Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069346.t1 | KEH21484.1 | 98.1 | 213 | 4 | 0 | 2 | 214 | 12 | 224 | 7.90E-116 | 426.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069346.t1 | Q3UDW8 | 30.6 | 222 | 120 | 9 | 3 | 208 | 274 | 477 | 1.1e-14 | 81.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069346.t1 | A0A072TVF5 | 98.1 | 213 | 4 | 0 | 2 | 214 | 12 | 224 | 5.7e-116 | 426.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050464 | MS.gene069346 | 0.801583 | 8.41E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene069346 | 0.806611 | 7.56E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene069346 | 0.822204 | 2.68E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene069346 | 0.82377 | 1.16E-53 | -1.69E-46 |
| MS.gene052134 | MS.gene069346 | 0.80642 | 8.30E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene069346 | 0.818793 | 1.63E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene069346 | 0.821002 | 5.09E-53 | -1.69E-46 |
| MS.gene052758 | MS.gene069346 | 0.802644 | 5.09E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene069346 | 0.801961 | 7.03E-49 | -1.69E-46 |
| MS.gene054918 | MS.gene069346 | 0.856117 | 4.00E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene069346 | 0.817162 | 3.80E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene069346 | 0.837798 | 4.20E-57 | -1.69E-46 |
| MS.gene056337 | MS.gene069346 | 0.811964 | 5.38E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene069346 | -0.805987 | 1.02E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene069346 | 0.820797 | 5.67E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene069346 | 0.818409 | 1.99E-52 | -1.69E-46 |
| MS.gene057825 | MS.gene069346 | 0.824941 | 6.14E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene069346 | 0.839013 | 2.04E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene069346 | 0.832601 | 8.62E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene069346 | 0.83299 | 6.90E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene069346 | 0.813116 | 3.01E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene069346 | -0.820678 | 6.04E-53 | -1.69E-46 |
| MS.gene061159 | MS.gene069346 | 0.857225 | 1.89E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069346.t1 | MTR_7g406840 | 98.122 | 213 | 4 | 0 | 2 | 214 | 12 | 224 | 1.40e-152 | 429 |
| MS.gene069346.t1 | MTR_3g117990 | 46.512 | 215 | 106 | 3 | 3 | 210 | 33 | 245 | 2.45e-68 | 211 |
| MS.gene069346.t1 | MTR_3g117990 | 46.512 | 215 | 106 | 3 | 3 | 210 | 33 | 245 | 2.16e-67 | 211 |
