AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070665

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070665.t1 MTR_2g041270 93.313 658 13 1 1 658 1 627 0.0 1259
MS.gene070665.t1 MTR_3g047950 72.258 465 114 3 203 655 121 582 0.0 699
MS.gene070665.t1 MTR_3g047950 61.983 121 46 0 1 121 1 121 3.46e-38 152
MS.gene070665.t1 MTR_4g109580 36.207 464 274 7 206 655 159 614 2.04e-93 301
MS.gene070665.t1 MTR_4g109580 38.500 400 224 7 206 591 159 550 1.19e-84 276
MS.gene070665.t1 MTR_4g109590 26.923 286 162 8 383 657 18 267 1.02e-22 98.6
MS.gene070665.t1 MTR_5g027390 24.932 369 230 15 237 587 23 362 2.76e-16 82.4
MS.gene070665.t1 MTR_4g070090 25.074 339 219 13 266 587 74 394 1.56e-15 80.1
MS.gene070665.t1 MTR_5g026880 34.400 125 71 2 1 125 1 114 9.82e-15 72.0
MS.gene070665.t1 MTR_6g052340 28.708 209 135 8 254 452 42 246 2.63e-14 76.6
MS.gene070665.t1 MTR_5g078250 24.797 246 166 7 254 486 46 285 1.15e-11 68.2
MS.gene070665.t1 MTR_8g479260 19.895 382 260 14 225 587 20 374 2.27e-11 67.4
MS.gene070665.t1 MTR_6g039240 22.330 309 193 11 215 504 8 288 4.87e-11 64.7
MS.gene070665.t1 MTR_4g036240 22.146 438 306 16 214 639 7 421 5.70e-11 65.9
MS.gene070665.t1 MTR_2g008650 19.634 382 261 14 225 587 20 374 6.11e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070665.t1 AT2G06510 67.023 655 200 4 1 654 1 640 0.0 903
MS.gene070665.t1 AT2G06510 66.772 632 194 4 24 654 1 617 0.0 874
MS.gene070665.t1 AT4G19130 49.853 682 305 8 1 656 2 672 0.0 682
MS.gene070665.t1 AT4G19130 49.853 682 305 8 1 656 1 671 0.0 682
MS.gene070665.t1 AT5G45400 61.684 475 177 4 184 656 270 741 0.0 643
MS.gene070665.t1 AT5G45400 33.758 157 97 2 1 150 1 157 5.54e-19 92.0
MS.gene070665.t1 AT5G08020 32.584 623 346 14 42 654 41 599 2.52e-102 324
MS.gene070665.t1 AT5G61000 31.065 676 389 17 1 653 1 622 6.36e-96 308
MS.gene070665.t1 AT1G52950 22.045 440 294 14 215 629 10 425 7.42e-16 81.6

Find 184 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTATTATTAATATTTC+TGG 0.129088 2.4:-48924661 None:intergenic
ACCAGCCTTTACTGCTAAAA+TGG 0.144775 2.4:-48925492 None:intergenic
CAGAAATATTAATAATAATT+TGG 0.171665 2.4:+48924662 MS.gene070665:CDS
TGCAGTAACCCTTGCCTTGA+TGG 0.192465 2.4:-48924937 None:intergenic
GGAAGCAGGGGAGGAGATTA+TGG 0.234809 2.4:+48925979 MS.gene070665:CDS
GATTTCACAATCAGGTATTA+TGG 0.235355 2.4:-48924559 None:intergenic
ATGCTATCCTTGATGTTATT+GGG 0.237693 2.4:+48925291 MS.gene070665:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2.4:+48924700 MS.gene070665:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2.4:+48924790 MS.gene070665:CDS
AATGCTATCCTTGATGTTAT+TGG 0.260217 2.4:+48925290 MS.gene070665:CDS
AGCTGCTTTAAATCCCTATC+AGG 0.291739 2.4:+48924905 MS.gene070665:CDS
TTCCTTGTACAGGATTATTA+TGG 0.291986 2.4:+48924521 MS.gene070665:intron
TGCTTCTCTATCCATTTCTA+AGG 0.293301 2.4:+48925637 MS.gene070665:CDS
TTGAATCTAAAGGACAATTC+TGG 0.293961 2.4:+48925383 MS.gene070665:CDS
AACTTGGGTAACTGCTTTCC+AGG 0.306558 2.4:+48925958 MS.gene070665:CDS
TAATCTCCTCCCCTGCTTCC+TGG 0.309445 2.4:-48925976 None:intergenic
GAGTGTTGAGCTAACACTTT+GGG 0.310178 2.4:+48925409 MS.gene070665:CDS
GTCTGAGCCTCAGGGAAATC+TGG 0.314113 2.4:-48925578 None:intergenic
GTTCTTAAGGTCTGAGCCTC+AGG 0.330109 2.4:-48925587 None:intergenic
TTGATCAAACCAGGTTCTTA+AGG 0.331128 2.4:-48925600 None:intergenic
GATGGCCCACCTACCCTGAT+AGG 0.333085 2.4:-48924919 None:intergenic
GCCCTCATTGTTATCCAGTC+TGG 0.338147 2.4:-48925743 None:intergenic
CAGGAGGATGATGAGAAGTT+TGG 0.346761 2.4:+48926040 MS.gene070665:CDS
CAATCACTGCCTACGGAACT+TGG 0.351957 2.4:-48926218 None:intergenic
TCAGGCAATGCTTTCTGAAC+TGG 0.362621 2.4:-48924618 None:intergenic
GGTATAGAACCATCCTCATC+TGG 0.367686 2.4:-48925215 None:intergenic
CTCAAAATGCTGGTAGTAAT+GGG 0.368189 2.4:+48924688 MS.gene070665:CDS
CTCAATGACCGAGTCAATAC+TGG 0.368529 2.4:+48922311 MS.gene070665:CDS
TCAATCATTTGAAGAATGAA+TGG 0.372621 2.4:+48925153 MS.gene070665:CDS
TGCCCATTACTACCAGCATT+TGG 0.378317 2.4:-48924780 None:intergenic
GCTCAAATCCAGGATCATTC+AGG 0.380015 2.4:+48925932 MS.gene070665:CDS
TCTCACCGCAAACGCTATTC+CGG 0.381154 2.4:+48922139 MS.gene070665:CDS
ACAGCTTGCCCTCTGATGAT+TGG 0.387057 2.4:+48925803 MS.gene070665:CDS
GAACCAGCCACAGTGTTATC+AGG 0.387320 2.4:-48924636 None:intergenic
CAAATTAAAGATGAAGATCT+AGG 0.387556 2.4:+48925707 MS.gene070665:CDS
GGGCAAGCTGTGTAACAAAA+TGG 0.387851 2.4:-48925791 None:intergenic
TTTGGGGTGAATTCTGCAAC+AGG 0.396738 2.4:+48925426 MS.gene070665:CDS
GATGAAGATCTAGGGCGTTC+AGG 0.398577 2.4:+48925716 MS.gene070665:CDS
GGTGAAGATTACAGTAGTTA+AGG 0.400983 2.4:+48926144 MS.gene070665:CDS
ATGAGTGATGTCCTTAGAAA+TGG 0.402311 2.4:-48925648 None:intergenic
CTCCAAATGCTGGTAGTAAT+GGG 0.405201 2.4:+48924778 MS.gene070665:CDS
CCAGCCTTTACTGCTAAAAT+GGG 0.406397 2.4:-48925491 None:intergenic
GAACCTGGTTTGATCAAGTT+GGG 0.410401 2.4:+48925606 MS.gene070665:CDS
AGCGGAGGAGGTTGGTATTG+AGG 0.411724 2.4:-48924735 None:intergenic
