AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051178

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051178.t1 MTR_2g041270 93.161 658 14 1 1 658 1 627 0.0 1258
MS.gene051178.t1 MTR_3g047950 72.473 465 113 3 203 655 121 582 0.0 702
MS.gene051178.t1 MTR_3g047950 61.157 121 47 0 1 121 1 121 1.20e-37 150
MS.gene051178.t1 MTR_4g109580 36.207 464 274 7 206 655 159 614 1.34e-93 302
MS.gene051178.t1 MTR_4g109580 38.500 400 224 7 206 591 159 550 9.86e-85 277
MS.gene051178.t1 MTR_4g109590 26.923 286 162 8 383 657 18 267 7.88e-23 99.0
MS.gene051178.t1 MTR_5g027390 24.932 369 230 15 237 587 23 362 1.34e-16 83.6
MS.gene051178.t1 MTR_4g070090 25.074 339 219 13 266 587 74 394 6.81e-16 81.3
MS.gene051178.t1 MTR_5g026880 34.400 125 71 2 1 125 1 114 9.27e-15 72.0
MS.gene051178.t1 MTR_6g052340 28.708 209 135 8 254 452 42 246 2.70e-14 76.6
MS.gene051178.t1 MTR_5g078250 24.797 246 166 7 254 486 46 285 1.18e-11 68.2
MS.gene051178.t1 MTR_8g479260 19.895 382 260 14 225 587 20 374 1.93e-11 67.4
MS.gene051178.t1 MTR_6g039240 22.330 309 193 11 215 504 8 288 5.05e-11 64.7
MS.gene051178.t1 MTR_2g008650 19.634 382 261 14 225 587 20 374 5.14e-11 66.2
MS.gene051178.t1 MTR_2g048560 20.888 383 275 14 215 587 8 372 5.90e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051178.t1 AT2G06510 67.328 655 198 4 1 654 1 640 0.0 909
MS.gene051178.t1 AT2G06510 66.930 632 193 4 24 654 1 617 0.0 878
MS.gene051178.t1 AT4G19130 49.854 684 302 11 1 656 1 671 0.0 682
MS.gene051178.t1 AT4G19130 49.707 682 306 8 1 656 2 672 0.0 682
MS.gene051178.t1 AT5G45400 61.684 475 177 4 184 656 270 741 0.0 643
MS.gene051178.t1 AT5G45400 33.121 157 98 2 1 150 1 157 1.19e-18 90.9
MS.gene051178.t1 AT5G08020 33.013 624 342 16 42 654 41 599 3.31e-103 327
MS.gene051178.t1 AT5G61000 31.315 677 386 17 1 653 1 622 8.11e-97 311
MS.gene051178.t1 AT1G52950 22.045 440 294 14 215 629 10 425 6.02e-16 82.0

Find 184 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTATTATTAATATTTC+TGG 0.129088 2.3:-48457529 None:intergenic
ACCAGCCTTTACTGCTAAAA+TGG 0.144775 2.3:-48458360 None:intergenic
CAGAAATATTAATAATAATT+TGG 0.171665 2.3:+48457530 MS.gene051178:CDS
TGCAGTAACCCTTGCCTTGA+TGG 0.192465 2.3:-48457805 None:intergenic
GGAAGCAGGGGAGGAGATTA+TGG 0.234809 2.3:+48458847 MS.gene051178:CDS
GATTTCACAATCAGGTATTA+TGG 0.235355 2.3:-48457427 None:intergenic
ATGCTATCCTTGATGTTATT+GGG 0.237693 2.3:+48458159 MS.gene051178:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2.3:+48457568 MS.gene051178:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2.3:+48457658 MS.gene051178:CDS
AATGCTATCCTTGATGTTAT+TGG 0.260217 2.3:+48458158 MS.gene051178:CDS
AGCTGCTTTAAATCCCTATC+AGG 0.291739 2.3:+48457773 MS.gene051178:CDS
TTCCTTGTACAGGATTATTA+TGG 0.291986 2.3:+48457389 MS.gene051178:intron
TGCTTCTCTATCCATTTCTA+AGG 0.293301 2.3:+48458505 MS.gene051178:CDS
TTGAATCTAAAGGACAATTC+TGG 0.293961 2.3:+48458251 MS.gene051178:CDS
AACTTGGGTAACTGCTTTCC+AGG 0.306558 2.3:+48458826 MS.gene051178:CDS
TAATCTCCTCCCCTGCTTCC+TGG 0.309445 2.3:-48458844 None:intergenic
GAGTGTTGAGCTAACACTTT+GGG 0.310178 2.3:+48458277 MS.gene051178:CDS
GTCTGAGCCTCAGGGAAATC+TGG 0.314113 2.3:-48458446 None:intergenic
GTTCTTAAGGTCTGAGCCTC+AGG 0.330109 2.3:-48458455 None:intergenic
TTGATCAAACCAGGTTCTTA+AGG 0.331128 2.3:-48458468 None:intergenic
TCTAACCGCAAACGCTATTC+CGG 0.332578 2.3:+48455067 MS.gene051178:CDS
GATGGCCCACCTACCCTGAT+AGG 0.333085 2.3:-48457787 None:intergenic
GCCCTCATTGTTATCCAGTC+TGG 0.338147 2.3:-48458611 None:intergenic
CAGGAGGATGATGAGAAGTT+TGG 0.346761 2.3:+48458908 MS.gene051178:CDS
CAATCACTGCCTACGGAACT+TGG 0.351957 2.3:-48459086 None:intergenic
TCAGGCAATGCTTTCTGAAC+TGG 0.362621 2.3:-48457486 None:intergenic
GGTATAGAACCATCCTCATC+TGG 0.367686 2.3:-48458083 None:intergenic
CTCAAAATGCTGGTAGTAAT+GGG 0.368189 2.3:+48457556 MS.gene051178:CDS
TCAATCATTTGAAGAATGAA+TGG 0.372621 2.3:+48458021 MS.gene051178:CDS
TGCCCATTACTACCAGCATT+TGG 0.378317 2.3:-48457648 None:intergenic
GCTCAAATCCAGGATCATTC+AGG 0.380015 2.3:+48458800 MS.gene051178:CDS
ACAGCTTGCCCTCTGATGAT+TGG 0.387057 2.3:+48458671 MS.gene051178:CDS
GAACCAGCCACAGTGTTATC+AGG 0.387320 2.3:-48457504 None:intergenic
TTTGGGGTGAATTCTGCAAC+AGG 0.396738 2.3:+48458294 MS.gene051178:CDS
GATGAAGGTCTAGGGCGTTC+AGG 0.398577 2.3:+48458584 MS.gene051178:CDS
CAAATTAAAGATGAAGGTCT+AGG 0.399809 2.3:+48458575 MS.gene051178:CDS
GGTGAAGATTACAGTAGTTA+AGG 0.400983 2.3:+48459012 MS.gene051178:CDS
ATGAGTGATGTCCTTAGAAA+TGG 0.402311 2.3:-48458516 None:intergenic
CTCCAAATGCTGGTAGTAAT+GGG 0.405201 2.3:+48457646 MS.gene051178:CDS
CCAGCCTTTACTGCTAAAAT+GGG 0.406397 2.3:-48458359 None:intergenic
GAACCTGGTTTGATCAAGTT+GGG 0.410401 2.3:+48458474 MS.gene051178:CDS
AGCGGAGGAGGTTGGTATTG+AGG 0.411724 2.3:-48457603 None:intergenic
TCTGAATCCACAAATGACTT+TGG 0.414308 2.3:-48457459 None:intergenic