| MS.gene069346.t1 | MTR_1g087750 | 51.402 | 214 | 101 | 2 | 3 | 213 | 58 | 271 | 2.58e-67 | 214 |
| MS.gene069346.t1 | MTR_3g117990 | 46.512 | 215 | 106 | 3 | 3 | 210 | 33 | 245 | 2.81e-67 | 213 |
| MS.gene069346.t1 | MTR_7g112720 | 50.000 | 218 | 104 | 2 | 1 | 213 | 42 | 259 | 4.64e-63 | 203 |
| MS.gene069346.t1 | MTR_7g102840 | 48.357 | 213 | 106 | 3 | 3 | 212 | 75 | 286 | 1.14e-61 | 201 |
| MS.gene069346.t1 | MTR_1g087750 | 43.346 | 263 | 97 | 4 | 3 | 213 | 58 | 320 | 4.56e-61 | 199 |
| MS.gene069346.t1 | MTR_1g062970 | 50.935 | 214 | 98 | 5 | 3 | 212 | 78 | 288 | 4.67e-61 | 197 |
| MS.gene069346.t1 | MTR_7g102870 | 47.642 | 212 | 106 | 4 | 3 | 210 | 76 | 286 | 3.11e-60 | 196 |
| MS.gene069346.t1 | MTR_7g112720 | 44.531 | 128 | 66 | 2 | 91 | 213 | 1 | 128 | 8.23e-29 | 110 |
| MS.gene069346.t1 | MTR_6g045583 | 49.412 | 85 | 20 | 2 | 52 | 130 | 22 | 89 | 5.12e-13 | 66.2 |
| MS.gene069346.t1 | MTR_5g049870 | 49.412 | 85 | 20 | 2 | 52 | 130 | 22 | 89 | 6.28e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069346.t1 | AT5G47900 | 63.679 | 212 | 76 | 1 | 3 | 213 | 59 | 270 | 2.85e-94 | 277 |
| MS.gene069346.t1 | AT5G47900 | 62.326 | 215 | 77 | 1 | 3 | 213 | 59 | 273 | 1.45e-93 | 276 |
| MS.gene069346.t1 | AT5G47900 | 62.326 | 215 | 77 | 1 | 3 | 213 | 59 | 273 | 1.25e-91 | 273 |
| MS.gene069346.t1 | AT5G47900 | 62.326 | 215 | 77 | 1 | 3 | 213 | 59 | 273 | 3.04e-91 | 273 |
| MS.gene069346.t1 | AT5G47900 | 62.617 | 214 | 76 | 1 | 4 | 213 | 1 | 214 | 3.08e-91 | 273 |
| MS.gene069346.t1 | AT5G47900 | 62.326 | 215 | 77 | 1 | 3 | 213 | 59 | 273 | 1.02e-90 | 273 |
| MS.gene069346.t1 | AT5G47900 | 62.326 | 215 | 77 | 1 | 3 | 213 | 59 | 273 | 1.61e-90 | 273 |
| MS.gene069346.t1 | AT5G47900 | 62.326 | 215 | 77 | 1 | 3 | 213 | 59 | 273 | 1.61e-90 | 273 |
| MS.gene069346.t1 | AT5G47900 | 62.326 | 215 | 77 | 1 | 3 | 213 | 53 | 267 | 1.87e-90 | 272 |
| MS.gene069346.t1 | AT5G27730 | 49.770 | 217 | 105 | 2 | 1 | 213 | 48 | 264 | 1.76e-68 | 214 |
| MS.gene069346.t1 | AT5G27730 | 49.770 | 217 | 105 | 2 | 1 | 213 | 48 | 264 | 2.79e-68 | 214 |
| MS.gene069346.t1 | AT5G27730 | 49.770 | 217 | 105 | 2 | 1 | 213 | 48 | 264 | 2.08e-67 | 214 |
| MS.gene069346.t1 | AT5G47900 | 59.877 | 162 | 61 | 1 | 56 | 213 | 12 | 173 | 1.17e-59 | 191 |
| MS.gene069346.t1 | AT5G27730 | 44.000 | 175 | 94 | 2 | 43 | 213 | 9 | 183 | 1.82e-43 | 148 |
| MS.gene069346.t1 | AT5G27730 | 44.000 | 175 | 94 | 2 | 43 | 213 | 9 | 183 | 8.80e-43 | 148 |
| MS.gene069346.t1 | AT5G47900 | 56.180 | 89 | 35 | 1 | 129 | 213 | 1 | 89 | 2.76e-32 | 117 |