TCTGAATCCACAAATGACTT+TGG 0.414308 2.4:-48924591 None:intergenic
ATACCTGATTGTGAAATCAT+TGG 0.415649 2.4:+48924564 MS.gene070665:CDS
CTTCAAGAGATGGTGGATGC+TGG 0.419540 2.4:+48925461 MS.gene070665:CDS
AGAACCTGGTTTGATCAAGT+TGG 0.422430 2.4:+48925605 MS.gene070665:CDS
CAATCATTTGAAGAATGAAT+GGG 0.424161 2.4:+48925154 MS.gene070665:CDS
TTCCCAATGATTTCACAATC+AGG 0.429166 2.4:-48924567 None:intergenic
TGGGAATCCAAAGTCATTTG+TGG 0.432048 2.4:+48924584 MS.gene070665:CDS
GGCGTTCAGGCAAGCCAGAC+TGG 0.443599 2.4:+48925729 MS.gene070665:CDS
TCTTCAATGAGTTTGTGTTT+AGG 0.444396 2.4:+48926083 MS.gene070665:CDS
CGAAGTCAGGAGACACAAAA+TGG 0.444863 2.4:+48925852 MS.gene070665:CDS
AGGATCATTCAGGATTAACT+TGG 0.448406 2.4:+48925942 MS.gene070665:CDS
GAAGCAGGGGAGGAGATTAT+GGG 0.448431 2.4:+48925980 MS.gene070665:CDS
ATTCCGATGGAGGTGAAATA+CGG 0.449887 2.4:+48925027 MS.gene070665:CDS
TTCAAGAGATGGTGGATGCT+GGG 0.453587 2.4:+48925462 MS.gene070665:CDS
TTTGATCTCCTTGATTCCGA+TGG 0.453893 2.4:+48925014 MS.gene070665:CDS
GCTCCAAATGCTGGTAGTAA+TGG 0.459212 2.4:+48924777 MS.gene070665:CDS
GAATTCAGTGGAAAGTCTAT+AGG 0.459727 2.4:+48925524 MS.gene070665:CDS
TTTAGCAGTAAAGGCTGGTA+AGG 0.460163 2.4:+48925496 MS.gene070665:CDS
TACCTGATTGTGAAATCATT+GGG 0.460436 2.4:+48924565 MS.gene070665:CDS
TGATTGAAATTCTTCTGTGC+AGG 0.460517 2.4:-48925137 None:intergenic
AATAAGAAAGTGACGAAGTC+AGG 0.461922 2.4:+48925839 MS.gene070665:CDS
GTAACTGCTTTCCAGGAAGC+AGG 0.462729 2.4:+48925965 MS.gene070665:CDS
TAAAGCGGAGGAGGTTGGTA+TGG 0.464313 2.4:-48924828 None:intergenic
TACAGTAGTTAAGGCAGATA+AGG 0.467853 2.4:+48926153 MS.gene070665:CDS
GCGGTGAGATTCACCGCCAT+TGG 0.468725 2.4:-48922125 None:intergenic
GAATGAATGGGAAATTATGC+TGG 0.470378 2.4:+48925166 MS.gene070665:CDS
CCGTTTCTATGAAGCAATTG+AGG 0.474581 2.4:+48925076 MS.gene070665:CDS
AAGGCAAGGGTTACTGCAAA+AGG 0.476738 2.4:+48924942 MS.gene070665:CDS
GTTCCCATCGTAAGGAAGAA+TGG 0.477384 2.4:+48925338 MS.gene070665:CDS
GCTCAAAATGCTGGTAGTAA+TGG 0.484784 2.4:+48924687 MS.gene070665:CDS
TTCGTCACTTTCTTATTGCA+CGG 0.485857 2.4:-48925833 None:intergenic
TGTTGTAAAGCGGAGGAGGT+TGG 0.489573 2.4:-48924743 None:intergenic
AATGATCCTGGATTTGAGCT+TGG 0.492318 2.4:-48925928 None:intergenic
AAGTTAATCCTGAATGATCC+TGG 0.493959 2.4:-48925940 None:intergenic
TAGGGATTTAAAGCAGCTAT+AGG 0.496621 2.4:-48924900 None:intergenic
TTTCACCTCCATCGGAATCA+AGG 0.500395 2.4:-48925022 None:intergenic
TATGCTGGATTTAAATTCAA+CGG 0.500855 2.4:+48925181 MS.gene070665:CDS
TACCCGTATTTCACCTCCAT+CGG 0.501159 2.4:-48925030 None:intergenic
GCTATAGGTATTACACGTGC+TGG 0.503122 2.4:-48924885 None:intergenic
GCTATTCCGGCGATAATCGC+CGG 0.503326 2.4:+48922152 MS.gene070665:CDS
TAGATGCAACCAGGAGTTTG+AGG 0.505007 2.4:+48925883 MS.gene070665:CDS
AATTTGGCTGCTCCAAATGC+TGG 0.507899 2.4:+48924768 MS.gene070665:CDS
TGCTATCCTTGATGTTATTG+GGG 0.509422 2.4:+48925292 MS.gene070665:CDS
AGCGGAGGAGGTTGGTATGG+AGG 0.511425 2.4:-48924825 None:intergenic
GATTATTATGGTGCTTAACA+TGG 0.514700 2.4:+48924533 MS.gene070665:CDS
ATCCTTCAGTTCCCATCGTA+AGG 0.516057 2.4:+48925330 MS.gene070665:CDS
ACGTCGCCGGCGATTATCGC+CGG 0.516823 2.4:-48922158 None:intergenic
TTCTATGAAGCAATTGAGGT+TGG 0.517168 2.4:+48925080 MS.gene070665:CDS
ATTCCATTCTTCCTTACGAT+GGG 0.519102 2.4:-48925341 None:intergenic
ACAGTCTCAATGTCACTGAT+AGG 0.519707 2.4:-48925260 None:intergenic
GATCTCCTTGATTCCGATGG+AGG 0.519739 2.4:+48925017 MS.gene070665:CDS
CGGTTTGGCGTCGACGTCGC+CGG 0.521923 2.4:-48922171 None:intergenic
TATAACAATGCTCGTGGAGA+TGG 0.523700 2.4:+48924978 MS.gene070665:CDS
CGACCTTTGTAAAGCGGAGG+AGG 0.525294 2.4:-48924837 None:intergenic
TCAGGGTAGGTGGGCCATCA+AGG 0.528250 2.4:+48924923 MS.gene070665:CDS
CTGAAGGAGAATTGTTGTCT+AGG 0.528586 2.4:-48925236 None:intergenic
AATTTGGCTGCTCAAAATGC+TGG 0.530811 2.4:+48924678 MS.gene070665:CDS
CATTCCATTCTTCCTTACGA+TGG 0.533999 2.4:-48925342 None:intergenic
GAGCTTTGCCCAGATGAGGA+TGG 0.534821 2.4:+48925206 MS.gene070665:CDS
CCTGGATTTGAGCTTGGAGA+AGG 0.534963 2.4:-48925922 None:intergenic
AATCACATTCCTCAAACTCC+TGG 0.536282 2.4:-48925892 None:intergenic
ATTTCTAAGGACATCACTCA+TGG 0.537700 2.4:+48925650 MS.gene070665:CDS
TATCGCCGGAATAGCGTTTG+CGG 0.537944 2.4:-48922144 None:intergenic
GAGAACTTGAAGTAACGGTT+TGG 0.539039 2.4:-48922186 None:intergenic
GTATGTGTTGAAGTATGAAC+AGG 0.543799 2.4:+48926021 MS.gene070665:CDS
ATGGCCCACCTACCCTGATA+GGG 0.544473 2.4:-48924918 None:intergenic
AAAGTTTACTTGATATCGAA+AGG 0.544592 2.4:+48925104 MS.gene070665:CDS
TAAATCCCTATCAGGGTAGG+TGG 0.547460 2.4:+48924913 MS.gene070665:CDS
GTAGGTGGGCCATCAAGGCA+AGG 0.549490 2.4:+48924928 MS.gene070665:CDS
TTCCTTACGATGGGAACTGA+AGG 0.549709 2.4:-48925332 None:intergenic
TGGTATTGAGGTTGAACTGT+TGG 0.550725 2.4:-48924723 None:intergenic
TTTCCCAACTTGATCAAACC+AGG 0.553038 2.4:-48925609 None:intergenic
AGGCTCAGACCTTAAGAACC+TGG 0.553217 2.4:+48925591 MS.gene070665:CDS