ATACCTGATTGTGAAATCAT+TGG 0.415649 2.3:+48457432 MS.gene051178:CDS
CTTCAAGAGATGGTGGATGC+TGG 0.419540 2.3:+48458329 MS.gene051178:CDS
AGAACCTGGTTTGATCAAGT+TGG 0.422430 2.3:+48458473 MS.gene051178:CDS
CAATCATTTGAAGAATGAAT+GGG 0.424161 2.3:+48458022 MS.gene051178:CDS
TTCCCAATGATTTCACAATC+AGG 0.429166 2.3:-48457435 None:intergenic
TGGGAATCCAAAGTCATTTG+TGG 0.432048 2.3:+48457452 MS.gene051178:CDS
GGCGTTCAGGCAAGCCAGAC+TGG 0.443599 2.3:+48458597 MS.gene051178:CDS
TCTTCAATGAGTTTGTGTTT+AGG 0.444396 2.3:+48458951 MS.gene051178:CDS
CGAAGTCAGGAGACACAAAA+TGG 0.444863 2.3:+48458720 MS.gene051178:CDS
AGGATCATTCAGGATTAACT+TGG 0.448406 2.3:+48458810 MS.gene051178:CDS
GAAGCAGGGGAGGAGATTAT+GGG 0.448431 2.3:+48458848 MS.gene051178:CDS
ATTCCGATGGAGGTGAAATA+CGG 0.449887 2.3:+48457895 MS.gene051178:CDS
TTCAAGAGATGGTGGATGCT+GGG 0.453587 2.3:+48458330 MS.gene051178:CDS
GCGGTTAGATTCACCGCCAT+TGG 0.453693 2.3:-48455053 None:intergenic
TTTGATCTCCTTGATTCCGA+TGG 0.453893 2.3:+48457882 MS.gene051178:CDS
GCTCCAAATGCTGGTAGTAA+TGG 0.459212 2.3:+48457645 MS.gene051178:CDS
GAATTCAGTGGAAAGTCTAT+AGG 0.459727 2.3:+48458392 MS.gene051178:CDS
TTTAGCAGTAAAGGCTGGTA+AGG 0.460163 2.3:+48458364 MS.gene051178:CDS
TACCTGATTGTGAAATCATT+GGG 0.460436 2.3:+48457433 MS.gene051178:CDS
TGATTGAAATTCTTCTGTGC+AGG 0.460517 2.3:-48458005 None:intergenic
AATAAGAAAGTGACGAAGTC+AGG 0.461922 2.3:+48458707 MS.gene051178:CDS
GTAACTGCTTTCCAGGAAGC+AGG 0.462729 2.3:+48458833 MS.gene051178:CDS
TAAAGCGGAGGAGGTTGGTA+TGG 0.464313 2.3:-48457696 None:intergenic
TACAGTAGTTAAGGCAGATA+AGG 0.467853 2.3:+48459021 MS.gene051178:CDS
GAATGAATGGGAAATTATGC+TGG 0.470378 2.3:+48458034 MS.gene051178:CDS
CCGTTTCTATGAAGCAATTG+AGG 0.474581 2.3:+48457944 MS.gene051178:CDS
AAGGCAAGGGTTACTGCAAA+AGG 0.476738 2.3:+48457810 MS.gene051178:CDS
GTTCCCATCGTAAGGAAGAA+TGG 0.477384 2.3:+48458206 MS.gene051178:CDS
GCTCAAAATGCTGGTAGTAA+TGG 0.484784 2.3:+48457555 MS.gene051178:CDS
TTCGTCACTTTCTTATTGCA+CGG 0.485857 2.3:-48458701 None:intergenic
TGTTGTAAAGCGGAGGAGGT+TGG 0.489573 2.3:-48457611 None:intergenic
AATGATCCTGGATTTGAGCT+TGG 0.492318 2.3:-48458796 None:intergenic
AAGTTAATCCTGAATGATCC+TGG 0.493959 2.3:-48458808 None:intergenic
TAGGGATTTAAAGCAGCTAT+AGG 0.496621 2.3:-48457768 None:intergenic
TTTCACCTCCATCGGAATCA+AGG 0.500395 2.3:-48457890 None:intergenic
TATGCTGGATTTAAATTCAA+CGG 0.500855 2.3:+48458049 MS.gene051178:CDS
TACCCGTATTTCACCTCCAT+CGG 0.501159 2.3:-48457898 None:intergenic
GCTATAGGTATTACACGTGC+TGG 0.503122 2.3:-48457753 None:intergenic
GCTATTCCGGCGATAATCGC+CGG 0.503326 2.3:+48455080 MS.gene051178:CDS
TAGATGCAACCAGGAGTTTG+AGG 0.505007 2.3:+48458751 MS.gene051178:CDS
AATTTGGCTGCTCCAAATGC+TGG 0.507899 2.3:+48457636 MS.gene051178:CDS
TGCTATCCTTGATGTTATTG+GGG 0.509422 2.3:+48458160 MS.gene051178:CDS
AGCGGAGGAGGTTGGTATGG+AGG 0.511425 2.3:-48457693 None:intergenic
GATTATTATGGTGCTTAACA+TGG 0.514700 2.3:+48457401 MS.gene051178:CDS
CGGTTTGGCGTTGACGTCGC+CGG 0.514843 2.3:-48455099 None:intergenic
ATCCTTCAGTTCCCATCGTA+AGG 0.516057 2.3:+48458198 MS.gene051178:CDS
ACGTCGCCGGCGATTATCGC+CGG 0.516823 2.3:-48455086 None:intergenic
TTCTATGAAGCAATTGAGGT+TGG 0.517168 2.3:+48457948 MS.gene051178:CDS
GTGTCTCAAATTAAAGATGA+AGG 0.518676 2.3:+48458569 MS.gene051178:CDS
ATTCCATTCTTCCTTACGAT+GGG 0.519102 2.3:-48458209 None:intergenic
ACAGTCTCAATGTCACTGAT+AGG 0.519707 2.3:-48458128 None:intergenic
GATCTCCTTGATTCCGATGG+AGG 0.519739 2.3:+48457885 MS.gene051178:CDS
CTCAACGACCGAGTCAATAC+CGG 0.520608 2.3:+48455239 MS.gene051178:CDS
TATAACAATGCTCGTGGAGA+TGG 0.523700 2.3:+48457846 MS.gene051178:CDS
CGACCTTTGTAAAGCGGAGG+AGG 0.525294 2.3:-48457705 None:intergenic
TCAGGGTAGGTGGGCCATCA+AGG 0.528250 2.3:+48457791 MS.gene051178:CDS
CTGAAGGAGAATTGTTGTCT+AGG 0.528586 2.3:-48458104 None:intergenic
AATTTGGCTGCTCAAAATGC+TGG 0.530811 2.3:+48457546 MS.gene051178:CDS
TATCGCCGGAATAGCGTTTG+CGG 0.533761 2.3:-48455072 None:intergenic
CATTCCATTCTTCCTTACGA+TGG 0.533999 2.3:-48458210 None:intergenic
GAGCTTTGCCCAGATGAGGA+TGG 0.534821 2.3:+48458074 MS.gene051178:CDS
CCTGGATTTGAGCTTGGAGA+AGG 0.534963 2.3:-48458790 None:intergenic
AATCACATTCCTCAAACTCC+TGG 0.536282 2.3:-48458760 None:intergenic
ATTTCTAAGGACATCACTCA+TGG 0.537700 2.3:+48458518 MS.gene051178:CDS
GAGAACTTGAAGTAACGGTT+TGG 0.539039 2.3:-48455114 None:intergenic
GTATGTGTTGAAGTATGAAC+AGG 0.543799 2.3:+48458889 MS.gene051178:CDS
ATGGCCCACCTACCCTGATA+GGG 0.544473 2.3:-48457786 None:intergenic
AAAGTTTACTTGATATCGAA+AGG 0.544592 2.3:+48457972 MS.gene051178:CDS
TAAATCCCTATCAGGGTAGG+TGG 0.547460 2.3:+48457781 MS.gene051178:CDS
GTAGGTGGGCCATCAAGGCA+AGG 0.549490 2.3:+48457796 MS.gene051178:CDS
TTCCTTACGATGGGAACTGA+AGG 0.549709 2.3:-48458200 None:intergenic
TGGTATTGAGGTTGAACTGT+TGG 0.550725 2.3:-48457591 None:intergenic
TTTCCCAACTTGATCAAACC+AGG 0.553038 2.3:-48458477 None:intergenic