Find 47 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACAGCTCTCTGTGAAATT+TGG | 0.205026 | 7.1:-87481514 | MS.gene069346:CDS |
| CGTGAAGATATCGTTAATTC+TGG | 0.293626 | 7.1:-87481485 | MS.gene069346:CDS |
| ATTTATCTTTGCTTGCTGTA+TGG | 0.319433 | 7.1:-87481128 | MS.gene069346:CDS |
| GCGCTTAAGCTTCTTGCATT+AGG | 0.338601 | 7.1:-87482131 | MS.gene069346:CDS |
| GATCATTCCAACGGCATTGC+AGG | 0.354817 | 7.1:+87480879 | None:intergenic |
| CGCGTTAGTGATTTGACGTT+CGG | 0.380117 | 7.1:-87481701 | MS.gene069346:CDS |
| TTTATCTTTGCTTGCTGTAT+GGG | 0.383070 | 7.1:-87481127 | MS.gene069346:CDS |
| TTTGAAGCAGATAAGATTGA+TGG | 0.388539 | 7.1:-87481672 | MS.gene069346:CDS |
| GATATCGATACTTTCTCAAA+AGG | 0.392446 | 7.1:+87481456 | None:intergenic |
| ACAGGCGTCCGTGCATATAT+TGG | 0.402913 | 7.1:+87480817 | None:intergenic |
| ACTCATGCAGCTTATGATAT+TGG | 0.408037 | 7.1:-87482510 | None:intergenic |
| ACACTCACAGAAAATTTCAT+AGG | 0.413861 | 7.1:+87481053 | None:intergenic |
| ATGATCGATCGTAGCTTGTT+GGG | 0.449187 | 7.1:-87480862 | MS.gene069346:CDS |
| TGGGATGTACGTTCCCGATT+GGG | 0.453793 | 7.1:-87481108 | MS.gene069346:CDS |
| AATGATCGATCGTAGCTTGT+TGG | 0.458059 | 7.1:-87480863 | MS.gene069346:CDS |
| AATTTCATAGGTTCTGAAGA+AGG | 0.469705 | 7.1:+87481065 | None:intergenic |
| GTCGCATCAACTTTGCAAGA+TGG | 0.475648 | 7.1:+87482173 | None:intergenic |
| TGAGAAAGTATCGATATCAA+TGG | 0.477114 | 7.1:-87481451 | MS.gene069346:intron |
| ATGATATTGGTGGATGATGC+TGG | 0.492588 | 7.1:-87482497 | MS.gene069346:CDS |
| ATATCGATACTTTCTCAAAA+GGG | 0.495414 | 7.1:+87481457 | None:intergenic |
| ATGGGATGTACGTTCCCGAT+TGG | 0.499827 | 7.1:-87481109 | MS.gene069346:CDS |
| GGTTCTGAAGAAGGTTCTGT+TGG | 0.504371 | 7.1:+87481074 | None:intergenic |
| TGGAACTTCATACTCCCAAT+CGG | 0.507436 | 7.1:+87481094 | None:intergenic |
| TGGGTTTACAACATCTATAC+CGG | 0.509722 | 7.1:-87480843 | MS.gene069346:CDS |
| CAAAGTTGATGCGACTAGAA+AGG | 0.510229 | 7.1:-87482165 | MS.gene069346:CDS |
| GCTATTGTTAAACCATTCCA+TGG | 0.518565 | 7.1:+87482446 | None:intergenic |
| CTCAATCATTCTCCATGGAA+TGG | 0.518820 | 7.1:-87482458 | MS.gene069346:CDS |
| ATTCCAACGGCATTGCAGGC+TGG | 0.546834 | 7.1:+87480883 | None:intergenic |
| AAGATTGATGGGAATACTGC+AGG | 0.547002 | 7.1:-87481660 | MS.gene069346:intron |
| TTGAAGCAGATAAGATTGAT+GGG | 0.548455 | 7.1:-87481671 | MS.gene069346:CDS |
| CATGGAGAATGATTGAGTGC+TGG | 0.551745 | 7.1:+87482464 | None:intergenic |
| GGACCAGCCTGCAATGCCGT+TGG | 0.557668 | 7.1:-87480886 | MS.gene069346:CDS |