CTTTGTAAAGCGGAGGAGGT+TGG 0.553943 2.4:-48924833 None:intergenic
AGAGTGTTGAGCTAACACTT+TGG 0.559856 2.4:+48925408 MS.gene070665:CDS
TGGAATGGAAACACTGAGAA+GGG 0.560059 2.4:+48925358 MS.gene070665:CDS
CGCCGCTATAACAATGCTCG+TGG 0.561907 2.4:+48924972 MS.gene070665:CDS
CCTTCTCCAAGCTCAAATCC+AGG 0.562294 2.4:+48925922 MS.gene070665:CDS
CCTCAATTGCTTCATAGAAA+CGG 0.565250 2.4:-48925076 None:intergenic
CATCGTAAGGAAGAATGGAA+TGG 0.565891 2.4:+48925343 MS.gene070665:CDS
ATGGAATGGAAACACTGAGA+AGG 0.567325 2.4:+48925357 MS.gene070665:CDS
TGCTTTCCAGGAAGCAGGGG+AGG 0.568330 2.4:+48925970 MS.gene070665:CDS
CCTCCGCTTTACAAAGGTCG+TGG 0.571787 2.4:+48924840 MS.gene070665:CDS
TTGCCTGATAACACTGTGGC+TGG 0.572437 2.4:+48924633 MS.gene070665:CDS
TAACTGCTTTCCAGGAAGCA+GGG 0.573726 2.4:+48925966 MS.gene070665:CDS
TCAAGAGATGGTGGATGCTG+GGG 0.574359 2.4:+48925463 MS.gene070665:CDS
AAATTAAAGATGAAGATCTA+GGG 0.575955 2.4:+48925708 MS.gene070665:CDS
GGTTGAGCTTTGCCCAGATG+AGG 0.577862 2.4:+48925202 MS.gene070665:CDS
GCTGCTTTAAATCCCTATCA+GGG 0.580315 2.4:+48924906 MS.gene070665:CDS
TGGTATGGAGGTTGAACTGT+TGG 0.582038 2.4:-48924813 None:intergenic
ATGTCGAGAACTTGAAGTAA+CGG 0.582274 2.4:-48922191 None:intergenic
CAAGCTACAATCACTGCCTA+CGG 0.586389 2.4:-48926225 None:intergenic
GTATAGAACCATCCTCATCT+GGG 0.586999 2.4:-48925214 None:intergenic
AATGTCACTGATAGGTCTGA+AGG 0.587612 2.4:-48925252 None:intergenic
ATTATATAATGACGAACAGA+AGG 0.587920 2.4:+48926123 MS.gene070665:CDS
TTTCTAAGGACATCACTCAT+GGG 0.588441 2.4:+48925651 MS.gene070665:CDS
AACTGCTTTCCAGGAAGCAG+GGG 0.589254 2.4:+48925967 MS.gene070665:CDS
ATCGGTCCTCATGAATGATA+CGG 0.591847 2.4:-48925768 None:intergenic
AGGACAAAAGCTTCAAGAGA+TGG 0.592318 2.4:+48925451 MS.gene070665:CDS
TTCCGATGGAGGTGAAATAC+GGG 0.595001 2.4:+48925028 MS.gene070665:CDS
CATAGCGTGATGTGACGAAA+CGG 0.595242 2.4:-48922276 None:intergenic
GAAGAAGACGGTAACGCTGT+TGG 0.595499 2.4:-48922244 None:intergenic
GGTAAGGTTAATGAATTCAG+TGG 0.596983 2.4:+48925512 MS.gene070665:CDS
ACAAAAGCTTCAAGAGATGG+TGG 0.598927 2.4:+48925454 MS.gene070665:CDS
TGAATTATTCTGCAGAGAGT+AGG 0.600929 2.4:+48926176 MS.gene070665:CDS
CTCCACGAGCATTGTTATAG+CGG 0.600995 2.4:-48924974 None:intergenic
TAGGTGGGCCATCAAGGCAA+GGG 0.604948 2.4:+48924929 MS.gene070665:CDS
TCACAACCCCAATAACATCA+AGG 0.606648 2.4:-48925298 None:intergenic
CTTTAAATCCCTATCAGGGT+AGG 0.611287 2.4:+48924910 MS.gene070665:CDS
TAATACTTGCGATTCTGAAG+CGG 0.611376 2.4:-48922383 None:intergenic
GTCGATCTCCAATCATCAGA+GGG 0.611616 2.4:-48925811 None:intergenic
AGCTGTGTAACAAAATGGAT+CGG 0.612353 2.4:-48925786 None:intergenic
GGATCATTCAGGATTAACTT+GGG 0.613069 2.4:+48925943 MS.gene070665:CDS
TTCTTAAGGTCTGAGCCTCA+GGG 0.623006 2.4:-48925586 None:intergenic
GTTTAGGCTGAAAATCAAAG+AGG 0.625551 2.4:+48926099 MS.gene070665:CDS
GGTGAATTCTGCAACAGGGA+AGG 0.626099 2.4:+48925431 MS.gene070665:CDS
TTCTAAGGACATCACTCATG+GGG 0.629562 2.4:+48925652 MS.gene070665:CDS
GCCAGACTGGATAACAATGA+GGG 0.637901 2.4:+48925742 MS.gene070665:CDS
GGTCGATCTCCAATCATCAG+AGG 0.638969 2.4:-48925812 None:intergenic
AAATCCCTATCAGGGTAGGT+GGG 0.640512 2.4:+48924914 MS.gene070665:CDS
CAACCTCCTCCGCTTTACAA+AGG 0.641625 2.4:+48924834 MS.gene070665:CDS
AGCCAGACTGGATAACAATG+AGG 0.656016 2.4:+48925741 MS.gene070665:CDS
CAGCCTTTACTGCTAAAATG+GGG 0.656745 2.4:-48925490 None:intergenic
TAACTCGTCCAGTATTGACT+CGG 0.656818 2.4:-48922319 None:intergenic
GCACCACGACCTTTGTAAAG+CGG 0.657064 2.4:-48924843 None:intergenic
GTAATCGAGAAGCTGAACGA+TGG 0.661747 2.4:-48922351 None:intergenic
CCACGACCTTTGTAAAGCGG+AGG 0.662907 2.4:-48924840 None:intergenic
GCAGTGTGATAGATGCAACC+AGG 0.664374 2.4:+48925874 MS.gene070665:CDS
GTGATGTGACGAAACGGCGT+CGG 0.668120 2.4:-48922270 None:intergenic
GACTCGGTCATTGAGTTGAG+CGG 0.672963 2.4:-48922303 None:intergenic
AATACTGGACGAGTTAAGCA+AGG 0.673990 2.4:+48922326 MS.gene070665:CDS
TGTGTTGAAGTATGAACAGG+AGG 0.677244 2.4:+48926024 MS.gene070665:CDS
GGGCAACCGTATCATTCATG+AGG 0.684770 2.4:+48925762 MS.gene070665:CDS
AGTGTTGAGCTAACACTTTG+GGG 0.692814 2.4:+48925410 MS.gene070665:CDS
CATAAATCCAGATTTCCCTG+AGG 0.709312 2.4:+48925571 MS.gene070665:CDS
TTGGGGTGAATTCTGCAACA+GGG 0.712179 2.4:+48925427 MS.gene070665:CDS
CGGCGTCGGAGAGAAGAAGA+CGG 0.718695 2.4:-48922256 None:intergenic
AAGCAGGGGAGGAGATTATG+GGG 0.738154 2.4:+48925981 MS.gene070665:CDS
TCTAAGGACATCACTCATGG+GGG 0.753824 2.4:+48925653 MS.gene070665:CDS
AGCATTGCCTGATAACACTG+TGG 0.782811 2.4:+48924629 MS.gene070665:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTATTATTAATATTTC+TGG - chr2.4:48924664-48924683 None:intergenic 10.0%
!! CAGAAATATTAATAATAATT+TGG + chr2.4:48924662-48924681 MS.gene070665:CDS 10.0%
!! TTAAGTGATTAATTGATTAT+CGG + chr2.4:48922447-48922466 MS.gene070665:intron 15.0%
!! AAATTAAAGATGAAGATCTA+GGG + chr2.4:48925708-48925727 MS.gene070665:CDS 20.0%
!! ATGTATCATCTATAATGTTT+AGG - chr2.4:48924393-48924412 None:intergenic 20.0%