AGGCTCAGACCTTAAGAACC+TGG 0.553217 2.3:+48458459 MS.gene051178:CDS
CTTTGTAAAGCGGAGGAGGT+TGG 0.553943 2.3:-48457701 None:intergenic
AGAGTGTTGAGCTAACACTT+TGG 0.559856 2.3:+48458276 MS.gene051178:CDS
TGGAATGGAAACACTGAGAA+GGG 0.560059 2.3:+48458226 MS.gene051178:CDS
CGCCGCTATAACAATGCTCG+TGG 0.561907 2.3:+48457840 MS.gene051178:CDS
CCTTCTCCAAGCTCAAATCC+AGG 0.562294 2.3:+48458790 MS.gene051178:CDS
CCTCAATTGCTTCATAGAAA+CGG 0.565250 2.3:-48457944 None:intergenic
CATCGTAAGGAAGAATGGAA+TGG 0.565891 2.3:+48458211 MS.gene051178:CDS
ATGGAATGGAAACACTGAGA+AGG 0.567325 2.3:+48458225 MS.gene051178:CDS
TGCTTTCCAGGAAGCAGGGG+AGG 0.568330 2.3:+48458838 MS.gene051178:CDS
CCTCCGCTTTACAAAGGTCG+TGG 0.571787 2.3:+48457708 MS.gene051178:CDS
TTGCCTGATAACACTGTGGC+TGG 0.572437 2.3:+48457501 MS.gene051178:CDS
AAATTAAAGATGAAGGTCTA+GGG 0.572849 2.3:+48458576 MS.gene051178:CDS
TAACTGCTTTCCAGGAAGCA+GGG 0.573726 2.3:+48458834 MS.gene051178:CDS
TCAAGAGATGGTGGATGCTG+GGG 0.574359 2.3:+48458331 MS.gene051178:CDS
GGTTGAGCTTTGCCCAGATG+AGG 0.577862 2.3:+48458070 MS.gene051178:CDS
GCTGCTTTAAATCCCTATCA+GGG 0.580315 2.3:+48457774 MS.gene051178:CDS
TGGTATGGAGGTTGAACTGT+TGG 0.582038 2.3:-48457681 None:intergenic
ATGTCGAGAACTTGAAGTAA+CGG 0.582274 2.3:-48455119 None:intergenic
ATCGGTCCTCATGAATGATA+CGG 0.583512 2.3:-48458636 None:intergenic
GGAACCTTGCTTAACTCGAC+CGG 0.584296 2.3:-48455258 None:intergenic
CAAGCTACAATCACTGCCTA+CGG 0.586389 2.3:-48459093 None:intergenic
GTATAGAACCATCCTCATCT+GGG 0.586999 2.3:-48458082 None:intergenic
AATGTCACTGATAGGTCTGA+AGG 0.587612 2.3:-48458120 None:intergenic
ATTATATAATGACGAACAGA+AGG 0.587920 2.3:+48458991 MS.gene051178:CDS
TTTCTAAGGACATCACTCAT+GGG 0.588441 2.3:+48458519 MS.gene051178:CDS
AACTGCTTTCCAGGAAGCAG+GGG 0.589254 2.3:+48458835 MS.gene051178:CDS
AGGACAAAAGCTTCAAGAGA+TGG 0.592318 2.3:+48458319 MS.gene051178:CDS
TTCCGATGGAGGTGAAATAC+GGG 0.595001 2.3:+48457896 MS.gene051178:CDS
GAAGAAGACGGTAACGCTGT+TGG 0.595499 2.3:-48455172 None:intergenic
GGTAAGGTTAATGAATTCAG+TGG 0.596983 2.3:+48458380 MS.gene051178:CDS
ACAAAAGCTTCAAGAGATGG+TGG 0.598927 2.3:+48458322 MS.gene051178:CDS
AGCTGTGTAACAAAATGTAT+CGG 0.599323 2.3:-48458654 None:intergenic
TGAATTATTCTGCAGAGAGT+AGG 0.600929 2.3:+48459044 MS.gene051178:CDS
CTCCACGAGCATTGTTATAG+CGG 0.600995 2.3:-48457842 None:intergenic
CATAGCGTGATGAGACGAAA+CGG 0.603251 2.3:-48455204 None:intergenic
TAACTCGACCGGTATTGACT+CGG 0.604843 2.3:-48455247 None:intergenic
TAGGTGGGCCATCAAGGCAA+GGG 0.604948 2.3:+48457797 MS.gene051178:CDS
TCACAACCCCAATAACATCA+AGG 0.606648 2.3:-48458166 None:intergenic
CTTTAAATCCCTATCAGGGT+AGG 0.611287 2.3:+48457778 MS.gene051178:CDS
TAATACTTGCGATTCTGAAG+CGG 0.611376 2.3:-48455311 None:intergenic
GTCGATCTCCAATCATCAGA+GGG 0.611616 2.3:-48458679 None:intergenic
GGATCATTCAGGATTAACTT+GGG 0.613069 2.3:+48458811 MS.gene051178:CDS
TTCTTAAGGTCTGAGCCTCA+GGG 0.623006 2.3:-48458454 None:intergenic
GTTTAGGCTGAAAATCAAAG+AGG 0.625551 2.3:+48458967 MS.gene051178:CDS
GGTGAATTCTGCAACAGGGA+AGG 0.626099 2.3:+48458299 MS.gene051178:CDS
TTCTAAGGACATCACTCATG+GGG 0.629562 2.3:+48458520 MS.gene051178:CDS
GCCAGACTGGATAACAATGA+GGG 0.637901 2.3:+48458610 MS.gene051178:CDS
GGTCGATCTCCAATCATCAG+AGG 0.638969 2.3:-48458680 None:intergenic
AAATCCCTATCAGGGTAGGT+GGG 0.640512 2.3:+48457782 MS.gene051178:CDS
CAACCTCCTCCGCTTTACAA+AGG 0.641625 2.3:+48457702 MS.gene051178:CDS
GTGATGAGACGAAACGGCGT+CGG 0.651118 2.3:-48455198 None:intergenic
AGCCAGACTGGATAACAATG+AGG 0.656016 2.3:+48458609 MS.gene051178:CDS
CAGCCTTTACTGCTAAAATG+GGG 0.656745 2.3:-48458358 None:intergenic
GCACCACGACCTTTGTAAAG+CGG 0.657064 2.3:-48457711 None:intergenic
GTAATCGAGAAGCTGAACGA+TGG 0.661747 2.3:-48455279 None:intergenic
CCACGACCTTTGTAAAGCGG+AGG 0.662907 2.3:-48457708 None:intergenic
GCAGTGTGATAGATGCAACC+AGG 0.664374 2.3:+48458742 MS.gene051178:CDS
TGTGTTGAAGTATGAACAGG+AGG 0.677244 2.3:+48458892 MS.gene051178:CDS
AATACCGGTCGAGTTAAGCA+AGG 0.679282 2.3:+48455254 MS.gene051178:CDS
GGGCAACCGTATCATTCATG+AGG 0.684770 2.3:+48458630 MS.gene051178:CDS
AGTGTTGAGCTAACACTTTG+GGG 0.692814 2.3:+48458278 MS.gene051178:CDS
CATAAATCCAGATTTCCCTG+AGG 0.709312 2.3:+48458439 MS.gene051178:CDS
TTGGGGTGAATTCTGCAACA+GGG 0.712179 2.3:+48458295 MS.gene051178:CDS
CGGCGTCGGAGAGAAGAAGA+CGG 0.718695 2.3:-48455184 None:intergenic
AAGCAGGGGAGGAGATTATG+GGG 0.738154 2.3:+48458849 MS.gene051178:CDS
TCTAAGGACATCACTCATGG+GGG 0.753824 2.3:+48458521 MS.gene051178:CDS
AGCATTGCCTGATAACACTG+TGG 0.782811 2.3:+48457497 MS.gene051178:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTATTATTAATATTTC+TGG - chr2.3:48457532-48457551 None:intergenic 10.0%
!! CAGAAATATTAATAATAATT+TGG + chr2.3:48457530-48457549 MS.gene051178:CDS 10.0%
!! TTAAGTGATTAATTGATTAT+CGG + chr2.3:48455374-48455393 MS.gene051178:intron 15.0%
!! ATGTATCATCTATAATGTTT+AGG - chr2.3:48457261-48457280 None:intergenic 20.0%