| TGTGGAGTAAGAGGCGACAC+TGG | 0.561390 | 7.1:-87480907 | MS.gene069346:CDS |
| TAGGTTAAATGTGGAGTAAG+AGG | 0.567721 | 7.1:-87480916 | MS.gene069346:CDS |
| GGAACTTCATACTCCCAATC+GGG | 0.571048 | 7.1:+87481095 | None:intergenic |
| CCAAGAGTATAGGATCATAC+AGG | 0.577262 | 7.1:+87480799 | None:intergenic |
| CATGCAGCTTATGATATTGG+TGG | 0.582042 | 7.1:-87482507 | MS.gene069346:CDS |
| CAGCACTCAATCATTCTCCA+TGG | 0.586892 | 7.1:-87482463 | MS.gene069346:CDS |
| TAGTGATTTGACGTTCGGAG+TGG | 0.588639 | 7.1:-87481696 | MS.gene069346:CDS |
| TCCGTGCATATATTGGTCTC+CGG | 0.602215 | 7.1:+87480824 | None:intergenic |
| TGCACTAGCATTCACATACA+AGG | 0.605009 | 7.1:-87482384 | MS.gene069346:intron |
| CATTGGATGTCAGAGAATTG+CGG | 0.615658 | 7.1:-87481549 | MS.gene069346:intron |
| AACATGTGTTAGGTTAAATG+TGG | 0.637640 | 7.1:-87480925 | MS.gene069346:intron |
| ACCGGAGACCAATATATGCA+CGG | 0.656923 | 7.1:-87480825 | MS.gene069346:CDS |
| AGTTGATGCGACTAGAAAGG+CGG | 0.689224 | 7.1:-87482162 | MS.gene069346:CDS |
| ATATTGGTGGATGATGCTGG+TGG | 0.716550 | 7.1:-87482494 | MS.gene069346:CDS |
| GCTACGATCGATCATTCCAA+CGG | 0.717667 | 7.1:+87480870 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATTATTTATTTATTTCAT+TGG | - | chr7.1:87481753-87481772 | MS.gene069346:intron | 10.0% |
| !! | TATCATAAAAGTTTATGTAT+AGG | + | chr7.1:87482013-87482032 | None:intergenic | 15.0% |
| !!! | ATTATTTTTTTGAATGTAAC+AGG | - | chr7.1:87482144-87482163 | MS.gene069346:CDS | 15.0% |
| !!! | CAATTTAACTTCTTATATAA+TGG | - | chr7.1:87482343-87482362 | MS.gene069346:intron | 15.0% |
| !!! | TTATTTTTTTGAATGTAACA+GGG | - | chr7.1:87482145-87482164 | MS.gene069346:CDS | 15.0% |
| !! | ATGAATTTAAACTTCCAAAT+AGG | + | chr7.1:87482314-87482333 | None:intergenic | 20.0% |
| !! | CCAACAATAAAAAGAAAAAA+TGG | + | chr7.1:87480912-87480931 | None:intergenic | 20.0% |
| !! | CTATATCATAAGATAAAACA+AGG | + | chr7.1:87481984-87482003 | None:intergenic | 20.0% |
| !! | TTTCACAAAATTTAAGCAAA+AGG | + | chr7.1:87481240-87481259 | None:intergenic | 20.0% |
| !!! | CCATTTTTTCTTTTTATTGT+TGG | - | chr7.1:87480909-87480928 | MS.gene069346:CDS | 20.0% |
| !!! | GAGTTTTAGTTTCTTAATAT+AGG | - | chr7.1:87481910-87481929 | MS.gene069346:intron | 20.0% |
| ! | ATATCGATACTTTCTCAAAA+GGG | + | chr7.1:87481865-87481884 | None:intergenic | 25.0% |
| ! | TTAAAGTAAAATGTTGGTGT+TGG | - | chr7.1:87481322-87481341 | MS.gene069346:intron | 25.0% |
| ! | TTCTGTTGAAGAAACAAATA+AGG | + | chr7.1:87481125-87481144 | None:intergenic | 25.0% |
| !! | AAGGTGTTAAAGTAAAATGT+TGG | - | chr7.1:87481316-87481335 | MS.gene069346:intron | 25.0% |