!! TAAGAATTAGTGTATGAATT+AGG + chr2.4:48922562-48922581 MS.gene070665:intron 20.0%
!! TAATTGTTAGTGTAAGAATT+AGG + chr2.4:48923609-48923628 MS.gene070665:intron 20.0%
!! TACATAAGTGTTATATTCTT+TGG + chr2.4:48924220-48924239 MS.gene070665:intron 20.0%
!! TGTATCATCTATAATGTTTA+GGG - chr2.4:48924392-48924411 None:intergenic 20.0%
!!! AACATTTTAGGTTGAAAATT+TGG - chr2.4:48923755-48923774 None:intergenic 20.0%
!!! AAGTTGTATTTCTAAGAATT+AGG + chr2.4:48922877-48922896 MS.gene070665:intron 20.0%
!!! AATGTTTTAGGTTGAAATTT+TGG - chr2.4:48924177-48924196 None:intergenic 20.0%
!!! ATTTTCAACCTAAAATGTTA+TGG + chr2.4:48923756-48923775 MS.gene070665:intron 20.0%
!!! TATTTCTAAGAATTAGGATA+TGG + chr2.4:48922883-48922902 MS.gene070665:intron 20.0%
!!! TGTATCATCAATAACATTTT+AGG - chr2.4:48923767-48923786 None:intergenic 20.0%
!!! TGTGATTTTCACTTTTTATT+AGG + chr2.4:48922661-48922680 MS.gene070665:intron 20.0%
!!! TTATGTACATTTCACTTTTT+AGG + chr2.4:48922984-48923003 MS.gene070665:intron 20.0%
! AAAGTTTACTTGATATCGAA+AGG + chr2.4:48925104-48925123 MS.gene070665:CDS 25.0%
! AAGTTGCATTTGTAAGAATT+AGG + chr2.4:48922714-48922733 MS.gene070665:intron 25.0%
! AATATCACATTTCATCAATG+AGG - chr2.4:48922748-48922767 None:intergenic 25.0%
! CAAATTAAAGATGAAGATCT+AGG + chr2.4:48925707-48925726 MS.gene070665:CDS 25.0%
! CAATCATTTGAAGAATGAAT+GGG + chr2.4:48925154-48925173 MS.gene070665:CDS 25.0%
! CATTTGTAAGAATTAGGTTA+TGG + chr2.4:48922720-48922739 MS.gene070665:intron 25.0%
! TATGCTGGATTTAAATTCAA+CGG + chr2.4:48925181-48925200 MS.gene070665:CDS 25.0%
! TCAATCATTTGAAGAATGAA+TGG + chr2.4:48925153-48925172 MS.gene070665:CDS 25.0%
! TTAGTGATAGTATTAGGATA+TGG + chr2.4:48923837-48923856 MS.gene070665:intron 25.0%
!! ATAATGTTTAGGGTGAAAAT+TGG - chr2.4:48924382-48924401 None:intergenic 25.0%
!! CAAATTTTGAACTAAAGCAA+TGG - chr2.4:48923555-48923574 None:intergenic 25.0%
!! GTGATAGTTAAATTACGTTT+TGG + chr2.4:48923877-48923896 MS.gene070665:intron 25.0%
!!! TTATGTGCATTTCACTTTTT+AGG + chr2.4:48922824-48922843 MS.gene070665:intron 25.0%
AACATTGTAGATGATGCATT+TGG + chr2.4:48924191-48924210 MS.gene070665:intron 30.0%
AATGCTATCCTTGATGTTAT+TGG + chr2.4:48925290-48925309 MS.gene070665:CDS 30.0%
AATGTTATGGATGATGCATT+TGG + chr2.4:48923985-48924004 MS.gene070665:intron 30.0%
ACATAAAACGTTCAGATAGA+TGG + chr2.4:48923022-48923041 MS.gene070665:intron 30.0%
ACTATAACACTTTATTGTGG+CGG - chr2.4:48923383-48923402 None:intergenic 30.0%
AGATGATACATTAGAGCTTA+TGG + chr2.4:48924402-48924421 MS.gene070665:intron 30.0%
ATACCTGATTGTGAAATCAT+TGG + chr2.4:48924564-48924583 MS.gene070665:CDS 30.0%
ATGCTATCCTTGATGTTATT+GGG + chr2.4:48925291-48925310 MS.gene070665:CDS 30.0%
GAGTGATTAGTGATAGTATT+AGG + chr2.4:48923831-48923850 MS.gene070665:intron 30.0%
GATTATTATGGTGCTTAACA+TGG + chr2.4:48924533-48924552 MS.gene070665:CDS 30.0%
GATTTCACAATCAGGTATTA+TGG - chr2.4:48924562-48924581 None:intergenic 30.0%
GTTATCACATTTCATCAACA+AGG - chr2.4:48922911-48922930 None:intergenic 30.0%
TACACTAACAATTAACCCAA+GGG - chr2.4:48923603-48923622 None:intergenic 30.0%
TACCTGATTGTGAAATCATT+GGG + chr2.4:48924565-48924584 MS.gene070665:CDS 30.0%
TAGTCAAATAGCAACTATAG+CGG - chr2.4:48923407-48923426 None:intergenic 30.0%
TCCGCTTTACAACAAAAATT+TGG + chr2.4:48924752-48924771 MS.gene070665:CDS 30.0%
TCTTCAATGAGTTTGTGTTT+AGG + chr2.4:48926083-48926102 MS.gene070665:CDS 30.0%
TGATTAATGTTATGGAACCT+CGG + chr2.4:48924050-48924069 MS.gene070665:intron 30.0%
TTACACTAACAATTAACCCA+AGG - chr2.4:48923604-48923623 None:intergenic 30.0%
TTCCTTGTACAGGATTATTA+TGG + chr2.4:48924521-48924540 MS.gene070665:intron 30.0%
TTGAATCTAAAGGACAATTC+TGG + chr2.4:48925383-48925402 MS.gene070665:CDS 30.0%
! AATGCATCATAACTGACTTT+AGG + chr2.4:48924457-48924476 MS.gene070665:intron 30.0%
! TGCATCATCCATAACATTTT+AGG - chr2.4:48923983-48924002 None:intergenic 30.0%
! TGCATCATCTACAATGTTTT+AGG - chr2.4:48924189-48924208 None:intergenic 30.0%
! TTTAGTTTCTTGTATCCCTT+GGG + chr2.4:48923585-48923604 MS.gene070665:intron 30.0%
!! AAATTTTTGTTGTAAAGCGG+AGG - chr2.4:48924753-48924772 None:intergenic 30.0%
!! ATACAACTTCTAGAACGATT+AGG - chr2.4:48922866-48922885 None:intergenic 30.0%
!! ATTTTATTTCCAAGTTCCGT+AGG + chr2.4:48926209-48926228 MS.gene070665:CDS 30.0%
!! GCCAAATTTTTGTTGTAAAG+CGG - chr2.4:48924756-48924775 None:intergenic 30.0%
!!! TTTTAGTTTCTTGTATCCCT+TGG + chr2.4:48923584-48923603 MS.gene070665:intron 30.0%
AAGTTAATCCTGAATGATCC+TGG - chr2.4:48925943-48925962 None:intergenic 35.0%
AATAAGAAAGTGACGAAGTC+AGG + chr2.4:48925839-48925858 MS.gene070665:CDS 35.0%
AGCTGTGTAACAAAATGGAT+CGG - chr2.4:48925789-48925808 None:intergenic 35.0%
AGGATCATTCAGGATTAACT+TGG + chr2.4:48925942-48925961 MS.gene070665:CDS 35.0%
ATGAGTGATGTCCTTAGAAA+TGG - chr2.4:48925651-48925670 None:intergenic 35.0%
ATGTCGAGAACTTGAAGTAA+CGG - chr2.4:48922194-48922213 None:intergenic 35.0%
ATTATCATAGTTCACTACCG+AGG - chr2.4:48924070-48924089 None:intergenic 35.0%
