAACAGGTACTAATTTGTTTCTGTTGCACACTACATTTGAAATGTTCGATAACAGTCATTACAAGCTTATCACGAGTGAAGTGGAGTAATAGTAATAATAGTCTAATATGTCTAAATCTCCCCTCCATACATTGAAAAGGAGTACTATGTTTAATTTTTACCATTTTCTATCTGGCATCTTTGAGTGAGTTGTTTAATGTATATTAATTAATAATTCACGTGGCAACATGTGTCATGGCAGATGAAGGAACTAGAGGAGAAATACAAAGAGCGAGAGCAACAGTGGCAGCAAACTCACTGTTATGTTGAAGCCGTAAAGGTGGCGGCCACACCTGATATAGGTAAAAGCCGCACAAGTGATGAATCTCCAAATGATATTGAGAGTCGCATTTTATGTAGTTCAAACTCGGTAAACCGCCAGATAAGTCAAGGTTCTGCTTTGTTAAAAGGGACTGATTCTACTCAGCAGATGAGAAACAAAAGGCAGTTAAGAAGCAATGACATTGAGAACAATTTAGTCGGGCCACCGTCATCCACTTTACGTGATAGAAAAATGACAAGGAAATCTGATCCGCCTAAAATTGTAAGAACTGGTAGGCTAACAACAAAACCGCCGGTCATTACTAGTCAAGTTCCTTTATCTCATAAGAGAGCTAGCACAAGCAGAGATCAGGCTCAAGGAGTTAAAGAGAGGGATAGTAAGAAAAAGATATGGTCAAGATAG

Protein sequence

>MS.gene069140.t1

MEPIQSNEFHNDPQTLIPNQQEDSVMEDANDSLFDSMLVDSSSKLIQNGFTRSQNSAEECVMFVNAGGEATNEGADGVNFLSDTFFDGGNVFRTNEAIVEGGDYPSIYQSARVGSFSYRIDNLPPGQYLVDLHFVEIINVNGPKGMRVFNVYIQEEKVLSELDIYAAVGVNKPLQLIDCRATVKDDGVILIRFESLNGSPVVSGICIRRATKESVPPVPSDFIECNYCAAQIEIPSSQIKVMQTKSTAKYENKIKELTMQCELKAKECYEAWTSLTEMSRKMEKVQMELDQVTFKSLTTEQTAEKQAENLRSISNRYELDKKKWAEAIISLQEKVKLMKSEQSRLSFEAHECVDSIPELNKMVYAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSAGCTTVVDFDAAKDGCLGILATGSSKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTGELQKTKAMLDKARSECRSKEESLRKLEESLQNIESKAKGKDNIHKNLQEKIKELEGQIELKTSMQNQSEKQVSQLCEKLKGKEETCCTLQHKVKELERKIKEQLQTETANFQQKVWDLEKKLKDQLQGSESESSFLKDKIKELERKLKEQEQNSESLLKQQMKELEEKYKEREQQWQQTHCYVEAVKVAATPDIGKSRTSDESPNDIESRILCSSNSVNRQISQGSALLKGTDSTQQMRNKRQLRSNDIENNLVGPPSSTLRDRKMTRKSDPPKIVRTGRLTTKPPVITSQVPLSHKRASTSRDQAQGVKERDSKKKIWSR