| !! | AATGAAGTTCTAACTTCATA+GGG | + | chr7.1:87481697-87481716 | None:intergenic | 25.0% |
| !! | TTTACATTTTCACACCTATT+TGG | - | chr7.1:87482297-87482316 | MS.gene069346:intron | 25.0% |
| !!! | TATTGCATTTTGTTGTTCAT+AGG | - | chr7.1:87481582-87481601 | MS.gene069346:intron | 25.0% |
| !!! | TCTTTTTTTGATGAATGTCA+AGG | - | chr7.1:87481297-87481316 | MS.gene069346:intron | 25.0% |
| !!! | TGTTATTTCACAACATATAC+AGG | + | chr7.1:87481365-87481384 | None:intergenic | 25.0% |
| AAAAGCAACATCACATAACT+AGG | + | chr7.1:87482079-87482098 | None:intergenic | 30.0% | |
| AACATGTGTTAGGTTAAATG+TGG | - | chr7.1:87482394-87482413 | MS.gene069346:CDS | 30.0% | |
| AATGCAATACGTTACATACA+TGG | + | chr7.1:87481571-87481590 | None:intergenic | 30.0% | |
| ACACTCACAGAAAATTTCAT+AGG | + | chr7.1:87482269-87482288 | None:intergenic | 30.0% | |
| ATAGTGTATCACAAAACAAC+AGG | + | chr7.1:87481432-87481451 | None:intergenic | 30.0% | |
| ATTTAAGCAAAAGGTTCAGT+TGG | + | chr7.1:87481231-87481250 | None:intergenic | 30.0% | |
| GATATCGATACTTTCTCAAA+AGG | + | chr7.1:87481866-87481885 | None:intergenic | 30.0% | |
| TAGTGTATCACAAAACAACA+GGG | + | chr7.1:87481431-87481450 | None:intergenic | 30.0% | |
| TATCTATCTGAACATGTGTT+AGG | - | chr7.1:87482384-87482403 | MS.gene069346:intron | 30.0% | |
| TTGAAGCAGATAAGATTGAT+GGG | - | chr7.1:87481648-87481667 | MS.gene069346:intron | 30.0% | |
| TTGTGAAATAACAGCTATAG+TGG | - | chr7.1:87481372-87481391 | MS.gene069346:intron | 30.0% | |
| ! | CAATGAAGTTCTAACTTCAT+AGG | + | chr7.1:87481698-87481717 | None:intergenic | 30.0% |
| ! | TTTGAAGCAGATAAGATTGA+TGG | - | chr7.1:87481647-87481666 | MS.gene069346:intron | 30.0% |
| !! | AATTTCATAGGTTCTGAAGA+AGG | + | chr7.1:87482257-87482276 | None:intergenic | 30.0% |
| !! | ATTTATCTTTGCTTGCTGTA+TGG | - | chr7.1:87482191-87482210 | MS.gene069346:intron | 30.0% |
| !! | TGAGAAAGTATCGATATCAA+TGG | - | chr7.1:87481868-87481887 | MS.gene069346:intron | 30.0% |
| !! | TTTATCTTTGCTTGCTGTAT+GGG | - | chr7.1:87482192-87482211 | MS.gene069346:intron | 30.0% |
| CGATCTGTGATTGACAAAAT+TGG | - | chr7.1:87481537-87481556 | MS.gene069346:CDS | 35.0% | |
| CGTGAAGATATCGTTAATTC+TGG | - | chr7.1:87481834-87481853 | MS.gene069346:intron | 35.0% | |
| GACTTGAGACACAAGTTAAA+GGG | + | chr7.1:87482102-87482121 | None:intergenic | 35.0% | |
| GCTATTGTTAAACCATTCCA+TGG | + | chr7.1:87480876-87480895 | None:intergenic | 35.0% | |
| TAGGTTAAATGTGGAGTAAG+AGG | - | chr7.1:87482403-87482422 | MS.gene069346:CDS | 35.0% | |
| TGACTTGAGACACAAGTTAA+AGG | + | chr7.1:87482103-87482122 | None:intergenic | 35.0% | |