ATTCCATTCTTCCTTACGAT+GGG - chr2.4:48925344-48925363 None:intergenic 35.0%
CACCATAATAATCCTGTACA+AGG - chr2.4:48924526-48924545 None:intergenic 35.0%
CCTCAATTGCTTCATAGAAA+CGG - chr2.4:48925079-48925098 None:intergenic 35.0%
CTCAAAATGCTGGTAGTAAT+GGG + chr2.4:48924688-48924707 MS.gene070665:CDS 35.0%
GAATGAATGGGAAATTATGC+TGG + chr2.4:48925166-48925185 MS.gene070665:CDS 35.0%
GAATTCAGTGGAAAGTCTAT+AGG + chr2.4:48925524-48925543 MS.gene070665:CDS 35.0%
GGATCATTCAGGATTAACTT+GGG + chr2.4:48925943-48925962 MS.gene070665:CDS 35.0%
GGCACTATAACACTTTATTG+TGG - chr2.4:48923386-48923405 None:intergenic 35.0%
GGTAAGGTTAATGAATTCAG+TGG + chr2.4:48925512-48925531 MS.gene070665:CDS 35.0%
GGTGAAGATTACAGTAGTTA+AGG + chr2.4:48926144-48926163 MS.gene070665:CDS 35.0%
GTAACTTCAGTGAAGAATTG+TGG + chr2.4:48924268-48924287 MS.gene070665:intron 35.0%
GTATGTGTTGAAGTATGAAC+AGG + chr2.4:48926021-48926040 MS.gene070665:CDS 35.0%
GTCAAATAGCTGTCAAAACA+TGG - chr2.4:48923150-48923169 None:intergenic 35.0%
GTTTAGGCTGAAAATCAAAG+AGG + chr2.4:48926099-48926118 MS.gene070665:CDS 35.0%
TACAGTAGTTAAGGCAGATA+AGG + chr2.4:48926153-48926172 MS.gene070665:CDS 35.0%
TCTGAATCCACAAATGACTT+TGG - chr2.4:48924594-48924613 None:intergenic 35.0%
TGAATTATTCTGCAGAGAGT+AGG + chr2.4:48926176-48926195 MS.gene070665:CDS 35.0%
TGATTGAAATTCTTCTGTGC+AGG - chr2.4:48925140-48925159 None:intergenic 35.0%
TGCTATCCTTGATGTTATTG+GGG + chr2.4:48925292-48925311 MS.gene070665:CDS 35.0%
TGCTTCTCTATCCATTTCTA+AGG + chr2.4:48925637-48925656 MS.gene070665:CDS 35.0%
TGGGCGAATGATTAATGTTA+TGG + chr2.4:48924042-48924061 MS.gene070665:intron 35.0%
TGGTGCAGTTATGAAAAATG+AGG + chr2.4:48924860-48924879 MS.gene070665:CDS 35.0%
TGTTAGATCGTGGAAAATAG+TGG + chr2.4:48923060-48923079 MS.gene070665:intron 35.0%
TTCCCAATGATTTCACAATC+AGG - chr2.4:48924570-48924589 None:intergenic 35.0%
TTCTATGAAGCAATTGAGGT+TGG + chr2.4:48925080-48925099 MS.gene070665:CDS 35.0%
TTGATCAAACCAGGTTCTTA+AGG - chr2.4:48925603-48925622 None:intergenic 35.0%
! ACATAAGTGTTAGCTTCTTG+TGG + chr2.4:48924015-48924034 MS.gene070665:intron 35.0%
! AGTTTTGCGTATCTCATTCT+TGG - chr2.4:48925681-48925700 None:intergenic 35.0%
! ATTTCTAAGGACATCACTCA+TGG + chr2.4:48925650-48925669 MS.gene070665:CDS 35.0%
! GTTTTGCGTATCTCATTCTT+GGG - chr2.4:48925680-48925699 None:intergenic 35.0%
! TAATACTTGCGATTCTGAAG+CGG - chr2.4:48922386-48922405 None:intergenic 35.0%
! TAGGGATTTAAAGCAGCTAT+AGG - chr2.4:48924903-48924922 None:intergenic 35.0%
! TTCGTCACTTTCTTATTGCA+CGG - chr2.4:48925836-48925855 None:intergenic 35.0%
! TTTCTAAGGACATCACTCAT+GGG + chr2.4:48925651-48925670 MS.gene070665:CDS 35.0%
!! CAGAAGTGCTTTAGTTCAAA+TGG + chr2.4:48923230-48923249 MS.gene070665:intron 35.0%
!! GTGTTTGTTTTTCCTTGTAC+AGG + chr2.4:48924511-48924530 MS.gene070665:intron 35.0%
!! GTTCAAATGGATTACATCAG+CGG + chr2.4:48923243-48923262 MS.gene070665:intron 35.0%
!! TTTCCCCATTTTAGCAGTAA+AGG + chr2.4:48925487-48925506 MS.gene070665:CDS 35.0%
!!! GAGAAGGGTTTTGAATCTAA+AGG + chr2.4:48925373-48925392 MS.gene070665:CDS 35.0%
!!! TTGTGTGCGTTTTGCTTTTT+AGG + chr2.4:48922497-48922516 MS.gene070665:intron 35.0%
AATACTGGACGAGTTAAGCA+AGG + chr2.4:48922326-48922345 MS.gene070665:CDS 40.0%
AATCACATTCCTCAAACTCC+TGG - chr2.4:48925895-48925914 None:intergenic 40.0%
AATGATCCTGGATTTGAGCT+TGG - chr2.4:48925931-48925950 None:intergenic 40.0%
AATGTCACTGATAGGTCTGA+AGG - chr2.4:48925255-48925274 None:intergenic 40.0%
AATTTGGCTGCTCAAAATGC+TGG + chr2.4:48924678-48924697 MS.gene070665:CDS 40.0%
ACAAAAGCTTCAAGAGATGG+TGG + chr2.4:48925454-48925473 MS.gene070665:CDS 40.0%
ACAGTCTCAATGTCACTGAT+AGG - chr2.4:48925263-48925282 None:intergenic 40.0%
ACCAGCCTTTACTGCTAAAA+TGG - chr2.4:48925495-48925514 None:intergenic 40.0%
AGGACAAAAGCTTCAAGAGA+TGG + chr2.4:48925451-48925470 MS.gene070665:CDS 40.0%
ATCGGTCCTCATGAATGATA+CGG - chr2.4:48925771-48925790 None:intergenic 40.0%
ATGGAATGGAAACACTGAGA+AGG + chr2.4:48925357-48925376 MS.gene070665:CDS 40.0%
ATTCCGATGGAGGTGAAATA+CGG + chr2.4:48925027-48925046 MS.gene070665:CDS 40.0%
CAGCCTTTACTGCTAAAATG+GGG - chr2.4:48925493-48925512 None:intergenic 40.0%
CATAAATCCAGATTTCCCTG+AGG + chr2.4:48925571-48925590 MS.gene070665:CDS 40.0%
CATCGTAAGGAAGAATGGAA+TGG + chr2.4:48925343-48925362 MS.gene070665:CDS 40.0%
CATTCCATTCTTCCTTACGA+TGG - chr2.4:48925345-48925364 None:intergenic 40.0%
CCAGCCTTTACTGCTAAAAT+GGG - chr2.4:48925494-48925513 None:intergenic 40.0%
CCGTTTCTATGAAGCAATTG+AGG + chr2.4:48925076-48925095 MS.gene070665:CDS 40.0%
CTCCAAATGCTGGTAGTAAT+GGG + chr2.4:48924778-48924797 MS.gene070665:CDS 40.0%
CTGAAGGAGAATTGTTGTCT+AGG - chr2.4:48925239-48925258 None:intergenic 40.0%
CTTTAAATCCCTATCAGGGT+AGG + chr2.4:48924910-48924929 MS.gene070665:CDS 40.0%
GAGAACTTGAAGTAACGGTT+TGG - chr2.4:48922189-48922208 None:intergenic 40.0%
GCTCAAAATGCTGGTAGTAA+TGG + chr2.4:48924687-48924706 MS.gene070665:CDS 40.0%