!! TGTATCATCTATAATGTTTA+GGG - chr2.3:48457260-48457279 None:intergenic 20.0%
!!! AACATTTTAGGTTGAAAATT+TGG - chr2.3:48456623-48456642 None:intergenic 20.0%
!!! AATGTTTTAGGTTGAAATTT+TGG - chr2.3:48457045-48457064 None:intergenic 20.0%
!!! ATTTTCAACCTAAAATGTTA+TGG + chr2.3:48456624-48456643 MS.gene051178:intron 20.0%
!!! TGTATCATCAATAACATTTT+AGG - chr2.3:48456635-48456654 None:intergenic 20.0%
!!! TGTGATTTTCACTTTTAATT+AGG + chr2.3:48455588-48455607 MS.gene051178:intron 20.0%
!!! TTATGTACATTTCACTTTTT+AGG + chr2.3:48455912-48455931 MS.gene051178:intron 20.0%
! AAAGTTTACTTGATATCGAA+AGG + chr2.3:48457972-48457991 MS.gene051178:CDS 25.0%
! AAATTAAAGATGAAGGTCTA+GGG + chr2.3:48458576-48458595 MS.gene051178:CDS 25.0%
! AAGTTGCATTTGTAAGAATT+AGG + chr2.3:48455642-48455661 MS.gene051178:intron 25.0%
! AATATCACATTTCATCAATG+AGG - chr2.3:48455676-48455695 None:intergenic 25.0%
! ATTATATAATGACGAACAGA+AGG + chr2.3:48458991-48459010 MS.gene051178:CDS 25.0%
! CAATCATTTGAAGAATGAAT+GGG + chr2.3:48458022-48458041 MS.gene051178:CDS 25.0%
! CATTTGTAAGAATTAGGTTA+TGG + chr2.3:48455648-48455667 MS.gene051178:intron 25.0%
! GAACAATTAGTGTATGAATT+AGG + chr2.3:48455489-48455508 MS.gene051178:intron 25.0%
! TACATAAGTGTTATCTTCTT+TGG + chr2.3:48457088-48457107 MS.gene051178:intron 25.0%
! TATGCTGGATTTAAATTCAA+CGG + chr2.3:48458049-48458068 MS.gene051178:CDS 25.0%
! TCAATCATTTGAAGAATGAA+TGG + chr2.3:48458021-48458040 MS.gene051178:CDS 25.0%
! TTAGTGATAGTATTAGGATA+TGG + chr2.3:48456705-48456724 MS.gene051178:intron 25.0%
! TTAGTGTATGAATTAGGATA+TGG + chr2.3:48455495-48455514 MS.gene051178:intron 25.0%
!! AAGTTGCATTTCTAAGAATT+AGG + chr2.3:48455805-48455824 MS.gene051178:intron 25.0%
!! ATAATGTTTAGGGTGAAAAT+TGG - chr2.3:48457250-48457269 None:intergenic 25.0%
!! CAAATTTTGAACTAAAGCAA+TGG - chr2.3:48456451-48456470 None:intergenic 25.0%
!! CATTTCTAAGAATTAGGATA+TGG + chr2.3:48455811-48455830 MS.gene051178:intron 25.0%
!! GTGATAGTTAAATTACGTTT+TGG + chr2.3:48456745-48456764 MS.gene051178:intron 25.0%
!! TTACGTGCATTTCAATTTTT+AGG + chr2.3:48455752-48455771 MS.gene051178:intron 25.0%
AACATTGTAGATGATGCATT+TGG + chr2.3:48457059-48457078 MS.gene051178:intron 30.0%
AACGTTCTGATAGATGTATT+TGG + chr2.3:48455956-48455975 MS.gene051178:intron 30.0%
AATGCTATCCTTGATGTTAT+TGG + chr2.3:48458158-48458177 MS.gene051178:CDS 30.0%
AATGTTATGGATGATGCATT+TGG + chr2.3:48456853-48456872 MS.gene051178:intron 30.0%
AGATGATACATTAGAGCTTA+TGG + chr2.3:48457270-48457289 MS.gene051178:intron 30.0%
AGCTGTGTAACAAAATGTAT+CGG - chr2.3:48458657-48458676 None:intergenic 30.0%
ATACCTGATTGTGAAATCAT+TGG + chr2.3:48457432-48457451 MS.gene051178:CDS 30.0%
ATGCTATCCTTGATGTTATT+GGG + chr2.3:48458159-48458178 MS.gene051178:CDS 30.0%
CAAATTAAAGATGAAGGTCT+AGG + chr2.3:48458575-48458594 MS.gene051178:CDS 30.0%
CATCACTGAGTTATCATAAA+GGG - chr2.3:48456499-48456518 None:intergenic 30.0%
GAGTGATTAGTGATAGTATT+AGG + chr2.3:48456699-48456718 MS.gene051178:intron 30.0%
GATTATTATGGTGCTTAACA+TGG + chr2.3:48457401-48457420 MS.gene051178:CDS 30.0%
GATTTCACAATCAGGTATTA+TGG - chr2.3:48457430-48457449 None:intergenic 30.0%
GTGTCTCAAATTAAAGATGA+AGG + chr2.3:48458569-48458588 MS.gene051178:CDS 30.0%
GTTATCACATTTCATCAACA+AGG - chr2.3:48455839-48455858 None:intergenic 30.0%
TACCTGATTGTGAAATCATT+GGG + chr2.3:48457433-48457452 MS.gene051178:CDS 30.0%
TAGGCGAATGATTAATGTTA+TGG + chr2.3:48456910-48456929 MS.gene051178:intron 30.0%
TCATCACTGAGTTATCATAA+AGG - chr2.3:48456500-48456519 None:intergenic 30.0%
TCCGCTTTACAACAAAAATT+TGG + chr2.3:48457620-48457639 MS.gene051178:CDS 30.0%
TCTTCAATGAGTTTGTGTTT+AGG + chr2.3:48458951-48458970 MS.gene051178:CDS 30.0%
TGATTAATGTTATGGAACCT+CGG + chr2.3:48456918-48456937 MS.gene051178:intron 30.0%
TTCCTTGTACAGGATTATTA+TGG + chr2.3:48457389-48457408 MS.gene051178:intron 30.0%
TTGAATCTAAAGGACAATTC+TGG + chr2.3:48458251-48458270 MS.gene051178:CDS 30.0%
! AATGCATCATAACTGACTTT+AGG + chr2.3:48457325-48457344 MS.gene051178:intron 30.0%
! TGCATCATCCATAACATTTT+AGG - chr2.3:48456851-48456870 None:intergenic 30.0%
! TGCATCATCTACAATGTTTT+AGG - chr2.3:48457057-48457076 None:intergenic 30.0%
!! AAATTTTTGTTGTAAAGCGG+AGG - chr2.3:48457621-48457640 None:intergenic 30.0%
!! ATTTTATTTCCAAGTTCCGT+AGG + chr2.3:48459077-48459096 MS.gene051178:CDS 30.0%
!! GCCAAATTTTTGTTGTAAAG+CGG - chr2.3:48457624-48457643 None:intergenic 30.0%
AAGTTAATCCTGAATGATCC+TGG - chr2.3:48458811-48458830 None:intergenic 35.0%
AATAAGAAAGTGACGAAGTC+AGG + chr2.3:48458707-48458726 MS.gene051178:CDS 35.0%
AGGATCATTCAGGATTAACT+TGG + chr2.3:48458810-48458829 MS.gene051178:CDS 35.0%
ATGAGTGATGTCCTTAGAAA+TGG - chr2.3:48458519-48458538 None:intergenic 35.0%
ATGTCGAGAACTTGAAGTAA+CGG - chr2.3:48455122-48455141 None:intergenic 35.0%
ATTATCATAGTTCACTACCG+AGG - chr2.3:48456938-48456957 None:intergenic 35.0%