| TGGGTTTACAACATCTATAC+CGG | - | chr7.1:87482476-87482495 | MS.gene069346:CDS | 35.0% | |
| TTACAGCTCTCTGTGAAATT+TGG | - | chr7.1:87481805-87481824 | MS.gene069346:intron | 35.0% | |
| ! | GCATTAGGCATTTTTCTTCA+AGG | - | chr7.1:87481203-87481222 | MS.gene069346:intron | 35.0% |
| ! | TTTTGAATGTAACAGGGCTT+TGG | - | chr7.1:87482151-87482170 | MS.gene069346:CDS | 35.0% |
| !! | TTAACTTGTGTCTCAAGTCA+TGG | - | chr7.1:87482103-87482122 | MS.gene069346:intron | 35.0% |
| !!! | TGCATTTTGTTGTTCATAGG+AGG | - | chr7.1:87481585-87481604 | MS.gene069346:intron | 35.0% |
| AAGATTGATGGGAATACTGC+AGG | - | chr7.1:87481659-87481678 | MS.gene069346:intron | 40.0% | |
| CATTGGATGTCAGAGAATTG+CGG | - | chr7.1:87481770-87481789 | MS.gene069346:intron | 40.0% | |
| CTCAATCATTCTCCATGGAA+TGG | - | chr7.1:87480861-87480880 | MS.gene069346:CDS | 40.0% | |
| GCTATAGCAGTGTAACATAC+TGG | - | chr7.1:87481489-87481508 | MS.gene069346:CDS | 40.0% | |
| TCACAGATCGCGTAAATTGA+CGG | + | chr7.1:87481527-87481546 | None:intergenic | 40.0% | |
| TGCACTAGCATTCACATACA+AGG | - | chr7.1:87480935-87480954 | MS.gene069346:intron | 40.0% | |
| TGGAACTTCATACTCCCAAT+CGG | + | chr7.1:87482228-87482247 | None:intergenic | 40.0% | |
| ! | AATGATCGATCGTAGCTTGT+TGG | - | chr7.1:87482456-87482475 | MS.gene069346:CDS | 40.0% |
| ! | ATGATATTGGTGGATGATGC+TGG | - | chr7.1:87480822-87480841 | MS.gene069346:CDS | 40.0% |
| !! | ATGATCGATCGTAGCTTGTT+GGG | - | chr7.1:87482457-87482476 | MS.gene069346:CDS | 40.0% |
| !! | CAAAGTTGATGCGACTAGAA+AGG | - | chr7.1:87481154-87481173 | MS.gene069346:CDS | 40.0% |
| ACCGGAGACCAATATATGCA+CGG | - | chr7.1:87482494-87482513 | MS.gene069346:CDS | 45.0% | |
| CAGCACTCAATCATTCTCCA+TGG | - | chr7.1:87480856-87480875 | MS.gene069346:CDS | 45.0% | |
| CATGGAGAATGATTGAGTGC+TGG | + | chr7.1:87480858-87480877 | None:intergenic | 45.0% | |
| CGCGTTAGTGATTTGACGTT+CGG | - | chr7.1:87481618-87481637 | MS.gene069346:intron | 45.0% | |
| GCGCTTAAGCTTCTTGCATT+AGG | - | chr7.1:87481188-87481207 | MS.gene069346:intron | 45.0% | |
| GCTACGATCGATCATTCCAA+CGG | + | chr7.1:87482452-87482471 | None:intergenic | 45.0% | |
| GGAACTTCATACTCCCAATC+GGG | + | chr7.1:87482227-87482246 | None:intergenic | 45.0% | |
| GTCGCATCAACTTTGCAAGA+TGG | + | chr7.1:87481149-87481168 | None:intergenic | 45.0% | |
| TAGTGATTTGACGTTCGGAG+TGG | - | chr7.1:87481623-87481642 | MS.gene069346:intron | 45.0% | |
| ! | AGTTGATGCGACTAGAAAGG+CGG | - | chr7.1:87481157-87481176 | MS.gene069346:intron | 45.0% |