GTATAGAACCATCCTCATCT+GGG - chr2.4:48925217-48925236 None:intergenic 40.0%
TATAACAATGCTCGTGGAGA+TGG + chr2.4:48924978-48924997 MS.gene070665:CDS 40.0%
TCACAACCCCAATAACATCA+AGG - chr2.4:48925301-48925320 None:intergenic 40.0%
TGGAATGGAAACACTGAGAA+GGG + chr2.4:48925358-48925377 MS.gene070665:CDS 40.0%
TGGGAATCCAAAGTCATTTG+TGG + chr2.4:48924584-48924603 MS.gene070665:CDS 40.0%
TGTGTTGAAGTATGAACAGG+AGG + chr2.4:48926024-48926043 MS.gene070665:CDS 40.0%
TTTAGCAGTAAAGGCTGGTA+AGG + chr2.4:48925496-48925515 MS.gene070665:CDS 40.0%
TTTCCCAACTTGATCAAACC+AGG - chr2.4:48925612-48925631 None:intergenic 40.0%
TTTGATCTCCTTGATTCCGA+TGG + chr2.4:48925014-48925033 MS.gene070665:CDS 40.0%
! AGAACCTGGTTTGATCAAGT+TGG + chr2.4:48925605-48925624 MS.gene070665:CDS 40.0%
! AGCTGCTTTAAATCCCTATC+AGG + chr2.4:48924905-48924924 MS.gene070665:CDS 40.0%
! AGTGTTGAGCTAACACTTTG+GGG + chr2.4:48925410-48925429 MS.gene070665:CDS 40.0%
! GAACCTGGTTTGATCAAGTT+GGG + chr2.4:48925606-48925625 MS.gene070665:CDS 40.0%
! GAATCAGTGTTGTTAGATCG+TGG + chr2.4:48923050-48923069 MS.gene070665:intron 40.0%
! GCTGCTTTAAATCCCTATCA+GGG + chr2.4:48924906-48924925 MS.gene070665:CDS 40.0%
! GTTAGCTTCTTCTATCTCCT+GGG + chr2.4:48923807-48923826 MS.gene070665:intron 40.0%
! TGGTATTGAGGTTGAACTGT+TGG - chr2.4:48924726-48924745 None:intergenic 40.0%
! TGTTAGCTTCTTCTATCTCC+TGG + chr2.4:48923806-48923825 MS.gene070665:intron 40.0%
! TTCTAAGGACATCACTCATG+GGG + chr2.4:48925652-48925671 MS.gene070665:CDS 40.0%
!! AGAGTGTTGAGCTAACACTT+TGG + chr2.4:48925408-48925427 MS.gene070665:CDS 40.0%
!! GAGTGTTGAGCTAACACTTT+GGG + chr2.4:48925409-48925428 MS.gene070665:CDS 40.0%
!! GTAGTAATGGGCAGAATTTC+AGG + chr2.4:48924700-48924719 MS.gene070665:CDS 40.0%
!! TAACTCGTCCAGTATTGACT+CGG - chr2.4:48922322-48922341 None:intergenic 40.0%
!! TTTTTGTTGTAAAGCGGAGG+AGG - chr2.4:48924750-48924769 None:intergenic 40.0%
AAATCCCTATCAGGGTAGGT+GGG + chr2.4:48924914-48924933 MS.gene070665:CDS 45.0%
AACTTGGGTAACTGCTTTCC+AGG + chr2.4:48925958-48925977 MS.gene070665:CDS 45.0%
AAGGCAAGGGTTACTGCAAA+AGG + chr2.4:48924942-48924961 MS.gene070665:CDS 45.0%
AATTTGGCTGCTCCAAATGC+TGG + chr2.4:48924768-48924787 MS.gene070665:CDS 45.0%
AGCATTGCCTGATAACACTG+TGG + chr2.4:48924629-48924648 MS.gene070665:CDS 45.0%
AGCCAGACTGGATAACAATG+AGG + chr2.4:48925741-48925760 MS.gene070665:CDS 45.0%
ATCCTTCAGTTCCCATCGTA+AGG + chr2.4:48925330-48925349 MS.gene070665:CDS 45.0%
CAGGAGGATGATGAGAAGTT+TGG + chr2.4:48926040-48926059 MS.gene070665:CDS 45.0%
CATAGCGTGATGTGACGAAA+CGG - chr2.4:48922279-48922298 None:intergenic 45.0%
CGAAGTCAGGAGACACAAAA+TGG + chr2.4:48925852-48925871 MS.gene070665:CDS 45.0%
CTATCACTAATCACTCTCCC+AGG - chr2.4:48923827-48923846 None:intergenic 45.0%
CTCAATGACCGAGTCAATAC+TGG + chr2.4:48922311-48922330 MS.gene070665:CDS 45.0%
GCCAGACTGGATAACAATGA+GGG + chr2.4:48925742-48925761 MS.gene070665:CDS 45.0%
GCTATAGGTATTACACGTGC+TGG - chr2.4:48924888-48924907 None:intergenic 45.0%
GCTCAAATCCAGGATCATTC+AGG + chr2.4:48925932-48925951 MS.gene070665:CDS 45.0%
GCTCCAAATGCTGGTAGTAA+TGG + chr2.4:48924777-48924796 MS.gene070665:CDS 45.0%
GGATTACATCAGCGGTACTA+TGG + chr2.4:48923251-48923270 MS.gene070665:intron 45.0%
GGGCAAGCTGTGTAACAAAA+TGG - chr2.4:48925794-48925813 None:intergenic 45.0%
GGTATAGAACCATCCTCATC+TGG - chr2.4:48925218-48925237 None:intergenic 45.0%
GTAATCGAGAAGCTGAACGA+TGG - chr2.4:48922354-48922373 None:intergenic 45.0%
GTCGATCTCCAATCATCAGA+GGG - chr2.4:48925814-48925833 None:intergenic 45.0%
GTTCCCATCGTAAGGAAGAA+TGG + chr2.4:48925338-48925357 MS.gene070665:CDS 45.0%
TAAATCCCTATCAGGGTAGG+TGG + chr2.4:48924913-48924932 MS.gene070665:CDS 45.0%
TAACTGCTTTCCAGGAAGCA+GGG + chr2.4:48925966-48925985 MS.gene070665:CDS 45.0%
TACCCGTATTTCACCTCCAT+CGG - chr2.4:48925033-48925052 None:intergenic 45.0%
TAGATGCAACCAGGAGTTTG+AGG + chr2.4:48925883-48925902 MS.gene070665:CDS 45.0%
TCAGGCAATGCTTTCTGAAC+TGG - chr2.4:48924621-48924640 None:intergenic 45.0%
TCTAAGGACATCACTCATGG+GGG + chr2.4:48925653-48925672 MS.gene070665:CDS 45.0%
TGCCCATTACTACCAGCATT+TGG - chr2.4:48924693-48924712 None:intergenic 45.0%
TGGTATGGAGGTTGAACTGT+TGG - chr2.4:48924816-48924835 None:intergenic 45.0%
TTCCGATGGAGGTGAAATAC+GGG + chr2.4:48925028-48925047 MS.gene070665:CDS 45.0%
TTCCTTACGATGGGAACTGA+AGG - chr2.4:48925335-48925354 None:intergenic 45.0%
TTCTTAAGGTCTGAGCCTCA+GGG - chr2.4:48925589-48925608 None:intergenic 45.0%
TTGGGGTGAATTCTGCAACA+GGG + chr2.4:48925427-48925446 MS.gene070665:CDS 45.0%
TTTCACCTCCATCGGAATCA+AGG - chr2.4:48925025-48925044 None:intergenic 45.0%
! CTCCACGAGCATTGTTATAG+CGG - chr2.4:48924977-48924996 None:intergenic 45.0%
! GTTAGCTTCTTGTGGCTCTT+GGG + chr2.4:48924023-48924042 MS.gene070665:intron 45.0%
! TGTTAGCTTCTTGTGGCTCT+TGG + chr2.4:48924022-48924041 MS.gene070665:intron 45.0%
! TTTGGGGTGAATTCTGCAAC+AGG + chr2.4:48925426-48925445 MS.gene070665:CDS 45.0%