ATTCCATTCTTCCTTACGAT+GGG - chr2.3:48458212-48458231 None:intergenic 35.0%
CACCATAATAATCCTGTACA+AGG - chr2.3:48457394-48457413 None:intergenic 35.0%
CCTCAATTGCTTCATAGAAA+CGG - chr2.3:48457947-48457966 None:intergenic 35.0%
CTCAAAATGCTGGTAGTAAT+GGG + chr2.3:48457556-48457575 MS.gene051178:CDS 35.0%
GAATGAATGGGAAATTATGC+TGG + chr2.3:48458034-48458053 MS.gene051178:CDS 35.0%
GAATTCAGTGGAAAGTCTAT+AGG + chr2.3:48458392-48458411 MS.gene051178:CDS 35.0%
GCTATAACACTTTATTGTGG+CGG - chr2.3:48456309-48456328 None:intergenic 35.0%
GGATCATTCAGGATTAACTT+GGG + chr2.3:48458811-48458830 MS.gene051178:CDS 35.0%
GGTAAGGTTAATGAATTCAG+TGG + chr2.3:48458380-48458399 MS.gene051178:CDS 35.0%
GGTGAAGATTACAGTAGTTA+AGG + chr2.3:48459012-48459031 MS.gene051178:CDS 35.0%
GTAACTTCAGTGAAGAATTG+TGG + chr2.3:48457136-48457155 MS.gene051178:intron 35.0%
GTATGTGTTGAAGTATGAAC+AGG + chr2.3:48458889-48458908 MS.gene051178:CDS 35.0%
GTCAAATAGCTGTCAAAACA+TGG - chr2.3:48456076-48456095 None:intergenic 35.0%
GTTTAGGCTGAAAATCAAAG+AGG + chr2.3:48458967-48458986 MS.gene051178:CDS 35.0%
TACAGTAGTTAAGGCAGATA+AGG + chr2.3:48459021-48459040 MS.gene051178:CDS 35.0%
TCTGAATCCACAAATGACTT+TGG - chr2.3:48457462-48457481 None:intergenic 35.0%
TGATTGAAATTCTTCTGTGC+AGG - chr2.3:48458008-48458027 None:intergenic 35.0%
TGCTATCCTTGATGTTATTG+GGG + chr2.3:48458160-48458179 MS.gene051178:CDS 35.0%
TGCTTCTCTATCCATTTCTA+AGG + chr2.3:48458505-48458524 MS.gene051178:CDS 35.0%
TGGTGCAGTTATGAAAAATG+AGG + chr2.3:48457728-48457747 MS.gene051178:CDS 35.0%
TGTTAGATCGTGGAAAATAG+TGG + chr2.3:48455988-48456007 MS.gene051178:intron 35.0%
TTCCCAATGATTTCACAATC+AGG - chr2.3:48457438-48457457 None:intergenic 35.0%
TTCTATGAAGCAATTGAGGT+TGG + chr2.3:48457948-48457967 MS.gene051178:CDS 35.0%
TTGATCAAACCAGGTTCTTA+AGG - chr2.3:48458471-48458490 None:intergenic 35.0%
TTGTCAAATAGCGACTATAG+CGG - chr2.3:48456333-48456352 None:intergenic 35.0%
! ACATAAGTGTTAGCTTCTTG+TGG + chr2.3:48456883-48456902 MS.gene051178:intron 35.0%
! AGTTTTGCGTATCTCATTCT+TGG - chr2.3:48458549-48458568 None:intergenic 35.0%
! ATTTCTAAGGACATCACTCA+TGG + chr2.3:48458518-48458537 MS.gene051178:CDS 35.0%
! GTTTTGCGTATCTCATTCTT+GGG - chr2.3:48458548-48458567 None:intergenic 35.0%
! TAATACTTGCGATTCTGAAG+CGG - chr2.3:48455314-48455333 None:intergenic 35.0%
! TAGGGATTTAAAGCAGCTAT+AGG - chr2.3:48457771-48457790 None:intergenic 35.0%
! TTCGTCACTTTCTTATTGCA+CGG - chr2.3:48458704-48458723 None:intergenic 35.0%
! TTTCTAAGGACATCACTCAT+GGG + chr2.3:48458519-48458538 MS.gene051178:CDS 35.0%
!! ATGCAACTTCTAGAACGATT+AGG - chr2.3:48455794-48455813 None:intergenic 35.0%
!! CAGAAGTGCTTTAGTTCAAA+TGG + chr2.3:48456156-48456175 MS.gene051178:intron 35.0%
!! GTGTTTGTTTTTCCTTGTAC+AGG + chr2.3:48457379-48457398 MS.gene051178:intron 35.0%
!! GTTCAAATGGATTACATCAG+CGG + chr2.3:48456169-48456188 MS.gene051178:intron 35.0%
!! TTTCCCCATTTTAGCAGTAA+AGG + chr2.3:48458355-48458374 MS.gene051178:CDS 35.0%
!!! GAGAAGGGTTTTGAATCTAA+AGG + chr2.3:48458241-48458260 MS.gene051178:CDS 35.0%
!!! TTGTGTGCGTTTTGCTTTTT+AGG + chr2.3:48455424-48455443 MS.gene051178:intron 35.0%
AATCACATTCCTCAAACTCC+TGG - chr2.3:48458763-48458782 None:intergenic 40.0%
AATGATCCTGGATTTGAGCT+TGG - chr2.3:48458799-48458818 None:intergenic 40.0%
AATGTCACTGATAGGTCTGA+AGG - chr2.3:48458123-48458142 None:intergenic 40.0%
AATTTGGCTGCTCAAAATGC+TGG + chr2.3:48457546-48457565 MS.gene051178:CDS 40.0%
ACAAAAGCTTCAAGAGATGG+TGG + chr2.3:48458322-48458341 MS.gene051178:CDS 40.0%
ACAGTCTCAATGTCACTGAT+AGG - chr2.3:48458131-48458150 None:intergenic 40.0%
ACCAGCCTTTACTGCTAAAA+TGG - chr2.3:48458363-48458382 None:intergenic 40.0%
AGGACAAAAGCTTCAAGAGA+TGG + chr2.3:48458319-48458338 MS.gene051178:CDS 40.0%
ATCGGTCCTCATGAATGATA+CGG - chr2.3:48458639-48458658 None:intergenic 40.0%
ATGGAATGGAAACACTGAGA+AGG + chr2.3:48458225-48458244 MS.gene051178:CDS 40.0%
ATTCCGATGGAGGTGAAATA+CGG + chr2.3:48457895-48457914 MS.gene051178:CDS 40.0%
CAGCCTTTACTGCTAAAATG+GGG - chr2.3:48458361-48458380 None:intergenic 40.0%
CATAAATCCAGATTTCCCTG+AGG + chr2.3:48458439-48458458 MS.gene051178:CDS 40.0%
CATCGTAAGGAAGAATGGAA+TGG + chr2.3:48458211-48458230 MS.gene051178:CDS 40.0%
CATTCCATTCTTCCTTACGA+TGG - chr2.3:48458213-48458232 None:intergenic 40.0%
CCAGCCTTTACTGCTAAAAT+GGG - chr2.3:48458362-48458381 None:intergenic 40.0%
CCGTTTCTATGAAGCAATTG+AGG + chr2.3:48457944-48457963 MS.gene051178:CDS 40.0%
CTCCAAATGCTGGTAGTAAT+GGG + chr2.3:48457646-48457665 MS.gene051178:CDS 40.0%
CTGAAGGAGAATTGTTGTCT+AGG - chr2.3:48458107-48458126 None:intergenic 40.0%
CTTTAAATCCCTATCAGGGT+AGG + chr2.3:48457778-48457797 MS.gene051178:CDS 40.0%
GAGAACTTGAAGTAACGGTT+TGG - chr2.3:48455117-48455136 None:intergenic 40.0%
GCTCAAAATGCTGGTAGTAA+TGG + chr2.3:48457555-48457574 MS.gene051178:CDS 40.0%
GGCGCTATAACACTTTATTG+TGG - chr2.3:48456312-48456331 None:intergenic 40.0%