| ! | ATATTGGTGGATGATGCTGG+TGG | - | chr7.1:87480825-87480844 | MS.gene069346:CDS | 45.0% |
| ! | CGACTAGAAAGGCGGTTTTA+CGG | - | chr7.1:87481165-87481184 | MS.gene069346:intron | 45.0% |
| ! | GACTAGAAAGGCGGTTTTAC+GGG | - | chr7.1:87481166-87481185 | MS.gene069346:intron | 45.0% |
| ! | TCCGTGCATATATTGGTCTC+CGG | + | chr7.1:87482498-87482517 | None:intergenic | 45.0% |
| !! | GGTTCTGAAGAAGGTTCTGT+TGG | + | chr7.1:87482248-87482267 | None:intergenic | 45.0% |
| ACAGGCGTCCGTGCATATAT+TGG | + | chr7.1:87482505-87482524 | None:intergenic | 50.0% | |
| ATGGGATGTACGTTCCCGAT+TGG | - | chr7.1:87482210-87482229 | MS.gene069346:intron | 50.0% | |
| GATCATTCCAACGGCATTGC+AGG | + | chr7.1:87482443-87482462 | None:intergenic | 50.0% | |
| TGGGATGTACGTTCCCGATT+GGG | - | chr7.1:87482211-87482230 | MS.gene069346:intron | 50.0% | |
| ATTCCAACGGCATTGCAGGC+TGG | + | chr7.1:87482439-87482458 | None:intergenic | 55.0% | |
| TGTGGAGTAAGAGGCGACAC+TGG | - | chr7.1:87482412-87482431 | MS.gene069346:CDS | 55.0% | |
| GGACCAGCCTGCAATGCCGT+TGG | - | chr7.1:87482433-87482452 | MS.gene069346:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 87480813 | 87482528 | 87480813 | ID=MS.gene069346 |
| chr7.1 | mRNA | 87480813 | 87482528 | 87480813 | ID=MS.gene069346.t1;Parent=MS.gene069346 |
| chr7.1 | exon | 87482385 | 87482528 | 87482385 | ID=MS.gene069346.t1.exon1;Parent=MS.gene069346.t1 |
| chr7.1 | CDS | 87482385 | 87482528 | 87482385 | ID=cds.MS.gene069346.t1;Parent=MS.gene069346.t1 |
| chr7.1 | exon | 87482117 | 87482198 | 87482117 | ID=MS.gene069346.t1.exon2;Parent=MS.gene069346.t1 |
| chr7.1 | CDS | 87482117 | 87482198 | 87482117 | ID=cds.MS.gene069346.t1;Parent=MS.gene069346.t1 |
| chr7.1 | exon | 87481661 | 87481737 | 87481661 | ID=MS.gene069346.t1.exon3;Parent=MS.gene069346.t1 |
| chr7.1 | CDS | 87481661 | 87481737 | 87481661 | ID=cds.MS.gene069346.t1;Parent=MS.gene069346.t1 |
| chr7.1 | exon | 87481452 | 87481558 | 87481452 | ID=MS.gene069346.t1.exon4;Parent=MS.gene069346.t1 |
| chr7.1 | CDS | 87481452 | 87481558 | 87481452 | ID=cds.MS.gene069346.t1;Parent=MS.gene069346.t1 |
| chr7.1 | exon | 87481061 | 87481175 | 87481061 | ID=MS.gene069346.t1.exon5;Parent=MS.gene069346.t1 |
| chr7.1 | CDS | 87481061 | 87481175 | 87481061 | ID=cds.MS.gene069346.t1;Parent=MS.gene069346.t1 |
| chr7.1 | exon | 87480813 | 87480935 | 87480813 | ID=MS.gene069346.t1.exon6;Parent=MS.gene069346.t1 |
| chr7.1 | CDS | 87480813 | 87480935 | 87480813 | ID=cds.MS.gene069346.t1;Parent=MS.gene069346.t1 |
| Gene Sequence |
| Protein sequence |