!! ACGCTGTTGGTGAGAGTTTT+TGG - chr2.4:48922234-48922253 None:intergenic 45.0%
!! CCCATTTTAGCAGTAAAGGC+TGG + chr2.4:48925491-48925510 MS.gene070665:CDS 45.0%
!! TTCAAGAGATGGTGGATGCT+GGG + chr2.4:48925462-48925481 MS.gene070665:CDS 45.0%
AACTGCTTTCCAGGAAGCAG+GGG + chr2.4:48925967-48925986 MS.gene070665:CDS 50.0%
AAGCAGGGGAGGAGATTATG+GGG + chr2.4:48925981-48926000 MS.gene070665:CDS 50.0%
ACAGCTTGCCCTCTGATGAT+TGG + chr2.4:48925803-48925822 MS.gene070665:CDS 50.0%
AGGCTCAGACCTTAAGAACC+TGG + chr2.4:48925591-48925610 MS.gene070665:CDS 50.0%
CAACCTCCTCCGCTTTACAA+AGG + chr2.4:48924744-48924763 MS.gene070665:CDS 50.0%
CCTGGATTTGAGCTTGGAGA+AGG - chr2.4:48925925-48925944 None:intergenic 50.0%
CCTTCTCCAAGCTCAAATCC+AGG + chr2.4:48925922-48925941 MS.gene070665:CDS 50.0%
CTTTGTAAAGCGGAGGAGGT+TGG - chr2.4:48924836-48924855 None:intergenic 50.0%
GAACCAGCCACAGTGTTATC+AGG - chr2.4:48924639-48924658 None:intergenic 50.0%
GAAGAAGACGGTAACGCTGT+TGG - chr2.4:48922247-48922266 None:intergenic 50.0%
GAAGCAGGGGAGGAGATTAT+GGG + chr2.4:48925980-48925999 MS.gene070665:CDS 50.0%
GATCTCCTTGATTCCGATGG+AGG + chr2.4:48925017-48925036 MS.gene070665:CDS 50.0%
GCACCACGACCTTTGTAAAG+CGG - chr2.4:48924846-48924865 None:intergenic 50.0%
GCAGTGTGATAGATGCAACC+AGG + chr2.4:48925874-48925893 MS.gene070665:CDS 50.0%
GCCCTCATTGTTATCCAGTC+TGG - chr2.4:48925746-48925765 None:intergenic 50.0%
GGGCAACCGTATCATTCATG+AGG + chr2.4:48925762-48925781 MS.gene070665:CDS 50.0%
GGTCGATCTCCAATCATCAG+AGG - chr2.4:48925815-48925834 None:intergenic 50.0%
GGTGAATTCTGCAACAGGGA+AGG + chr2.4:48925431-48925450 MS.gene070665:CDS 50.0%
GTAACTGCTTTCCAGGAAGC+AGG + chr2.4:48925965-48925984 MS.gene070665:CDS 50.0%
GTTCTTAAGGTCTGAGCCTC+AGG - chr2.4:48925590-48925609 None:intergenic 50.0%
TATCGCCGGAATAGCGTTTG+CGG - chr2.4:48922147-48922166 None:intergenic 50.0%
TCTCACCGCAAACGCTATTC+CGG + chr2.4:48922139-48922158 MS.gene070665:CDS 50.0%
TGCAGTAACCCTTGCCTTGA+TGG - chr2.4:48924940-48924959 None:intergenic 50.0%
TGTTGTAAAGCGGAGGAGGT+TGG - chr2.4:48924746-48924765 None:intergenic 50.0%
TTGCCTGATAACACTGTGGC+TGG + chr2.4:48924633-48924652 MS.gene070665:CDS 50.0%
! GATGAAGATCTAGGGCGTTC+AGG + chr2.4:48925716-48925735 MS.gene070665:CDS 50.0%
!! CTTCAAGAGATGGTGGATGC+TGG + chr2.4:48925461-48925480 MS.gene070665:CDS 50.0%
!! GACTCGGTCATTGAGTTGAG+CGG - chr2.4:48922306-48922325 None:intergenic 50.0%
!! TAAAGCGGAGGAGGTTGGTA+TGG - chr2.4:48924741-48924760 None:intergenic 50.0%
!! TCAAGAGATGGTGGATGCTG+GGG + chr2.4:48925463-48925482 MS.gene070665:CDS 50.0%
ATGGCCCACCTACCCTGATA+GGG - chr2.4:48924921-48924940 None:intergenic 55.0%
CCACGACCTTTGTAAAGCGG+AGG - chr2.4:48924843-48924862 None:intergenic 55.0%
CCTCCGCTTTACAAAGGTCG+TGG + chr2.4:48924840-48924859 MS.gene070665:CDS 55.0%
CGACCTTTGTAAAGCGGAGG+AGG - chr2.4:48924840-48924859 None:intergenic 55.0%
CGCCGCTATAACAATGCTCG+TGG + chr2.4:48924972-48924991 MS.gene070665:CDS 55.0%
GAGCTTTGCCCAGATGAGGA+TGG + chr2.4:48925206-48925225 MS.gene070665:CDS 55.0%
GCTATTCCGGCGATAATCGC+CGG + chr2.4:48922152-48922171 MS.gene070665:CDS 55.0%
GGAAGCAGGGGAGGAGATTA+TGG + chr2.4:48925979-48925998 MS.gene070665:CDS 55.0%
GGTTGAGCTTTGCCCAGATG+AGG + chr2.4:48925202-48925221 MS.gene070665:CDS 55.0%
GTCTGAGCCTCAGGGAAATC+TGG - chr2.4:48925581-48925600 None:intergenic 55.0%
GTGATGTGACGAAACGGCGT+CGG - chr2.4:48922273-48922292 None:intergenic 55.0%
TAATCTCCTCCCCTGCTTCC+TGG - chr2.4:48925979-48925998 None:intergenic 55.0%
TAGGTGGGCCATCAAGGCAA+GGG + chr2.4:48924929-48924948 MS.gene070665:CDS 55.0%
!! AGCGGAGGAGGTTGGTATTG+AGG - chr2.4:48924738-48924757 None:intergenic 55.0%
GATGGCCCACCTACCCTGAT+AGG - chr2.4:48924922-48924941 None:intergenic 60.0%
GTAGGTGGGCCATCAAGGCA+AGG + chr2.4:48924928-48924947 MS.gene070665:CDS 60.0%
TCAGGGTAGGTGGGCCATCA+AGG + chr2.4:48924923-48924942 MS.gene070665:CDS 60.0%
TGCTTTCCAGGAAGCAGGGG+AGG + chr2.4:48925970-48925989 MS.gene070665:CDS 60.0%
! CGGCGTCGGAGAGAAGAAGA+CGG - chr2.4:48922259-48922278 None:intergenic 60.0%
!! AGCGGAGGAGGTTGGTATGG+AGG - chr2.4:48924828-48924847 None:intergenic 60.0%
ACGTCGCCGGCGATTATCGC+CGG - chr2.4:48922161-48922180 None:intergenic 65.0%
GGCGTTCAGGCAAGCCAGAC+TGG + chr2.4:48925729-48925748 MS.gene070665:CDS 65.0%
!! CGGTTTGGCGTCGACGTCGC+CGG - chr2.4:48922174-48922193 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 48922128 48926237 48922128 ID=MS.gene070665
chr2.4 mRNA 48922128 48926237 48922128 ID=MS.gene070665.t1;Parent=MS.gene070665
chr2.4 exon 48922128 48922399 48922128 ID=MS.gene070665.t1.exon1;Parent=MS.gene070665.t1
chr2.4 CDS 48922128 48922399 48922128 ID=cds.MS.gene070665.t1;Parent=MS.gene070665.t1
chr2.4 exon 48924533 48926237 48924533 ID=MS.gene070665.t1.exon2;Parent=MS.gene070665.t1
chr2.4 CDS 48924533 48926237 48924533 ID=cds.MS.gene070665.t1;Parent=MS.gene070665.t1
Gene Sequence

>MS.gene070665