GTATAGAACCATCCTCATCT+GGG - chr2.3:48458085-48458104 None:intergenic 40.0%
TATAACAATGCTCGTGGAGA+TGG + chr2.3:48457846-48457865 MS.gene051178:CDS 40.0%
TCACAACCCCAATAACATCA+AGG - chr2.3:48458169-48458188 None:intergenic 40.0%
TGGAATGGAAACACTGAGAA+GGG + chr2.3:48458226-48458245 MS.gene051178:CDS 40.0%
TGGGAATCCAAAGTCATTTG+TGG + chr2.3:48457452-48457471 MS.gene051178:CDS 40.0%
TGTGTTGAAGTATGAACAGG+AGG + chr2.3:48458892-48458911 MS.gene051178:CDS 40.0%
TTTAGCAGTAAAGGCTGGTA+AGG + chr2.3:48458364-48458383 MS.gene051178:CDS 40.0%
TTTCCCAACTTGATCAAACC+AGG - chr2.3:48458480-48458499 None:intergenic 40.0%
TTTGATCTCCTTGATTCCGA+TGG + chr2.3:48457882-48457901 MS.gene051178:CDS 40.0%
! AGAACCTGGTTTGATCAAGT+TGG + chr2.3:48458473-48458492 MS.gene051178:CDS 40.0%
! AGCTGCTTTAAATCCCTATC+AGG + chr2.3:48457773-48457792 MS.gene051178:CDS 40.0%
! AGTGTTGAGCTAACACTTTG+GGG + chr2.3:48458278-48458297 MS.gene051178:CDS 40.0%
! GAACCTGGTTTGATCAAGTT+GGG + chr2.3:48458474-48458493 MS.gene051178:CDS 40.0%
! GAATCAGTGTTGTTAGATCG+TGG + chr2.3:48455978-48455997 MS.gene051178:intron 40.0%
! GCTGCTTTAAATCCCTATCA+GGG + chr2.3:48457774-48457793 MS.gene051178:CDS 40.0%
! GTTAGCTTCTTCTATCTCCT+GGG + chr2.3:48456675-48456694 MS.gene051178:intron 40.0%
! TGGTATTGAGGTTGAACTGT+TGG - chr2.3:48457594-48457613 None:intergenic 40.0%
! TGTTAGCTTCTTCTATCTCC+TGG + chr2.3:48456674-48456693 MS.gene051178:intron 40.0%
! TTCTAAGGACATCACTCATG+GGG + chr2.3:48458520-48458539 MS.gene051178:CDS 40.0%
!! AGAGTGTTGAGCTAACACTT+TGG + chr2.3:48458276-48458295 MS.gene051178:CDS 40.0%
!! GAGTGTTGAGCTAACACTTT+GGG + chr2.3:48458277-48458296 MS.gene051178:CDS 40.0%
!! GTAGTAATGGGCAGAATTTC+AGG + chr2.3:48457568-48457587 MS.gene051178:CDS 40.0%
!! TTTTTGTTGTAAAGCGGAGG+AGG - chr2.3:48457618-48457637 None:intergenic 40.0%
AAATCCCTATCAGGGTAGGT+GGG + chr2.3:48457782-48457801 MS.gene051178:CDS 45.0%
AACTTGGGTAACTGCTTTCC+AGG + chr2.3:48458826-48458845 MS.gene051178:CDS 45.0%
AAGGCAAGGGTTACTGCAAA+AGG + chr2.3:48457810-48457829 MS.gene051178:CDS 45.0%
AATACCGGTCGAGTTAAGCA+AGG + chr2.3:48455254-48455273 MS.gene051178:CDS 45.0%
AATTTGGCTGCTCCAAATGC+TGG + chr2.3:48457636-48457655 MS.gene051178:CDS 45.0%
AGCATTGCCTGATAACACTG+TGG + chr2.3:48457497-48457516 MS.gene051178:CDS 45.0%
AGCCAGACTGGATAACAATG+AGG + chr2.3:48458609-48458628 MS.gene051178:CDS 45.0%
ATCCTTCAGTTCCCATCGTA+AGG + chr2.3:48458198-48458217 MS.gene051178:CDS 45.0%
CAGGAGGATGATGAGAAGTT+TGG + chr2.3:48458908-48458927 MS.gene051178:CDS 45.0%
CATAGCGTGATGAGACGAAA+CGG - chr2.3:48455207-48455226 None:intergenic 45.0%
CGAAGTCAGGAGACACAAAA+TGG + chr2.3:48458720-48458739 MS.gene051178:CDS 45.0%
CTATCACTAATCACTCTCCC+AGG - chr2.3:48456695-48456714 None:intergenic 45.0%
GCCAGACTGGATAACAATGA+GGG + chr2.3:48458610-48458629 MS.gene051178:CDS 45.0%
GCTATAGGTATTACACGTGC+TGG - chr2.3:48457756-48457775 None:intergenic 45.0%
GCTCAAATCCAGGATCATTC+AGG + chr2.3:48458800-48458819 MS.gene051178:CDS 45.0%
GCTCCAAATGCTGGTAGTAA+TGG + chr2.3:48457645-48457664 MS.gene051178:CDS 45.0%
GGATTACATCAGCGGTACTA+TGG + chr2.3:48456177-48456196 MS.gene051178:intron 45.0%
GGTATAGAACCATCCTCATC+TGG - chr2.3:48458086-48458105 None:intergenic 45.0%
GTAATCGAGAAGCTGAACGA+TGG - chr2.3:48455282-48455301 None:intergenic 45.0%
GTCGATCTCCAATCATCAGA+GGG - chr2.3:48458682-48458701 None:intergenic 45.0%
GTTCCCATCGTAAGGAAGAA+TGG + chr2.3:48458206-48458225 MS.gene051178:CDS 45.0%
TAAATCCCTATCAGGGTAGG+TGG + chr2.3:48457781-48457800 MS.gene051178:CDS 45.0%
TAACTGCTTTCCAGGAAGCA+GGG + chr2.3:48458834-48458853 MS.gene051178:CDS 45.0%
TACCCGTATTTCACCTCCAT+CGG - chr2.3:48457901-48457920 None:intergenic 45.0%
TAGATGCAACCAGGAGTTTG+AGG + chr2.3:48458751-48458770 MS.gene051178:CDS 45.0%
TCAGGCAATGCTTTCTGAAC+TGG - chr2.3:48457489-48457508 None:intergenic 45.0%
TCTAACCGCAAACGCTATTC+CGG + chr2.3:48455067-48455086 MS.gene051178:CDS 45.0%
TCTAAGGACATCACTCATGG+GGG + chr2.3:48458521-48458540 MS.gene051178:CDS 45.0%
TGCCCATTACTACCAGCATT+TGG - chr2.3:48457561-48457580 None:intergenic 45.0%
TGGTATGGAGGTTGAACTGT+TGG - chr2.3:48457684-48457703 None:intergenic 45.0%
TTCCGATGGAGGTGAAATAC+GGG + chr2.3:48457896-48457915 MS.gene051178:CDS 45.0%
TTCCTTACGATGGGAACTGA+AGG - chr2.3:48458203-48458222 None:intergenic 45.0%
TTCTTAAGGTCTGAGCCTCA+GGG - chr2.3:48458457-48458476 None:intergenic 45.0%
TTGGGGTGAATTCTGCAACA+GGG + chr2.3:48458295-48458314 MS.gene051178:CDS 45.0%
TTTCACCTCCATCGGAATCA+AGG - chr2.3:48457893-48457912 None:intergenic 45.0%
! CTCCACGAGCATTGTTATAG+CGG - chr2.3:48457845-48457864 None:intergenic 45.0%
! GTTAGCTTCTTGTGGCTCTT+AGG + chr2.3:48456891-48456910 MS.gene051178:intron 45.0%
! TTTGGGGTGAATTCTGCAAC+AGG + chr2.3:48458294-48458313 MS.gene051178:CDS 45.0%
!! ACGCTGTTGGTGAGAGTTTT+TGG - chr2.3:48455162-48455181 None:intergenic 45.0%
!! CCCATTTTAGCAGTAAAGGC+TGG + chr2.3:48458359-48458378 MS.gene051178:CDS 45.0%
!! TAACTCGACCGGTATTGACT+CGG - chr2.3:48455250-48455269 None:intergenic 45.0%
!! TTCAAGAGATGGTGGATGCT+GGG + chr2.3:48458330-48458349 MS.gene051178:CDS 45.0%
AACTGCTTTCCAGGAAGCAG+GGG + chr2.3:48458835-48458854 MS.gene051178:CDS 50.0%
AAGCAGGGGAGGAGATTATG+GGG + chr2.3:48458849-48458868 MS.gene051178:CDS 50.0%
ACAGCTTGCCCTCTGATGAT+TGG + chr2.3:48458671-48458690 MS.gene051178:CDS 50.0%
AGGCTCAGACCTTAAGAACC+TGG + chr2.3:48458459-48458478 MS.gene051178:CDS 50.0%
CAACCTCCTCCGCTTTACAA+AGG + chr2.3:48457612-48457631 MS.gene051178:CDS 50.0%
CCTGGATTTGAGCTTGGAGA+AGG - chr2.3:48458793-48458812 None:intergenic 50.0%
CCTTCTCCAAGCTCAAATCC+AGG + chr2.3:48458790-48458809 MS.gene051178:CDS 50.0%
CTCAACGACCGAGTCAATAC+CGG + chr2.3:48455239-48455258 MS.gene051178:CDS 50.0%
CTTTGTAAAGCGGAGGAGGT+TGG - chr2.3:48457704-48457723 None:intergenic 50.0%
GAACCAGCCACAGTGTTATC+AGG - chr2.3:48457507-48457526 None:intergenic 50.0%
GAAGAAGACGGTAACGCTGT+TGG - chr2.3:48455175-48455194 None:intergenic 50.0%
GAAGCAGGGGAGGAGATTAT+GGG + chr2.3:48458848-48458867 MS.gene051178:CDS 50.0%
GATCTCCTTGATTCCGATGG+AGG + chr2.3:48457885-48457904 MS.gene051178:CDS 50.0%
GCACCACGACCTTTGTAAAG+CGG - chr2.3:48457714-48457733 None:intergenic 50.0%
GCAGTGTGATAGATGCAACC+AGG + chr2.3:48458742-48458761 MS.gene051178:CDS 50.0%
GCCCTCATTGTTATCCAGTC+TGG - chr2.3:48458614-48458633 None:intergenic 50.0%
GGAACCTTGCTTAACTCGAC+CGG - chr2.3:48455261-48455280 None:intergenic 50.0%
GGGCAACCGTATCATTCATG+AGG + chr2.3:48458630-48458649 MS.gene051178:CDS 50.0%
GGTCGATCTCCAATCATCAG+AGG - chr2.3:48458683-48458702 None:intergenic 50.0%
GGTGAATTCTGCAACAGGGA+AGG + chr2.3:48458299-48458318 MS.gene051178:CDS 50.0%
GTAACTGCTTTCCAGGAAGC+AGG + chr2.3:48458833-48458852 MS.gene051178:CDS 50.0%
GTTCTTAAGGTCTGAGCCTC+AGG - chr2.3:48458458-48458477 None:intergenic 50.0%
TATCGCCGGAATAGCGTTTG+CGG - chr2.3:48455075-48455094 None:intergenic 50.0%
TGCAGTAACCCTTGCCTTGA+TGG - chr2.3:48457808-48457827 None:intergenic 50.0%
TGTTGTAAAGCGGAGGAGGT+TGG - chr2.3:48457614-48457633 None:intergenic 50.0%
TTGCCTGATAACACTGTGGC+TGG + chr2.3:48457501-48457520 MS.gene051178:CDS 50.0%
!! CTTCAAGAGATGGTGGATGC+TGG + chr2.3:48458329-48458348 MS.gene051178:CDS 50.0%
!! TAAAGCGGAGGAGGTTGGTA+TGG - chr2.3:48457609-48457628 None:intergenic 50.0%
!! TCAAGAGATGGTGGATGCTG+GGG + chr2.3:48458331-48458350 MS.gene051178:CDS 50.0%
ATGGCCCACCTACCCTGATA+GGG - chr2.3:48457789-48457808 None:intergenic 55.0%
CCACGACCTTTGTAAAGCGG+AGG - chr2.3:48457711-48457730 None:intergenic 55.0%
CCTCCGCTTTACAAAGGTCG+TGG + chr2.3:48457708-48457727 MS.gene051178:CDS 55.0%
CGACCTTTGTAAAGCGGAGG+AGG - chr2.3:48457708-48457727 None:intergenic 55.0%
CGCCGCTATAACAATGCTCG+TGG + chr2.3:48457840-48457859 MS.gene051178:CDS 55.0%
GAGCTTTGCCCAGATGAGGA+TGG + chr2.3:48458074-48458093 MS.gene051178:CDS 55.0%
GCTATTCCGGCGATAATCGC+CGG + chr2.3:48455080-48455099 MS.gene051178:CDS 55.0%
GGAAGCAGGGGAGGAGATTA+TGG + chr2.3:48458847-48458866 MS.gene051178:CDS 55.0%
GGTTGAGCTTTGCCCAGATG+AGG + chr2.3:48458070-48458089 MS.gene051178:CDS 55.0%
GTCTGAGCCTCAGGGAAATC+TGG - chr2.3:48458449-48458468 None:intergenic 55.0%
GTGATGAGACGAAACGGCGT+CGG - chr2.3:48455201-48455220 None:intergenic 55.0%
TAATCTCCTCCCCTGCTTCC+TGG - chr2.3:48458847-48458866 None:intergenic 55.0%
TAGGTGGGCCATCAAGGCAA+GGG + chr2.3:48457797-48457816 MS.gene051178:CDS 55.0%
! GATGAAGGTCTAGGGCGTTC+AGG + chr2.3:48458584-48458603 MS.gene051178:CDS 55.0%
!! AGCGGAGGAGGTTGGTATTG+AGG - chr2.3:48457606-48457625 None:intergenic 55.0%
GATGGCCCACCTACCCTGAT+AGG - chr2.3:48457790-48457809 None:intergenic 60.0%
GTAGGTGGGCCATCAAGGCA+AGG + chr2.3:48457796-48457815 MS.gene051178:CDS 60.0%
TCAGGGTAGGTGGGCCATCA+AGG + chr2.3:48457791-48457810 MS.gene051178:CDS 60.0%
TGCTTTCCAGGAAGCAGGGG+AGG + chr2.3:48458838-48458857 MS.gene051178:CDS 60.0%
! CGGCGTCGGAGAGAAGAAGA+CGG - chr2.3:48455187-48455206 None:intergenic 60.0%
!! AGCGGAGGAGGTTGGTATGG+AGG - chr2.3:48457696-48457715 None:intergenic 60.0%
ACGTCGCCGGCGATTATCGC+CGG - chr2.3:48455089-48455108 None:intergenic 65.0%
GGCGTTCAGGCAAGCCAGAC+TGG + chr2.3:48458597-48458616 MS.gene051178:CDS 65.0%
!! CGGTTTGGCGTTGACGTCGC+CGG - chr2.3:48455102-48455121 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 48455056 48459105 48455056 ID=MS.gene051178
chr2.3 mRNA 48455056 48459105 48455056 ID=MS.gene051178.t1;Parent=MS.gene051178
chr2.3 exon 48455056 48455327 48455056 ID=MS.gene051178.t1.exon1;Parent=MS.gene051178.t1
chr2.3 CDS 48455056 48455327 48455056 ID=cds.MS.gene051178.t1;Parent=MS.gene051178.t1
chr2.3 exon 48457401 48459105 48457401 ID=MS.gene051178.t1.exon2;Parent=MS.gene051178.t1
chr2.3 CDS 48457401 48459105 48457401 ID=cds.MS.gene051178.t1;Parent=MS.gene051178.t1
Gene Sequence

>MS.gene051178