ATGGCGGTGAATCTCACCGCAAACGCTATTCCGGCGATAATCGCCGGCGACGTCGACGCCAAACCGTTACTTCAAGTTCTCGACATTGCAACAATCGTAAGCACCAAAAACTCTCACCAACAGCGTTACCGTCTTCTTCTCTCCGACGCCGTTTCGTCACATCACGCTATGCTCGCCGCTCAACTCAATGACCGAGTCAATACTGGACGAGTTAAGCAAGGTTCCATCGTTCAGCTTCTCGATTACATTTGCACTCCGCTTCAGAATCGCAAGTATTACTCTTCGCTTCGTTTTTTTTGTTGCTTAATTTGTTCTTCGATTAAGTGATTAATTGATTATCGGTGTATTTAGATTGTTTCGATTTGAATTTTGTGTGCGTTTTGCTTTTTAGGTTATTTTAAGATGAATCTAGAACGTTCTAGAAGTTGCGTTTGTAAGAATTAGTGTATGAATTAGGATATGATACTTCGTTGATGAAATGTGATAGTTGAACTAAGCTTTAGTTTCTTGTGATAGTTGAAATTTGAATTTCATGTGATTTTCACTTTTTATTAGGTCATTTCAAATTTGAACTTAAACGTTCTAGAAGTTGCATTTGTAAGAATTAGGTTATGGAACCTCATTGATGAAATGTGATATTTGAACTAAGTTCTAGTTTCTTGTGATAGTTGATTTGAGATTGTTGAAATTTGAATTTTATGTGCATTTCACTTTTTAGGTCATTTCGAGTTTGAACCTAATCGTTCTAGAAGTTGTATTTCTAAGAATTAGGATATGGAACCTTGTTGATGAAATGTGATAACTGACTTTTAGTTTCTTGTGATAGTTTAATTAAGATTTTGTTGCAATTTGAATTTTATGTACATTTCACTTTTTAGGTCATTCTAATTTTGAACATAAAACGTTCAGATAGATGGATTTAGAATCAGTGTTGTTAGATCGTGGAAAATAGTGGCTATTTGACAAGATTTTGAACTGAATAGTGTATCGTGAAACAATAGCGATTTGTTCTAATTGTGCCATGTTTTGACAGCTATTTGACAACACTGTTGTAATAGTTCTATTGTTTACTTGAGTTTTAGTTTCTTGTAATACATGTTGTCAGAAGTGCTTTAGTTCAAATGGATTACATCAGCGGTACTATGGATTACAAAAGTGTTATTAACAATGTTTTAGTTCAAATTTTCTTAAGACACGTTTGAAATTTGTGTTGTCAATCGCATATTGCATAAAATAGCAGTTTGTTCAAATTCCGCCACAATAAAGTGTTATAGTGCCGCTATAGTTGCTATTTGACTACACTTTGTACTAAATAGTGTATTGTGAAACAATAACAATTTGTTCAAAAATTGTGTGATGCTATAGTAGCTATTTGACAATTGTGTGATGCTATAGTAGCTATTTGACAATAACACTGTTGTAATCCATTGCTTTAGTTCAAAATTTGTTGCTTAAGTTTTAGTTTCTTGTATCCCTTGGGTTAATTGTTAGTGTAAGAATTAGGATATGATAACTCAGTGATGAATTGTCAATTGCGATAGTTGAATTAAGTTTTAGTTTCTTGTCATAGTTTAAGTAAGATTGTTGTGATTTGAATTTTATGTGAAATTCAGTTTTGTATCATTTGAATTTTCAACCTAAAATGTTATTGATGATACAATTGATTATTTTACACAAGTGTTAGCTTCTTCTATCTCCTGGGAGAGTGATTAGTGATAGTATTAGGATATGGAATCTCAGTGATGAATTGTGATAGTTAAATTACGTTTTGGTTTCTTGTGATAGTTTACTTAAGATTGCTGTGTTTGAGTTTTATGCGAAATTCAGTTTTTACATCATTCCAAATTTTCAACCTAAAATGTTATGGATGATGCATTTGGTTATTTTACATAAGTGTTAGCTTCTTGTGGCTCTTGGGCGAATGATTAATGTTATGGAACCTCGGTAGTGAACTATGATAATCTAACTAAGTTTTAGTCTCTTGTGATAGTCTTGTTAAGATTGTTGCGATTTGAATATTATGTGAATTTCAGTTTTTGCATCATTCCAAAATTTCAACCTAAAACATTGTAGATGATGCATTTGGTTACTTTACATAAGTGTTATATTCTTTGGTCACTTGACAAATGATGAGTGATATGTAACTTCAGTGAAGAATTGTGGTAGTTGAATTAAGTTTTAGTTTTTTGTGATAGTTTAATTAAGATTGTTGCGATTTGAATTTTATGTGAATTTCGTTGTTTGCATCATTCCAATTTTCACCCTAAACATTATAGATGATACATTAGAGCTTATGGATGTTTAAGAGTTGAAAGAATGTTACAGATGAAATGCATCATAACTGACTTTAGGTTTATTCTCTAAACTTGATTTGTGTGCTTCTGTGTTTGTTTTTCCTTGTACAGGATTATTATGGTGCTTAACATGGAAACCATAATACCTGATTGTGAAATCATTGGGAATCCAAAGTCATTTGTGGATTCAGAGTTACCAGTTCAGAAAGCATTGCCTGATAACACTGTGGCTGGTTCGTCCAGAAATATTAATAATAATTTGGCTGCTCAAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCAATACCAACCTCCTCCGCTTTACAACAAAAATTTGGCTGCTCCAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCCATACCAACCTCCTCCGCTTTACAAAGGTCGTGGTGCAGTTATGAAAAATGAGGCGCCAGCACGTGTAATACCTATAGCTGCTTTAAATCCCTATCAGGGTAGGTGGGCCATCAAGGCAAGGGTTACTGCAAAAGGAGATTTGCGCCGCTATAACAATGCTCGTGGAGATGGAAAAGTCTTCTCGTTTGATCTCCTTGATTCCGATGGAGGTGAAATACGGGTAACTTGCTTTAATGCTGTTGTTGACCGTTTCTATGAAGCAATTGAGGTTGGTAAAGTTTACTTGATATCGAAAGGTAGCTTGAAACCTGCACAGAAGAATTTCAATCATTTGAAGAATGAATGGGAAATTATGCTGGATTTAAATTCAACGGTTGAGCTTTGCCCAGATGAGGATGGTTCTATACCTAGACAACAATTCTCCTTCAGACCTATCAGTGACATTGAGACTGTTGAGAGTAATGCTATCCTTGATGTTATTGGGGTTGTGACATCTGTAAATCCTTCAGTTCCCATCGTAAGGAAGAATGGAATGGAAACACTGAGAAGGGTTTTGAATCTAAAGGACAATTCTGGCAAGAGTGTTGAGCTAACACTTTGGGGTGAATTCTGCAACAGGGAAGGACAAAAGCTTCAAGAGATGGTGGATGCTGGGGTTTTCCCCATTTTAGCAGTAAAGGCTGGTAAGGTTAATGAATTCAGTGGAAAGTCTATAGGCTCTATTTCTACTACACAGCTTTTCATAAATCCAGATTTCCCTGAGGCTCAGACCTTAAGAACCTGGTTTGATCAAGTTGGGAAAGATTCTGCTTCTCTATCCATTTCTAAGGACATCACTCATGGGGGACCCAAGAATGAGATACGCAAAACTGTGTCTCAAATTAAAGATGAAGATCTAGGGCGTTCAGGCAAGCCAGACTGGATAACAATGAGGGCAACCGTATCATTCATGAGGACCGATCCATTTTGTTACACAGCTTGCCCTCTGATGATTGGAGATCGACCGTGCAATAAGAAAGTGACGAAGTCAGGAGACACAAAATGGCAGTGTGATAGATGCAACCAGGAGTTTGAGGAATGTGATTATCGTTACCTTCTCCAAGCTCAAATCCAGGATCATTCAGGATTAACTTGGGTAACTGCTTTCCAGGAAGCAGGGGAGGAGATTATGGGGTACTCAGCAAAAGATCTGTATGTGTTGAAGTATGAACAGGAGGATGATGAGAAGTTTGGAGATATAATTAAGAGTAGACTCTTCAATGAGTTTGTGTTTAGGCTGAAAATCAAAGAGGAATTATATAATGACGAACAGAAGGTGAAGATTACAGTAGTTAAGGCAGATAAGGTGAATTATTCTGCAGAGAGTAGGTACATGCTTGATTTTATTTCCAAGTTCCGTAGGCAGTGA
Protein sequence

>MS.gene070665.t1

MAVNLTANAIPAIIAGDVDAKPLLQVLDIATIVSTKNSHQQRYRLLLSDAVSSHHAMLAAQLNDRVNTGRVKQGSIVQLLDYICTPLQNRKIIMVLNMETIIPDCEIIGNPKSFVDSELPVQKALPDNTVAGSSRNINNNLAAQNAGSNGQNFRPTVQPQYQPPPLYNKNLAAPNAGSNGQNFRPTVQPPYQPPPLYKGRGAVMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEAIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSIPRQQFSFRPISDIETVESNAILDVIGVVTSVNPSVPIVRKNGMETLRRVLNLKDNSGKSVELTLWGEFCNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQTLRTWFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIKDEDLGRSGKPDWITMRATVSFMRTDPFCYTACPLMIGDRPCNKKVTKSGDTKWQCDRCNQEFEECDYRYLLQAQIQDHSGLTWVTAFQEAGEEIMGYSAKDLYVLKYEQEDDEKFGDIIKSRLFNEFVFRLKIKEELYNDEQKVKITVVKADKVNYSAESRYMLDFISKFRRQ