ATGGCGGTGAATCTAACCGCAAACGCTATTCCGGCGATAATCGCCGGCGACGTCAACGCCAAACCGTTACTTCAAGTTCTCGACATTGCAACAATCGTAAGCACCAAAAACTCTCACCAACAGCGTTACCGTCTTCTTCTCTCCGACGCCGTTTCGTCTCATCACGCTATGCTCGCTGCTCAACTCAACGACCGAGTCAATACCGGTCGAGTTAAGCAAGGTTCCATCGTTCAGCTTCTCGATTACATTTGCACTCCGCTTCAGAATCGCAAGTATTACTCTTCGCTTCGTTTTTTTGTTGCTTAATTTGTTCTTCGATTAAGTGATTAATTGATTATCGGTGTATTTAGATTGTTTCGATTTGAATTTTGTGTGCGTTTTGCTTTTTAGGTTAATTTAAGATGAATCTAGAACGTTCTAGAAGTTGCGTTTAGAACAATTAGTGTATGAATTAGGATATGGTACTTCGTTGATGAAATGTGATTGTTAAACTAAGTTTTAGTTTCTTGTTATAGTTGAAATTTGAATTTCATGTGATTTTCACTTTTAATTAGGTCTTTTCAAATTTGAACTTAAAACGTTCTAGAAGTTGCATTTGTAAGAATTAGGTTATGGAACCTCATTGATGAAATGTGATATTTGAACTAAGTTCTAGTTTCTTGAGATAGTTGAATTGAGATTTTTGAAATTTGAATTTTACGTGCATTTCAATTTTTAGGTCATTTCGAGTTTGAACCTAATCGTTCTAGAAGTTGCATTTCTAAGAATTAGGATATGGAACCTTGTTGATGAAATGTGATAACTGACTTTTAGTTTCTTGTGATAGTTTAATTAAGATTTTGTTGCAATTTGAATTTTATGTACATTTCACTTTTTAGGTCATTTTAATTTTGAACATAAAACGTTCTGATAGATGTATTTGGAATCAGTGTTGTTAGATCGTGGAAAATAGTGGCTATTTGACAAAATTTTGAACTGAAGTGTGTCGTGAAACAATAGCGATTTGTTCTAATTGTGCCATGTTTTGACAGCTATTTGACAACACTATTGTAATAGTTCTATTGTTTACTTGAGTTTTAGTTTCTTGTAATACATGTTGTCAGAAGTGCTTTAGTTCAAATGGATTACATCAGCGGTACTATGGATTACAAAAGTGTTATTAACAATGTTTTAGTTCAAATTTTCTTAAGACACGTTTGAAATTTGTGTTGTCAATCGCATATTGCATAAAATAGCAGTTTGTTCAAATTCCGCCACAATAAAGTGTTATAGCGCCGCTATAGTCGCTATTTGACAACACTTTGTACTAAATAGTGTATTGTGAAACAATAACAATTTGTTCAAAAATTGTGTGATGCTATAGTAGCTATTTGACAATAACACTGTTGTAATCCATTGCTTTAGTTCAAAATTTGTTGATTAAGTTTTAGTTTCTTGTATCCCTTTATGATAACTCAGTGATGAATTGTCAATTGCGATAGTTGAATTAAGTTTTAGTTTCTTGTCATAGTTTAAGTAAGATTGTTGTGATTTGAATTTTATGTGAAATTCAGTTTTGTATCATTTGAATTTTCAACCTAAAATGTTATTGATGATACAATTGATTATTTTACACAAGTGTTAGCTTCTTCTATCTCCTGGGAGAGTGATTAGTGATAGTATTAGGATATGGAATCTCAGTGATGAATTGTGATAGTTAAATTACGTTTTGGTTTCTTGTGATAGTTTACTTAAGATTGCTGTGTTTGAGTTTTATGCGAAATTCAGTTTTTACATCATTCCAAATTTTCAACCTAAAATGTTATGGATGATGCATTTGGTTATTTTACATAAGTGTTAGCTTCTTGTGGCTCTTAGGCGAATGATTAATGTTATGGAACCTCGGTAGTGAACTATGATAATCTAATTAAGTTTTAGTCTCTTGTGATAGTCTTGTTAAGATTGTTGCGATTTGAATATTATGTGAATTTCAGTTTTTGCATCATTCCAAAATTTCAACCTAAAACATTGTAGATGATGCATTTGGTTACTTTACATAAGTGTTATCTTCTTTGGTCACTTGACAAATGATGAGTGATATGTAACTTCAGTGAAGAATTGTGGTAGTTGAATTAAGTTTTAGTTTTTTGTGATAGTTTAATTAAGATTGTTGCGATTTGAATTTTATGTGAATTTCGTTGTTTGCATCATTCCAATTTTCACCCTAAACATTATAGATGATACATTAGAGCTTATGGATGTTTAAGAGTTGAAAGAATGTTACAGATGAAATGCATCATAACTGACTTTAGGTTTATTCTCTAAACTTGATTTCTGTGCTTCTGTGTTTGTTTTTCCTTGTACAGGATTATTATGGTGCTTAACATGGAAACCATAATACCTGATTGTGAAATCATTGGGAATCCAAAGTCATTTGTGGATTCAGAGTTACCAGTTCAGAAAGCATTGCCTGATAACACTGTGGCTGGTTCGTCCAGAAATATTAATAATAATTTGGCTGCTCAAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCAATACCAACCTCCTCCGCTTTACAACAAAAATTTGGCTGCTCCAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCCATACCAACCTCCTCCGCTTTACAAAGGTCGTGGTGCAGTTATGAAAAATGAGGCGCCAGCACGTGTAATACCTATAGCTGCTTTAAATCCCTATCAGGGTAGGTGGGCCATCAAGGCAAGGGTTACTGCAAAAGGAGATTTGCGCCGCTATAACAATGCTCGTGGAGATGGAAAAGTCTTCTCGTTTGATCTCCTTGATTCCGATGGAGGTGAAATACGGGTAACTTGCTTTAATGCTGTTGTTGACCGTTTCTATGAAGCAATTGAGGTTGGTAAAGTTTACTTGATATCGAAAGGTAGCTTGAAACCTGCACAGAAGAATTTCAATCATTTGAAGAATGAATGGGAAATTATGCTGGATTTAAATTCAACGGTTGAGCTTTGCCCAGATGAGGATGGTTCTATACCTAGACAACAATTCTCCTTCAGACCTATCAGTGACATTGAGACTGTTGAGAGTAATGCTATCCTTGATGTTATTGGGGTTGTGACATCTGTAAATCCTTCAGTTCCCATCGTAAGGAAGAATGGAATGGAAACACTGAGAAGGGTTTTGAATCTAAAGGACAATTCTGGCAAGAGTGTTGAGCTAACACTTTGGGGTGAATTCTGCAACAGGGAAGGACAAAAGCTTCAAGAGATGGTGGATGCTGGGGTTTTCCCCATTTTAGCAGTAAAGGCTGGTAAGGTTAATGAATTCAGTGGAAAGTCTATAGGCTCTATTTCTACTACACAGCTTTTCATAAATCCAGATTTCCCTGAGGCTCAGACCTTAAGAACCTGGTTTGATCAAGTTGGGAAAGATTCTGCTTCTCTATCCATTTCTAAGGACATCACTCATGGGGGACCCAAGAATGAGATACGCAAAACTGTGTCTCAAATTAAAGATGAAGGTCTAGGGCGTTCAGGCAAGCCAGACTGGATAACAATGAGGGCAACCGTATCATTCATGAGGACCGATACATTTTGTTACACAGCTTGCCCTCTGATGATTGGAGATCGACCGTGCAATAAGAAAGTGACGAAGTCAGGAGACACAAAATGGCAGTGTGATAGATGCAACCAGGAGTTTGAGGAATGTGATTATCGTTACCTTCTCCAAGCTCAAATCCAGGATCATTCAGGATTAACTTGGGTAACTGCTTTCCAGGAAGCAGGGGAGGAGATTATGGGGTACTCAGCAAAAGATCTGTATGTGTTGAAGTATGAACAGGAGGATGATGAGAAGTTTGGAGATATAATTAAGAGTAGACTCTTCAATGAGTTTGTGTTTAGGCTGAAAATCAAAGAGGAATTATATAATGACGAACAGAAGGTGAAGATTACAGTAGTTAAGGCAGATAAGGTGAATTATTCTGCAGAGAGTAGGTACATGCTTGATTTTATTTCCAAGTTCCGTAGGCAGTGA
Protein sequence

>MS.gene051178.t1

MAVNLTANAIPAIIAGDVNAKPLLQVLDIATIVSTKNSHQQRYRLLLSDAVSSHHAMLAAQLNDRVNTGRVKQGSIVQLLDYICTPLQNRKIIMVLNMETIIPDCEIIGNPKSFVDSELPVQKALPDNTVAGSSRNINNNLAAQNAGSNGQNFRPTVQPQYQPPPLYNKNLAAPNAGSNGQNFRPTVQPPYQPPPLYKGRGAVMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEAIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSIPRQQFSFRPISDIETVESNAILDVIGVVTSVNPSVPIVRKNGMETLRRVLNLKDNSGKSVELTLWGEFCNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQTLRTWFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIKDEGLGRSGKPDWITMRATVSFMRTDTFCYTACPLMIGDRPCNKKVTKSGDTKWQCDRCNQEFEECDYRYLLQAQIQDHSGLTWVTAFQEAGEEIMGYSAKDLYVLKYEQEDDEKFGDIIKSRLFNEFVFRLKIKEELYNDEQKVKITVVKADKVNYSAESRYMLDFISKFRRQ